Query 010794
Match_columns 501
No_of_seqs 495 out of 3535
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 14:24:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.5E-49 5.3E-54 394.6 42.7 297 146-500 101-410 (410)
2 1nr0_A Actin interacting prote 100.0 3.6E-48 1.2E-52 404.5 47.8 332 144-500 50-521 (611)
3 3ow8_A WD repeat-containing pr 100.0 4.5E-48 1.6E-52 371.0 42.8 289 147-500 26-320 (321)
4 1r5m_A SIR4-interacting protei 100.0 1.2E-47 4.2E-52 381.7 44.8 333 151-500 43-424 (425)
5 1got_B GT-beta; complex (GTP-b 100.0 2E-47 6.9E-52 369.8 44.5 287 144-498 46-340 (340)
6 1nr0_A Actin interacting prote 100.0 2.6E-47 8.9E-52 398.0 46.6 327 146-500 140-566 (611)
7 2ymu_A WD-40 repeat protein; u 100.0 9.1E-47 3.1E-51 391.6 49.8 325 142-498 251-577 (577)
8 2ynn_A Coatomer subunit beta'; 100.0 9.1E-47 3.1E-51 359.3 42.9 290 145-499 5-300 (304)
9 2pbi_B Guanine nucleotide-bind 100.0 1.5E-46 5.2E-51 365.6 43.3 288 144-457 55-354 (354)
10 3frx_A Guanine nucleotide-bind 100.0 2E-45 6.8E-50 352.5 44.9 289 147-500 11-316 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.5E-46 2.6E-50 359.5 41.5 295 145-500 7-334 (345)
12 4gqb_B Methylosome protein 50; 100.0 2.3E-46 7.9E-51 362.1 37.7 293 151-500 28-330 (344)
13 4g56_B MGC81050 protein; prote 100.0 2.6E-46 9.1E-51 364.2 37.3 288 150-500 39-342 (357)
14 2ymu_A WD-40 repeat protein; u 100.0 6.7E-45 2.3E-49 377.6 49.8 326 142-499 210-537 (577)
15 3iz6_a 40S ribosomal protein R 100.0 7.1E-47 2.4E-51 371.7 33.0 292 145-462 58-377 (380)
16 2hes_X YDR267CP; beta-propelle 100.0 2E-45 6.7E-50 354.3 40.5 296 145-500 6-327 (330)
17 2xzm_R RACK1; ribosome, transl 100.0 6.1E-44 2.1E-48 345.8 42.6 295 145-500 13-339 (343)
18 1erj_A Transcriptional repress 100.0 1.5E-43 5.1E-48 349.7 44.8 298 151-500 62-388 (393)
19 4ery_A WD repeat-containing pr 100.0 2.9E-43 9.8E-48 336.3 45.3 289 145-500 15-311 (312)
20 1gxr_A ESG1, transducin-like e 100.0 1.3E-43 4.4E-48 341.6 42.6 321 152-501 8-337 (337)
21 2pm9_A Protein WEB1, protein t 100.0 5.2E-46 1.8E-50 369.6 25.7 325 152-500 11-413 (416)
22 2pbi_B Guanine nucleotide-bind 100.0 2.7E-43 9.3E-48 342.6 43.9 280 210-498 62-354 (354)
23 4aow_A Guanine nucleotide-bind 100.0 6.7E-43 2.3E-47 337.3 42.3 294 146-462 31-339 (340)
24 3iz6_a 40S ribosomal protein R 100.0 5.6E-44 1.9E-48 351.0 34.1 282 210-500 64-374 (380)
25 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.3E-42 1.5E-46 345.1 45.8 317 146-500 111-441 (445)
26 1pgu_A Actin interacting prote 100.0 5.4E-42 1.9E-46 358.1 45.3 328 144-500 151-613 (615)
27 3dm0_A Maltose-binding peripla 100.0 3.8E-42 1.3E-46 364.7 43.3 293 147-500 376-692 (694)
28 3zwl_B Eukaryotic translation 100.0 2.8E-41 9.5E-46 329.3 45.0 297 146-500 25-345 (369)
29 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-42 1.3E-46 372.2 38.9 332 148-500 12-518 (902)
30 1pgu_A Actin interacting prote 100.0 5.9E-41 2E-45 350.2 45.5 345 144-500 54-571 (615)
31 3vl1_A 26S proteasome regulato 100.0 3.8E-42 1.3E-46 342.4 34.7 320 154-500 57-418 (420)
32 3ei3_B DNA damage-binding prot 100.0 1.1E-41 3.8E-46 335.0 36.6 285 146-500 66-381 (383)
33 3v7d_B Cell division control p 100.0 1.5E-40 5.1E-45 335.5 44.2 319 146-499 114-461 (464)
34 3mkq_A Coatomer beta'-subunit; 100.0 6.2E-41 2.1E-45 361.9 44.1 327 146-500 6-385 (814)
35 3ow8_A WD repeat-containing pr 100.0 4.4E-41 1.5E-45 322.4 37.6 246 147-459 74-320 (321)
36 1sq9_A Antiviral protein SKI8; 100.0 3.6E-41 1.2E-45 332.7 36.4 295 146-462 9-397 (397)
37 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-40 5.6E-45 374.6 46.8 336 146-500 608-1073(1249)
38 4gqb_B Methylosome protein 50; 100.0 5.6E-41 1.9E-45 324.3 36.9 252 150-463 79-334 (344)
39 2oaj_A Protein SNI1; WD40 repe 100.0 7.4E-41 2.5E-45 362.2 40.9 333 146-499 92-659 (902)
40 3k26_A Polycomb protein EED; W 100.0 2.3E-41 8E-46 329.7 32.4 293 147-500 12-365 (366)
41 3sfz_A APAF-1, apoptotic pepti 100.0 5.2E-42 1.8E-46 386.8 31.0 343 145-499 874-1247(1249)
42 2j04_B YDR362CP, TAU91; beta p 100.0 3.6E-42 1.2E-46 349.4 26.4 323 152-501 132-517 (524)
43 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-40 4.7E-45 325.3 36.4 290 149-500 4-360 (372)
44 3odt_A Protein DOA1; ubiquitin 100.0 4.5E-40 1.5E-44 313.5 38.6 289 144-468 9-304 (313)
45 2pm7_B Protein transport prote 100.0 2.7E-40 9.4E-45 313.4 35.7 254 146-459 2-284 (297)
46 4aow_A Guanine nucleotide-bind 100.0 6.5E-39 2.2E-43 309.4 45.6 282 208-500 34-336 (340)
47 4e54_B DNA damage-binding prot 100.0 6.1E-41 2.1E-45 335.6 31.2 287 147-500 113-429 (435)
48 1sq9_A Antiviral protein SKI8; 100.0 8.6E-40 3E-44 322.8 39.1 281 208-500 12-394 (397)
49 3i2n_A WD repeat-containing pr 100.0 2.9E-40 9.8E-45 321.0 34.2 293 146-463 11-356 (357)
50 4a11_B DNA excision repair pro 100.0 4.5E-39 1.5E-43 318.3 42.0 342 145-500 35-404 (408)
51 2ynn_A Coatomer subunit beta'; 100.0 1.3E-39 4.5E-44 309.8 36.6 248 245-500 5-258 (304)
52 1got_B GT-beta; complex (GTP-b 100.0 2.5E-39 8.6E-44 313.0 38.8 244 210-500 53-300 (340)
53 3dw8_B Serine/threonine-protei 100.0 5.8E-40 2E-44 329.3 35.1 298 151-500 26-445 (447)
54 1gxr_A ESG1, transducin-like e 100.0 1.6E-38 5.5E-43 305.9 43.6 286 148-458 46-335 (337)
55 1vyh_C Platelet-activating fac 100.0 1E-39 3.5E-44 323.9 36.0 248 244-500 99-368 (410)
56 3dwl_C Actin-related protein 2 100.0 2.7E-41 9.3E-46 331.3 23.5 288 148-499 6-377 (377)
57 2pm7_B Protein transport prote 100.0 3.1E-39 1.1E-43 306.2 34.6 252 210-500 7-284 (297)
58 4g56_B MGC81050 protein; prote 100.0 1.5E-39 5.1E-44 316.5 33.1 252 148-461 89-344 (357)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.6E-39 1.2E-43 312.4 35.7 256 148-466 56-341 (345)
60 3frx_A Guanine nucleotide-bind 100.0 1.7E-38 5.7E-43 304.3 39.1 248 207-500 12-266 (319)
61 4aez_A CDC20, WD repeat-contai 100.0 1E-38 3.5E-43 315.9 38.4 288 146-500 84-379 (401)
62 3odt_A Protein DOA1; ubiquitin 100.0 3.9E-38 1.3E-42 300.1 40.2 274 209-500 15-295 (313)
63 3bg1_A Protein SEC13 homolog; 100.0 7E-40 2.4E-44 313.5 27.9 255 147-459 7-292 (316)
64 3gre_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 329.5 27.3 309 160-498 34-437 (437)
65 2hes_X YDR267CP; beta-propelle 100.0 8.5E-39 2.9E-43 307.9 33.1 255 147-460 50-328 (330)
66 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-38 8.8E-43 341.5 39.7 325 144-498 46-420 (814)
67 1yfq_A Cell cycle arrest prote 100.0 2.2E-38 7.6E-43 306.0 34.7 282 148-457 6-321 (342)
68 2pm9_A Protein WEB1, protein t 100.0 1.7E-39 5.9E-44 322.5 27.5 279 214-500 14-336 (416)
69 3f3f_A Nucleoporin SEH1; struc 100.0 2.2E-38 7.6E-43 305.8 33.5 303 147-467 5-344 (351)
70 2xzm_R RACK1; ribosome, transl 100.0 2.5E-38 8.6E-43 306.3 33.7 247 145-461 68-341 (343)
71 4h5i_A Guanine nucleotide-exch 100.0 5.1E-39 1.8E-43 313.6 28.8 289 154-461 15-344 (365)
72 3gre_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 320.5 30.5 292 141-457 50-437 (437)
73 4gga_A P55CDC, cell division c 100.0 4.4E-37 1.5E-41 306.1 41.6 275 214-500 107-394 (420)
74 3i2n_A WD repeat-containing pr 100.0 4.5E-38 1.5E-42 305.5 33.6 281 210-500 16-352 (357)
75 3mmy_A MRNA export factor; mRN 100.0 8.5E-38 2.9E-42 304.5 35.2 293 141-459 27-345 (368)
76 1erj_A Transcriptional repress 100.0 1.5E-37 5.2E-42 306.6 37.0 249 152-460 122-389 (393)
77 1r5m_A SIR4-interacting protei 100.0 1.8E-37 6.1E-42 308.3 37.0 278 211-500 44-360 (425)
78 3bg1_A Protein SEC13 homolog; 100.0 1.8E-38 6E-43 303.7 28.3 253 209-500 10-292 (316)
79 4gga_A P55CDC, cell division c 100.0 2.2E-36 7.5E-41 301.1 42.0 298 141-465 89-400 (420)
80 1p22_A F-BOX/WD-repeat protein 100.0 2.3E-37 8E-42 309.6 34.9 293 148-479 128-433 (435)
81 4ggc_A P55CDC, cell division c 100.0 6.1E-36 2.1E-40 285.7 41.4 276 215-500 28-314 (318)
82 3v7d_B Cell division control p 100.0 1.8E-36 6E-41 305.7 39.4 269 215-500 125-420 (464)
83 3vl1_A 26S proteasome regulato 100.0 7.3E-38 2.5E-42 311.5 28.1 284 214-500 58-364 (420)
84 2j04_B YDR362CP, TAU91; beta p 100.0 8.1E-38 2.8E-42 317.4 28.0 294 147-460 201-517 (524)
85 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-36 7.1E-41 302.7 36.7 268 211-500 132-413 (435)
86 3jrp_A Fusion protein of prote 100.0 1.3E-36 4.5E-41 297.5 34.2 252 146-460 4-287 (379)
87 4ggc_A P55CDC, cell division c 100.0 2.4E-35 8.1E-40 281.6 41.6 294 141-461 9-316 (318)
88 2j04_A TAU60, YPL007P, hypothe 100.0 4.2E-38 1.4E-42 312.1 22.2 300 151-490 13-350 (588)
89 1yfq_A Cell cycle arrest prote 100.0 1.4E-36 4.9E-41 293.3 32.1 269 210-493 9-315 (342)
90 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-35 5.6E-40 297.1 40.7 280 144-460 150-442 (445)
91 4h5i_A Guanine nucleotide-exch 100.0 1.2E-36 4E-41 297.0 31.1 276 212-500 14-342 (365)
92 4ery_A WD repeat-containing pr 100.0 1.7E-35 5.7E-40 282.5 37.4 247 245-500 15-267 (312)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5E-35 1.7E-39 294.0 39.8 300 153-500 4-390 (450)
94 4a11_B DNA excision repair pro 100.0 3.5E-35 1.2E-39 290.3 37.9 281 210-500 41-364 (408)
95 3dm0_A Maltose-binding peripla 100.0 2.6E-35 8.8E-40 312.3 36.7 244 208-500 378-631 (694)
96 4e54_B DNA damage-binding prot 100.0 3.8E-36 1.3E-40 300.7 26.7 264 146-463 157-433 (435)
97 1k8k_C P40, ARP2/3 complex 41 100.0 5.7E-35 2E-39 285.3 33.6 241 211-500 7-273 (372)
98 3jrp_A Fusion protein of prote 100.0 4.1E-35 1.4E-39 286.9 31.6 256 245-500 3-286 (379)
99 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-34 6E-39 280.6 35.8 273 209-500 16-335 (355)
100 3ei3_B DNA damage-binding prot 100.0 7E-35 2.4E-39 286.4 31.9 246 150-460 115-382 (383)
101 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-34 7.9E-39 277.6 34.8 248 247-500 5-336 (351)
102 3dwl_C Actin-related protein 2 100.0 1.9E-36 6.4E-41 296.9 20.3 239 212-499 11-279 (377)
103 3mmy_A MRNA export factor; mRN 100.0 2.3E-34 7.7E-39 280.2 33.3 279 209-496 36-341 (368)
104 3dw8_B Serine/threonine-protei 100.0 1.8E-35 6E-40 296.6 26.1 274 211-500 27-372 (447)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 5.4E-35 1.8E-39 289.3 29.2 275 215-500 37-341 (402)
106 3jro_A Fusion protein of prote 100.0 2.4E-35 8E-40 314.6 27.1 251 147-460 3-285 (753)
107 2xyi_A Probable histone-bindin 100.0 3.3E-34 1.1E-38 286.2 33.6 262 147-461 122-411 (430)
108 4aez_A CDC20, WD repeat-contai 100.0 6.9E-34 2.4E-38 281.3 35.2 247 151-467 132-387 (401)
109 3lrv_A PRE-mRNA-splicing facto 100.0 3.5E-35 1.2E-39 284.2 24.7 263 160-497 43-329 (343)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 9.3E-35 3.2E-39 287.6 28.1 286 155-463 36-345 (402)
111 3vu4_A KMHSV2; beta-propeller 100.0 3.2E-34 1.1E-38 278.8 31.2 279 146-460 12-336 (355)
112 3k26_A Polycomb protein EED; W 100.0 1.7E-34 5.8E-39 281.1 28.3 266 152-459 68-365 (366)
113 3bws_A Protein LP49; two-domai 100.0 1.8E-32 6.2E-37 273.7 42.9 277 213-500 123-431 (433)
114 2xyi_A Probable histone-bindin 100.0 1.6E-33 5.5E-38 281.2 33.9 246 247-500 122-409 (430)
115 3zwl_B Eukaryotic translation 100.0 2E-32 6.8E-37 266.6 37.7 245 246-500 25-303 (369)
116 3jro_A Fusion protein of prote 100.0 5.7E-34 1.9E-38 304.0 27.5 253 209-500 6-284 (753)
117 4gq1_A NUP37; propeller, trans 100.0 4.6E-34 1.6E-38 281.6 23.7 233 215-498 92-386 (393)
118 4gq1_A NUP37; propeller, trans 100.0 9.7E-34 3.3E-38 279.3 25.2 282 148-458 84-387 (393)
119 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-33 4.1E-38 280.3 22.1 257 212-499 15-295 (588)
120 2w18_A PALB2, fancn, partner a 100.0 3E-31 1E-35 247.5 34.2 288 156-500 42-356 (356)
121 3lrv_A PRE-mRNA-splicing facto 100.0 9.7E-33 3.3E-37 267.1 24.1 235 219-500 43-291 (343)
122 1l0q_A Surface layer protein; 100.0 8.2E-30 2.8E-34 250.8 43.6 273 166-470 3-285 (391)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.7E-31 1.9E-35 264.4 34.3 237 213-499 5-337 (450)
124 1l0q_A Surface layer protein; 100.0 1E-29 3.5E-34 250.2 39.1 263 225-500 3-274 (391)
125 2w18_A PALB2, fancn, partner a 100.0 3.8E-31 1.3E-35 246.8 24.6 187 223-458 144-355 (356)
126 3bws_A Protein LP49; two-domai 100.0 1.2E-29 4.2E-34 253.1 36.9 286 148-460 118-432 (433)
127 1nir_A Nitrite reductase; hemo 100.0 5E-29 1.7E-33 254.8 38.1 312 160-500 144-513 (543)
128 2ecf_A Dipeptidyl peptidase IV 100.0 1.6E-28 5.5E-33 262.2 33.4 334 153-499 36-457 (741)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-28 4E-33 244.5 29.2 301 152-482 61-409 (415)
130 1k32_A Tricorn protease; prote 100.0 9.4E-27 3.2E-31 257.3 33.0 322 144-500 43-460 (1045)
131 1k32_A Tricorn protease; prote 100.0 2.2E-26 7.6E-31 254.3 33.1 337 145-498 91-499 (1045)
132 1nir_A Nitrite reductase; hemo 99.9 2.3E-25 7.7E-30 227.8 33.1 295 146-471 172-525 (543)
133 2z3z_A Dipeptidyl aminopeptida 99.9 1.6E-25 5.4E-30 237.7 31.9 321 156-500 28-434 (706)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.1E-26 2.8E-30 224.0 26.2 272 214-499 64-385 (415)
135 1xfd_A DIP, dipeptidyl aminope 99.9 8E-26 2.7E-30 240.6 26.5 312 156-490 19-429 (723)
136 3vgz_A Uncharacterized protein 99.9 4E-23 1.4E-27 199.8 37.5 268 213-491 41-334 (353)
137 3u4y_A Uncharacterized protein 99.9 2.1E-23 7.1E-28 200.1 35.1 270 220-500 5-303 (331)
138 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-24 4.5E-29 231.9 29.3 277 212-500 36-412 (741)
139 2ojh_A Uncharacterized protein 99.9 2.1E-24 7.1E-29 202.8 25.6 253 229-492 17-293 (297)
140 1ri6_A Putative isomerase YBHE 99.9 2.1E-23 7.3E-28 200.7 33.0 291 167-483 7-335 (343)
141 3u4y_A Uncharacterized protein 99.9 2.5E-23 8.6E-28 199.5 33.1 276 160-463 4-307 (331)
142 1ri6_A Putative isomerase YBHE 99.9 1.6E-23 5.5E-28 201.5 30.2 265 226-500 7-307 (343)
143 2ojh_A Uncharacterized protein 99.9 1.4E-23 4.7E-28 197.2 26.9 241 144-451 32-293 (297)
144 2z3z_A Dipeptidyl aminopeptida 99.9 2.9E-23 1E-27 220.3 31.2 278 154-462 82-437 (706)
145 3o4h_A Acylamino-acid-releasin 99.9 7E-24 2.4E-28 219.9 25.1 266 212-498 21-312 (582)
146 1xfd_A DIP, dipeptidyl aminope 99.9 4E-24 1.4E-28 227.5 23.6 275 214-500 18-392 (723)
147 1pby_B Quinohemoprotein amine 99.9 1.3E-22 4.4E-27 194.7 30.1 270 225-500 2-309 (337)
148 3vgz_A Uncharacterized protein 99.9 2.5E-21 8.6E-26 187.1 35.8 271 152-451 39-335 (353)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 5.3E-22 1.8E-26 197.4 30.7 253 153-458 36-331 (434)
150 1pby_B Quinohemoprotein amine 99.9 8.1E-22 2.8E-26 189.1 29.9 273 166-470 2-320 (337)
151 1z68_A Fibroblast activation p 99.9 2.2E-22 7.5E-27 214.0 26.2 314 158-499 20-441 (719)
152 3hfq_A Uncharacterized protein 99.9 7.5E-21 2.6E-25 183.7 34.2 249 213-500 40-316 (347)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 2.9E-22 1E-26 199.2 24.3 245 213-498 37-330 (434)
154 3o4h_A Acylamino-acid-releasin 99.9 9.6E-22 3.3E-26 203.8 26.8 267 153-460 21-315 (582)
155 3hfq_A Uncharacterized protein 99.9 6.6E-21 2.3E-25 184.1 30.8 252 151-465 37-324 (347)
156 3scy_A Hypothetical bacterial 99.9 5.2E-20 1.8E-24 178.8 34.6 268 225-500 14-336 (361)
157 3pe7_A Oligogalacturonate lyas 99.9 1E-20 3.6E-25 185.5 29.5 310 145-500 22-381 (388)
158 1jmx_B Amine dehydrogenase; ox 99.9 1.3E-20 4.3E-25 181.8 29.1 274 158-471 4-336 (349)
159 1jmx_B Amine dehydrogenase; ox 99.9 2E-20 6.7E-25 180.4 28.5 269 218-500 5-324 (349)
160 4a5s_A Dipeptidyl peptidase 4 99.9 9.1E-21 3.1E-25 201.9 27.0 286 155-499 18-396 (740)
161 1z68_A Fibroblast activation p 99.9 1.8E-21 6E-26 207.0 19.5 272 217-500 20-390 (719)
162 3scy_A Hypothetical bacterial 99.9 4.5E-19 1.5E-23 172.2 34.5 257 212-479 49-360 (361)
163 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.8E-18 1.3E-22 166.0 32.9 265 226-500 4-340 (365)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 9.9E-19 3.4E-23 170.1 28.6 248 152-462 38-343 (365)
165 2oiz_A Aromatic amine dehydrog 99.8 9.3E-19 3.2E-23 169.8 28.0 289 164-483 14-360 (361)
166 3azo_A Aminopeptidase; POP fam 99.8 6.4E-19 2.2E-23 185.4 28.4 281 148-499 18-365 (662)
167 3c5m_A Oligogalacturonate lyas 99.8 6E-19 2.1E-23 173.2 24.2 271 215-499 38-380 (396)
168 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-17 5.5E-22 159.1 31.5 247 212-500 23-321 (329)
169 1q7f_A NHL, brain tumor CG1071 99.8 4.6E-17 1.6E-21 152.5 33.6 236 211-500 28-279 (286)
170 3fvz_A Peptidyl-glycine alpha- 99.8 1.8E-17 6.1E-22 158.7 29.5 249 153-459 23-321 (329)
171 1q7f_A NHL, brain tumor CG1071 99.8 8.2E-17 2.8E-21 150.8 33.2 247 151-461 27-281 (286)
172 3c5m_A Oligogalacturonate lyas 99.8 8.1E-18 2.8E-22 165.1 23.5 277 155-462 37-386 (396)
173 4a5s_A Dipeptidyl peptidase 4 99.8 2.1E-17 7.3E-22 175.9 26.0 318 146-498 49-446 (740)
174 2dg1_A DRP35, lactonase; beta 99.8 1.4E-16 4.8E-21 152.6 29.2 266 213-491 6-300 (333)
175 1qks_A Cytochrome CD1 nitrite 99.8 1.3E-15 4.5E-20 155.2 36.9 310 163-500 165-537 (567)
176 2gop_A Trilobed protease; beta 99.8 3.5E-16 1.2E-20 150.7 30.7 259 154-463 15-333 (347)
177 2gop_A Trilobed protease; beta 99.8 2.7E-16 9.3E-21 151.5 29.0 255 214-499 16-329 (347)
178 3e5z_A Putative gluconolactona 99.8 6.5E-16 2.2E-20 145.4 28.3 233 213-498 28-283 (296)
179 2z2n_A Virginiamycin B lyase; 99.8 7.9E-14 2.7E-18 130.9 42.1 279 150-500 11-294 (299)
180 2oiz_A Aromatic amine dehydrog 99.7 1.7E-15 5.7E-20 146.8 30.7 270 147-442 45-360 (361)
181 3azo_A Aminopeptidase; POP fam 99.7 2E-16 6.8E-21 166.4 25.3 236 211-499 22-321 (662)
182 2dg1_A DRP35, lactonase; beta 99.7 1.8E-15 6E-20 144.9 27.7 265 154-450 6-300 (333)
183 2xdw_A Prolyl endopeptidase; a 99.7 2.7E-15 9.1E-20 159.0 31.3 253 213-499 125-412 (710)
184 3pe7_A Oligogalacturonate lyas 99.7 3.8E-16 1.3E-20 152.9 21.6 247 243-500 20-328 (388)
185 2xdw_A Prolyl endopeptidase; a 99.7 3.2E-15 1.1E-19 158.4 29.9 244 151-462 122-416 (710)
186 3e5z_A Putative gluconolactona 99.7 1.5E-14 5E-19 136.2 28.9 260 145-463 19-289 (296)
187 1rwi_B Serine/threonine-protei 99.7 1.6E-14 5.6E-19 133.6 27.1 235 255-500 25-263 (270)
188 2bkl_A Prolyl endopeptidase; m 99.7 1.5E-15 5.2E-20 160.5 21.8 245 150-421 117-400 (695)
189 3dsm_A Uncharacterized protein 99.7 3.4E-14 1.1E-18 135.8 28.8 279 173-478 15-319 (328)
190 2bkl_A Prolyl endopeptidase; m 99.7 3.3E-15 1.1E-19 157.9 22.8 238 212-499 120-395 (695)
191 3no2_A Uncharacterized protein 99.7 6.8E-14 2.3E-18 129.9 28.6 242 164-470 4-262 (276)
192 1rwi_B Serine/threonine-protei 99.7 2.8E-14 9.4E-19 132.1 26.1 239 214-462 25-266 (270)
193 3no2_A Uncharacterized protein 99.7 5.2E-14 1.8E-18 130.7 26.8 213 222-489 3-231 (276)
194 2qc5_A Streptogramin B lactona 99.6 3.2E-12 1.1E-16 119.9 38.0 271 213-500 20-299 (300)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.2E-13 7.5E-18 129.0 29.8 238 214-500 19-298 (314)
196 3dsm_A Uncharacterized protein 99.6 3.8E-13 1.3E-17 128.5 30.6 253 232-499 15-300 (328)
197 3sjl_D Methylamine dehydrogena 99.6 2.3E-13 7.7E-18 130.4 28.0 291 161-481 40-384 (386)
198 2qc5_A Streptogramin B lactona 99.6 7.1E-12 2.4E-16 117.5 37.2 275 152-458 18-298 (300)
199 1qks_A Cytochrome CD1 nitrite 99.6 1.9E-12 6.6E-17 131.9 35.2 267 222-500 165-476 (567)
200 2mad_H Methylamine dehydrogena 99.6 3.5E-12 1.2E-16 123.6 35.0 275 161-467 28-357 (373)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1E-12 3.4E-17 124.4 30.5 246 149-460 13-299 (314)
202 1yr2_A Prolyl oligopeptidase; 99.6 1.9E-13 6.6E-18 145.3 27.4 266 222-499 116-439 (741)
203 2z2n_A Virginiamycin B lyase; 99.6 9.1E-12 3.1E-16 116.7 35.5 234 213-499 15-253 (299)
204 2mad_H Methylamine dehydrogena 99.6 4.8E-11 1.6E-15 115.6 36.7 263 221-500 29-349 (373)
205 3g4e_A Regucalcin; six bladed 99.6 7.3E-12 2.5E-16 117.7 29.9 228 215-490 15-261 (297)
206 1yr2_A Prolyl oligopeptidase; 99.5 1E-12 3.5E-17 139.8 24.7 239 213-463 163-444 (741)
207 3hrp_A Uncharacterized protein 99.5 1.7E-11 5.7E-16 120.5 31.4 234 254-499 131-408 (409)
208 3c75_H MADH, methylamine dehyd 99.5 1E-11 3.5E-16 121.1 27.0 290 163-481 82-423 (426)
209 3hrp_A Uncharacterized protein 99.5 2.3E-11 7.8E-16 119.5 29.5 233 213-458 131-408 (409)
210 2ghs_A AGR_C_1268P; regucalcin 99.5 6.6E-11 2.2E-15 112.7 30.8 225 215-491 51-292 (326)
211 1xip_A Nucleoporin NUP159; bet 99.5 1.9E-12 6.3E-17 124.6 18.3 182 255-489 39-232 (388)
212 3dr2_A Exported gluconolactona 99.5 4.6E-11 1.6E-15 112.7 26.9 230 214-498 46-303 (305)
213 3sjl_D Methylamine dehydrogena 99.4 5.1E-11 1.7E-15 114.2 26.8 267 219-500 39-362 (386)
214 2qe8_A Uncharacterized protein 99.4 8.9E-12 3E-16 119.7 20.9 256 213-491 17-311 (343)
215 3iuj_A Prolyl endopeptidase; h 99.4 6.3E-12 2.1E-16 132.5 20.9 247 212-499 128-403 (693)
216 1xip_A Nucleoporin NUP159; bet 99.4 4.9E-12 1.7E-16 121.7 17.8 166 214-391 39-226 (388)
217 3g4e_A Regucalcin; six bladed 99.4 2.8E-10 9.7E-15 106.8 29.6 227 151-448 10-260 (297)
218 3c75_H MADH, methylamine dehyd 99.4 6.8E-11 2.3E-15 115.3 25.4 264 222-500 82-401 (426)
219 3dr2_A Exported gluconolactona 99.4 1E-10 3.6E-15 110.2 24.7 238 142-454 33-301 (305)
220 3iuj_A Prolyl endopeptidase; h 99.4 5.3E-11 1.8E-15 125.4 24.8 242 150-421 125-408 (693)
221 2ghs_A AGR_C_1268P; regucalcin 99.4 8.2E-10 2.8E-14 105.1 30.4 219 155-448 50-290 (326)
222 3hxj_A Pyrrolo-quinoline quino 99.4 6.8E-11 2.3E-15 112.5 21.0 297 159-499 25-322 (330)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.3 2.2E-09 7.6E-14 104.2 31.7 304 164-498 52-375 (376)
224 2qe8_A Uncharacterized protein 99.3 1.3E-10 4.3E-15 111.6 22.0 269 154-457 17-318 (343)
225 2hz6_A Endoplasmic reticulum t 99.3 3E-14 1E-18 138.3 -3.7 257 223-500 8-278 (369)
226 1mda_H Methylamine dehydrogena 99.3 1.9E-10 6.6E-15 110.3 21.9 245 217-480 69-366 (368)
227 1kb0_A Quinohemoprotein alcoho 99.3 8.2E-10 2.8E-14 115.5 27.0 303 165-487 77-536 (677)
228 1yiq_A Quinohemoprotein alcoho 99.3 8.3E-10 2.9E-14 115.7 27.0 304 165-489 70-537 (689)
229 1kb0_A Quinohemoprotein alcoho 99.3 5.3E-10 1.8E-14 116.9 24.4 269 224-500 77-506 (677)
230 1yiq_A Quinohemoprotein alcoho 99.3 1.4E-09 4.7E-14 114.0 26.2 269 224-500 70-504 (689)
231 2hz6_A Endoplasmic reticulum t 99.2 8.4E-12 2.9E-16 121.0 8.1 203 264-484 8-217 (369)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.3E-08 1.1E-12 95.9 27.9 259 224-499 53-335 (376)
233 1mda_H Methylamine dehydrogena 99.1 4.8E-09 1.7E-13 100.6 20.5 243 235-500 47-345 (368)
234 1npe_A Nidogen, entactin; glyc 99.1 2E-07 6.9E-12 85.6 30.9 246 226-483 3-263 (267)
235 3hxj_A Pyrrolo-quinoline quino 99.1 1.6E-08 5.5E-13 95.9 22.6 218 224-460 107-324 (330)
236 4a2l_A BT_4663, two-component 99.1 3.7E-06 1.3E-10 90.0 43.0 310 156-500 175-525 (795)
237 2ece_A 462AA long hypothetical 99.1 7.8E-08 2.7E-12 92.8 26.6 219 263-489 93-399 (462)
238 4a2l_A BT_4663, two-component 99.1 7.5E-06 2.6E-10 87.6 44.1 314 153-499 214-569 (795)
239 1kv9_A Type II quinohemoprotei 99.0 1E-07 3.6E-12 99.5 24.6 269 224-500 66-487 (668)
240 2iwa_A Glutamine cyclotransfer 98.9 1.9E-07 6.6E-12 84.6 22.3 193 256-460 23-237 (266)
241 1kv9_A Type II quinohemoprotei 98.9 7.3E-07 2.5E-11 93.1 29.4 307 165-490 66-521 (668)
242 2iwa_A Glutamine cyclotransfer 98.9 7.3E-07 2.5E-11 80.8 24.3 190 298-500 23-236 (266)
243 2fp8_A Strictosidine synthase; 98.9 1.1E-06 3.7E-11 83.2 26.6 236 215-500 21-312 (322)
244 2ad6_A Methanol dehydrogenase 98.9 1.2E-06 4.2E-11 89.5 28.4 262 224-488 115-524 (571)
245 3nol_A Glutamine cyclotransfer 98.9 6.2E-07 2.1E-11 80.3 22.1 179 256-448 45-243 (262)
246 1w6s_A Methanol dehydrogenase 98.9 1.1E-06 3.6E-11 90.0 26.9 269 225-500 63-502 (599)
247 2ad6_A Methanol dehydrogenase 98.9 8.9E-07 3.1E-11 90.5 26.4 229 265-500 115-493 (571)
248 2ece_A 462AA long hypothetical 98.8 4E-07 1.4E-11 87.9 21.7 183 307-499 97-350 (462)
249 3v9f_A Two-component system se 98.8 6.3E-05 2.1E-09 80.2 40.7 314 154-498 211-565 (781)
250 3v9f_A Two-component system se 98.8 3.7E-05 1.3E-09 82.0 38.8 322 154-498 258-608 (781)
251 1w6s_A Methanol dehydrogenase 98.8 2.8E-06 9.4E-11 86.9 28.5 258 227-488 124-534 (599)
252 2fp8_A Strictosidine synthase; 98.8 5.9E-06 2E-10 78.0 28.4 263 149-459 14-312 (322)
253 1fwx_A Nitrous oxide reductase 98.8 6.2E-07 2.1E-11 89.6 22.1 183 307-500 103-360 (595)
254 1npe_A Nidogen, entactin; glyc 98.8 1.5E-05 5.2E-10 72.9 30.1 223 266-499 2-236 (267)
255 2p4o_A Hypothetical protein; p 98.8 1.4E-05 4.8E-10 74.8 30.3 225 213-490 32-277 (306)
256 1flg_A Protein (quinoprotein e 98.8 4.8E-05 1.6E-09 77.8 35.8 80 408-488 465-547 (582)
257 1fwx_A Nitrous oxide reductase 98.8 6.5E-07 2.2E-11 89.5 20.6 216 263-489 99-406 (595)
258 2xbg_A YCF48-like protein; pho 98.7 7.9E-05 2.7E-09 70.4 33.3 266 213-498 36-319 (327)
259 3nok_A Glutaminyl cyclase; bet 98.7 2.2E-06 7.6E-11 76.7 20.9 179 255-448 56-253 (268)
260 1k3i_A Galactose oxidase precu 98.7 1.1E-06 3.7E-11 91.8 21.7 269 158-449 190-530 (656)
261 3mbr_X Glutamine cyclotransfer 98.7 7.4E-06 2.5E-10 72.7 23.7 181 254-448 21-222 (243)
262 3nok_A Glutaminyl cyclase; bet 98.7 7.2E-06 2.5E-10 73.4 23.3 177 299-489 58-253 (268)
263 3nol_A Glutamine cyclotransfer 98.7 4.9E-06 1.7E-10 74.5 21.9 178 299-490 46-244 (262)
264 3v64_C Agrin; beta propeller, 98.7 0.00013 4.4E-09 69.6 32.6 242 215-467 36-282 (349)
265 1flg_A Protein (quinoprotein e 98.6 1.9E-05 6.4E-10 80.8 27.0 229 265-500 117-515 (582)
266 3mbr_X Glutamine cyclotransfer 98.6 3E-05 1E-09 68.8 24.0 179 298-490 23-223 (243)
267 3v65_B Low-density lipoprotein 98.6 0.00011 3.7E-09 71.2 30.4 242 216-468 80-326 (386)
268 2xe4_A Oligopeptidase B; hydro 98.5 2.7E-05 9.2E-10 82.5 25.4 195 151-365 170-398 (751)
269 3tc9_A Hypothetical hydrolase; 98.5 0.00012 4E-09 72.0 28.3 237 214-500 138-429 (430)
270 1k3i_A Galactose oxidase precu 98.5 3.6E-05 1.2E-09 80.3 24.6 263 217-490 190-530 (656)
271 1ijq_A LDL receptor, low-densi 98.4 0.0012 3.9E-08 62.0 34.4 224 234-467 10-245 (316)
272 2p4o_A Hypothetical protein; p 98.4 0.00029 1E-08 65.7 28.0 217 154-391 32-270 (306)
273 3p5b_L Low density lipoprotein 98.4 0.0015 5.2E-08 63.4 32.9 233 226-468 85-328 (400)
274 2xe4_A Oligopeptidase B; hydro 98.4 3.1E-05 1E-09 82.1 22.1 224 214-488 175-441 (751)
275 3s94_A LRP-6, low-density lipo 98.4 0.0013 4.4E-08 67.7 32.9 328 152-499 38-421 (619)
276 4hw6_A Hypothetical protein, I 98.3 0.0002 7E-09 70.3 25.3 233 256-500 141-432 (433)
277 3v64_C Agrin; beta propeller, 98.3 0.0014 4.7E-08 62.4 30.5 228 258-498 38-272 (349)
278 1ijq_A LDL receptor, low-densi 98.3 0.0022 7.4E-08 60.1 31.8 220 267-498 3-235 (316)
279 3sov_A LRP-6, low-density lipo 98.3 0.0015 5.2E-08 61.1 30.1 226 233-467 12-245 (318)
280 2xbg_A YCF48-like protein; pho 98.3 0.0023 7.7E-08 60.3 34.1 272 154-457 36-319 (327)
281 3v65_B Low-density lipoprotein 98.3 0.00074 2.5E-08 65.3 27.8 222 266-498 88-315 (386)
282 3qqz_A Putative uncharacterize 98.2 0.0019 6.6E-08 57.9 27.4 200 248-458 21-251 (255)
283 3p5b_L Low density lipoprotein 98.2 0.0029 1E-07 61.4 30.1 221 267-498 85-317 (400)
284 4hw6_A Hypothetical protein, I 98.2 0.0034 1.2E-07 61.5 30.2 233 214-459 140-432 (433)
285 3m0c_C LDL receptor, low-densi 98.1 0.0038 1.3E-07 65.9 31.2 226 233-467 403-639 (791)
286 3kya_A Putative phosphatase; s 98.1 0.0054 1.9E-07 60.5 28.9 240 214-500 140-474 (496)
287 3amr_A 3-phytase; beta-propell 98.1 0.0026 8.8E-08 59.4 24.8 192 264-468 39-272 (355)
288 2ism_A Putative oxidoreductase 98.0 0.0038 1.3E-07 59.4 26.1 59 431-490 269-334 (352)
289 3sov_A LRP-6, low-density lipo 98.0 0.0078 2.7E-07 56.3 27.3 216 274-499 12-236 (318)
290 3amr_A 3-phytase; beta-propell 98.0 0.0025 8.4E-08 59.6 22.8 181 308-500 42-262 (355)
291 2p9w_A MAL S 1 allergenic prot 98.0 0.0008 2.7E-08 62.3 19.3 158 333-500 9-214 (334)
292 1n7d_A LDL receptor, low-densi 97.9 0.00012 4.2E-09 76.5 14.8 227 233-468 385-622 (699)
293 3kya_A Putative phosphatase; s 97.9 0.017 5.7E-07 57.1 28.5 113 156-283 141-277 (496)
294 3qqz_A Putative uncharacterize 97.9 0.0062 2.1E-07 54.6 23.3 190 297-497 28-249 (255)
295 3m0c_C LDL receptor, low-densi 97.9 0.019 6.4E-07 60.6 30.5 221 267-498 397-629 (791)
296 3tc9_A Hypothetical hydrolase; 97.8 0.00075 2.6E-08 66.2 17.2 152 338-500 138-300 (430)
297 3ei3_A DNA damage-binding prot 97.8 0.075 2.6E-06 58.6 37.4 321 153-500 553-954 (1158)
298 3a9g_A Putative uncharacterize 97.7 0.019 6.6E-07 54.5 25.7 60 430-489 259-330 (354)
299 2g8s_A Glucose/sorbosone dehyd 97.7 0.039 1.3E-06 52.3 27.8 66 430-495 271-348 (353)
300 4a0p_A LRP6, LRP-6, low-densit 97.7 0.073 2.5E-06 54.7 31.9 221 232-463 13-240 (628)
301 1n7d_A LDL receptor, low-densi 97.6 0.00047 1.6E-08 72.1 12.9 215 274-498 385-611 (699)
302 2ism_A Putative oxidoreductase 97.6 0.057 2E-06 51.1 29.1 102 153-271 30-152 (352)
303 2p9w_A MAL S 1 allergenic prot 97.4 0.021 7.2E-07 52.8 20.1 188 300-496 17-260 (334)
304 3sre_A PON1, serum paraoxonase 97.3 0.055 1.9E-06 51.0 22.3 108 338-457 166-295 (355)
305 3sre_A PON1, serum paraoxonase 97.2 0.046 1.6E-06 51.6 20.8 155 339-500 52-251 (355)
306 3s94_A LRP-6, low-density lipo 97.2 0.25 8.5E-06 50.6 40.5 306 154-486 84-450 (619)
307 4a0p_A LRP6, LRP-6, low-densit 97.2 0.26 8.9E-06 50.6 45.2 151 154-322 80-234 (628)
308 3a9g_A Putative uncharacterize 97.1 0.2 6.8E-06 47.4 28.0 102 153-271 28-152 (354)
309 2vpj_A Kelch-like protein 12; 96.8 0.067 2.3E-06 49.2 17.9 208 275-499 31-276 (301)
310 3pbp_A Nucleoporin NUP82; beta 96.8 0.14 4.8E-06 48.9 19.6 112 338-456 67-208 (452)
311 2g8s_A Glucose/sorbosone dehyd 96.7 0.41 1.4E-05 45.1 24.2 54 338-391 272-335 (353)
312 3ei3_A DNA damage-binding prot 96.6 1.2 4.1E-05 49.1 38.9 305 162-499 283-634 (1158)
313 2vpj_A Kelch-like protein 12; 96.6 0.17 5.9E-06 46.4 18.7 223 223-462 14-280 (301)
314 2xzh_A Clathrin heavy chain 1; 96.5 0.49 1.7E-05 43.5 31.4 224 261-494 74-325 (365)
315 3ii7_A Kelch-like protein 7; p 96.4 0.4 1.4E-05 43.9 20.1 221 225-462 13-274 (306)
316 1cru_A Protein (soluble quinop 96.4 0.43 1.5E-05 46.8 21.1 109 337-449 27-163 (454)
317 2xn4_A Kelch-like protein 2; s 96.4 0.18 6.3E-06 46.2 17.3 209 275-500 30-275 (302)
318 3ii7_A Kelch-like protein 7; p 96.3 0.29 9.9E-06 45.0 18.6 217 267-500 14-271 (306)
319 2xn4_A Kelch-like protein 2; s 96.3 0.27 9.4E-06 45.0 18.3 222 225-462 17-278 (302)
320 3das_A Putative oxidoreductase 96.3 0.35 1.2E-05 45.4 18.6 149 335-488 30-219 (347)
321 4asc_A Kelch repeat and BTB do 96.3 0.7 2.4E-05 42.6 20.9 219 226-462 7-279 (315)
322 2be1_A Serine/threonine-protei 96.2 0.08 2.7E-06 49.5 13.9 193 266-465 11-236 (339)
323 1tl2_A L10, protein (tachylect 96.2 0.25 8.6E-06 42.6 15.3 139 338-494 42-203 (236)
324 4asc_A Kelch repeat and BTB do 96.1 0.4 1.4E-05 44.2 18.1 204 268-491 8-253 (315)
325 1bpo_A Protein (clathrin); cla 96.0 1.2 4E-05 42.8 33.5 226 260-495 72-325 (494)
326 1zgk_A Kelch-like ECH-associat 95.9 0.57 2E-05 43.0 18.1 225 222-462 23-289 (308)
327 3qhy_B Beta-lactamase inhibito 95.8 0.81 2.8E-05 41.5 18.2 220 214-460 25-246 (282)
328 1zgk_A Kelch-like ECH-associat 95.6 0.48 1.6E-05 43.5 16.2 210 275-500 39-286 (308)
329 1xi4_A Clathrin heavy chain; a 95.5 2.5 8.5E-05 46.9 22.9 195 261-465 73-294 (1630)
330 2woz_A Kelch repeat and BTB do 95.3 1.2 4.1E-05 41.0 18.2 171 276-462 25-233 (318)
331 3pbp_A Nucleoporin NUP82; beta 95.2 1.9 6.5E-05 41.3 18.7 138 347-495 31-206 (452)
332 2woz_A Kelch repeat and BTB do 95.1 1.9 6.6E-05 39.6 19.0 140 226-370 18-187 (318)
333 2be1_A Serine/threonine-protei 94.8 0.98 3.4E-05 42.1 15.5 188 225-423 11-236 (339)
334 1tl2_A L10, protein (tachylect 94.7 1.7 5.9E-05 37.5 15.5 99 339-452 90-202 (236)
335 3ott_A Two-component system se 94.1 6.8 0.00023 41.0 43.4 266 212-498 145-445 (758)
336 1xi4_A Clathrin heavy chain; a 94.0 4.7 0.00016 44.8 20.4 203 160-384 72-306 (1630)
337 2uvk_A YJHT; unknown function, 93.9 1 3.4E-05 42.3 14.1 39 452-491 286-326 (357)
338 2zwa_A Leucine carboxyl methyl 93.5 3 0.0001 43.2 17.8 191 263-463 396-638 (695)
339 2xzh_A Clathrin heavy chain 1; 93.4 4.7 0.00016 37.1 27.6 235 219-461 73-333 (365)
340 3ott_A Two-component system se 93.2 9.5 0.00033 39.9 41.2 312 154-499 146-500 (758)
341 1cru_A Protein (soluble quinop 92.8 7.7 0.00026 37.8 28.8 102 255-356 28-163 (454)
342 3das_A Putative oxidoreductase 92.4 7.1 0.00024 36.4 29.4 113 147-272 25-158 (347)
343 2wg3_C Hedgehog-interacting pr 92.1 9.4 0.00032 37.2 25.0 103 256-358 16-160 (463)
344 3qhy_B Beta-lactamase inhibito 91.8 7.2 0.00024 35.2 21.8 181 214-418 64-246 (282)
345 1bpo_A Protein (clathrin); cla 91.5 10 0.00035 36.5 28.6 235 219-461 72-332 (494)
346 2uvk_A YJHT; unknown function, 91.4 2.9 0.0001 39.0 13.5 49 275-323 168-224 (357)
347 2zwa_A Leucine carboxyl methyl 90.6 9.9 0.00034 39.3 17.5 148 222-369 396-579 (695)
348 3sbq_A Nitrous-oxide reductase 90.2 0.76 2.6E-05 45.4 7.9 89 411-500 300-407 (638)
349 3s25_A Hypothetical 7-bladed b 89.2 13 0.00044 33.9 24.9 235 222-489 23-280 (302)
350 3s25_A Hypothetical 7-bladed b 89.1 13 0.00045 33.8 24.3 139 219-368 59-217 (302)
351 3sbq_A Nitrous-oxide reductase 88.3 1.5 5E-05 43.5 8.4 92 396-488 332-452 (638)
352 4gq2_M Nucleoporin NUP120; bet 83.9 26 0.0009 37.7 16.3 37 431-467 237-273 (950)
353 4hvt_A Ritya.17583.B, post-pro 68.8 1.1E+02 0.0038 31.5 21.9 225 261-498 137-427 (711)
354 3zwu_A Alkaline phosphatase PH 68.3 20 0.00069 36.0 9.3 57 432-488 478-548 (592)
355 4gq2_M Nucleoporin NUP120; bet 68.0 30 0.001 37.2 11.2 39 255-293 237-275 (950)
356 3b7f_A Glycosyl hydrolase, BNR 65.2 90 0.0031 29.1 26.5 50 225-275 23-77 (394)
357 4a9v_A PHOX; hydrolase, beta-p 64.5 29 0.00098 34.6 9.3 60 430-489 476-549 (592)
358 3f7f_A Nucleoporin NUP120; nuc 57.9 17 0.0006 37.2 6.6 38 430-469 222-259 (729)
359 4fhn_B Nucleoporin NUP120; pro 56.2 8.6 0.00029 42.4 4.5 38 431-468 239-276 (1139)
360 3b7f_A Glycosyl hydrolase, BNR 47.4 1.8E+02 0.0061 27.0 26.5 75 213-288 55-151 (394)
361 4fhn_B Nucleoporin NUP120; pro 46.5 15 0.0005 40.6 4.3 37 338-374 239-275 (1139)
362 3f7f_A Nucleoporin NUP120; nuc 42.1 33 0.0011 35.3 5.7 35 338-374 223-257 (729)
363 2wg3_C Hedgehog-interacting pr 39.6 2.7E+02 0.0091 26.8 26.7 51 214-264 15-79 (463)
364 3q6k_A 43.2 kDa salivary prote 34.7 2.9E+02 0.0099 25.8 22.8 162 276-448 124-342 (381)
365 3zwu_A Alkaline phosphatase PH 32.2 2E+02 0.0068 28.8 9.5 38 410-447 510-548 (592)
366 4a9v_A PHOX; hydrolase, beta-p 30.1 2E+02 0.0069 28.7 8.9 38 410-447 510-548 (592)
367 1wp5_A Topoisomerase IV; broke 27.2 3.5E+02 0.012 24.5 15.8 144 346-499 3-172 (323)
368 3uc1_A DNA gyrase subunit A; D 26.3 3.7E+02 0.013 24.4 24.1 141 347-498 108-276 (327)
369 3no0_A DNA gyrase subunit A; D 25.9 3.4E+02 0.012 23.8 18.8 139 347-496 79-239 (276)
370 3elq_A Arylsulfate sulfotransf 21.1 6.2E+02 0.021 25.1 15.7 37 432-470 357-394 (571)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-49 Score=394.60 Aligned_cols=297 Identities=29% Similarity=0.503 Sum_probs=261.2
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
...+.+|..+|++++|+|++.+|+||+.||+|+|||+.++... .. ..+|...|++++|+|+++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~-------------~~----l~~h~~~V~~v~~~~~~~ 163 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-------------RT----LKGHTDSVQDISFDHSGK 163 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------------EE----ECCCSSCEEEEEECTTSS
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-------------EE----EeccCCcEEEEEEcCCCC
Confidence 4568899999999999999999999999999999999876421 11 234577899999999999
Q ss_pred EEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 226 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
+|++|+.|++|+||+..+ .....+.+|...|++++|+|++++|++|+.|++|++||++++.+
T Consensus 164 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~----------------- 226 (410)
T 1vyh_C 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC----------------- 226 (410)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-----------------
T ss_pred EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-----------------
Confidence 999999999999999875 45667889999999999999999999999999999999987643
Q ss_pred CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEE
Q 010794 305 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 384 (501)
Q Consensus 305 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i 384 (501)
+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.+...+..|...|.++
T Consensus 227 ------------------------~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 227 ------------------------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp ------------------------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred ------------------------EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence 33456788899999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCC-----------CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010794 385 RWSPTGSGT-----------NNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSM 453 (501)
Q Consensus 385 ~~~p~g~~~-----------~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i 453 (501)
+|+|++... .......+|++|+.|+.|++||++++.++..+.+|...|++++|+|+|++|++|+.||+|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 999974210 000012378999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 454 HIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 454 ~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++||+.+++.+.++.++. .|++++|+|++.+||+|+.|++|+||++|
T Consensus 363 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999888887654 59999999999999999999999999986
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.6e-48 Score=404.51 Aligned_cols=332 Identities=23% Similarity=0.348 Sum_probs=280.3
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
....+|.+|...|++++|||+|++||||+.|++|+|||+.++... .... ...|...|.+++|+|+
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~-----------~~~~----~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-----------LKTT----IPVFSGPVKDISWDSE 114 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-----------EEEE----EECSSSCEEEEEECTT
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce-----------eeEe----ecccCCceEEEEECCC
Confidence 456788999999999999999999999999999999998654311 0111 1235678999999999
Q ss_pred CCEEEEEeCC----CeEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 224 GTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 224 ~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
|++|++++.+ +.|++|+.. .....+.+|...|++++|+|++. .|++|+.|++|++||..++++...+..|...+
T Consensus 115 g~~l~~~~~~~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V 193 (611)
T 1nr0_A 115 SKRIAAVGEGRERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 193 (611)
T ss_dssp SCEEEEEECCSSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE
T ss_pred CCEEEEEECCCCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce
Confidence 9999999875 479999853 44557889999999999999986 69999999999999999998889999999999
Q ss_pred EEEecCCC-ceEEEecCCCeEEEEEcCCCcceeeec-------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 010794 299 LDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 370 (501)
Q Consensus 299 ~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~ 370 (501)
.++.|.++ ..+++++.|++|++|++..+..+..+. +|.+.|.+++|+|++++|++|+.|++|++||+.+++.
T Consensus 194 ~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 99999754 578899999999999999888887774 7999999999999999999999999999999987655
Q ss_pred ee-------------------------------------------ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC
Q 010794 371 VH-------------------------------------------DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF 407 (501)
Q Consensus 371 ~~-------------------------------------------~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~ 407 (501)
+. .+.+|...|.+++|+|++. +|++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~---------~l~s~s~ 344 (611)
T 1nr0_A 274 EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK---------TLFSADA 344 (611)
T ss_dssp EEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS---------EEEEEET
T ss_pred eeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC---------EEEEEeC
Confidence 43 2346888999999999986 7899999
Q ss_pred CCeEEEEeCCCCeEEEEe-e------------------------------------------------------------
Q 010794 408 DSTVKLWDVELGKLLYSL-N------------------------------------------------------------ 426 (501)
Q Consensus 408 dg~i~iwd~~~~~~~~~~-~------------------------------------------------------------ 426 (501)
|++|++||+.++.....+ .
T Consensus 345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 424 (611)
T 1nr0_A 345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 424 (611)
T ss_dssp TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCc
Confidence 999999998766443221 0
Q ss_pred ---------------------CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEEecCCCEEEEEECCCCC
Q 010794 427 ---------------------GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTYTGNGGIFEVCWNKEGD 483 (501)
Q Consensus 427 ---------------------~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~~~~~~i~~~~ws~~g~ 483 (501)
.|...+++++|+|||++||+|+.|++|++|++.++.+ +....+...|.+++|+|+|+
T Consensus 425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~ 504 (611)
T 1nr0_A 425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA 504 (611)
T ss_dssp CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSS
T ss_pred EEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCC
Confidence 1234578899999999999999999999999988754 34434456799999999999
Q ss_pred EEEEEECCCeEEEEEee
Q 010794 484 KIAACFANHTVCVLDFR 500 (501)
Q Consensus 484 ~la~~~~d~~v~v~~~~ 500 (501)
+||+++.|++|.+|++.
T Consensus 505 ~las~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 505 FLVATDQSRKVIPYSVA 521 (611)
T ss_dssp EEEEEETTSCEEEEEGG
T ss_pred EEEEEcCCCCEEEEEcC
Confidence 99999999999999974
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-48 Score=370.97 Aligned_cols=289 Identities=22% Similarity=0.388 Sum_probs=255.5
Q ss_pred EEccCCccceeEEEECCC----CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC
Q 010794 147 TILEGHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 222 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~----~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~ 222 (501)
..+.+|.++|++++|+|+ +.+|+|||.|++|+||++..+.. .... ...+|...|.+++|++
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-----------~~~~----~l~gh~~~v~~~~~~~ 90 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-----------DLQW----SLEGHQLGVVSVDISH 90 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-----------EEEE----EECCCSSCEEEEEECS
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-----------eeee----eeccCCCCEEEEEECC
Confidence 457799999999999985 56999999999999999865321 1111 1235678899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEE
Q 010794 223 EGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 301 (501)
Q Consensus 223 ~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (501)
++.++++|+.|+.|++||+.. .....+..|...+++++|+|++++|++|+.|++|++||++++...
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~------------- 157 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE------------- 157 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE-------------
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee-------------
Confidence 999999999999999999864 455678889999999999999999999999999999998876432
Q ss_pred ecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCE
Q 010794 302 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 381 (501)
Q Consensus 302 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v 381 (501)
..+..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|
T Consensus 158 ----------------------------~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v 209 (321)
T 3ow8_A 158 ----------------------------YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 209 (321)
T ss_dssp ----------------------------EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC
T ss_pred ----------------------------EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce
Confidence 2334567789999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 382 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 382 ~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
.+++|+|++. +|++|+.|+.|++||+++++.+..+.+|...|++++|+|++++|++|+.|++|++||+.++
T Consensus 210 ~~l~~spd~~---------~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 210 RSLTFSPDSQ---------LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CEEEECTTSC---------EEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred eEEEEcCCCC---------EEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 9999999986 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 462 KIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 462 ~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+.+.++.++ ..|++++|+|+|++|++++.|++|+|||+-
T Consensus 281 ~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999988765 569999999999999999999999999973
No 4
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-47 Score=381.73 Aligned_cols=333 Identities=26% Similarity=0.535 Sum_probs=291.9
Q ss_pred CCccceeEEEECCCCC-EEEEEECCCcEEEEec----CCCCCCCCCCCCCceEEEEEeecccc------ccCCCCeEEEE
Q 010794 151 GHTSEVCACAWSPAGS-LLASGSGDSTARIWTI----ADGTSNGGAQNGPLNVLVLKHVKGRT------NEKSKDVTTLD 219 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~-~l~sgs~D~~i~iWd~----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~V~~~~ 219 (501)
.|.++|++++|+|+++ +||+|+.||.|++|++ .++.... .......+.... ..|...|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYW-------KLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CE-------EEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccc-------cccccccccccccccccccCCCCceEEEE
Confidence 4669999999999999 9999999999999999 6554110 000111111111 12466899999
Q ss_pred ECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCC--
Q 010794 220 WNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-- 297 (501)
Q Consensus 220 ~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~-- 297 (501)
|+|++++|++|+.||.|++|+..+.....+..|..+|++++|+|++++|++++.|+.|++||+.++.....+..+...
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 999999999999999999999888888889999999999999999999999999999999999999988888777665
Q ss_pred -------------eEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEe
Q 010794 298 -------------TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 364 (501)
Q Consensus 298 -------------~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd 364 (501)
+.++.|.++..+++++.++.|++|++....++..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 7778887788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEE
Q 010794 365 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYL 444 (501)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~l 444 (501)
+.+++.+..+..|...+.+++|+|++ +|++++.||.|++||+++++.+..+..|..+|++++|+|++++|
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~----------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD----------KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKY 345 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT----------EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEE
T ss_pred CCCCccceEecCCCccEEEEEECCCC----------EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEE
Confidence 99999988898999999999999976 58899999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCe--------------------eEEEEecC--C-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 445 ASGSLDKSMHIWSLKEGK--------------------IVKTYTGN--G-GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 445 asgs~Dg~i~iw~~~~~~--------------------~~~~~~~~--~-~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++|+.||.|++|++.+++ ++..+..+ + .|.+++|+|+|++||+++.||.|+||+++
T Consensus 346 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 346 AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 999999999999999888 78888765 4 89999999999999999999999999985
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-47 Score=369.82 Aligned_cols=287 Identities=23% Similarity=0.391 Sum_probs=253.5
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
....+|++|...|++++|+|++++|+||+.||+|+|||+.++.. ...+ ..+...|.+++|+|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~-------------~~~~----~~~~~~v~~~~~s~~ 108 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK-------------VHAI----PLRSSWVMTCAYAPS 108 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE-------------EEEE----ECSSSCEEEEEECTT
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc-------------ceEe----ecCCccEEEEEECCC
Confidence 44578999999999999999999999999999999999876531 1111 234677999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCc-----eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 224 GTLLATGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~-----~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
+++|++|+.|+.|++|+.... ....+.+|.+.|.++.|++++ .|++++.|++|++||+.++..
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~----------- 176 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQ----------- 176 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEE-----------
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcE-----------
Confidence 999999999999999997642 345678999999999999876 489999999999999987643
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCC
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 378 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 378 (501)
+..+.+|.+.|.+++|+|++++|++|+.|++|++||++++.++..+..|.
T Consensus 177 ------------------------------~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~ 226 (340)
T 1got_B 177 ------------------------------TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226 (340)
T ss_dssp ------------------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred ------------------------------EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc
Confidence 23456788999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSPTGEYLASGSLDKSMHIW 456 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spdg~~lasgs~Dg~i~iw 456 (501)
..|.+++|+|++. +|++|+.||+|++||+++++.+..+.. +...|++++|+|+|++|++|+.||.|++|
T Consensus 227 ~~v~~v~~~p~~~---------~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vw 297 (340)
T 1got_B 227 SDINAICFFPNGN---------AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297 (340)
T ss_dssp SCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCEEEEEEcCCCC---------EEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEE
Confidence 9999999999986 899999999999999999988877653 33579999999999999999999999999
Q ss_pred eCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 457 SLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 457 ~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
|+.+++.+..+.++ ..|.+++|+|+|.+||+|+.|++|+|||
T Consensus 298 d~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999988888765 4699999999999999999999999996
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.6e-47 Score=398.05 Aligned_cols=327 Identities=19% Similarity=0.322 Sum_probs=271.3
Q ss_pred eEEccCCccceeEEEECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
...+.+|...|++++|+|++. +|+||+.|++|++||..++. .... ..+|...|.+++|+|+|
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-------------~~~~----l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-------------FKST----FGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-------------EEEE----ECCCSSCEEEEEECTTS
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-------------Eeee----eccccCceEEEEECCCC
Confidence 456789999999999999987 69999999999999975432 1122 23467889999999999
Q ss_pred CEEEEEeCCCeEEEEECC-CceeEeec-------CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeec--
Q 010794 225 TLLATGSYDGQARIWSTN-GDLKCTLS-------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH-- 294 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~-~~~~~~~~-------~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-- 294 (501)
++|++|+.|++|+||+.. +.....+. +|.+.|++++|+|++.+|++|+.|++|++||+.++++...+..+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 999999999999999975 44444553 79999999999999999999999999999999999888777543
Q ss_pred -cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q 010794 295 -SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 373 (501)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 373 (501)
......+.| ....+++++.|+.+++|+...+.+...+.+|...|.+++|+|+|++|++++.|++|++||+.++.....
T Consensus 283 ~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 283 IEDQQLGIIW-TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGGCEEEEEE-CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred ccceeEEEEE-cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 223455556 456788999999999999998888888999999999999999999999999999999999987655433
Q ss_pred c-ccCCCC------------------------------------------------------------------------
Q 010794 374 L-REHSKE------------------------------------------------------------------------ 380 (501)
Q Consensus 374 ~-~~~~~~------------------------------------------------------------------------ 380 (501)
+ ..|...
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 2 223222
Q ss_pred ---------EEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCCCCCeEEEEECCCCCEEEEEeC
Q 010794 381 ---------IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 381 ---------v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~ 449 (501)
+.+++|+|+|. +|++|+.|++|++||+..+.. +.. .+|...|++|+|||+|++||+++.
T Consensus 442 ~~~~~~~~~v~~va~spdg~---------~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~ 511 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQ---------FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQ 511 (611)
T ss_dssp EEEEECSSCEEEEEECTTSC---------EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEET
T ss_pred eeeeecCCCceEEEEeCCCC---------EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcC
Confidence 34455555553 789999999999999987654 234 679999999999999999999999
Q ss_pred CCcEEEEeCCC-CeeEEE--Ee-cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 450 DKSMHIWSLKE-GKIVKT--YT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 450 Dg~i~iw~~~~-~~~~~~--~~-~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|++|++|++.+ ++++.. +. +...|++++|+|+|++||+|+.|++|+|||+.
T Consensus 512 d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 512 SRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp TSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 99999999987 666544 33 44569999999999999999999999999974
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.1e-47 Score=391.60 Aligned_cols=325 Identities=30% Similarity=0.547 Sum_probs=291.6
Q ss_pred CCCceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEEC
Q 010794 142 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 221 (501)
Q Consensus 142 ~~~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s 221 (501)
....+..+.+|...|++++|+|++++|++++.|+.|++|+.... ....+ .+|...|.+++|+
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~--------------~~~~~----~~h~~~v~~~~~~ 312 (577)
T 2ymu_A 251 NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ--------------LLQTL----TGHSSSVWGVAFS 312 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC--------------EEEEE----CCCSSCEEEEEEC
T ss_pred CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------------EEEEE----ecCCCCeEEEEEC
Confidence 34556788999999999999999999999999999999996421 11122 2456789999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEE
Q 010794 222 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 301 (501)
Q Consensus 222 ~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (501)
|++.+|++++.|+.|++|+..+.....+.+|..+|++++|+|++.+|++|+.|++|++||. +++....+..|...+.++
T Consensus 313 ~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~ 391 (577)
T 2ymu_A 313 PDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV 391 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEE
Confidence 9999999999999999999988888888999999999999999999999999999999995 567778888899999999
Q ss_pred ecCC-CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCC
Q 010794 302 DWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 380 (501)
Q Consensus 302 ~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~ 380 (501)
.|.+ ...+++++.|+.|++|+. ..+.+..+.+|...|.+++|+|++++|++++.|++|++||. +++.+..+..|...
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 469 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCC
Confidence 9865 456888999999999996 45677888999999999999999999999999999999996 56777888899999
Q ss_pred EEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010794 381 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 381 v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 460 (501)
|.+++|+|++. +|++++.|+.|++||. +++++..+.+|...|++|+|+|+|++||+|+.||.|++||. +
T Consensus 470 v~~~~~spd~~---------~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~ 538 (577)
T 2ymu_A 470 VRGVAFSPDGQ---------TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 538 (577)
T ss_dssp EEEEEECTTSC---------EEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred EEEEEEcCCCC---------EEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C
Confidence 99999999986 8999999999999995 68889999999999999999999999999999999999996 6
Q ss_pred CeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 461 GKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 461 ~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
++.+.++.++ ..|++++|+|||++|++++.|++|+|||
T Consensus 539 ~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 539 GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 7888888775 4699999999999999999999999997
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.1e-47 Score=359.31 Aligned_cols=290 Identities=23% Similarity=0.349 Sum_probs=248.7
Q ss_pred ceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 145 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
...+|.+|.+.|++++|+|++++|+||+.||+|++||+.++.. ++.+ ..+..+|.+++|+|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~-------------~~~~----~~~~~~v~~~~~~~~~ 67 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE-------------VRSI----QVTETPVRAGKFIARK 67 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------------EEEE----ECCSSCEEEEEEEGGG
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce-------------eEEe----eccCCcEEEEEEeCCC
Confidence 3467899999999999999999999999999999999876531 1122 2346789999999999
Q ss_pred CEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec
Q 010794 225 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (501)
++|++|+.|+.|++|+.. +.....+.+|.+.|++++|+|++.+|++|+.|++|++||++++..
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---------------- 131 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---------------- 131 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE----------------
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc----------------
Confidence 999999999999999986 456678899999999999999999999999999999999876421
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeecc-cCCCCE
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEI 381 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~v 381 (501)
....+.+|...|.+++|+| ++.+|++|+.|++|++||+.+......+. .+...+
T Consensus 132 ------------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v 187 (304)
T 2ynn_A 132 ------------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (304)
T ss_dssp ------------------------EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCE
T ss_pred ------------------------hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcE
Confidence 1235678999999999999 67899999999999999998877655554 455788
Q ss_pred EEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 382 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 382 ~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
..+.|+|.... .+|++|+.|++|++||+++++++..+.+|...|++++|+|++++|++|+.||+|++||+.++
T Consensus 188 ~~~~~~~~~~~-------~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 188 NYVDYYPLPDK-------PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEEECCSTTC-------CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEEEcCCC-------CEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999874321 27999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecC-CCEEEEEECCCCC--EEEEEECCCeEEEEEe
Q 010794 462 KIVKTYTGN-GGIFEVCWNKEGD--KIAACFANHTVCVLDF 499 (501)
Q Consensus 462 ~~~~~~~~~-~~i~~~~ws~~g~--~la~~~~d~~v~v~~~ 499 (501)
++++++..+ ..+++++|+|+|. ++|+|+.|| +.+|++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~ 300 (304)
T 2ynn_A 261 KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSL 300 (304)
T ss_dssp CEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred ceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence 999998764 5699999999985 577777665 666665
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-46 Score=365.57 Aligned_cols=288 Identities=24% Similarity=0.418 Sum_probs=256.9
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
....+|.+|...|++++|+|++++|||||.|++|+|||..++... ..+ ..+...|.+++|+|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~-------------~~~----~~~~~~v~~~~~sp~ 117 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE-------------HAV----TMPCTWVMACAYAPS 117 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-------------EEE----ECSSSCCCEEEECTT
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcc-------------eEE----ecCCCCEEEEEECCC
Confidence 445789999999999999999999999999999999998654311 111 123567999999999
Q ss_pred CCEEEEEeCCCeEEEEECCC-------ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccC
Q 010794 224 GTLLATGSYDGQARIWSTNG-------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 296 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~-------~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 296 (501)
|.+|++|+.|+.+++|+... .....+.+|.+.|.+++|+|++.+|++|+.|++|++||+.+++....+..|..
T Consensus 118 g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 99999999999999998742 23456778999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCC---CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q 010794 297 PTLDVDWRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 373 (501)
Q Consensus 297 ~~~~~~~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 373 (501)
.+.++.+.. ...+++++.|+.|++|++..++++..+.+|...|++++|+|++.+|++|+.|++|++||++..+.+..
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 998888753 36899999999999999999999999999999999999999999999999999999999998877665
Q ss_pred cccC--CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCC
Q 010794 374 LREH--SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 451 (501)
Q Consensus 374 ~~~~--~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 451 (501)
+..+ ...+.+++|+|++. +|++|+.|+.|++||+.+++.+..+.+|...|++++|+|+|++||+|+.||
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~---------~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGR---------LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EcCCCcccceeEEEEeCCCC---------EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 5433 34789999999986 899999999999999999999999999999999999999999999999999
Q ss_pred cEEEEe
Q 010794 452 SMHIWS 457 (501)
Q Consensus 452 ~i~iw~ 457 (501)
+|+||+
T Consensus 349 ~v~vW~ 354 (354)
T 2pbi_B 349 TLRVWA 354 (354)
T ss_dssp EEEEEC
T ss_pred CEEecC
Confidence 999995
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-45 Score=352.50 Aligned_cols=289 Identities=27% Similarity=0.459 Sum_probs=248.7
Q ss_pred EEccCCccceeEEEECCCC-CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 147 TILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~-~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
.+|.||.+.|++++|+|++ ++|+|||.|++|++|++...... ....+.. ..+|...|.+++|+|+++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--------~~~~~~~----~~~h~~~v~~~~~s~dg~ 78 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--------FGVPVRS----FKGHSHIVQDCTLTADGA 78 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--------EEEEEEE----EECCSSCEEEEEECTTSS
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--------ccccceE----EeCCcccEEEEEECCCCC
Confidence 5789999999999999975 89999999999999998642210 0111222 234678899999999999
Q ss_pred EEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 226 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
+|++|+.|++|+|||+.. .....+.+|..+|.+++|+|++.+|++|+.|++|++||++..
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~------------------- 139 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ------------------- 139 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-------------------
T ss_pred EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------------------
Confidence 999999999999999864 556678999999999999999999999999999999998532
Q ss_pred CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC------CCEEEEEeCCCeEEEEeCCCCceeeecccCC
Q 010794 305 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT------GSLLASCSDDVTAKIWNMKQDKYVHDLREHS 378 (501)
Q Consensus 305 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~------~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 378 (501)
.+..+.+|...|.+++|+|. +.+|++++.|++|++||+++.+....+.+|.
T Consensus 140 -----------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~ 196 (319)
T 3frx_A 140 -----------------------CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN 196 (319)
T ss_dssp -----------------------EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC
T ss_pred -----------------------eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC
Confidence 12345678888999999885 4589999999999999999999888899999
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 458 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 458 (501)
..|.+++|+|++. +|++|+.||.|++||+.+++.+..+..+ ..|.+++|+|++.+|++++.+ .|++|++
T Consensus 197 ~~v~~~~~sp~g~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~ 265 (319)
T 3frx_A 197 SNINTLTASPDGT---------LIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSL 265 (319)
T ss_dssp SCEEEEEECTTSS---------EEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEE
T ss_pred CcEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEe
Confidence 9999999999986 8999999999999999999999998865 689999999999999998865 5999999
Q ss_pred CCCeeEEEEec---------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 459 KEGKIVKTYTG---------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 459 ~~~~~~~~~~~---------~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
..+.++..+.. ...+.+++|+|+|++||+|+.|+.|+|||+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 266 DPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 98877766532 3458999999999999999999999999985
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-46 Score=359.47 Aligned_cols=295 Identities=28% Similarity=0.512 Sum_probs=245.4
Q ss_pred ceEEccCCcc-ceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 145 DVTILEGHTS-EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 145 ~~~~l~~H~~-~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
.+.++.+|.. .|.+++|+|+|++||||+.|++|+||++.++.. ..... ...+|...|.+++|+|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-----------~~~~~---~~~~h~~~v~~~~~sp~ 72 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-----------ICKSV---LSEGHQRTVRKVAWSPC 72 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-----------EEEEE---ECSSCSSCEEEEEECTT
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-----------eeeee---eccccCCcEEEEEECCC
Confidence 3567889988 999999999999999999999999999875421 00001 12346788999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEE
Q 010794 224 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 300 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (501)
+++|++|+.|+.|+||+.... ....+.+|..+|++++|+|++++|++|+.|++|++||+.++...
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~------------ 140 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY------------ 140 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE------------
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe------------
Confidence 999999999999999997643 35678899999999999999999999999999999998764311
Q ss_pred EecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeecccCC
Q 010794 301 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK--YVHDLREHS 378 (501)
Q Consensus 301 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~~ 378 (501)
..+..+.+|...|.+++|+|++++|++|+.|++|++||..++. +...+.+|.
T Consensus 141 --------------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~ 194 (345)
T 3fm0_A 141 --------------------------ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE 194 (345)
T ss_dssp --------------------------EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred --------------------------EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC
Confidence 1133566899999999999999999999999999999988765 446788999
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC---------------CeEEEEeeC-CCCCeEEEEECCCCC
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL---------------GKLLYSLNG-HREPVYSLAFSPTGE 442 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~---------------~~~~~~~~~-h~~~v~~l~~spdg~ 442 (501)
..|++++|+|++. +|++|+.|++|+||+... .+++..+.+ |...|++++|+|++.
T Consensus 195 ~~v~~l~~sp~g~---------~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~ 265 (345)
T 3fm0_A 195 STVWSLAFDPSGQ---------RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG 265 (345)
T ss_dssp SCEEEEEECTTSS---------EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC
T ss_pred CceEEEEECCCCC---------EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC
Confidence 9999999999986 899999999999998632 134555655 888999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCe--------eEE-EEec-CCCEEEEEECCCC-CEEEEEECCCeEEEEEee
Q 010794 443 YLASGSLDKSMHIWSLKEGK--------IVK-TYTG-NGGIFEVCWNKEG-DKIAACFANHTVCVLDFR 500 (501)
Q Consensus 443 ~lasgs~Dg~i~iw~~~~~~--------~~~-~~~~-~~~i~~~~ws~~g-~~la~~~~d~~v~v~~~~ 500 (501)
+|++++.|+.|++|+...+. +.. ...+ ...|++++|+|++ .+||+|+.||+|++|+++
T Consensus 266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 99999999999999987542 111 1122 3569999999998 599999999999999985
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-46 Score=362.06 Aligned_cols=293 Identities=20% Similarity=0.304 Sum_probs=234.9
Q ss_pred CCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEE
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 230 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg 230 (501)
.|...|.+++|+|||++|++++ |+++|+||........ ....+.. ........+...|.+++|+|++ .|++|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~v~~~~~s~d~-~l~~~ 99 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKD-PCAAPNE-----GFCSAGVQTEAGVADLTWVGER-GILVA 99 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESS-GGGTTCG-----GGCSEEEEESSCEEEEEEETTT-EEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeecc-ccccCCc-----ceeeeeeccCCCEEEEEEeCCC-eEEEE
Confidence 4677899999999999999888 7888999742110000 0000000 0000011234579999999985 68899
Q ss_pred eCCCeEEEEECCCc-e----eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC
Q 010794 231 SYDGQARIWSTNGD-L----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 305 (501)
Q Consensus 231 ~~dg~i~iw~~~~~-~----~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (501)
+.||.|+|||+... . ...+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~------------------ 161 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV------------------ 161 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------------
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE------------------
Confidence 99999999997643 2 223568999999999999999999999999999999987643
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeecc--cCCCCEE
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDLR--EHSKEIY 382 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~~v~ 382 (501)
+..+.+|.+.|.+++|+|++. +|++|+.|++|+|||+++++.+..+. .+...+.
T Consensus 162 -----------------------~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 218 (344)
T 4gqb_B 162 -----------------------LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPT 218 (344)
T ss_dssp -----------------------EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEE
T ss_pred -----------------------EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccce
Confidence 345678999999999999984 78999999999999999998887664 4556789
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCC
Q 010794 383 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~ 461 (501)
+++|+|++. .+|++|+.||.|+|||+++++++.++.+|...|++|+|+|++ ++||+||.|++|+|||+.++
T Consensus 219 ~~~~~p~~~--------~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 219 SLAWHPQQS--------EVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp EEEECSSCT--------TEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred eeeecCCCC--------cceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 999999754 278999999999999999999999999999999999999998 68999999999999999999
Q ss_pred eeEEEEecCCCEEEEEECCCCC-EEEEEECCCeEEEEEee
Q 010794 462 KIVKTYTGNGGIFEVCWNKEGD-KIAACFANHTVCVLDFR 500 (501)
Q Consensus 462 ~~~~~~~~~~~i~~~~ws~~g~-~la~~~~d~~v~v~~~~ 500 (501)
+++....+...|++++|+|+|. +||+|+.|++|.+|++.
T Consensus 291 ~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 291 ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 8876544456799999999986 67899999999999975
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-46 Score=364.20 Aligned_cols=288 Identities=19% Similarity=0.311 Sum_probs=239.7
Q ss_pred cCCccceeEEEECCCCCEEEEEEC------CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 150 EGHTSEVCACAWSPAGSLLASGSG------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 150 ~~H~~~V~~~~~sp~~~~l~sgs~------D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
.+|...|++++|||||++|||||. |+.|++|+..++...... ......+...|++++|+|+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-------------~~~~~~~~~~V~~~~~s~d 105 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-------------CTAGVQTEAGVTDVAWVSE 105 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG-------------CSEEEECSSCEEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE-------------ecccCCCCCCEEEEEEcCC
Confidence 469999999999999999999998 778999987665322111 1112235677999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCce-----eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 224 GTLLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~~-----~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
+. +++++.||.|+|||+.... .....+|.++|++++|+|++++|++|+.|++|++||+++++.
T Consensus 106 ~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~----------- 173 (357)
T 4g56_B 106 KG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV----------- 173 (357)
T ss_dssp TE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE-----------
T ss_pred CC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-----------
Confidence 86 5567889999999975421 224458999999999999999999999999999999887643
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeec--c
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDL--R 375 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~--~ 375 (501)
+..+.+|...|++++|+|++. ++++++.||+|++||+++++.+..+ .
T Consensus 174 ------------------------------~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 174 ------------------------------LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp ------------------------------EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred ------------------------------EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence 334567889999999999985 7899999999999999988876554 3
Q ss_pred cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCC-CEEEEEeCCCcEE
Q 010794 376 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMH 454 (501)
Q Consensus 376 ~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~ 454 (501)
.+...+.+++|+|++. .+|++|+.|+.|++||+++++++..+.+|...|++|+|+|++ ++||+|+.|++|+
T Consensus 224 ~~~~~v~~v~~sp~~~--------~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKD--------DTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp TCCSCEEEEEECTTST--------TEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred cccccccchhhhhccc--------ceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 5667899999999764 278999999999999999999999999999999999999997 6899999999999
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECC-CCCEEEEEECCCeEEEEEee
Q 010794 455 IWSLKEGKIVKTYTGNGGIFEVCWNK-EGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 455 iw~~~~~~~~~~~~~~~~i~~~~ws~-~g~~la~~~~d~~v~v~~~~ 500 (501)
|||+.+++++..+.+...|++++|+| ++++||+|+.|++|++|++.
T Consensus 296 iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 296 VLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 99999999988876677899999999 79999999999999999984
No 14
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.7e-45 Score=377.56 Aligned_cols=326 Identities=31% Similarity=0.556 Sum_probs=289.4
Q ss_pred CCCceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEEC
Q 010794 142 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 221 (501)
Q Consensus 142 ~~~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s 221 (501)
....+..+.+|...|.+++|+|++++|++|+.|+.|++|+.... .+..+ ..|...|.+++|+
T Consensus 210 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~--------------~~~~~----~~~~~~v~~v~~~ 271 (577)
T 2ymu_A 210 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--------------LLQTL----TGHSSSVNGVAFR 271 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC--------------EEEEE----CCCSSCEEEEEEC
T ss_pred CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCC--------------EEEEE----ecCCCCEEEEEEc
Confidence 34456778899999999999999999999999999999995421 11112 2356789999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEE
Q 010794 222 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 301 (501)
Q Consensus 222 ~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (501)
|++++|++++.|+.|++|+..+.....+.+|..+|++++|+|++.+|++++.|++|++||+... ....+..|...+.++
T Consensus 272 ~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~ 350 (577)
T 2ymu_A 272 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGV 350 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEE
Confidence 9999999999999999999998888889999999999999999999999999999999997654 455677788889999
Q ss_pred ecCC-CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCC
Q 010794 302 DWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 380 (501)
Q Consensus 302 ~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~ 380 (501)
.|.+ ...+++++.|+.+++|+. .++.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 428 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSC
T ss_pred EECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCC
Confidence 8865 457788899999999996 45677888999999999999999999999999999999995 56778888999999
Q ss_pred EEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010794 381 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 381 v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 460 (501)
|++++|+|++. +|++++.|+.|++||. +++.+..+.+|...|++++|+|++++||+++.|+.|++|+. +
T Consensus 429 v~~~~~s~d~~---------~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~ 497 (577)
T 2ymu_A 429 VWGVAFSPDDQ---------TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 497 (577)
T ss_dssp EEEEEECTTSS---------EEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-T
T ss_pred eEEEEECCCCC---------EEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-C
Confidence 99999999986 7999999999999996 57788899999999999999999999999999999999995 6
Q ss_pred CeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 461 GKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 461 ~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
++++..+.++ ..|++++|+|+|++||+++.|+.|+|||.
T Consensus 498 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 7888888775 46999999999999999999999999984
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.1e-47 Score=371.68 Aligned_cols=292 Identities=25% Similarity=0.471 Sum_probs=254.5
Q ss_pred ceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 145 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
...+|.||.+.|++++|+|++++|+|||.|++|+|||+.++.. ...+ ..|...|.+++|+|+|
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~-------------~~~~----~~h~~~v~~~~~s~~g 120 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK-------------THAI----KLHCPWVMECAFAPNG 120 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-------------EEEE----ECCCTTCCCCEECTTS
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-------------ceEE----ecCCCCEEEEEECCCC
Confidence 4578999999999999999999999999999999999876531 1112 2356779999999999
Q ss_pred CEEEEEeCCCeEEEEECCCc--------eeEeecCCCCCEEEEEecCCC-CEEEEEecCCeEEEEeCCCcceeEee----
Q 010794 225 TLLATGSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF---- 291 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~--------~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~---- 291 (501)
++|++|+.|+.+++|++... ....+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.++.....+
T Consensus 121 ~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~ 200 (380)
T 3iz6_a 121 QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEF 200 (380)
T ss_dssp SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCS
T ss_pred CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeeccc
Confidence 99999999999999997531 234678999999999999974 57999999999999999999887776
Q ss_pred -eeccCCeEEEecC--CCceEEEecCCCeEEEEEcC-CCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 010794 292 -EFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 292 -~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~ 367 (501)
..|...+.++.|. +...|++++.|+.|++|+++ ...++..+.+|.+.|++++|+|++++|++|+.||+|++||+++
T Consensus 201 ~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 201 PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 4577788888874 45788999999999999997 4577889999999999999999999999999999999999999
Q ss_pred CceeeecccCC-------CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe----eCCCCCeEEEE
Q 010794 368 DKYVHDLREHS-------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL----NGHREPVYSLA 436 (501)
Q Consensus 368 ~~~~~~~~~~~-------~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~----~~h~~~v~~l~ 436 (501)
+..+..+..+. ..+.+++|+|+|. +|++|+.||.|++||+..++.+..+ .+|...|++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---------~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGR---------LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSS---------EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEE
T ss_pred CcEEEEecccccccccccCceEEEEECCCCC---------EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEE
Confidence 98877665432 2488999999987 8999999999999999999988877 68999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010794 437 FSPTGEYLASGSLDKSMHIWSLKEGK 462 (501)
Q Consensus 437 ~spdg~~lasgs~Dg~i~iw~~~~~~ 462 (501)
|+|+|++|++||.||+|+||++..++
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999999997653
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-45 Score=354.27 Aligned_cols=296 Identities=25% Similarity=0.415 Sum_probs=236.0
Q ss_pred ceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 145 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
.+.+|.+|..+|.+++|+|+ +||||+.|++|++|++..+.. . ....+ ....|...|.+++|+|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~---------~--~~~~~--~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF---------T--LIDVL--DETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC---------E--EEEEE--CTTCCCSCEEEEEECTTS
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe---------E--EEEEE--ecCCccCCEEEEEECCCC
Confidence 35678999999999999998 999999999999999875321 0 11111 012367889999999999
Q ss_pred CEEEEEeCCCeEEEEECCC--------ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccC
Q 010794 225 TLLATGSYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 296 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~--------~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 296 (501)
++|++|+.|+.|+||+... .....+.+|..+|++++|+|++++|++|+.|++|++||++....
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~--------- 141 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE--------- 141 (330)
T ss_dssp SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---------
T ss_pred CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---------
Confidence 9999999999999999742 34456889999999999999999999999999999999853210
Q ss_pred CeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeeec
Q 010794 297 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDL 374 (501)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~--~~~~~~ 374 (501)
...++..+.+|...|.+++|+|++.+|++|+.|++|++||..++ .++..+
T Consensus 142 ----------------------------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 142 ----------------------------EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp ----------------------------CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred ----------------------------CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 01224456789999999999999999999999999999998766 577888
Q ss_pred ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--------eEEEEeeC-CCCCeEEEEECCCCCEEE
Q 010794 375 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--------KLLYSLNG-HREPVYSLAFSPTGEYLA 445 (501)
Q Consensus 375 ~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--------~~~~~~~~-h~~~v~~l~~spdg~~la 445 (501)
.+|...|.+++|+|++.. .+|++|+.|++|++||+..+ .+...+.+ |...|++++|++++ +|+
T Consensus 194 ~~h~~~v~~~~~~~~~~~-------~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~ 265 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGV-------FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIA 265 (330)
T ss_dssp CCCSSCEEEEEECCSSSS-------CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEE
T ss_pred cCCCCcEEEEEecCCCCe-------eEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEE
Confidence 999999999999998421 27899999999999998754 44555655 89999999999765 899
Q ss_pred EEeCCCcEEEEeCCCCe--eEEEE-ecCC--CEEEEEECC--CCCEEEEEECCCeEEEEEee
Q 010794 446 SGSLDKSMHIWSLKEGK--IVKTY-TGNG--GIFEVCWNK--EGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 446 sgs~Dg~i~iw~~~~~~--~~~~~-~~~~--~i~~~~ws~--~g~~la~~~~d~~v~v~~~~ 500 (501)
+|+.||+|++|+..++. .+... ..+. .|.+++|+| ++++||+|+.||+|+||++.
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 99999999999998874 33332 3333 699999999 78999999999999999975
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.1e-44 Score=345.82 Aligned_cols=295 Identities=22% Similarity=0.385 Sum_probs=239.2
Q ss_pred ceEEccCCccceeEEEE-----CC-CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEE
Q 010794 145 DVTILEGHTSEVCACAW-----SP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 218 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~-----sp-~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 218 (501)
...+|.||.+.|++++| +| ++++|+||+.|++|++|++........ ....... ..+|...|.++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~------~~~~~~~----l~~h~~~V~~~ 82 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY------FGIPHKA----LTGHNHFVSDL 82 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB------SEEEEEE----ECCCSSCEEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc------cccccch----hccCCCceEEE
Confidence 45689999999999999 77 899999999999999999875432110 0111122 23467889999
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCC
Q 010794 219 DWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 297 (501)
Q Consensus 219 ~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 297 (501)
+|+|++.++++|+.|++|++||+.. .....+.+|..+|++++|+|++++|++|+.|++|++||+...... .
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~-~------- 154 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF-S------- 154 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE-E-------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee-e-------
Confidence 9999999999999999999999864 566688899999999999999999999999999999998632110 0
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCC----------CEEEEEeCCCeEEEEeCCC
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG----------SLLASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~----------~~l~s~s~Dg~i~iwd~~~ 367 (501)
.....+|...|.+++|+|++ .+|++++.||+|++||. .
T Consensus 155 -------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~ 202 (343)
T 2xzm_R 155 -------------------------------SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-N 202 (343)
T ss_dssp -------------------------------CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-T
T ss_pred -------------------------------eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-C
Confidence 01123577889999999887 78999999999999994 4
Q ss_pred CceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCeEEEEECCCCCEEEE
Q 010794 368 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 368 ~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~~las 446 (501)
......+..|...|.+++|+|++. +|++|+.||.|++||+.. ......+. +...|++++|+|++++|++
T Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~g~---------~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 203 FQIRYTFKAHESNVNHLSISPNGK---------YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV 272 (343)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSS---------EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE
T ss_pred CceeEEEcCccccceEEEECCCCC---------EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE
Confidence 566777889999999999999986 899999999999999953 33444443 4567999999999998875
Q ss_pred EeCCCcEEEEeCCCCeeEE--EEe-----------c-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 447 GSLDKSMHIWSLKEGKIVK--TYT-----------G-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 447 gs~Dg~i~iw~~~~~~~~~--~~~-----------~-~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
| .|+.|++|++.+++... .+. + ...+.+++|+|+|++||+|+.||+|++|++.
T Consensus 273 ~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 273 G-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp E-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred E-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 5 57889999998876543 332 2 2458999999999999999999999999975
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-43 Score=349.66 Aligned_cols=298 Identities=25% Similarity=0.473 Sum_probs=242.1
Q ss_pred CCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEee-ccccccCCCCeEEEEECCCCCEEEE
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-KGRTNEKSKDVTTLDWNGEGTLLAT 229 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~~~~s~~~~~l~s 229 (501)
+|...|++++|||+|++||+|+ |+.+++|++.++................... ......+...|.+++|+|+|++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999976 7899999998765321111000000000000 0000112335999999999999999
Q ss_pred EeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCce
Q 010794 230 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 308 (501)
Q Consensus 230 g~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (501)
|+.|+.|+|||... .....+.+|...|++++|+|++.+|++|+.|++|++||+++++....+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----------------- 203 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----------------- 203 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-----------------
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE-----------------
Confidence 99999999999875 455678899999999999999999999999999999999887543221
Q ss_pred EEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeec-------ccCCCC
Q 010794 309 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDL-------REHSKE 380 (501)
Q Consensus 309 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-------~~~~~~ 380 (501)
.+...+.+++|+| ++++|++|+.|+.|++||+.++..+..+ .+|...
T Consensus 204 -------------------------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 204 -------------------------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp -------------------------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC
T ss_pred -------------------------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC
Confidence 1344688999999 8999999999999999999998877665 568899
Q ss_pred EEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC------------eEEEEeeCCCCCeEEEEECCCCCEEEEEe
Q 010794 381 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------------KLLYSLNGHREPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 381 v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------------~~~~~~~~h~~~v~~l~~spdg~~lasgs 448 (501)
|++++|+|++. +|++|+.|+.|++||+++. .+...+.+|...|.+++|+|++.+|++|+
T Consensus 259 v~~v~~~~~g~---------~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 259 VYSVVFTRDGQ---------SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp EEEEEECTTSS---------EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred EEEEEECCCCC---------EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 99999999986 7899999999999998753 45667889999999999999999999999
Q ss_pred CCCcEEEEeCCCCeeEEEEecC-CCEEEEEECC------CCCEEEEEECCCeEEEEEee
Q 010794 449 LDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNK------EGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 449 ~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~------~g~~la~~~~d~~v~v~~~~ 500 (501)
.|+.|++||+.+++.+..+.++ ..|.+++|++ ++++||+|+.|++|+||+++
T Consensus 330 ~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 330 KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 9999999999999998888765 4599999886 68899999999999999986
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.9e-43 Score=336.34 Aligned_cols=289 Identities=28% Similarity=0.522 Sum_probs=250.1
Q ss_pred ceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 145 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
...++.+|...|++++|+|++++|++|+.||.|++|++.++.. ... ...|...|.+++|+|++
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~-------------~~~----~~~h~~~v~~~~~~~~~ 77 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-------------EKT----ISGHKLGISDVAWSSDS 77 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------------EEE----ECCCSSCEEEEEECTTS
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc-------------chh----hccCCCceEEEEEcCCC
Confidence 3567899999999999999999999999999999999876531 111 23456789999999999
Q ss_pred CEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec
Q 010794 225 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (501)
++|++|+.|+.|++|+... .....+.+|...|.+++|+|++++|++|+.|++|++||++++..
T Consensus 78 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------------- 141 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC---------------- 141 (312)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE----------------
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE----------------
Confidence 9999999999999999864 55667889999999999999999999999999999999987543
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecc-cCCCCEE
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIY 382 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~v~ 382 (501)
+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+. .+...+.
T Consensus 142 -------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 196 (312)
T 4ery_A 142 -------------------------LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 196 (312)
T ss_dssp -------------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEE
T ss_pred -------------------------EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceE
Confidence 23455688889999999999999999999999999999988776654 4566899
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEE---EEECCCCCEEEEEeCCCcEEEEeCC
Q 010794 383 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS---LAFSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~---l~~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
.++|+|++. +|++++.||.|++||+++++.+..+.+|...+.+ ....+++.+|++|+.||.|++||+.
T Consensus 197 ~~~~~~~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 197 FVKFSPNGK---------YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp EEEECTTSS---------EEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred EEEECCCCC---------EEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 999999986 7899999999999999999999999988765332 3344678999999999999999999
Q ss_pred CCeeEEEEecC-CCEEEEEECCCCCEEEEEE--CCCeEEEEEee
Q 010794 460 EGKIVKTYTGN-GGIFEVCWNKEGDKIAACF--ANHTVCVLDFR 500 (501)
Q Consensus 460 ~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~--~d~~v~v~~~~ 500 (501)
+++++..+.++ ..|.+++|+|+++.||+++ .|++|+||+..
T Consensus 268 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 268 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999988765 4599999999999999987 59999999864
No 20
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-43 Score=341.62 Aligned_cols=321 Identities=17% Similarity=0.260 Sum_probs=277.6
Q ss_pred CccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe
Q 010794 152 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 152 H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
|..+|.+++|+|+|++++++..++.+.+|..... ..... ...|...|++++|+|++++|++++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~------------~~~~~-----~~~h~~~v~~~~~~~~~~~l~~~~ 70 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH------------ARQIN-----TLNHGEVVCAVTISNPTRHVYTGG 70 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE------------EEEEE-----EECCSSCCCEEEECSSSSEEEEEC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc------------cccce-----eccCCCceEEEEEecCCcEEEEcC
Confidence 5678999999999999998887777666643211 11111 124577899999999999999999
Q ss_pred CCCeEEEEECCCc----eeEeec--CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcc--eeEeeeeccCCeEEEec
Q 010794 232 YDGQARIWSTNGD----LKCTLS--KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 232 ~dg~i~iw~~~~~----~~~~~~--~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~ 303 (501)
||.|++|+.... ....+. .|..+|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...+.++.|
T Consensus 71 -dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 71 -KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp -BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred -CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 999999998642 222232 799999999999999999999999999999999877 55667778888999998
Q ss_pred CC-CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEE
Q 010794 304 RN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 382 (501)
Q Consensus 304 ~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~ 382 (501)
.+ ...+++++.++.|++|++...+++..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+ .+...+.
T Consensus 150 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~ 228 (337)
T 1gxr_A 150 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIF 228 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-cCCCceE
Confidence 75 457888999999999999999999999999999999999999999999999999999999998887765 4677899
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010794 383 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 462 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 462 (501)
+++|+|++. +|++++.++.|++||+.+++. ..+..|..+|++++|+|++++|++++.||.|++|++.+++
T Consensus 229 ~~~~s~~~~---------~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 229 SLGYCPTGE---------WLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEEECTTSS---------EEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEECCCCC---------EEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 999999986 789999999999999998775 4677899999999999999999999999999999999999
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEeeC
Q 010794 463 IVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFRM 501 (501)
Q Consensus 463 ~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~~ 501 (501)
.+........+.+++|+|+|++|++++.||.|++|++.+
T Consensus 299 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 337 (337)
T 1gxr_A 299 SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 337 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEEC
T ss_pred EEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEeC
Confidence 887777777899999999999999999999999999864
No 21
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-46 Score=369.59 Aligned_cols=325 Identities=20% Similarity=0.379 Sum_probs=277.6
Q ss_pred CccceeEEEECCCCC-EEEEE----------ECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE
Q 010794 152 HTSEVCACAWSPAGS-LLASG----------SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 220 (501)
Q Consensus 152 H~~~V~~~~~sp~~~-~l~sg----------s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 220 (501)
+...|.+++|+|+++ +|++| +.|+.|+||++.++..... .....+...|++++|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~---------------~~~~~~~~~v~~~~~ 75 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP---------------IASLQVDSKFNDLDW 75 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC---------------SCCCCCSSCEEEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE---------------EEEEecCCceEEEEE
Confidence 445789999999987 99999 8999999999976532100 011124678999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCC-----ceeEeecCCCCCEEEEEecCC-CCEEEEEecCCeEEEEeCCCcc------ee
Q 010794 221 NGEGTLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEE------WK 288 (501)
Q Consensus 221 s~~~~~l~sg~~dg~i~iw~~~~-----~~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~D~~i~iwd~~~~~------~~ 288 (501)
+|++.+|++|+.||.|++|+... .....+.+|..+|++++|+|+ +++|++|+.|++|++||+.++. ..
T Consensus 76 s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 155 (416)
T 2pm9_A 76 SHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP 155 (416)
T ss_dssp CSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC
T ss_pred CCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccc
Confidence 99999999999999999999875 366778899999999999998 8999999999999999998876 22
Q ss_pred E---eeeeccCCeEEEecCCC--ceEEEecCCCeEEEEEcCCCcceeeecCC------CCceeEEEEcCCC-CEEEEEeC
Q 010794 289 Q---QFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGH------QGEVNCVKWDPTG-SLLASCSD 356 (501)
Q Consensus 289 ~---~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~s~ 356 (501)
. .+..|...+.++.|.++ ..+++++.|+.|++|++...+++..+..| ...|.+++|+|++ .+|++++.
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 2 23567788899998754 67899999999999999999888888776 7889999999997 68999999
Q ss_pred CC---eEEEEeCCCC-ceeeecc-cCCCCEEEEEEcC-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010794 357 DV---TAKIWNMKQD-KYVHDLR-EHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 430 (501)
Q Consensus 357 Dg---~i~iwd~~~~-~~~~~~~-~~~~~v~~i~~~p-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 430 (501)
|+ .|++||++++ ..+..+. .|...|.+++|+| ++. +|++++.||.|++||+++++.+..+.+|..
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---------~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 306 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH---------LLLSSGRDNTVLLWNPESAEQLSQFPARGN 306 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS---------CEEEEESSSEEEEECSSSCCEEEEEECSSS
T ss_pred CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC---------eEEEEeCCCCEEEeeCCCCccceeecCCCC
Confidence 99 9999999986 6677777 8999999999999 664 789999999999999999999999999999
Q ss_pred CeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEEe------------------------------------cCCCE
Q 010794 431 PVYSLAFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTYT------------------------------------GNGGI 473 (501)
Q Consensus 431 ~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~~------------------------------------~~~~i 473 (501)
.|++++|+|++ .+|++++.|+.|++|++.++....... ....+
T Consensus 307 ~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPS 386 (416)
T ss_dssp CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCS
T ss_pred ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCc
Confidence 99999999999 899999999999999998765322110 12345
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 474 FEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 474 ~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
..++|+|+|++||+++.|+.|.||++.
T Consensus 387 ~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 387 PAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp CCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 689999999999999999999999874
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.7e-43 Score=342.62 Aligned_cols=280 Identities=20% Similarity=0.385 Sum_probs=252.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc---
Q 010794 210 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--- 285 (501)
Q Consensus 210 ~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~--- 285 (501)
+|...|++++|+|++++|+||+.||+|+||+.. +.....+..|...|.+++|+|++.+|++|+.|+++++|++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 467889999999999999999999999999975 4555677889999999999999999999999999999998643
Q ss_pred ---ceeEeeeeccCCeEEEecCCC-ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC--CCCEEEEEeCCCe
Q 010794 286 ---EWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP--TGSLLASCSDDVT 359 (501)
Q Consensus 286 ---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~Dg~ 359 (501)
.....+..|...+..+.|.++ ..+++++.|++|++|++..++++..+.+|...|.+++|+| ++++|++|+.||+
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 344567788999999998754 5789999999999999999999999999999999999987 5789999999999
Q ss_pred EEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--CCCeEEEEE
Q 010794 360 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--REPVYSLAF 437 (501)
Q Consensus 360 i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~ 437 (501)
|++||+++++++..+..|...|.+++|+|++. +|++|+.|++|++||++.++.+..+..+ ...+++++|
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~---------~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGD---------AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCC---------EEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 99999999999999999999999999999886 7999999999999999998887766543 357899999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
+|+|++|++|+.|++|++||+.+++.+..+.++ ..|.+++|+|+|++||+|+.|++|+||+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999988888765 4699999999999999999999999996
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.7e-43 Score=337.34 Aligned_cols=294 Identities=24% Similarity=0.379 Sum_probs=248.3
Q ss_pred eEEccCCccceeEEEECCC-CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 146 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~-~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
..+|+||++.|++|+|+|+ +++|||||.|++|+|||+.+..... ......+ .+|...|.+++|+|++
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~--------~~~~~~l----~~h~~~V~~~~~s~dg 98 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY--------GIPQRAL----RGHSHFVSDVVISSDG 98 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS--------EEEEEEE----CCCSSCEEEEEECTTS
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc--------ceeeEEE----eCCCCCEEEEEECCCC
Confidence 3579999999999999998 6899999999999999997653211 1112222 3457889999999999
Q ss_pred CEEEEEeCCCeEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCccee-EeeeeccCCeEEEe
Q 010794 225 TLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-QQFEFHSGPTLDVD 302 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~~~~~~~~~~~~ 302 (501)
++|++|+.|+.|++|+.... .......+...+..+.+++.+.+|++|+.|+.+++||+...... .....|...+..+.
T Consensus 99 ~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 99 QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR 178 (340)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE
T ss_pred CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceE
Confidence 99999999999999998754 34456678888999999999999999999999999998765433 33456677777777
Q ss_pred cCC---CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCC
Q 010794 303 WRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 379 (501)
Q Consensus 303 ~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 379 (501)
|.. ...+++++.|+.|++|++...+.+..+.+|.+.|++++|+|++++|++|+.||.|++||+++.+.+..+..+ .
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~ 257 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-D 257 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-S
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-c
Confidence 643 346788999999999999999999999999999999999999999999999999999999999888877654 5
Q ss_pred CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee---------CCCCCeEEEEECCCCCEEEEEeCC
Q 010794 380 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN---------GHREPVYSLAFSPTGEYLASGSLD 450 (501)
Q Consensus 380 ~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~---------~h~~~v~~l~~spdg~~lasgs~D 450 (501)
.+.++.|+|++. +++++.|+.|++||++.+..+..+. +|...|++++|+|+|++||+|+.|
T Consensus 258 ~v~~~~~~~~~~----------~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 258 IINALCFSPNRY----------WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp CEEEEEECSSSS----------EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred eEEeeecCCCCc----------eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 799999999873 5667789999999999888776653 688899999999999999999999
Q ss_pred CcEEEEeCCCCe
Q 010794 451 KSMHIWSLKEGK 462 (501)
Q Consensus 451 g~i~iw~~~~~~ 462 (501)
|.|+||++.+|+
T Consensus 328 g~v~iW~~~tGt 339 (340)
T 4aow_A 328 NLVRVWQVTIGT 339 (340)
T ss_dssp SCEEEEEEEC--
T ss_pred CEEEEEeCCCcC
Confidence 999999999875
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.6e-44 Score=351.04 Aligned_cols=282 Identities=20% Similarity=0.368 Sum_probs=249.7
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcc--
Q 010794 210 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-- 286 (501)
Q Consensus 210 ~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~-- 286 (501)
+|...|++++|+|++++|+||+.||+|+||+... .....+..|...|.+++|+|++++|++|+.|+++++||+.+..
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR 143 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc
Confidence 4578899999999999999999999999999754 5566788999999999999999999999999999999986532
Q ss_pred -----eeEeeeeccCCeEEEecCC--CceEEEecCCCeEEEEEcCCCcceeee-----cCCCCceeEEEEcC-CCCEEEE
Q 010794 287 -----WKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTF-----AGHQGEVNCVKWDP-TGSLLAS 353 (501)
Q Consensus 287 -----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~-----~~h~~~v~~v~~~~-~~~~l~s 353 (501)
....+..|.+.+..+.|.+ ...+++++.|++|++|++.++..+..+ .+|...|.+++|+| ++.+|++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 3345677888888888764 457999999999999999999888777 68999999999987 7899999
Q ss_pred EeCCCeEEEEeCC-CCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC---
Q 010794 354 CSDDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR--- 429 (501)
Q Consensus 354 ~s~Dg~i~iwd~~-~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~--- 429 (501)
|+.|++|++||++ ....+..+.+|...|.+++|+|++. +|++|+.||+|++||++++..+..+..+.
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~---------~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ---------RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS---------EEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC---------eEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 9999999999998 4577788899999999999999986 79999999999999999999988876543
Q ss_pred ----CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE----ec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 430 ----EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY----TG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 430 ----~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~----~~-~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
..|++++|+|+|++|++|+.||.|++||+.+++.+..+ .+ .+.|.+++|+|+|++||+|+.|++|+||++.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 24899999999999999999999999999999887766 22 4569999999999999999999999999975
No 25
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.3e-42 Score=345.05 Aligned_cols=317 Identities=25% Similarity=0.443 Sum_probs=280.3
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
...+.+|.+.|.. +++++|++|++|+.||+|++||+.++.. ... ..+|...|.+++|+ +.
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~-------------~~~----~~~h~~~v~~~~~~--~~ 170 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKC-------------LRT----LVGHTGGVWSSQMR--DN 170 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCE-------------EEE----CCCCSSCEEEEEEE--TT
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcE-------------EEE----EcCCCCCEEEEEec--CC
Confidence 4678999987643 2555799999999999999999876542 112 23467889999997 56
Q ss_pred EEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 226 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
+|++|+.||.|++|+... .....+.+|...|.++.|+ +++|++|+.|++|++||+.+++....+..|..++.++.+
T Consensus 171 ~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY- 247 (445)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-
Confidence 999999999999999864 5567788999999999996 568999999999999999999999999999999999999
Q ss_pred CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEE
Q 010794 305 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 384 (501)
Q Consensus 305 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i 384 (501)
+...+++++.|+.|++|++....++..+.+|...|.+++| ++.++++|+.||.|++||+.+++.+..+..|...+.++
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 325 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE
Confidence 5677899999999999999999999999999999999999 78999999999999999999999999999999999998
Q ss_pred EEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC---CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 385 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG---HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
.+++. +|++|+.||.|++||+++++.+..+.+ |..+|++++|+ +++|++|+.||.|++|++.++
T Consensus 326 ~~~~~-----------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 326 ELKDN-----------ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEETT-----------EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEeCC-----------EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 87542 789999999999999999999999886 88899999996 579999999999999999999
Q ss_pred eeEEEE------ecCCCEEEEEECCCCCEEEEEECCCe----EEEEEee
Q 010794 462 KIVKTY------TGNGGIFEVCWNKEGDKIAACFANHT----VCVLDFR 500 (501)
Q Consensus 462 ~~~~~~------~~~~~i~~~~ws~~g~~la~~~~d~~----v~v~~~~ 500 (501)
+.+..+ ...+.|++++|+|+|.+||+|+.||+ |.|||++
T Consensus 393 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 393 EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 988877 23456999999999999999999998 9999986
No 26
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.4e-42 Score=358.06 Aligned_cols=328 Identities=17% Similarity=0.292 Sum_probs=272.5
Q ss_pred CceEEccCCccceeEEEECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCC---CeEEEE
Q 010794 144 SDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSK---DVTTLD 219 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~V~~~~ 219 (501)
..+..+.+|...|++++|+|+++ +|++|+.|+.|++||+.++.. ...+. .|.. .|++++
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~-------------~~~~~----~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-------------SASDR----THHKQGSFVRDVE 213 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE-------------EEEEC----SSSCTTCCEEEEE
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce-------------eeeec----ccCCCCceEEEEE
Confidence 34677889999999999999998 899999999999999865421 12222 2455 899999
Q ss_pred ECCC-CCEEEEEeCCCeEEEEECCC-ceeEee-c---CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 220 WNGE-GTLLATGSYDGQARIWSTNG-DLKCTL-S---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 220 ~s~~-~~~l~sg~~dg~i~iw~~~~-~~~~~~-~---~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
|+|+ +++|++|+.||.|++|+... .....+ . .|..+|++++|+ ++.+|++++.|++|++||+++++....+..
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 9999 99999999999999999764 455566 5 899999999999 999999999999999999999998888877
Q ss_pred c----cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC----------------------
Q 010794 294 H----SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT---------------------- 347 (501)
Q Consensus 294 ~----~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---------------------- 347 (501)
+ ...+..+.|.+...+++++.++.|++|++....++..+.+|...|.+++| |+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~ 371 (615)
T 1pgu_A 293 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDH 371 (615)
T ss_dssp CTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCC
T ss_pred CCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcc
Confidence 6 35566777777778899999999999998877777777666655555544 32
Q ss_pred -----------C--------------------------------------------------------------------
Q 010794 348 -----------G-------------------------------------------------------------------- 348 (501)
Q Consensus 348 -----------~-------------------------------------------------------------------- 348 (501)
+
T Consensus 372 ~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (615)
T 1pgu_A 372 SNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSA 451 (615)
T ss_dssp CSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEE
T ss_pred cCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceE
Confidence 3
Q ss_pred -----CEEEEEeC-CCeEEEEeCCCCcee-eecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010794 349 -----SLLASCSD-DVTAKIWNMKQDKYV-HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 421 (501)
Q Consensus 349 -----~~l~s~s~-Dg~i~iwd~~~~~~~-~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 421 (501)
++|++++. |+.|++||+.++... ..+..|...|.+++|+|++. +|++|+.||.|++||+.+++.
T Consensus 452 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---------~l~~~~~dg~i~iw~~~~~~~ 522 (615)
T 1pgu_A 452 VSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET---------YIAAGDVMGKILLYDLQSREV 522 (615)
T ss_dssp EEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEE
T ss_pred EEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC---------EEEEcCCCCeEEEeeCCCCcc
Confidence 34444444 555555555544433 55667889999999999986 899999999999999999999
Q ss_pred EEEeeC-CCCCeEEEEECC----------CCCEEEEEeCCCcEEEEeCCCC-eeEEEEecC-CCEEEEEECCCCCEEEEE
Q 010794 422 LYSLNG-HREPVYSLAFSP----------TGEYLASGSLDKSMHIWSLKEG-KIVKTYTGN-GGIFEVCWNKEGDKIAAC 488 (501)
Q Consensus 422 ~~~~~~-h~~~v~~l~~sp----------dg~~lasgs~Dg~i~iw~~~~~-~~~~~~~~~-~~i~~~~ws~~g~~la~~ 488 (501)
+..+.+ |...|++++|+| ++++||+|+.||.|++|++.++ +.+..+.++ ..|.+++|+|+|+ |+++
T Consensus 523 ~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~ 601 (615)
T 1pgu_A 523 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSS 601 (615)
T ss_dssp EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEE
T ss_pred eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEe
Confidence 999988 999999999999 9999999999999999999997 677777654 5699999999999 9999
Q ss_pred ECCCeEEEEEee
Q 010794 489 FANHTVCVLDFR 500 (501)
Q Consensus 489 ~~d~~v~v~~~~ 500 (501)
+.|++|+||++.
T Consensus 602 ~~d~~v~iw~~~ 613 (615)
T 1pgu_A 602 GADACIKRWNVV 613 (615)
T ss_dssp ETTSCEEEEEEC
T ss_pred cCCceEEEEeee
Confidence 999999999986
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.8e-42 Score=364.71 Aligned_cols=293 Identities=25% Similarity=0.437 Sum_probs=247.2
Q ss_pred EEccCCccceeEEEECCCC-CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 147 TILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~-~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
..|++|++.|++|+|+|++ .+|+|||.|++|++|++....... . .... ...+|...|.+++|+|+++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~-------~-~~~~----~~~~h~~~v~~v~~s~~g~ 443 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-------G-VAQR----RLTGHSHFVEDVVLSSDGQ 443 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS-------C-EEEE----EEECCSSCEEEEEECTTSS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc-------c-cccc----eecCCCCcEEEEEECCCCC
Confidence 4689999999999999975 799999999999999987543210 0 1111 2234678899999999999
Q ss_pred EEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 226 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
+|++|+.||.|+|||+.. .....+.+|...|++++|+|++.+|++|+.|++|++||+....... +
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-~------------- 509 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT-I------------- 509 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-E-------------
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-e-------------
Confidence 999999999999999865 4556788999999999999999999999999999999975432110 0
Q ss_pred CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCC--CEEEEEeCCCeEEEEeCCCCceeeecccCCCCEE
Q 010794 305 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG--SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 382 (501)
Q Consensus 305 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~--~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~ 382 (501)
.....+|...|.+++|+|++ .+|++|+.|++|++||+++.++...+..|...|.
T Consensus 510 ------------------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~ 565 (694)
T 3dm0_A 510 ------------------------SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVS 565 (694)
T ss_dssp ------------------------CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------------------------ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 01124688899999999987 6899999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010794 383 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 462 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 462 (501)
+++|+|++. +|++|+.||.|++||+++++.+..+.. ...|.+++|+|++.+|++++ ++.|+|||+.+++
T Consensus 566 ~v~~spdg~---------~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 566 TVAVSPDGS---------LCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp EEEECTTSS---------EEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred EEEEeCCCC---------EEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC
Confidence 999999986 899999999999999999999988875 46799999999999888776 5569999999998
Q ss_pred eEEEEecC--------------------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 463 IVKTYTGN--------------------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 463 ~~~~~~~~--------------------~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++..+..+ ..+.+++|+|+|++|++|+.||+|+||++.
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 635 IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 87766421 126789999999999999999999999985
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-41 Score=329.32 Aligned_cols=297 Identities=19% Similarity=0.324 Sum_probs=256.2
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
...|.+|...|++++|+|++++|++|+.||.|++|++.++.. ...+ ..|...|.+++|+|+++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-------------~~~~----~~h~~~v~~~~~~~~~~ 87 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER-------------LGTL----DGHTGTIWSIDVDCFTK 87 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE-------------EEEE----CCCSSCEEEEEECTTSS
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh-------------hhhh----hhcCCcEEEEEEcCCCC
Confidence 356899999999999999999999999999999999876532 1112 24567899999999999
Q ss_pred EEEEEeCCCeEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEEecC-----CeEEEEeCCCcceeEeeeeccCCeE
Q 010794 226 LLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
+|++++.||.|++|++... ....+. |..+|.+++|+|++.+|++++.+ +.|++||+........+..
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------ 160 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK------ 160 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE------
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc------
Confidence 9999999999999998754 444444 88999999999999999999999 9999999876543222111
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCC--ceeEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cceeeeccc
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQG--EVNCVKWDPTGSLLASCSDDVTAKIWNMKQ-DKYVHDLRE 376 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~ 376 (501)
....++..+.+|.+ .+.+++|+|++++|++++.||.|++||+.+ ...+..+..
T Consensus 161 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 161 ------------------------VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp ------------------------ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC
T ss_pred ------------------------cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec
Confidence 11223445556666 899999999999999999999999999998 778888889
Q ss_pred CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCC-----
Q 010794 377 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK----- 451 (501)
Q Consensus 377 ~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg----- 451 (501)
|...|.+++|+|++. +|++++.||.|++||+++++.+..+. +...+.+++|+|++++|++++.++
T Consensus 217 ~~~~v~~~~~~~~~~---------~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 286 (369)
T 3zwl_B 217 HEKSISDMQFSPDLT---------YFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVT 286 (369)
T ss_dssp CSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-----
T ss_pred CCCceeEEEECCCCC---------EEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEE
Confidence 999999999999886 78999999999999999999988888 778899999999999999999988
Q ss_pred ---------cEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 452 ---------SMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 452 ---------~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.|++|++.+++.+..+.++ ..|.+++|+|+|++||+|+.||.|+||+++
T Consensus 287 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 287 TTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp --------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 8999999999998888764 569999999999999999999999999985
No 29
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-42 Score=372.23 Aligned_cols=332 Identities=14% Similarity=0.193 Sum_probs=260.6
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
...||...|++++|+|++++||+|+.||+|+||+..... .... ..+...|.+++|+| |++|
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~-------------~~~~-----~~~~~~V~~l~fsp-g~~L 72 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE-------------VVIK-----LEDRSAIKEMRFVK-GIYL 72 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCE-------------EEEE-----CSSCCCEEEEEEET-TTEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE-------------EEEE-----cCCCCCEEEEEEcC-CCEE
Confidence 345899999999999999999999999999999975431 1111 12456899999999 8899
Q ss_pred EEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCccee-----------Eeeeecc
Q 010794 228 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-----------QQFEFHS 295 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-----------~~~~~~~ 295 (501)
++++.|+.|+|||+.. .....+. |.+.|++++|+|++++|++|+.||+|++||+.++... ..+..|.
T Consensus 73 ~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 9999999999999864 4444554 7789999999999999999999999999999987753 1234577
Q ss_pred CCeEEEecCCC--ceEEEecCCCeEEEEEcCCCcceeeecCC------------------CCceeEEEEcCCCCEEEEEe
Q 010794 296 GPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGH------------------QGEVNCVKWDPTGSLLASCS 355 (501)
Q Consensus 296 ~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h------------------~~~v~~v~~~~~~~~l~s~s 355 (501)
+++.++.|.+. ..+++++.|+.| +|++...+++..+.+| ...|++++|+|+|++||+|+
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 88999999764 578899999999 9999999888888766 46799999999999999999
Q ss_pred CCCeEEEEeCCCCceeee--cc---c-------------CCCCEEEEEEcC----CCC-----C-CC-------------
Q 010794 356 DDVTAKIWNMKQDKYVHD--LR---E-------------HSKEIYTIRWSP----TGS-----G-TN------------- 394 (501)
Q Consensus 356 ~Dg~i~iwd~~~~~~~~~--~~---~-------------~~~~v~~i~~~p----~g~-----~-~~------------- 394 (501)
.||+|++||+++++++.. +. . |...|++++|++ ++. + ..
T Consensus 231 ~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 231 EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 999999999998877542 21 1 244799999953 210 0 00
Q ss_pred --------------------------------------------CC-----CCcEEEEEEeCCCeEEEEeCCCCeEEEE-
Q 010794 395 --------------------------------------------NP-----NQQLILASASFDSTVKLWDVELGKLLYS- 424 (501)
Q Consensus 395 --------------------------------------------~~-----~~~~~l~sgs~dg~i~iwd~~~~~~~~~- 424 (501)
.| .....+++++.||.|++|++.++.....
T Consensus 311 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~ 390 (902)
T 2oaj_A 311 GYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKA 390 (902)
T ss_dssp EECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCG
T ss_pred CCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccc
Confidence 00 0011456677889999999877643321
Q ss_pred ----------------------------------------eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010794 425 ----------------------------------------LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV 464 (501)
Q Consensus 425 ----------------------------------------~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~ 464 (501)
+.+|...+.+++|+|++++||||+.|++|++||+.++.+.
T Consensus 391 ~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~ 470 (902)
T 2oaj_A 391 SLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQ 470 (902)
T ss_dssp GGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTT
T ss_pred ccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCcccc
Confidence 2344445555667899999999999999999999887532
Q ss_pred --EEE----------ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 465 --KTY----------TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 465 --~~~----------~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
..+ .+...|++++|+|+|++||+|+.||+|+||++.
T Consensus 471 ~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 471 DNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp TTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 111 123469999999999999999999999999985
No 30
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.9e-41 Score=350.23 Aligned_cols=345 Identities=17% Similarity=0.262 Sum_probs=281.2
Q ss_pred CceEEccCCccc-eeEEEECC--CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE
Q 010794 144 SDVTILEGHTSE-VCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 220 (501)
Q Consensus 144 ~~~~~l~~H~~~-V~~~~~sp--~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 220 (501)
.....+.+|... |++++|+| ++++|++|+.||.|++|++.++.... ........ ....+...|.+++|
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~-----~~~~~~~~----~~~~~~~~v~~~~~ 124 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN-----SVEVNVKS----EFQVLAGPISDISW 124 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT-----EEEEEEEE----EEECCSSCEEEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc-----cccccccc----hhhcccccEEEEEE
Confidence 456789999999 99999999 99999999999999999986431100 00011111 22335678999999
Q ss_pred CCCCCEEEEEeCC----CeEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeecc
Q 010794 221 NGEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 221 s~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
+|++++|++++.+ +.|++|+ .+.....+.+|...|++++|+|++. .|++++.|++|++||+.+++....+..|.
T Consensus 125 s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 125 DFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp CTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS
T ss_pred eCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC
Confidence 9999999999988 7999999 4556678889999999999999998 89999999999999999999999998898
Q ss_pred C---CeEEEecCCC--ceEEEecCCCeEEEEEcCCCcceeee-c---CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q 010794 296 G---PTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTF-A---GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 366 (501)
Q Consensus 296 ~---~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~-~---~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~ 366 (501)
. .+.++.|.++ ..+++++.|+.|++|++..++++..+ . +|...|.+++|+ ++.+|++++.|+.|++||+.
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 8 8999999754 57888999999999999999999888 6 899999999999 99999999999999999998
Q ss_pred CCceeeecc---------------------------------------------cCCCCEEEEEEcCC------------
Q 010794 367 QDKYVHDLR---------------------------------------------EHSKEIYTIRWSPT------------ 389 (501)
Q Consensus 367 ~~~~~~~~~---------------------------------------------~~~~~v~~i~~~p~------------ 389 (501)
+++.+..+. .|...|.+++| |+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~ 361 (615)
T 1pgu_A 283 TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIME 361 (615)
T ss_dssp TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEE
T ss_pred CCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEE
Confidence 665443332 23333444443 22
Q ss_pred ---------------------CCCC-----------CC----------------CC-------------------C----
Q 010794 390 ---------------------GSGT-----------NN----------------PN-------------------Q---- 398 (501)
Q Consensus 390 ---------------------g~~~-----------~~----------------~~-------------------~---- 398 (501)
+... .. |+ .
T Consensus 362 w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (615)
T 1pgu_A 362 WSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 441 (615)
T ss_dssp TTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceee
Confidence 1100 00 00 0
Q ss_pred --------------cEEEEEEeC-CCeEEEEeCCCCeEE-EEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010794 399 --------------QLILASASF-DSTVKLWDVELGKLL-YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 462 (501)
Q Consensus 399 --------------~~~l~sgs~-dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 462 (501)
..+|++++. |+.|++||+..++.. ..+.+|...|++++|+|+|++|++|+.||.|++|++.+++
T Consensus 442 ~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 521 (615)
T 1pgu_A 442 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE 521 (615)
T ss_dssp EEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc
Confidence 225677777 888888888876655 6677899999999999999999999999999999999999
Q ss_pred eEEEEec--CCCEEEEEECC----------CCCEEEEEECCCeEEEEEee
Q 010794 463 IVKTYTG--NGGIFEVCWNK----------EGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 463 ~~~~~~~--~~~i~~~~ws~----------~g~~la~~~~d~~v~v~~~~ 500 (501)
.+..+.+ ...|.+++|+| +|++||+|+.|+.|+|||+.
T Consensus 522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 571 (615)
T 1pgu_A 522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571 (615)
T ss_dssp EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence 9888764 45699999999 99999999999999999975
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.8e-42 Score=342.38 Aligned_cols=320 Identities=13% Similarity=0.183 Sum_probs=264.2
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
..+++++|+|++++|++|+.|+.|++|++.++...... .. ...+....|++++++|++|+.|
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~l~~~~~d 118 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML-----------------KR-ADYTAVDTAKLQMRRFILGTTE 118 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTS-----------------CS-CCEEEEEEECSSSCEEEEEETT
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEE-----------------ec-CCceEEEEEecCCCEEEEEECC
Confidence 34568999999999999999999999998765322111 11 1334555789999999999999
Q ss_pred CeEEEEECCCce-eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEE
Q 010794 234 GQARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFAT 311 (501)
Q Consensus 234 g~i~iw~~~~~~-~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 311 (501)
|.|++|+..... ...+.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+..|...+.++.|.+ ...+++
T Consensus 119 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 198 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLS 198 (420)
T ss_dssp SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEE
Confidence 999999987554 445579999999999999999999999999999999999999999999999999999964 567889
Q ss_pred ecCCCeEEEEEcCCCcceeeecCC---CCc---------------------eeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 010794 312 SSTDNMIYVCKIGENRPIKTFAGH---QGE---------------------VNCVKWDPTGSLLASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 312 ~~~d~~i~~~~~~~~~~~~~~~~h---~~~---------------------v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~ 367 (501)
++.|+.|++|++..++++..+..| ... +.+++|+|++++|++|+.||.|++||+++
T Consensus 199 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 199 ASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT
T ss_pred EcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999999888887753 333 44455678999999999999999999999
Q ss_pred Cceeeecc-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeC-CCCCeEEEEECCCCCEE
Q 010794 368 DKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNG-HREPVYSLAFSPTGEYL 444 (501)
Q Consensus 368 ~~~~~~~~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~-h~~~v~~l~~spdg~~l 444 (501)
++.+..+. .|...+.+++|+|++. .+|++|+.||.|++||+++++. +..+.+ |..+|+++.| |++++|
T Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~--------~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l 349 (420)
T 3vl1_A 279 KEQTIQLPSKFTCSCNSLTVDGNNA--------NYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALF 349 (420)
T ss_dssp CCEEEEECCTTSSCEEEEEECSSCT--------TEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEE
T ss_pred CceeEEcccccCCCceeEEEeCCCC--------CEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEE
Confidence 88776654 4788999999999875 2789999999999999998753 666666 6678888865 578899
Q ss_pred EEEeCCCcEEEEeCCCCee----------EEEEecCCCEEEEEECCCCC---EEEEEECCCeEEEEEee
Q 010794 445 ASGSLDKSMHIWSLKEGKI----------VKTYTGNGGIFEVCWNKEGD---KIAACFANHTVCVLDFR 500 (501)
Q Consensus 445 asgs~Dg~i~iw~~~~~~~----------~~~~~~~~~i~~~~ws~~g~---~la~~~~d~~v~v~~~~ 500 (501)
++++.||.|++|++.+... .........+.+++|+|+|+ .|++++.+|.+.+|++.
T Consensus 350 ~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 350 VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEecc
Confidence 9999999999999876321 12223345689999999999 88888889999999874
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-41 Score=334.98 Aligned_cols=285 Identities=15% Similarity=0.253 Sum_probs=238.4
Q ss_pred eEEccCCccceeEEEECCCC-CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-C
Q 010794 146 VTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-E 223 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~-~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-~ 223 (501)
...+.+|...|++++|+|++ ++|++|+.||.|+||++.++... .. + ...+|...|.+++|+| +
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----------~~--~--~~~~h~~~v~~~~~~~~~ 130 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT-----------SF--I--QGMGPGDAITGMKFNQFN 130 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE-----------EE--E--CCCSTTCBEEEEEEETTE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc-----------ee--e--ecCCcCCceeEEEeCCCC
Confidence 45788999999999999999 99999999999999999865421 00 1 1124678899999999 7
Q ss_pred CCEEEEEeCCCeEEEEECCCceeEeecCC---CCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEE
Q 010794 224 GTLLATGSYDGQARIWSTNGDLKCTLSKH---KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 300 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~~~~~~~~h---~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (501)
+.+|++|+.|+.|++|+..+.....+..| ...|.+++|+|++.+|++|+.|++|++||++ +.
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-------------- 195 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-------------- 195 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--------------
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--------------
Confidence 89999999999999999987766666544 4889999999999999999999999999984 22
Q ss_pred EecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEeCCC----Cceeeecc
Q 010794 301 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQ----DKYVHDLR 375 (501)
Q Consensus 301 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~i~iwd~~~----~~~~~~~~ 375 (501)
++..+.+|...|.+++|+|+++ +|++|+.|+.|++||+++ +.++..+
T Consensus 196 ---------------------------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~- 247 (383)
T 3ei3_B 196 ---------------------------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM- 247 (383)
T ss_dssp ---------------------------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-
T ss_pred ---------------------------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-
Confidence 2334567889999999999999 999999999999999987 5555555
Q ss_pred cCCCCEEEEEEcC-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----------------CCeEEEEE
Q 010794 376 EHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----------------EPVYSLAF 437 (501)
Q Consensus 376 ~~~~~v~~i~~~p-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----------------~~v~~l~~ 437 (501)
.|...+.+++|+| ++. +|++++.|+.|++||+++++.+..+.+|. ..+..++|
T Consensus 248 ~~~~~v~~~~~s~~~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 248 PHEKPVNAAYFNPTDST---------KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp ECSSCEEEEEECTTTSC---------EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred cCCCceEEEEEcCCCCC---------EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 6899999999999 876 78999999999999999887766665442 33455777
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+|+|++ +|+.|+.|++||+.+++.+..+.+ .+.+..++|+|+|++||+|+ |+.|.|||++
T Consensus 319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 777777 778999999999999999988875 23466679999999999997 9999999985
No 33
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-40 Score=335.52 Aligned_cols=319 Identities=22% Similarity=0.350 Sum_probs=267.5
Q ss_pred eEEccCCccce-eEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 146 VTILEGHTSEV-CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 146 ~~~l~~H~~~V-~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
...+.+|...| +++.| ++.+|+||+.||+|++||+.++.. +..+ .+|...|++++|++++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~-------------~~~~----~~h~~~V~~l~~~~~~ 174 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKF-------------LLQL----SGHDGGVWALKYAHGG 174 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEE-------------EEEE----CCCSSCEEEEEECSTT
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcE-------------EEEE----eCCCcCEEEEEEcCCC
Confidence 46788999885 66665 678999999999999999876531 1222 2467889999999988
Q ss_pred CEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEec--CCCCEEEEEecCCeEEEEeCCCcce--------------
Q 010794 225 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWN--KKGDYLLTGSCDKTAIVWDVKTEEW-------------- 287 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~--~~~~~l~s~s~D~~i~iwd~~~~~~-------------- 287 (501)
+|++|+.||.|++|+... .....+.+|.++|.+++|+ +++.+|++|+.|++|++||+.++..
T Consensus 175 -~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 175 -ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred -EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 999999999999999864 4566788999999999998 5778999999999999999987653
Q ss_pred ---------eEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCC
Q 010794 288 ---------KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV 358 (501)
Q Consensus 288 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg 358 (501)
...+..|...+.++.. ....+++++.|+.|++|++...+++..+.+|...|.+++|+|++++|++|+.||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg 332 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT 332 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred eccCCCeEEEEEccCccceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 3345556666766643 345788899999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEEC
Q 010794 359 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS 438 (501)
Q Consensus 359 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 438 (501)
.|++||+.+++.+..+..|...|.+++|++. +|++|+.||.|++||+.++....... |...+..++|+
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-----------~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~ 400 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHTALVGLLRLSDK-----------FLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFY 400 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSS-----------EEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEE
T ss_pred cEEEEECCCCcEEEEEeCCCCcEEEEEEcCC-----------EEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEE
Confidence 9999999999999999999999999999742 79999999999999999988777665 66778889999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeeEEEE--ecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 439 PTGEYLASGSLDKSMHIWSLKEGKIVKTY--TGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 439 pdg~~lasgs~Dg~i~iw~~~~~~~~~~~--~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
|++++|++|+ ||.|++||+.+++++..+ .....|.+++|+ ....+++++.++.+.+|-+
T Consensus 401 ~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 401 VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 9999999999 999999999999988753 334569999997 3345555566776655533
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.2e-41 Score=361.95 Aligned_cols=327 Identities=23% Similarity=0.335 Sum_probs=281.6
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
.+.+.+|.+.|++++|||++++||+|+.||.|+|||+.++.. ...+ ..|..+|++++|+|+++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-------------~~~~----~~~~~~v~~~~~s~~~~ 68 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-------------VRSI----QVTETPVRAGKFIARKN 68 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------------EEEE----ECCSSCEEEEEEEGGGT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce-------------EEEE----ecCCCcEEEEEEeCCCC
Confidence 467899999999999999999999999999999999876531 1122 23567899999999999
Q ss_pred EEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc-ceeEeeeeccCCeEEEec
Q 010794 226 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~ 303 (501)
+|++|+.||.|++|+.. +.....+.+|.+.|++++|+|++.+|++|+.|++|++||+.++ .....+..|..++.++.|
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 99999999999999976 4566778899999999999999999999999999999999887 667788889999999999
Q ss_pred CC--CceEEEecCCCeEEEEEcCCCcceeeecCCC-CceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeeecccCC
Q 010794 304 RN--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 378 (501)
Q Consensus 304 ~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 378 (501)
.+ ...+++++.|+.|++|++....+...+..+. ..+.+++|+| ++.+|++|+.||.|++||+.++..+..+..|.
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~ 228 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM 228 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 75 4578899999999999998888777776655 8899999999 99999999999999999999999999999999
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCC--EEEEEeCCCcEEEE
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE--YLASGSLDKSMHIW 456 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~--~lasgs~Dg~i~iw 456 (501)
..+.+++|+|++. +|++|+.||.|++||+.+++.+..+..|...|.+++|+|+|. +++++ .++.+.+|
T Consensus 229 ~~v~~~~~~~~~~---------~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~ 298 (814)
T 3mkq_A 229 SNVSFAVFHPTLP---------IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG-FDNGFTVL 298 (814)
T ss_dssp SCEEEEEECSSSS---------EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEE-ETTEEEEE
T ss_pred CCEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEE-eCCCEEEE
Confidence 9999999999986 799999999999999999999999999999999999999987 45555 46678888
Q ss_pred eCCCCe----------eEEEE---------------------------------e-cCCCEEEEEECCCCCEEEEEECCC
Q 010794 457 SLKEGK----------IVKTY---------------------------------T-GNGGIFEVCWNKEGDKIAACFANH 492 (501)
Q Consensus 457 ~~~~~~----------~~~~~---------------------------------~-~~~~i~~~~ws~~g~~la~~~~d~ 492 (501)
++..+. .+... . ....+.+++|+|+|++||+++ ++
T Consensus 299 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~ 377 (814)
T 3mkq_A 299 SLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DG 377 (814)
T ss_dssp ECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TT
T ss_pred EcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CC
Confidence 876432 22110 0 011357899999999999988 88
Q ss_pred eEEEEEee
Q 010794 493 TVCVLDFR 500 (501)
Q Consensus 493 ~v~v~~~~ 500 (501)
.+.||+++
T Consensus 378 ~~~i~~~~ 385 (814)
T 3mkq_A 378 EYVIYTAL 385 (814)
T ss_dssp EEEEEETT
T ss_pred EEEEEECc
Confidence 99999853
No 35
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=322.37 Aligned_cols=246 Identities=25% Similarity=0.460 Sum_probs=221.4
Q ss_pred EEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCE
Q 010794 147 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 226 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~ 226 (501)
..+.+|...|.+++|+|++.+++||+.|++|++||+.++.. +..+ ..+...+.+++|+|++++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~-------------~~~~----~~~~~~~~~~~~spdg~~ 136 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ-------------IKSI----DAGPVDAWTLAFSPDSQY 136 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------------EEEE----ECCTTCCCCEEECTTSSE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE-------------EEEE----eCCCccEEEEEECCCCCE
Confidence 46889999999999999999999999999999999976532 1111 123456889999999999
Q ss_pred EEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC
Q 010794 227 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 305 (501)
Q Consensus 227 l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (501)
|++|+.||.|++|+... .....+..|...|.+++|+|++++|++|+.|++|++||+++++.
T Consensus 137 l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~------------------ 198 (321)
T 3ow8_A 137 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL------------------ 198 (321)
T ss_dssp EEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------------
T ss_pred EEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE------------------
Confidence 99999999999999864 45567788999999999999999999999999999999987643
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEE
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 385 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 385 (501)
+..+.+|...|.+++|+|++++|++|+.|++|+|||++++..+..+.+|...|.+++
T Consensus 199 -----------------------~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 199 -----------------------LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 255 (321)
T ss_dssp -----------------------EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred -----------------------EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE
Confidence 234567888999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010794 386 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 386 ~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
|+|++. +|++|+.|++|++||+.+++++..+.+|...|++++|+|++++|++++.||+|++||..
T Consensus 256 ~sp~~~---------~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 256 FCPDDT---------HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ECCCCC---------EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999986 79999999999999999999999999999999999999999999999999999999963
No 36
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.6e-41 Score=332.70 Aligned_cols=295 Identities=21% Similarity=0.327 Sum_probs=253.6
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC--
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 223 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~-- 223 (501)
..++.+|...|++++|+| ++|++|+.||.|++|++.++...... .. ... ...|...|++++|+|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~-----~~--~~~----~~~h~~~v~~~~~~~~~~ 75 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPK-----DK--SYS----HFVHKSGLHHVDVLQAIE 75 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGG-----GG--EEE----EECCTTCEEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCC-----Cc--ceE----EecCCCcEEEEEEecccc
Confidence 467889999999999999 89999999999999999865421100 00 111 1245778999999999
Q ss_pred --C---CEEEEEeCCCeEEEEECCCce------eEeecCC-----CCCEEEEEec----CCCCE-EEEEecCCeEEEEeC
Q 010794 224 --G---TLLATGSYDGQARIWSTNGDL------KCTLSKH-----KGPIFSLKWN----KKGDY-LLTGSCDKTAIVWDV 282 (501)
Q Consensus 224 --~---~~l~sg~~dg~i~iw~~~~~~------~~~~~~h-----~~~V~~l~~~----~~~~~-l~s~s~D~~i~iwd~ 282 (501)
+ .+|++|+.||.|++|+..... ...+..| ...|++++|+ |++.+ |++|+.|+.|++||+
T Consensus 76 ~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 76 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp TTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred cCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 9 999999999999999976433 6677888 5999999999 99999 999999999999999
Q ss_pred CC------cceeE-----eee-------eccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC---C---CCc
Q 010794 283 KT------EEWKQ-----QFE-------FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG---H---QGE 338 (501)
Q Consensus 283 ~~------~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~---h---~~~ 338 (501)
.+ +.... .+. .|...+.++.|.++..+++++.|+.|++|++...+++..+.+ | ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc
Confidence 88 66555 663 367788899887544888899999999999999999999998 9 999
Q ss_pred eeEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeeeccc-------------CCCCEEEEEEcCCCCCCCCCCCcEEE
Q 010794 339 VNCVKWDPTGSLLASCSDD---VTAKIWNMKQDKYVHDLRE-------------HSKEIYTIRWSPTGSGTNNPNQQLIL 402 (501)
Q Consensus 339 v~~v~~~~~~~~l~s~s~D---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~i~~~p~g~~~~~~~~~~~l 402 (501)
|.+++|+|++++|++++.| |.|++||+.+++.+..+.. |...|.+++|+|++. +|
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l 306 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE---------TL 306 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS---------EE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC---------EE
Confidence 9999999999999999999 9999999999999998888 999999999999886 79
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEee------CC---------------CCCeEEEEECCCC----------CEEEEEeCCC
Q 010794 403 ASASFDSTVKLWDVELGKLLYSLN------GH---------------REPVYSLAFSPTG----------EYLASGSLDK 451 (501)
Q Consensus 403 ~sgs~dg~i~iwd~~~~~~~~~~~------~h---------------~~~v~~l~~spdg----------~~lasgs~Dg 451 (501)
++++.||.|++||+.+++.+..+. +| ..+|++++|+|+| ++|++|+.||
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT
T ss_pred EEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC
Confidence 999999999999999999999999 88 9999999999998 7999999999
Q ss_pred cEEEEeCCCCe
Q 010794 452 SMHIWSLKEGK 462 (501)
Q Consensus 452 ~i~iw~~~~~~ 462 (501)
.|++|++.+|+
T Consensus 387 ~i~iw~~~~g~ 397 (397)
T 1sq9_A 387 SIRWFREAGGK 397 (397)
T ss_dssp EEEEEEEEC--
T ss_pred cEEEEEcCCCC
Confidence 99999998764
No 37
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-40 Score=374.59 Aligned_cols=336 Identities=21% Similarity=0.345 Sum_probs=285.2
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
...+.+|.+.|++++|+|+|++|++|+.||+|++|++.++.. +..+ ..|...|.+++|+|+++
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-------------~~~~----~~h~~~v~~~~~s~~~~ 670 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-------------LLDI----KAHEDEVLCCAFSSDDS 670 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------------EEEE----CCCSSCEEEEEECTTSS
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-------------EEEe----ccCCCCEEEEEEecCCC
Confidence 457889999999999999999999999999999999987642 1122 24578899999999999
Q ss_pred EEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecC--CCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEe
Q 010794 226 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~--~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (501)
+|++|+.||.|+||+.. +.....+.+|...|++++|+| ++.++++|+.|++|++||+.++.....+..|..++.++.
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~ 750 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCR 750 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEE
Confidence 99999999999999986 456678889999999999999 456899999999999999999999999999999999999
Q ss_pred cCC-CceEEEecCCCeEEEEEcCCCcceeee-------------------------------------------------
Q 010794 303 WRN-NVSFATSSTDNMIYVCKIGENRPIKTF------------------------------------------------- 332 (501)
Q Consensus 303 ~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~------------------------------------------------- 332 (501)
|.+ ...+++++.|+.|++|++........+
T Consensus 751 ~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 865 457889999999999998654322211
Q ss_pred ------cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCC-------------
Q 010794 333 ------AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT------------- 393 (501)
Q Consensus 333 ------~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~------------- 393 (501)
.+|...|.+++|+|+++++++++.||.|++||+.++..+..+.+|...|.+++|+|++...
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 2678899999999999999999999999999999999999999999999999999987510
Q ss_pred ----------------------------------------------------------CCCCCcEEEEEEeCCCeEEEEe
Q 010794 394 ----------------------------------------------------------NNPNQQLILASASFDSTVKLWD 415 (501)
Q Consensus 394 ----------------------------------------------------------~~~~~~~~l~sgs~dg~i~iwd 415 (501)
..|+. .++++|+.+|.|++|+
T Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~g~~~g~i~i~d 989 (1249)
T 3sfz_A 911 TKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL-EYVAFGDEDGAIKIIE 989 (1249)
T ss_dssp HHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS-SEEEEEETTSCCEEEE
T ss_pred ccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC-CEEEEEcCCCCEEEEE
Confidence 00111 1355566666666666
Q ss_pred CCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEE
Q 010794 416 VELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVC 495 (501)
Q Consensus 416 ~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~ 495 (501)
+.+++.+..+.+|...|++++|+|+|++|++++.||.|++|++.+++.+........+.+++|+|++ .+++++.|++|.
T Consensus 990 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~ 1068 (1249)
T 3sfz_A 990 LPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVK 1068 (1249)
T ss_dssp TTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEE
T ss_pred cCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEE
Confidence 6667777778889999999999999999999999999999999999887666666779999999976 678899999999
Q ss_pred EEEee
Q 010794 496 VLDFR 500 (501)
Q Consensus 496 v~~~~ 500 (501)
+||+.
T Consensus 1069 vwd~~ 1073 (1249)
T 3sfz_A 1069 VWNVI 1073 (1249)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99974
No 38
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=324.33 Aligned_cols=252 Identities=19% Similarity=0.264 Sum_probs=208.0
Q ss_pred cCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEE
Q 010794 150 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 229 (501)
Q Consensus 150 ~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~s 229 (501)
..|..+|++++|+|++ .|++|+.||+|+|||+.++.... . ......+|...|++++|+|+|++|++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~--------~-----~~~~~~~H~~~V~~v~~spdg~~l~s 144 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLI--------V-----SKFCKYEHDDIVSTVSVLSSGTQAVS 144 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCE--------E-----EEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCcee--------E-----eeccccCCCCCEEEEEECCCCCEEEE
Confidence 3467889999999985 67899999999999998765321 1 11112346788999999999999999
Q ss_pred EeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc
Q 010794 230 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 307 (501)
Q Consensus 230 g~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (501)
|+.|++|+|||+.. .....+.+|.+.|++++|+|++. +|++|+.|++|++||+++++....+.
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--------------- 209 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG--------------- 209 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------------
T ss_pred EeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeee---------------
Confidence 99999999999864 56678899999999999999884 78999999999999998876443321
Q ss_pred eEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEE
Q 010794 308 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 386 (501)
Q Consensus 308 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 386 (501)
...|...+.+++|+|+ +++|++|+.||+|+|||+++++++..+.+|...|++++|
T Consensus 210 ------------------------~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 210 ------------------------CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp ----------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEE
T ss_pred ------------------------cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 1234556889999995 578899999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCee
Q 010794 387 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEGKI 463 (501)
Q Consensus 387 ~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~~~ 463 (501)
+|++. .+|++|+.|++|+|||+.+++++ .+.+|...|++|+|+|++. +|++||.|++|++|++.+..+
T Consensus 266 sp~g~--------~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 266 SPHSV--------PFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CSSSS--------CCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred ccCCC--------eEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 99874 27899999999999999988754 6789999999999999986 577999999999999987544
No 39
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-41 Score=362.20 Aligned_cols=333 Identities=9% Similarity=0.091 Sum_probs=250.2
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeec---cccccCCCCeEEEEECC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK---GRTNEKSKDVTTLDWNG 222 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~V~~~~~s~ 222 (501)
+..+. |...|++++|+|++++|++|+.||+|++||+.++... .+.+.... .....|...|++++|+|
T Consensus 92 ~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~---------~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS---------SFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE---------EEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc---------cceeccccccccccccCCCCeEEEEEcc
Confidence 44554 6789999999999999999999999999999765310 00110000 12245678999999999
Q ss_pred C-CCEEEEEeCCCeEEEEECCCc-eeEeecCC------------------CCCEEEEEecCCCCEEEEEecCCeEEEEeC
Q 010794 223 E-GTLLATGSYDGQARIWSTNGD-LKCTLSKH------------------KGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 282 (501)
Q Consensus 223 ~-~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h------------------~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~ 282 (501)
+ +.+|++|+.||.| +||+... ....+..| ...|++++|+|+|.+|++|+.|++|++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6 5789999999999 9998754 33445444 578999999999999999999999999999
Q ss_pred CCcceeEe--ee---e-------------ccCCeEEEecC----CC--c-------------------------------
Q 010794 283 KTEEWKQQ--FE---F-------------HSGPTLDVDWR----NN--V------------------------------- 307 (501)
Q Consensus 283 ~~~~~~~~--~~---~-------------~~~~~~~~~~~----~~--~------------------------------- 307 (501)
++++.+.. +. . +..++..+.|. ++ .
T Consensus 241 ~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s 320 (902)
T 2oaj_A 241 NSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITS 320 (902)
T ss_dssp TTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCC
T ss_pred CCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccc
Confidence 88765442 10 0 12234444441 11 1
Q ss_pred ---------------------------------------------eEEEecCCCeEEEEEcCCCcceee-----------
Q 010794 308 ---------------------------------------------SFATSSTDNMIYVCKIGENRPIKT----------- 331 (501)
Q Consensus 308 ---------------------------------------------~~~~~~~d~~i~~~~~~~~~~~~~----------- 331 (501)
.+++.+.|+.|++|++..+.++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~ 400 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWL 400 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTB
T ss_pred hhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccccc
Confidence 123333456666676644322111
Q ss_pred ------------------------------ecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee--e----cc
Q 010794 332 ------------------------------FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH--D----LR 375 (501)
Q Consensus 332 ------------------------------~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~--~----~~ 375 (501)
+.||...+.+++|+|++++||||+.|++|++||+.++.... . +.
T Consensus 401 ~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~ 480 (902)
T 2oaj_A 401 RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLS 480 (902)
T ss_dssp TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHH
T ss_pred CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeech
Confidence 23344445556668999999999999999999998774321 1 11
Q ss_pred -----cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-------------------------------
Q 010794 376 -----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------------------------------- 419 (501)
Q Consensus 376 -----~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------------------------------- 419 (501)
+|...|.+++|+|++. +||+|+.||+|+||++.++
T Consensus 481 ~~~~~~h~~~V~svafspdg~---------~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (902)
T 2oaj_A 481 RTLNKAKELAVDKISFAAETL---------ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV 551 (902)
T ss_dssp HHTTCSSSCCEEEEEEETTTT---------EEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred hhcCCCCCCceeEEEecCCCC---------eEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence 6888999999999997 8999999999999998765
Q ss_pred --------------eEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE-----Ee-c-CCCEEEEEE
Q 010794 420 --------------KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT-----YT-G-NGGIFEVCW 478 (501)
Q Consensus 420 --------------~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~-----~~-~-~~~i~~~~w 478 (501)
+++..+.+|.++|++|+||||| +||+|+.|++|++||+.++.++.. +. + ...|++++|
T Consensus 552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~F 630 (902)
T 2oaj_A 552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEF 630 (902)
T ss_dssp ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEE
T ss_pred cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEE
Confidence 3467888999999999999999 999999999999999988877642 21 3 345999999
Q ss_pred C-----CCC---CEEEEEECCCeEEEEEe
Q 010794 479 N-----KEG---DKIAACFANHTVCVLDF 499 (501)
Q Consensus 479 s-----~~g---~~la~~~~d~~v~v~~~ 499 (501)
+ ||| .+||+|+.|++|++||+
T Consensus 631 s~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 631 VIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 9 886 89999999999999998
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-41 Score=329.66 Aligned_cols=293 Identities=19% Similarity=0.343 Sum_probs=243.0
Q ss_pred EEccCCccceeEEEECCC----CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC
Q 010794 147 TILEGHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 222 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~----~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~ 222 (501)
..+.+|..+|++++|+|+ ..++++++.++.|++|++.++... ..+... ....+...|++++|+|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~----------~~~~~~--~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI----------RLLQSY--VDADADENFYTCAWTY 79 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE----------EEEEEE--ECSCTTCCEEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE----------Eeeeec--cccCCCCcEEEEEecc
Confidence 345689999999999994 456777777789999998765321 111111 1122567899999999
Q ss_pred C----CCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecC-CCCEEEEEecCCeEEEEeCCCcceeEeeeeccC
Q 010794 223 E----GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 296 (501)
Q Consensus 223 ~----~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 296 (501)
+ +.+|++|+.||.|++|+.. +.....+.+|..+|++++|+| ++.+|++|+.|++|++||+++++....+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----- 154 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF----- 154 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE-----
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe-----
Confidence 9 6799999999999999976 456677889999999999999 8999999999999999999876533221
Q ss_pred CeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeccc
Q 010794 297 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 376 (501)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 376 (501)
..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+..
T Consensus 155 ---------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 155 ---------------------------------GGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp ---------------------------------CSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHH
T ss_pred ---------------------------------cccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccce
Confidence 11256888999999999999999999999999999998766554443
Q ss_pred ----------------------------CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--------
Q 010794 377 ----------------------------HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-------- 420 (501)
Q Consensus 377 ----------------------------~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-------- 420 (501)
|...|.+++|+ +. +|++++.||.|++||+.++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~---------~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD---------LILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT---------EEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC---------EEEEEecCCEEEEEeCCCcccccccccc
Confidence 88899999998 32 78999999999999988763
Q ss_pred ------EEEEeeCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCee----EEEEecC---CCEEEEEECCCCCEE
Q 010794 421 ------LLYSLNGHREPVYSLAFSPT--GEYLASGSLDKSMHIWSLKEGKI----VKTYTGN---GGIFEVCWNKEGDKI 485 (501)
Q Consensus 421 ------~~~~~~~h~~~v~~l~~spd--g~~lasgs~Dg~i~iw~~~~~~~----~~~~~~~---~~i~~~~ws~~g~~l 485 (501)
.+..+.+|...|++++|+|+ +++|++|+.||.|++|++.+++. ...+..+ ..|.+++|+|+|++|
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 350 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL 350 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE
Confidence 47888999999999999999 99999999999999999998753 3456554 679999999999999
Q ss_pred EEEECCCeEEEEEee
Q 010794 486 AACFANHTVCVLDFR 500 (501)
Q Consensus 486 a~~~~d~~v~v~~~~ 500 (501)
|+|+.||.|+|||+.
T Consensus 351 ~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 351 IAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEeCCCEEEEEEec
Confidence 999999999999985
No 41
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.2e-42 Score=386.79 Aligned_cols=343 Identities=22% Similarity=0.305 Sum_probs=292.3
Q ss_pred ceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCC-ce------------------EEEEEeec
Q 010794 145 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP-LN------------------VLVLKHVK 205 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~-~~------------------~~~~~~~~ 205 (501)
.+..+.+|...|++++|+|+|++|+|++.|+.|++|++.+........... .. ........
T Consensus 874 ~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1249)
T 3sfz_A 874 KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKT 953 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESS
T ss_pred eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCc
Confidence 356778999999999999999999999999999999976432111100000 00 00000000
Q ss_pred -cccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCC
Q 010794 206 -GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 283 (501)
Q Consensus 206 -~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~ 283 (501)
.........|.+++|+|+++++++|+.+|.|++|+... .....+.+|...|++++|+|++++|++++.|++|++||+.
T Consensus 954 ~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 954 GQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp CCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred ceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 00112345799999999999999999999999999864 5566788999999999999999999999999999999999
Q ss_pred CcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q 010794 284 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 363 (501)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iw 363 (501)
++.... +..|...+.++.|.++..+++++.|+.|++|++.+++.+..+.+|.+.|.+++|+|++++|++++.||+|++|
T Consensus 1034 ~~~~~~-~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iw 1112 (1249)
T 3sfz_A 1034 TGDYVF-LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112 (1249)
T ss_dssp TTEEEC-CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEE
T ss_pred CCceEE-EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 987653 4567888999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe---------eCCCCCeEE
Q 010794 364 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL---------NGHREPVYS 434 (501)
Q Consensus 364 d~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---------~~h~~~v~~ 434 (501)
|+.++..+..+..|...|++++|+|++. +|++|+.||.|++||+.+++.+..+ .+|...|++
T Consensus 1113 d~~~~~~~~~l~~h~~~v~~~~~s~dg~---------~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 1183 (1249)
T 3sfz_A 1113 SFDLLSPLHELKGHNGCVRCSAFSLDGI---------LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTD 1183 (1249)
T ss_dssp CSSSSSCSBCCCCCSSCEEEEEECSSSS---------EEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCE
T ss_pred ECCCcceeeeeccCCCcEEEEEECCCCC---------EEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEE
Confidence 9999999999999999999999999986 8999999999999999998876654 678899999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 435 LAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 435 l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
++|+|+|++|++++ |.|++|++.+++.+..+..+ ..+.+++|+|+|++|++++.+|.|+||++
T Consensus 1184 l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1184 VCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp EEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred EEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEee
Confidence 99999999999986 89999999999988877654 45899999999999999999999999986
No 42
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-42 Score=349.36 Aligned_cols=323 Identities=15% Similarity=0.133 Sum_probs=241.8
Q ss_pred CccceeEEEECCCC---------CEEEE-------------------EECCCcEEEEecCCCCCCCCCCCCCceEEEEEe
Q 010794 152 HTSEVCACAWSPAG---------SLLAS-------------------GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH 203 (501)
Q Consensus 152 H~~~V~~~~~sp~~---------~~l~s-------------------gs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~ 203 (501)
+.+.|.+|+|+|++ ++||+ |+.|++|+||++.++... ......
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~---------~~~~~~ 202 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLH---------CVKVQT 202 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCC---------EEEEEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCC---------ceEEEE
Confidence 56777788887765 45554 668899999998765321 000011
Q ss_pred eccccccCCCCeEEEEECCC------CCEEEEEeCCCeEEEEECCCce------------eEeecCCCCCEEEEEecCCC
Q 010794 204 VKGRTNEKSKDVTTLDWNGE------GTLLATGSYDGQARIWSTNGDL------------KCTLSKHKGPIFSLKWNKKG 265 (501)
Q Consensus 204 ~~~~~~~~~~~V~~~~~s~~------~~~l~sg~~dg~i~iw~~~~~~------------~~~~~~h~~~V~~l~~~~~~ 265 (501)
+ ..+...|.+++|+|+ +.+|++|+.||+|+||++.... ...+.+|..+|++++|+++
T Consensus 203 l----~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~- 277 (524)
T 2j04_B 203 I----VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP- 277 (524)
T ss_dssp E----EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-
T ss_pred E----EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-
Confidence 1 124567999999996 5799999999999999986431 2367789999999999986
Q ss_pred CEEEEEecCCeEEEEeCCCcc-eeEeeeeccCCeEEE--ecCCC--ceEEEecCCCeEEEEEcCCCcceeeecCCCC--c
Q 010794 266 DYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDV--DWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQG--E 338 (501)
Q Consensus 266 ~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~--~ 338 (501)
..|++|+.||+|++||++++. ....+..|..+|.++ .|.++ ..|++++.|++|++||++..+++..+.+|.. .
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 489999999999999998764 445678899999998 56654 5789999999999999998887777777764 5
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010794 339 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 418 (501)
Q Consensus 339 v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 418 (501)
|.+++|+|+++.|++++.|++|++||++++.++..+.+|...|++++|+|++. +|++|+.||+|++||+..
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~---------~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP---------MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC---------BCEEEETTTEEECCBSCS
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC---------eEEEEECCCEEEEEechH
Confidence 88999999999999999999999999999988888899999999999999986 689999999999999864
Q ss_pred CeEEEEeeC-----CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEecC-CCEEEEEECCCCC---EEEEE
Q 010794 419 GKLLYSLNG-----HREPVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTGN-GGIFEVCWNKEGD---KIAAC 488 (501)
Q Consensus 419 ~~~~~~~~~-----h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~~-~~i~~~~ws~~g~---~la~~ 488 (501)
+ .+..++. +...|++++|+|+|..+. ... .+++|... ++..+.++.++ ..|++|+|+|++. .||+|
T Consensus 429 ~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg 504 (524)
T 2j04_B 429 R-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFS 504 (524)
T ss_dssp S-TTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEE
T ss_pred h-hccccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhh
Confidence 3 2211111 112478999999998553 222 23344433 45566666554 5699999999964 99999
Q ss_pred ECCCeEEEEEeeC
Q 010794 489 FANHTVCVLDFRM 501 (501)
Q Consensus 489 ~~d~~v~v~~~~~ 501 (501)
+.+|.|+||+++.
T Consensus 505 ~~~g~vrlw~l~~ 517 (524)
T 2j04_B 505 NSAGLLTLEYLSL 517 (524)
T ss_dssp CTTSEEEEEECSC
T ss_pred ccCceEEEEEccc
Confidence 9999999999863
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-40 Score=325.28 Aligned_cols=290 Identities=17% Similarity=0.243 Sum_probs=243.2
Q ss_pred ccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEE
Q 010794 149 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 228 (501)
Q Consensus 149 l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~ 228 (501)
+..|..+|++++|+|++++|++|+.|+.|++|++.++. ......+ ..|...|.+++|+|++++|+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-----------~~~~~~~----~~h~~~v~~~~~~~~~~~l~ 68 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----------WVQVHEL----KEHNGQVTGVDWAPDSNRIV 68 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-----------EEEEEEE----ECCSSCEEEEEEETTTTEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-----------EEeeeee----cCCCCcccEEEEeCCCCEEE
Confidence 45699999999999999999999999999999987642 0111222 24567899999999999999
Q ss_pred EEeCCCeEEEEECCCce---eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC
Q 010794 229 TGSYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 305 (501)
Q Consensus 229 sg~~dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (501)
+|+.||.|++|+..... ...+..|...|.+++|+|++++|++|+.|+.|++||+..+......
T Consensus 69 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~-------------- 134 (372)
T 1k8k_C 69 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC-------------- 134 (372)
T ss_dssp EEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE--------------
T ss_pred EEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee--------------
Confidence 99999999999986543 3345779999999999999999999999999999998765411100
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeC------------------CC
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM------------------KQ 367 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~------------------~~ 367 (501)
.....+|...|.+++|+|++++|++|+.||.|++||+ ..
T Consensus 135 -----------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (372)
T 1k8k_C 135 -----------------------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 191 (372)
T ss_dssp -----------------------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCT
T ss_pred -----------------------eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccch
Confidence 1123467889999999999999999999999999995 36
Q ss_pred CceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEE
Q 010794 368 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG 447 (501)
Q Consensus 368 ~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg 447 (501)
+..+..+..|...+.+++|+|++. +|++++.||.|++||+++++.+..+..|..+|++++|+|++.+|++|
T Consensus 192 ~~~~~~~~~~~~~v~~~~~~~~~~---------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 192 GELMFESSSSCGWVHGVCFSANGS---------RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp TCEEEECCCCSSCEEEEEECSSSS---------EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred hhheEecCCCCCeEEEEEECCCCC---------EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 677888889999999999999886 78999999999999999999999999999999999999999998888
Q ss_pred eCCCcEEEEeCCC--Cee--E------------------------------------EEE--ecCCCEEEEEEC-CCC--
Q 010794 448 SLDKSMHIWSLKE--GKI--V------------------------------------KTY--TGNGGIFEVCWN-KEG-- 482 (501)
Q Consensus 448 s~Dg~i~iw~~~~--~~~--~------------------------------------~~~--~~~~~i~~~~ws-~~g-- 482 (501)
.|+.|++|++.+ ++. + ..+ .+...|++++|+ ++|
T Consensus 263 -~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~ 341 (372)
T 1k8k_C 263 -HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAK 341 (372)
T ss_dssp -TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTS
T ss_pred -eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcc
Confidence 899999999987 531 0 111 223469999977 677
Q ss_pred -CEEEEEECCCeEEEEEee
Q 010794 483 -DKIAACFANHTVCVLDFR 500 (501)
Q Consensus 483 -~~la~~~~d~~v~v~~~~ 500 (501)
++||+|+.||.|+||+++
T Consensus 342 ~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 342 CSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CSEEEEEETTSEEEEEEHH
T ss_pred eeeEEEecCCCceEEEEec
Confidence 999999999999999974
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-40 Score=313.53 Aligned_cols=289 Identities=26% Similarity=0.361 Sum_probs=250.6
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
....++.+|.+.|++++| |++.+|++|+.||.|++|++.++.. ... ...+...|.+++|+|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~-------------~~~----~~~~~~~v~~~~~~~~ 70 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL-------------GTV----VYTGQGFLNSVCYDSE 70 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEE-------------EEE----EEECSSCEEEEEEETT
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE-------------EEE----eecCCccEEEEEECCC
Confidence 445789999999999999 9999999999999999999865421 111 1234678999999999
Q ss_pred CCEEEEEeCCCeEEEEECCC----ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 224 GTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
+.+|++|+.||.|++|++.. .....+.+|..+|.++.| ++++|++++.|++|++|| .+.....+..|..++.
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~ 146 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVW 146 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEE
T ss_pred CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCcee
Confidence 99999999999999999753 345577889999999999 577999999999999999 6667778888899998
Q ss_pred EEecC--CCceEEEecCCCeEEEEEcCCCcceeeecC-CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeccc
Q 010794 300 DVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 376 (501)
Q Consensus 300 ~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 376 (501)
.+.|. ....+++++.|+.|++|+ ....+..+.. |...+.+++|+|++. +++++.||.|++||+++++.+..+..
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc
Confidence 88874 567889999999999999 4556667777 889999999999998 89999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010794 377 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIW 456 (501)
Q Consensus 377 ~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw 456 (501)
|...+.+++|+|++. |++++.||.|++||+.+++.+..+..|..+|++++|+|+++ +++++.||.|++|
T Consensus 224 ~~~~i~~~~~~~~~~----------l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw 292 (313)
T 3odt_A 224 HESFVYCIKLLPNGD----------IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIF 292 (313)
T ss_dssp CSSCEEEEEECTTSC----------EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEE
T ss_pred CCceEEEEEEecCCC----------EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEE
Confidence 999999999999873 78999999999999999999999999999999999999998 5679999999999
Q ss_pred eCCCCeeEEEEe
Q 010794 457 SLKEGKIVKTYT 468 (501)
Q Consensus 457 ~~~~~~~~~~~~ 468 (501)
++.+++.+....
T Consensus 293 ~~~~~~~~~~~~ 304 (313)
T 3odt_A 293 SQEKSRWASEDE 304 (313)
T ss_dssp ESCGGGCCC---
T ss_pred eCCCCceeehhh
Confidence 999887655443
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-40 Score=313.43 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=208.8
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC--
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 223 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~-- 223 (501)
+.++.+|...|++++|+|+|++||||+.|++|+||++...... .+. ...+|..+|.+++|+++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~-----------~~~----~l~gH~~~V~~v~~s~~~~ 66 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK-----------LID----TLTGHEGPVWRVDWAHPKF 66 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC-----------CCE----EECCCSSCEEEEEECCGGG
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE-----------EEE----EEccccCCeEEEEecCCCc
Confidence 3568899999999999999999999999999999998643110 011 22356788999999874
Q ss_pred CCEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 224 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
+++|++|+.|++|+||+.... ....+.+|..+|.+++|+|+ +.+|++|+.|++|++||+++....
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~---------- 136 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT---------- 136 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB----------
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce----------
Confidence 899999999999999998653 44567889999999999997 889999999999999998764210
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC-------------CCEEEEEeCCCeEEEEeC
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-------------GSLLASCSDDVTAKIWNM 365 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-------------~~~l~s~s~Dg~i~iwd~ 365 (501)
....+.+|...|.+++|+|+ +++|++|+.|++|+|||+
T Consensus 137 -----------------------------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~ 187 (297)
T 2pm7_B 137 -----------------------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (297)
T ss_dssp -----------------------------CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEE
T ss_pred -----------------------------eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEE
Confidence 01234578888888888886 579999999999999999
Q ss_pred CCCc----eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---EEEEe--eCCCCCeEEEE
Q 010794 366 KQDK----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK---LLYSL--NGHREPVYSLA 436 (501)
Q Consensus 366 ~~~~----~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---~~~~~--~~h~~~v~~l~ 436 (501)
+++. ....+.+|...|.+++|+|++. ...+|++|+.|++|+|||++... ....+ .+|...|++++
T Consensus 188 ~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~------~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~ 261 (297)
T 2pm7_B 188 NSDAQTYVLESTLEGHSDWVRDVAWSPTVL------LRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS 261 (297)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCS------SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEE
T ss_pred cCCCceEEEEEEecCCCCceEEEEECCCCC------CceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEE
Confidence 8765 5667889999999999999851 01389999999999999987642 22233 56788999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCC
Q 010794 437 FSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 437 ~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
|+|+|++||+|+.||+|+||+..
T Consensus 262 ~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 262 WSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ECSSSCCEEEEETTSCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999999999999999999976
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.5e-39 Score=309.36 Aligned_cols=282 Identities=25% Similarity=0.419 Sum_probs=245.4
Q ss_pred cccCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCc------eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEE
Q 010794 208 TNEKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNGD------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 280 (501)
Q Consensus 208 ~~~~~~~V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~------~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iw 280 (501)
..+|.+.|++++|+|+ +++|+||+.|++|+||++... ....+.+|..+|.+++|+|++.+|++|+.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 4567889999999997 689999999999999997532 345678999999999999999999999999999999
Q ss_pred eCCCcceeEeeeeccCCeEEEecC-CCceEEEecCCCeEEEEEcCCCcc-eeeecCCCCceeEEEEcCCC--CEEEEEeC
Q 010794 281 DVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTG--SLLASCSD 356 (501)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~h~~~v~~v~~~~~~--~~l~s~s~ 356 (501)
+............+...+....+. ....+++++.|+.+++|+...... ...+.+|...+.+++|++++ .++++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC
Confidence 999888777777777777666664 456788999999999999876543 34456899999999999875 57899999
Q ss_pred CCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEE
Q 010794 357 DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA 436 (501)
Q Consensus 357 Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 436 (501)
|+.|++||+.+++.+..+.+|...|++++|+|++. +|++|+.||.|++||+++.+.+..+..+ ..|.+++
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~---------~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 263 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS---------LCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC 263 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS---------EEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC---------EEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence 99999999999999999999999999999999986 8999999999999999999999988855 6899999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec----------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 437 FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG----------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 437 ~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~----------~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|+|++.++ +++.|+.|++||++++..+..+.. ...|++++|+|+|++||+|+.||.|+|||++
T Consensus 264 ~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 264 FSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp ECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 99988655 556799999999999887766532 3469999999999999999999999999986
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.1e-41 Score=335.55 Aligned_cols=287 Identities=18% Similarity=0.293 Sum_probs=231.7
Q ss_pred EEccCCccceeEEEECCC-CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-CC
Q 010794 147 TILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EG 224 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~-~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-~~ 224 (501)
..+.+|...|+||+|||. +++||+|+.||.|+|||+.++... ... ...+|...|++|+|+| ++
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-----------~~~----~~~gH~~~V~~l~f~p~~~ 177 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-----------TFI----KGIGAGGSITGLKFNPLNT 177 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-----------EEE----CCCSSSCCCCEEEECSSCT
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-----------eEE----EccCCCCCEEEEEEeCCCC
Confidence 456689999999999994 679999999999999998765321 011 1235678899999998 78
Q ss_pred CEEEEEeCCCeEEEEECCCceeEeecC---CCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEE
Q 010794 225 TLLATGSYDGQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 301 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~~~~~~~~---h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (501)
.+|++|+.||+|+|||+.+.....+.. +...+.+++|+|++.+|++|+.||+|++||++...
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~--------------- 242 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE--------------- 242 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---------------
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---------------
Confidence 999999999999999998765544432 34467899999999999999999999999985421
Q ss_pred ecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeee---cccC
Q 010794 302 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHD---LREH 377 (501)
Q Consensus 302 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~---~~~~ 377 (501)
+..+.+|...|.+++|+|++. +|++|+.|++|+|||+++.+.... ...|
T Consensus 243 ---------------------------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h 295 (435)
T 4e54_B 243 ---------------------------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH 295 (435)
T ss_dssp ---------------------------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC
T ss_pred ---------------------------eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeec
Confidence 234668999999999999986 788999999999999987665433 3568
Q ss_pred CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC------CeEEEEECCCCCEEEEEeC--
Q 010794 378 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE------PVYSLAFSPTGEYLASGSL-- 449 (501)
Q Consensus 378 ~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~------~v~~l~~spdg~~lasgs~-- 449 (501)
...|++++|+|++. +|++|+.||.|+|||+.++.....+..|.. .+..+.|+|++.++++++.
T Consensus 296 ~~~v~~~~~spdg~---------~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 366 (435)
T 4e54_B 296 RHPVNAACFSPDGA---------RLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPD 366 (435)
T ss_dssp SSCEEECCBCTTSS---------EEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCC
T ss_pred cccccceeECCCCC---------eeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCC
Confidence 89999999999986 899999999999999999888777766542 2345678888777776642
Q ss_pred ----------CCcEEEEeCCCCeeEEEEec--CCCEEEE-EECCCCCEEEEEECCCeEEEEEee
Q 010794 450 ----------DKSMHIWSLKEGKIVKTYTG--NGGIFEV-CWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 450 ----------Dg~i~iw~~~~~~~~~~~~~--~~~i~~~-~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++.|++|+..+|+++..+.. ...|.++ +|+|+|++||+|+ |++|+|||++
T Consensus 367 ~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 367 PNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp TTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred CCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence 35799999999998877643 3457776 6999999999876 7899999975
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.6e-40 Score=322.76 Aligned_cols=281 Identities=18% Similarity=0.306 Sum_probs=253.1
Q ss_pred cccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCc-------eeEeecCCCCCEEEEEecCC----C---CEEEEEec
Q 010794 208 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-------LKCTLSKHKGPIFSLKWNKK----G---DYLLTGSC 273 (501)
Q Consensus 208 ~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~-------~~~~~~~h~~~V~~l~~~~~----~---~~l~s~s~ 273 (501)
..+|...|++++|+| .+|++|+.||.|+||+.... ....+.+|..+|++++|+|+ + .+|++++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 345788999999999 89999999999999998754 36778899999999999999 9 99999999
Q ss_pred CCeEEEEeCCCcce-----eEeeeec-----cCCeEEEecC----C-Cce-EEEecCCCeEEEEEcCC------Cccee-
Q 010794 274 DKTAIVWDVKTEEW-----KQQFEFH-----SGPTLDVDWR----N-NVS-FATSSTDNMIYVCKIGE------NRPIK- 330 (501)
Q Consensus 274 D~~i~iwd~~~~~~-----~~~~~~~-----~~~~~~~~~~----~-~~~-~~~~~~d~~i~~~~~~~------~~~~~- 330 (501)
|++|++||+.++.. ...+..| ...+.++.|. + ... +++++.|+.|++|++.. ...+.
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 99999999998886 7777777 5889999987 4 445 88899999999999988 66665
Q ss_pred ----ee-------cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeccc---C---CCCEEEEEEcCCCCCC
Q 010794 331 ----TF-------AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---H---SKEIYTIRWSPTGSGT 393 (501)
Q Consensus 331 ----~~-------~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---~---~~~v~~i~~~p~g~~~ 393 (501)
.+ ..|...|.+++|+|++ +|++++.||.|++||+++++.+..+.. | ...+.+++|+|++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-- 246 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-- 246 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT--
T ss_pred cCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC--
Confidence 66 4488899999999999 999999999999999999999988888 8 99999999999886
Q ss_pred CCCCCcEEEEEEeCC---CeEEEEeCCCCeEEEEeeC-------------CCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 010794 394 NNPNQQLILASASFD---STVKLWDVELGKLLYSLNG-------------HREPVYSLAFSPTGEYLASGSLDKSMHIWS 457 (501)
Q Consensus 394 ~~~~~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~-------------h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 457 (501)
+|++++.| |.|++||+++++.+..+.+ |...|++++|+|++++|++|+.||.|++|+
T Consensus 247 -------~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 247 -------LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp -------EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred -------EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 78999999 9999999999999999998 999999999999999999999999999999
Q ss_pred CCCCeeEEEEe------c----------------CCCEEEEEECCCC----------CEEEEEECCCeEEEEEee
Q 010794 458 LKEGKIVKTYT------G----------------NGGIFEVCWNKEG----------DKIAACFANHTVCVLDFR 500 (501)
Q Consensus 458 ~~~~~~~~~~~------~----------------~~~i~~~~ws~~g----------~~la~~~~d~~v~v~~~~ 500 (501)
+.+++.+..+. . ...|.+++|+|+| ++|++|+.||.|+||+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 99999998887 4 4569999999999 799999999999999986
No 49
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=320.95 Aligned_cols=293 Identities=19% Similarity=0.335 Sum_probs=241.9
Q ss_pred eEEccCCccceeEEEECCCCCE-EEEEEC---CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEEC
Q 010794 146 VTILEGHTSEVCACAWSPAGSL-LASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 221 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~-l~sgs~---D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s 221 (501)
..++.+|...|++++|+|++.. +++|+. |+.|++|++.++... .... ..|...|++++|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~-----------~~~~-----~~~~~~v~~~~~~ 74 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK-----------LLRE-----IEKAKPIKCGTFG 74 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE-----------EEEE-----EEESSCEEEEECT
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc-----------ceee-----ecccCcEEEEEEc
Confidence 3567889999999999999865 456665 999999999865311 1111 1346789999999
Q ss_pred CC---CCEEEEEeCCCeEEEEECCCc--eeEeecCCCCCEEEEE------ecCCCCEEEEEecCCeEEEEeCCCcc-eeE
Q 010794 222 GE---GTLLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLK------WNKKGDYLLTGSCDKTAIVWDVKTEE-WKQ 289 (501)
Q Consensus 222 ~~---~~~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l~------~~~~~~~l~s~s~D~~i~iwd~~~~~-~~~ 289 (501)
|+ +.+|++|+.||.|++|+.... ....+.+|...|.++. |+|++++|++|+.|++|++||++++. ...
T Consensus 75 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 75 ATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp TCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred CCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 98 799999999999999998743 5678889999999995 57899999999999999999999876 666
Q ss_pred eeeeccC----CeEEEe----c-CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC---CCCEEEEEeCC
Q 010794 290 QFEFHSG----PTLDVD----W-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP---TGSLLASCSDD 357 (501)
Q Consensus 290 ~~~~~~~----~~~~~~----~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~s~D 357 (501)
.+..+.+ .+.++. | .+...+++++.|+.|++|++.....+. ...|...|.+++|+| ++.+|++|+.|
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 6665554 677776 4 355678889999999999998887643 466889999999999 99999999999
Q ss_pred CeEEEEeCCCCceeeecc-----cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-------------
Q 010794 358 VTAKIWNMKQDKYVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------------- 419 (501)
Q Consensus 358 g~i~iwd~~~~~~~~~~~-----~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------------- 419 (501)
|.|++||++++..+..+. .|...|++++|+|++. .+|++|+.||.|++||++.+
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~ 305 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR--------ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM 305 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE--------EEEEEEETTSEEEEEEEECCSCC--CCTTSCCC
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC--------cEEEEEeCCCcEEEeecCCCcccccccCCCCcc
Confidence 999999998877665554 8999999999999874 37999999999999998753
Q ss_pred ------eEEEEeeCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCee
Q 010794 420 ------KLLYSLNGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKI 463 (501)
Q Consensus 420 ------~~~~~~~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~ 463 (501)
+.+..+.+|..+|++++|+|++++|+ +|+.||.|++|++.+.++
T Consensus 306 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 306 GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46778899999999999999999998 899999999999987653
No 50
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=318.29 Aligned_cols=342 Identities=17% Similarity=0.227 Sum_probs=243.7
Q ss_pred ceEEccCCccceeEEEECC-CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-
Q 010794 145 DVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 222 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp-~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~- 222 (501)
....+.+|.+.|++++|+| ++++|++|+.||.|++|++.++......... ............|...|.+++|+|
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCK----AVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEEC----EEEEECTTCTTCCSSCEEEEEECTT
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecc----ccccccccccccCCCcEEEEEEccC
Confidence 3467889999999999999 9999999999999999999876543221100 000111122345778999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCC---CEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 223 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG---DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 223 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
++.+|++|+.||.|++|+...........+...+.++.|+|.+ .+|++|+.|+.|++||++++.....+..|..++.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 7889999999999999998866554444588899999999854 4999999999999999999999999999999999
Q ss_pred EEecCCCc--eEEEecCCCeEEEEEcCCCc-ceeee---------------cCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q 010794 300 DVDWRNNV--SFATSSTDNMIYVCKIGENR-PIKTF---------------AGHQGEVNCVKWDPTGSLLASCSDDVTAK 361 (501)
Q Consensus 300 ~~~~~~~~--~~~~~~~d~~i~~~~~~~~~-~~~~~---------------~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~ 361 (501)
++.|.+.. .+++++.|+.|++|++.... ++..+ .+|...|.+++|+|++++|++++.||.|+
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 270 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEE
Confidence 99997654 58899999999999997654 33333 57889999999999999999999999999
Q ss_pred EEeCCCCceeeecccCCC----CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEE
Q 010794 362 IWNMKQDKYVHDLREHSK----EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF 437 (501)
Q Consensus 362 iwd~~~~~~~~~~~~~~~----~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 437 (501)
+||+.+++....+..+.. ....+.+..... ..+++++.++.|++||+.+++.+..+.+|...|++++|
T Consensus 271 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCS--------SEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSS--------SCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEECCCCccceeccccccccccccceeEEecCCC--------ceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 999998776544332211 001111111111 13566778999999999999999999999999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC-CCEEEEEECCCeEEEEEee
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE-GDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~-g~~la~~~~d~~v~v~~~~ 500 (501)
+|++++|++|+.||.|++|++.+++.+....... ....+++. ...++++..++.+.+|+..
T Consensus 343 s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 343 QSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT--TKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp ETTTTEEEEEETTSCEEEEEECC-----------------------------------------
T ss_pred cCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE--eccccccccceeecccCccCceeecCCc
Confidence 9999999999999999999999988766543322 12334443 3355566778999999764
No 51
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-39 Score=309.81 Aligned_cols=248 Identities=19% Similarity=0.328 Sum_probs=224.5
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEEecCCCeEEEEEc
Q 010794 245 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKI 323 (501)
Q Consensus 245 ~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~ 323 (501)
...++.+|.+.|++++|+|++.+|++|+.||+|++||+.++.....+..|..++.++.|.+ ...+++++.|+.|++|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 4567889999999999999999999999999999999999999999999999999998864 567889999999999999
Q ss_pred CCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEE
Q 010794 324 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 402 (501)
Q Consensus 324 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l 402 (501)
.++..+..+.+|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.+++|+|.+. .+|
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~--------~~l 156 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP--------STF 156 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCT--------TEE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCC--------CEE
Confidence 999999999999999999999999999999999999999999877 44567889999999999999532 279
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEee-CCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEE
Q 010794 403 ASASFDSTVKLWDVELGKLLYSLN-GHREPVYSLAFSP--TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCW 478 (501)
Q Consensus 403 ~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~sp--dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~w 478 (501)
++|+.|++|++||++.+.....+. +|...|..++|+| ++++|++|+.|++|++||+++++.+.++.++ ..|..++|
T Consensus 157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (304)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEE
Confidence 999999999999998877666654 5668899999987 7789999999999999999999999998875 46999999
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010794 479 NKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 479 s~~g~~la~~~~d~~v~v~~~~ 500 (501)
+|++.+||+|+.|++|+|||++
T Consensus 237 ~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 237 HPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEETT
T ss_pred CCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999999999974
No 52
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.5e-39 Score=312.95 Aligned_cols=244 Identities=23% Similarity=0.489 Sum_probs=220.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCccee
Q 010794 210 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 288 (501)
Q Consensus 210 ~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 288 (501)
+|...|++++|+|++++|++|+.||.|+||+.. +.....+..|...|.+++|+|++++|++|+.|+.|++||+.+....
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 457889999999999999999999999999975 4556678899999999999999999999999999999998764310
Q ss_pred EeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 010794 289 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 368 (501)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~ 368 (501)
......+.+|.+.|.++.|++++. +++++.|++|++||+.++
T Consensus 133 -------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~ 174 (340)
T 1got_B 133 -------------------------------------VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG 174 (340)
T ss_dssp -------------------------------------CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT
T ss_pred -------------------------------------ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC
Confidence 012345678999999999998875 889999999999999999
Q ss_pred ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEe
Q 010794 369 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 369 ~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs 448 (501)
..+..+.+|...|.+++|+|++. +|++|+.|+.|++||++++.++..+.+|...|++++|+|++++|++|+
T Consensus 175 ~~~~~~~~h~~~v~~~~~~~~~~---------~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 175 QQTTTFTGHTGDVMSLSLAPDTR---------LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEcCCCCceEEEEECCCCC---------EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 99999999999999999999886 899999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 449 LDKSMHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 449 ~Dg~i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.||+|++||+++++.+..+... ..|.+++|+|+|++|++|+.|+.|+|||++
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 9999999999999888777543 369999999999999999999999999974
No 53
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=329.27 Aligned_cols=298 Identities=14% Similarity=0.278 Sum_probs=233.3
Q ss_pred CCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCC------------CCeEEE
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKS------------KDVTTL 218 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~V~~~ 218 (501)
.|.+.|++++|+|+|.+||+|+.||.|+||++.++........... .....+. +|. ..|+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~--~~~~~~~----~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEY--NVYSTFQ----SHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCE--EEEEEEE----CCCCEEEGGGTEEECCCCCEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccce--eEecccc----cccccccccccccccCceEEE
Confidence 3788999999999999999999999999999987643221111111 1122222 234 779999
Q ss_pred EECCCC--CEEEEEeCCCeEEEEECCCcee-----------------------------------------EeecCCCCC
Q 010794 219 DWNGEG--TLLATGSYDGQARIWSTNGDLK-----------------------------------------CTLSKHKGP 255 (501)
Q Consensus 219 ~~s~~~--~~l~sg~~dg~i~iw~~~~~~~-----------------------------------------~~~~~h~~~ 255 (501)
+|+|++ .+|++|+.|+.|++|+...... ....+|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 999998 8999999999999999753211 113679999
Q ss_pred EEEEEecCCCCEEEEEecCCeEEEEeCCCcc-eeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC
Q 010794 256 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 334 (501)
Q Consensus 256 V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 334 (501)
|++++|+|++++|++| .|++|++||+++.. .... +++. ...+.+
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~------------------------------~~~~----~~~~~~ 224 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITDRSFNI------------------------------VDIK----PANMEE 224 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEE------------------------------EECC----CSSGGG
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeee------------------------------eecc----cccccc
Confidence 9999999999999999 79999999997432 1111 1111 124568
Q ss_pred CCCceeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCce----eeecccCCC------------CEEEEEEcCCCCCCCCCC
Q 010794 335 HQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKY----VHDLREHSK------------EIYTIRWSPTGSGTNNPN 397 (501)
Q Consensus 335 h~~~v~~v~~~~~~-~~l~s~s~Dg~i~iwd~~~~~~----~~~~~~~~~------------~v~~i~~~p~g~~~~~~~ 397 (501)
|...|.+++|+|++ .+|++|+.||.|++||++++.. +..+..|.. .|.+++|+|++.
T Consensus 225 ~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~------ 298 (447)
T 3dw8_B 225 LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR------ 298 (447)
T ss_dssp CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS------
T ss_pred cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC------
Confidence 99999999999998 9999999999999999998876 677777765 899999999986
Q ss_pred CcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCC---------------eEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 398 QQLILASASFDSTVKLWDVEL-GKLLYSLNGHREP---------------VYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 398 ~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~---------------v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
+|++++. +.|++||+++ ++++..+.+|... +..++|+|++++|++|+.||.|++||+.++
T Consensus 299 ---~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 299 ---YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp ---EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ---EEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 7888888 9999999997 8888888888542 334999999999999999999999999998
Q ss_pred eeEEEE---------------------------------ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 462 KIVKTY---------------------------------TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 462 ~~~~~~---------------------------------~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+.+... .....|..++|+|+|++||+++.++ +++|.-+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 375 RDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 765421 1123578899999999999998876 8888654
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-38 Score=305.88 Aligned_cols=286 Identities=17% Similarity=0.329 Sum_probs=249.6
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
...+|...|++++|+|++++|++++ ||.|++|++.++...... . .. ....+...|.+++|+|++++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~-------~---~~--~~~~~~~~v~~~~~~~~~~~l 112 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV-------S---QL--DCLNRDNYIRSCKLLPDGCTL 112 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS-------E---EE--ECSCTTSBEEEEEECTTSSEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeee-------e---cc--cccCCCCcEEEEEEcCCCCEE
Confidence 3457999999999999999999999 999999999765422110 0 00 112356789999999999999
Q ss_pred EEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 228 ATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
++|+.|+.|++|+.... ....+..|...|++++|+|++++|++++.|+.|++||+++++....+..|...+.++.|.
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 99999999999998754 345678899999999999999999999999999999999999988998899999999997
Q ss_pred C-CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEE
Q 010794 305 N-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 383 (501)
Q Consensus 305 ~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~ 383 (501)
+ ...+++++.|+.|++|++...+.+..+. |...+.+++|+|++++|++++.|+.|++||+.+.... .+..|...+.+
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~ 270 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLS 270 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEE
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeE
Confidence 5 4578889999999999999888777664 7788999999999999999999999999999887654 56788999999
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010794 384 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 458 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 458 (501)
++|+|++. +|++++.||.|++||+.+++.+.... |...|++++|+|++++|++++.||.|++|++
T Consensus 271 ~~~~~~~~---------~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 271 LKFAYCGK---------WFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEECCCCC---------EEEEecCCCcEEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 99999986 78999999999999999998886554 7889999999999999999999999999986
No 55
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-39 Score=323.91 Aligned_cols=248 Identities=27% Similarity=0.465 Sum_probs=232.7
Q ss_pred ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEEecCCCeEEEEE
Q 010794 244 DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCK 322 (501)
Q Consensus 244 ~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~ 322 (501)
.....+.+|.++|++++|+|++.+|++|+.|++|++||+.+++....+..|...+.++.|.+ ...+++++.|+.|++|+
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 33456789999999999999999999999999999999999999999999999999999965 45788999999999999
Q ss_pred cCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEE
Q 010794 323 IGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 402 (501)
Q Consensus 323 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l 402 (501)
+....++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.++..+.+|...+.++.|+|++. +|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~---------~l 249 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT---------LI 249 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS---------EE
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC---------EE
Confidence 999999999999999999999999999999999999999999999999999999999999999999986 89
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCC--------------------CCEEEEEeCCCcEEEEeCCCCe
Q 010794 403 ASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT--------------------GEYLASGSLDKSMHIWSLKEGK 462 (501)
Q Consensus 403 ~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd--------------------g~~lasgs~Dg~i~iw~~~~~~ 462 (501)
++|+.|+.|++||+.++++...+.+|...|++++|+|+ |.+|++|+.|++|++||+.+++
T Consensus 250 ~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 250 ASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred EEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999999999999999999999996 6789999999999999999999
Q ss_pred eEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 463 IVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 463 ~~~~~~~~~-~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+.++.++. .|.+++|+|+|++|++|+.|++|+|||++
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 998887654 59999999999999999999999999974
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-41 Score=331.34 Aligned_cols=288 Identities=16% Similarity=0.188 Sum_probs=226.8
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
.+..|..+|++++|+|++++||+|+.|+.|+||++.++.. ........|...|++++|+|++++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~---------------~~~~~~~~h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW---------------KHARTFSDHDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE---------------EECCCBCCCSSCEEEEEECTTTCCE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce---------------EEEEEEecCCceEEEEEEeCCCCEE
Confidence 3445778999999999999999999999999999875410 1112233467889999999999999
Q ss_pred EEEeCCCeEEEEECCCce----eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec
Q 010794 228 ATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~~~~----~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (501)
++|+.|+.|++|+..... ...+.+|...|++++|+|++++|++|+.|++|++||++++...
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--------------- 135 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDW--------------- 135 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----C---------------
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccc---------------
Confidence 999999999999987543 5667889999999999999999999999999999998765310
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecC-CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCC----------------
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK---------------- 366 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~---------------- 366 (501)
..+..+.+ |...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 136 -----------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 192 (377)
T 3dwl_C 136 -----------------------WVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSR 192 (377)
T ss_dssp -----------------------CCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSC
T ss_pred -----------------------eeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccc
Confidence 11234455 88999999999999999999999999999985
Q ss_pred --CCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE----EEEeeCCCCCeEEEEECCC
Q 010794 367 --QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL----LYSLNGHREPVYSLAFSPT 440 (501)
Q Consensus 367 --~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd 440 (501)
.+.++..+ .|...|.+++|+|++. +|++|+.||.|++||+.+++. +..+.+|..+|++++|+|+
T Consensus 193 ~~~~~~~~~~-~~~~~v~~~~~sp~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (377)
T 3dwl_C 193 LPFNTVCAEY-PSGGWVHAVGFSPSGN---------ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANE 262 (377)
T ss_dssp CCEEEEEECC-CCSSSEEEEEECTTSS---------CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEET
T ss_pred cchhhhhhcc-cCCceEEEEEECCCCC---------EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCC
Confidence 34556666 8999999999999986 789999999999999998876 7788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCe--eE----------------------------------EEEe----------------
Q 010794 441 GEYLASGSLDKSMHIWSLKEGK--IV----------------------------------KTYT---------------- 468 (501)
Q Consensus 441 g~~lasgs~Dg~i~iw~~~~~~--~~----------------------------------~~~~---------------- 468 (501)
+++|++|+.++.+ +|+...+. .. ..+.
T Consensus 263 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 341 (377)
T 3dwl_C 263 SAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPT 341 (377)
T ss_dssp TEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSS
T ss_pred CCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCc
Confidence 9999999877766 66554211 00 0000
Q ss_pred -cCCCEEEEEECCCC-C---EEEEEECCCeEEEEEe
Q 010794 469 -GNGGIFEVCWNKEG-D---KIAACFANHTVCVLDF 499 (501)
Q Consensus 469 -~~~~i~~~~ws~~g-~---~la~~~~d~~v~v~~~ 499 (501)
+...|.++++.+.. . .|++|+.||.|+|||+
T Consensus 342 ~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 342 VHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 33468899876643 3 6999999999999986
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-39 Score=306.19 Aligned_cols=252 Identities=24% Similarity=0.436 Sum_probs=207.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---ceeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCCC
Q 010794 210 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKT 284 (501)
Q Consensus 210 ~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~ 284 (501)
+|...|++++|+|+|++|++|+.|++|+||+..+ .....+.+|.++|++++|+|. +++|++|+.|++|++||+.+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 4678899999999999999999999999999863 456788999999999999863 89999999999999999876
Q ss_pred cceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC--CCEEEEEeCCCeEEE
Q 010794 285 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKI 362 (501)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~i~i 362 (501)
+.+ ..+..+.+|...|.+++|+|+ +.+|++|+.|++|++
T Consensus 87 ~~~---------------------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 87 GRW---------------------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp SCB---------------------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred Cce---------------------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 531 112345678899999999998 899999999999999
Q ss_pred EeCCCCce--eeecccCCCCEEEEEEcCCCCCCC----CCCCcEEEEEEeCCCeEEEEeCCCCe----EEEEeeCCCCCe
Q 010794 363 WNMKQDKY--VHDLREHSKEIYTIRWSPTGSGTN----NPNQQLILASASFDSTVKLWDVELGK----LLYSLNGHREPV 432 (501)
Q Consensus 363 wd~~~~~~--~~~~~~~~~~v~~i~~~p~g~~~~----~~~~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h~~~v 432 (501)
||+++... ...+..|...|.+++|+|++.... .+....+|++|+.|++|++||++++. ....+.+|...|
T Consensus 128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence 99987632 345678999999999999742100 00012378999999999999998765 667889999999
Q ss_pred EEEEECCCC---CEEEEEeCCCcEEEEeCCCCe--e-EEEE---ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 433 YSLAFSPTG---EYLASGSLDKSMHIWSLKEGK--I-VKTY---TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 433 ~~l~~spdg---~~lasgs~Dg~i~iw~~~~~~--~-~~~~---~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++|+|+|++ .+||+||.|++|+||++.++. . ...+ .....+++++|+|+|++||+++.|++|+||+..
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 999999995 899999999999999987642 1 1222 124569999999999999999999999999875
No 58
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-39 Score=316.53 Aligned_cols=252 Identities=21% Similarity=0.285 Sum_probs=206.9
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
...+|...|++++|+|++. +++++.||+|+|||+.++..... ......+|...|++++|+|++++|
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~-------------~~~~~~~h~~~V~~v~~spdg~~l 154 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLV-------------NKFAKYEHDDIVKTLSVFSDGTQA 154 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CC-------------CCEEECCCSSCEEEEEECSSSSEE
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEE-------------EeeccCCCCCCEEEEEECCCCCEE
Confidence 4457999999999999986 45688999999999977643211 011123467889999999999999
Q ss_pred EEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC
Q 010794 228 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 305 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (501)
++|+.|+.|+|||... .....+.+|...|++++|+|++. +|++++.|++|++||+++++....+
T Consensus 155 ~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~-------------- 220 (357)
T 4g56_B 155 VSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI-------------- 220 (357)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC--------------
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee--------------
Confidence 9999999999999864 55668899999999999999875 7899999999999999876532211
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEE
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 384 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i 384 (501)
.+..|...+.+++|+|++ .+|++|+.|+.|++||+++++.+..+..|...|+++
T Consensus 221 -------------------------~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 221 -------------------------DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp -------------------------CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred -------------------------eeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 223466779999999984 689999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC
Q 010794 385 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~ 461 (501)
+|+|++. .+|++|+.|++|+|||+++++++..+ +|...|++|+||| ++.+|||||.||+|++|++.+.
T Consensus 276 ~~sp~~~--------~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 276 AYSYHSS--------PFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECSSSS--------CCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEcCCCC--------CEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999874 27899999999999999999887655 7999999999999 7999999999999999999753
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=312.45 Aligned_cols=256 Identities=29% Similarity=0.519 Sum_probs=207.2
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
...+|...|++++|+|+|++|++|+.|++|+||++..+. ......+ .+|...|.+++|+|++++|
T Consensus 56 ~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----------~~~~~~~----~~h~~~v~~v~~sp~~~~l 120 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-----------FECVTTL----EGHENEVKSVAWAPSGNLL 120 (345)
T ss_dssp ECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------------EEEEEEE----CCCSSCEEEEEECTTSSEE
T ss_pred eccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-----------eEEEEEc----cCCCCCceEEEEeCCCCEE
Confidence 347899999999999999999999999999999986532 1112222 3467889999999999999
Q ss_pred EEEeCCCeEEEEECCCc----eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec
Q 010794 228 ATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~~~----~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (501)
++|+.|+.|++|++... ....+.+|...|.+++|+|++.+|++|+.|++|++||++++.+.
T Consensus 121 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~--------------- 185 (345)
T 3fm0_A 121 ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV--------------- 185 (345)
T ss_dssp EEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE---------------
T ss_pred EEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE---------------
Confidence 99999999999997643 34567889999999999999999999999999999998665321
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC---------------
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--------------- 368 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~--------------- 368 (501)
++..+.+|...|.+++|+|++++|++|+.|++|+||+....
T Consensus 186 ------------------------~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 186 ------------------------CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp ------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred ------------------------EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 12356789999999999999999999999999999996321
Q ss_pred ceeeeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---------EEEEeeCCCCCeEEEEEC
Q 010794 369 KYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK---------LLYSLNGHREPVYSLAFS 438 (501)
Q Consensus 369 ~~~~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~s 438 (501)
+++..+.. |...|++++|+|++. .|++++.|+.|++|+...+. ......+|...|++|+|+
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~---------~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTG---------ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTC---------CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred ceeEEecCCCCCcEEEEEEecCCC---------EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 22333333 788999999999886 68999999999999976542 122346899999999999
Q ss_pred CCC-CEEEEEeCCCcEEEEeCCCCeeEEE
Q 010794 439 PTG-EYLASGSLDKSMHIWSLKEGKIVKT 466 (501)
Q Consensus 439 pdg-~~lasgs~Dg~i~iw~~~~~~~~~~ 466 (501)
|++ .+||+||.||+|++|++.+++.+..
T Consensus 313 p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 313 PKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp SSSTTEEEEEETTSCEEEEEECC------
T ss_pred CCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 998 5999999999999999998776543
No 60
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-38 Score=304.35 Aligned_cols=248 Identities=26% Similarity=0.400 Sum_probs=216.8
Q ss_pred ccccCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCC------ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEE
Q 010794 207 RTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNG------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 279 (501)
Q Consensus 207 ~~~~~~~~V~~~~~s~~~-~~l~sg~~dg~i~iw~~~~------~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~i 279 (501)
...+|...|++++|+|++ ++|++|+.|++|++|+... .....+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 345678899999999965 8999999999999999753 234578899999999999999999999999999999
Q ss_pred EeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCe
Q 010794 280 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 359 (501)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~ 359 (501)
||+.+++. +..+.+|...|.+++|+|++.+|++|+.|++
T Consensus 92 wd~~~~~~-----------------------------------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 92 WDVATGET-----------------------------------------YQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EETTTTEE-----------------------------------------EEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EECCCCCe-----------------------------------------eEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 99987643 2345678999999999999999999999999
Q ss_pred EEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECC
Q 010794 360 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 439 (501)
Q Consensus 360 i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 439 (501)
|++||++ +..+..+.+|...+.+++|.|..... ....+|++|+.|+.|++||+++++....+.+|..+|++++|+|
T Consensus 131 i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~---~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 131 IKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD---DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP 206 (319)
T ss_dssp EEEEETT-SCEEEEECCCSSCEEEEEECCC---------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT
T ss_pred EEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC---CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC
Confidence 9999986 45677788999999999999865321 1123789999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 440 TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 440 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+|++|++|+.||+|++||+.+++.+.++..+..+.+++|+|+|.+||++..+ .+.||++.
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLD 266 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeC
Confidence 9999999999999999999999999999888889999999999999988865 58999864
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-38 Score=315.92 Aligned_cols=288 Identities=20% Similarity=0.373 Sum_probs=239.9
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
+....+|...+.+.++++++..+++++.|+.|++|++.++... .... ..+...|++++|+|++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~-------------~~~~---~~~~~~v~~v~~s~~~~ 147 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVS-------------ALAE---TDESTYVASVKWSHDGS 147 (401)
T ss_dssp EEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEE-------------EEEE---CCTTCCEEEEEECTTSS
T ss_pred eeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEe-------------Eeee---cCCCCCEEEEEECCCCC
Confidence 3344578776554334434466889999999999999876421 1111 12567899999999999
Q ss_pred EEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 226 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
+|++|+.||.|++|+.. +.....+.+|...|.+++|+ +++|++|+.|++|++||++...
T Consensus 148 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~------------------ 207 (401)
T 4aez_A 148 FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN------------------ 207 (401)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS------------------
T ss_pred EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc------------------
Confidence 99999999999999986 45667788999999999994 5799999999999999987432
Q ss_pred CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEE
Q 010794 305 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 384 (501)
Q Consensus 305 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i 384 (501)
..+..+.+|.+.|.+++|+|++++|++|+.||.|++||++++..+..+..|...|.++
T Consensus 208 ----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~ 265 (401)
T 4aez_A 208 ----------------------HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAV 265 (401)
T ss_dssp ----------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEE
T ss_pred ----------------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEE
Confidence 1234566789999999999999999999999999999999999998899999999999
Q ss_pred EEcCCCCCCCCCCCcEEEEEEe--CCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCC
Q 010794 385 RWSPTGSGTNNPNQQLILASAS--FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS--LDKSMHIWSLKE 460 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs--~Dg~i~iw~~~~ 460 (501)
+|+|++. .++++|+ .|+.|++||+.+++.+..+. +...|++++|+|++++|++++ .||.|++|++.+
T Consensus 266 ~~~p~~~--------~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 266 AWCPWQS--------NLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EECTTST--------TEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EECCCCC--------CEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 9999875 2677765 79999999999999998887 567899999999999999954 899999999999
Q ss_pred CeeEEE--Eec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 461 GKIVKT--YTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 461 ~~~~~~--~~~-~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++.... +.+ ...|.+++|+|+|++|++++.||.|+||++.
T Consensus 337 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 337 SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 776554 333 4569999999999999999999999999975
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-38 Score=300.11 Aligned_cols=274 Identities=23% Similarity=0.323 Sum_probs=244.4
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc--
Q 010794 209 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-- 285 (501)
Q Consensus 209 ~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~-- 285 (501)
.+|...|++++| +++.+|++|+.||.|++|+.... ....+..|...|.+++|+|++.+|++|+.|+.|++|++...
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 456789999999 99999999999999999998654 45677889999999999999999999999999999998654
Q ss_pred -ceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEE
Q 010794 286 -EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIW 363 (501)
Q Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iw 363 (501)
.....+..|..++.++.| +...+++++.|+.|++|+ ....+..+.+|...+.+++|+| ++.+|++++.||.|++|
T Consensus 94 ~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 456677788899999999 566889999999999999 6677888889999999999998 89999999999999999
Q ss_pred eCCCCceeeeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCC
Q 010794 364 NMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE 442 (501)
Q Consensus 364 d~~~~~~~~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~ 442 (501)
| ....+..+.. |...+.+++|+|++ .+++++.||.|++||+++++.+..+.+|..+|++++|+|++
T Consensus 171 d--~~~~~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 171 Q--NDKVIKTFSGIHNDVVRHLAVVDDG----------HFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp E--TTEEEEEECSSCSSCEEEEEEEETT----------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-
T ss_pred e--cCceEEEEeccCcccEEEEEEcCCC----------eEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-
Confidence 9 4455666666 88999999999987 38899999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 443 YLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 443 ~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.|++++.||.|++||+.+++.+..+..+. .+.+++|+|+|+ +++++.|+.|+||+++
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence 68999999999999999999988887654 699999999998 6679999999999975
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7e-40 Score=313.45 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=201.0
Q ss_pred EEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC--CC
Q 010794 147 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 224 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~--~~ 224 (501)
.++.+|.+.|++++|+|+|++||||+.|++|+|||+.++.. ..+..+ .+|...|.+++|++ ++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-----------~~~~~l----~gH~~~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-----------ILIADL----RGHEGPVWQVAWAHPMYG 71 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-----------EEEEEE----ECCSSCEEEEEECCGGGS
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-----------EEEEEE----cCCCccEEEEEeCCCCCC
Confidence 35679999999999999999999999999999999875421 111222 34678899999986 48
Q ss_pred CEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 225 TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
++|++|+.|++|+||+.... ....+.+|..+|.+++|+|+ +.+|++|+.|++|++||++++....
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~---------- 141 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE---------- 141 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE----------
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc----------
Confidence 99999999999999998653 44567899999999999998 7899999999999999987642100
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC-----------------CCEEEEEeCCCeEEE
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-----------------GSLLASCSDDVTAKI 362 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-----------------~~~l~s~s~Dg~i~i 362 (501)
....+.+|...|.+++|+|+ +++|++|+.|++|++
T Consensus 142 ----------------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~l 193 (316)
T 3bg1_A 142 ----------------------------VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKL 193 (316)
T ss_dssp ----------------------------ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCE
T ss_pred ----------------------------eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEE
Confidence 01234466677777777776 478999999999999
Q ss_pred EeCCCC---ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC---e-EEEEeeCCCCCeEEE
Q 010794 363 WNMKQD---KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG---K-LLYSLNGHREPVYSL 435 (501)
Q Consensus 363 wd~~~~---~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~---~-~~~~~~~h~~~v~~l 435 (501)
||+... ..+..+.+|...|.+++|+|++.. ...+|++|+.|++|+||++... . ....+..|...|+++
T Consensus 194 Wd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~-----~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v 268 (316)
T 3bg1_A 194 WKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL-----PTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHV 268 (316)
T ss_dssp EEECTTSCEEEEECCBCCSSCEEEEECCCCSSC-----SCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEE
T ss_pred EEeCCCCccceeeecccCCCceEEEEecCCCCC-----CCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEE
Confidence 999754 466788899999999999998621 0127999999999999998762 1 123456688999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCC
Q 010794 436 AFSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 436 ~~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
+|+|+|++||+|+.|++|++|+..
T Consensus 269 ~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 269 SWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999999999999999975
No 64
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-40 Score=329.48 Aligned_cols=309 Identities=14% Similarity=0.212 Sum_probs=248.7
Q ss_pred EECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-CCCEEEEEeCCCeEEE
Q 010794 160 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSYDGQARI 238 (501)
Q Consensus 160 ~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-~~~~l~sg~~dg~i~i 238 (501)
.|+|++..+++++ .|+.. +. .+..+ ..+|...|++++|+| ++.+|++|+.||.|+|
T Consensus 34 ~f~~~~~~~~~~~------~w~~~-g~-------------~~~~~---~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~v 90 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR-GK-------------LIATL---MENEPNSITSSAVSPGETPYLITGSDQGVIKI 90 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC-CC-------------EEEEE---CTTTTSCEEEEEEECSSSCEEEEEETTSEEEE
T ss_pred hcCCccccccccc------ccccc-ce-------------EEeee---ccCCCCceEEEEECCCCCCEEEEecCCceEEE
Confidence 3788888888765 37633 11 11222 134678899999999 9999999999999999
Q ss_pred EECCC---c--e--eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCC---CcceeEeeeec------------cC
Q 010794 239 WSTNG---D--L--KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK---TEEWKQQFEFH------------SG 296 (501)
Q Consensus 239 w~~~~---~--~--~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~---~~~~~~~~~~~------------~~ 296 (501)
|+... . . ...+ .|..+|++++|+|++++|++|+.|++|++||+. ++.....+..+ ..
T Consensus 91 wd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 169 (437)
T 3gre_A 91 WNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNE 169 (437)
T ss_dssp EEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCC
T ss_pred eECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccccc
Confidence 99643 1 1 2222 599999999999999999999999999999994 55444433322 22
Q ss_pred CeEEEec---CCCceEEEecCCCeEEEEEcCCCcceeeecC--CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q 010794 297 PTLDVDW---RNNVSFATSSTDNMIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 371 (501)
Q Consensus 297 ~~~~~~~---~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 371 (501)
.+.++.+ .+...+++++.|+.|++|++...+++..+.+ |.+.|++++|+|++++|++|+.||.|++||+++++++
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 170 YAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp CEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 3333332 2366789999999999999999999999988 8899999999999999999999999999999999988
Q ss_pred eecc-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC----------------------
Q 010794 372 HDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH---------------------- 428 (501)
Q Consensus 372 ~~~~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h---------------------- 428 (501)
..+. .|...|.+++|+|... + ...+|++|+.||.|++||+++++++..+.+|
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s----~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYG----K-NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTC----T-TEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred EEEecCCCCceEEEEeccccC----C-CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 8876 6778999998887532 1 1247899999999999999999988877654
Q ss_pred ----CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe------------------------------------
Q 010794 429 ----REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT------------------------------------ 468 (501)
Q Consensus 429 ----~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~------------------------------------ 468 (501)
...|++++|+ ++++|++|+.||.|++||+.+++.+..+.
T Consensus 325 ~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (437)
T 3gre_A 325 GIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDS 403 (437)
T ss_dssp CCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred ccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcc
Confidence 4558888998 77999999999999999999988666554
Q ss_pred --cCCCEEEEEECCC--CCEEEEEECCCeEEEEE
Q 010794 469 --GNGGIFEVCWNKE--GDKIAACFANHTVCVLD 498 (501)
Q Consensus 469 --~~~~i~~~~ws~~--g~~la~~~~d~~v~v~~ 498 (501)
+...|++++|+++ +.+|++|+.||.|+||+
T Consensus 404 ~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 404 LYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 3456899999998 77999999999999995
No 65
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-39 Score=307.86 Aligned_cols=255 Identities=27% Similarity=0.505 Sum_probs=199.1
Q ss_pred EEc-cC-CccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 147 TIL-EG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 147 ~~l-~~-H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
.++ .+ |...|++++|+|++++|++|+.|++|+||++....... ........ ..+|...|.+++|+|++
T Consensus 50 ~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~------~~~~~~~~----~~~h~~~V~~v~~sp~g 119 (330)
T 2hes_X 50 DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT------FEMDLLAI----IEGHENEVKGVAWSNDG 119 (330)
T ss_dssp EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------------CCCEEEEE----EC----CEEEEEECTTS
T ss_pred EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc------ccceeEEE----EcCCCCcEEEEEECCCC
Confidence 344 44 99999999999999999999999999999985421100 00011122 23457789999999999
Q ss_pred CEEEEEeCCCeEEEEECC-C----ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 225 TLLATGSYDGQARIWSTN-G----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~-~----~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
++|++|+.|+.|+||++. . .....+.+|...|.+++|+|++.+|++|+.|++|++||+.++..
T Consensus 120 ~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~------------ 187 (330)
T 2hes_X 120 YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW------------ 187 (330)
T ss_dssp CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------------
T ss_pred CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe------------
Confidence 999999999999999983 2 23457889999999999999999999999999999999765421
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCC--------c
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQD--------K 369 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~i~iwd~~~~--------~ 369 (501)
.++..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||+..+ .
T Consensus 188 ---------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 188 ---------------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ---------------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ---------------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 124567789999999999999 678999999999999998654 3
Q ss_pred eeeeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEE-eeCCCC-CeEEEEECC--CCC
Q 010794 370 YVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYS-LNGHRE-PVYSLAFSP--TGE 442 (501)
Q Consensus 370 ~~~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~-~~~h~~-~v~~l~~sp--dg~ 442 (501)
+...+.. |...|++++|++++ +|++|+.||.|+||+..++. .+.. +.+|.. .|++++|+| +++
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~----------~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~ 310 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG----------LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKT 310 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS----------CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----C
T ss_pred EeeecccccccceEEEEEcCCC----------EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCce
Confidence 3444544 88899999999765 58999999999999998774 3333 467877 899999999 789
Q ss_pred EEEEEeCCCcEEEEeCCC
Q 010794 443 YLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 443 ~lasgs~Dg~i~iw~~~~ 460 (501)
+||+||.||+|+||++.+
T Consensus 311 ~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 311 ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCcEEEEEecc
Confidence 999999999999999864
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.6e-38 Score=341.46 Aligned_cols=325 Identities=20% Similarity=0.279 Sum_probs=272.0
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
..+..+.+|..+|++++|+|++++|++|+.||.|++|++.++.. ...+ ..|...|++++|+|+
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~-------------~~~~----~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-------------VVDF----EAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE-------------EEEE----ECCSSCEEEEEECSS
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-------------EEEE----ecCCCCEEEEEEeCC
Confidence 34567889999999999999999999999999999999987642 1111 235678999999999
Q ss_pred CCEEEEEeCCCeEEEEECCC--ceeEeecCCCCCEEEEEecC-CCCEEEEEecCCeEEEEeCCCcceeEeeeecc-CCeE
Q 010794 224 GTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTL 299 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-~~~~ 299 (501)
+.+|++|+.||.|++|+... .....+.+|..+|.+++|+| ++..|++++.|++|++||+.++.....+..+. ..+.
T Consensus 109 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~ 188 (814)
T 3mkq_A 109 KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVN 188 (814)
T ss_dssp SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCC
T ss_pred CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEE
Confidence 99999999999999999864 45567889999999999999 88899999999999999998887777666554 6777
Q ss_pred EEecC---CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeccc
Q 010794 300 DVDWR---NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 376 (501)
Q Consensus 300 ~~~~~---~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 376 (501)
.+.|. +...+++++.|+.|++|++..+.++..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+..
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec
Confidence 88876 456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC----------eEEE-----------------------
Q 010794 377 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG----------KLLY----------------------- 423 (501)
Q Consensus 377 ~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----------~~~~----------------------- 423 (501)
+...+.+++|+|++.. .+++++ .++.+.+|++..+ +.+.
T Consensus 269 ~~~~v~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (814)
T 3mkq_A 269 GLERSWCIATHPTGRK-------NYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVE 340 (814)
T ss_dssp SSSSEEEEEECTTCGG-------GEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCC
T ss_pred CCCcEEEEEEccCCCc-------eEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccc
Confidence 9999999999998752 235555 4677888887543 2222
Q ss_pred ----------EeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCe
Q 010794 424 ----------SLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHT 493 (501)
Q Consensus 424 ----------~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~ 493 (501)
.+..+...+.+++|+|+|++|++++ |+.+.+|++....... .+.+.+++|+|+|++||++..++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~~----~~~i~~~~~spdg~~la~~~~~g~ 415 (814)
T 3mkq_A 341 QDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNKA----FGKCQDFVWGPDSNSYALIDETGQ 415 (814)
T ss_dssp SSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE----EEECSEEEECTTSSCEEEECTTCC
T ss_pred cCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccccC----CCceEEEEEeCCCCeEEEEeCCCc
Confidence 1123445688999999999999998 8999999987654332 234678899999999999999999
Q ss_pred EEEEE
Q 010794 494 VCVLD 498 (501)
Q Consensus 494 v~v~~ 498 (501)
|.+|+
T Consensus 416 v~l~~ 420 (814)
T 3mkq_A 416 IKYYK 420 (814)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99885
No 67
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-38 Score=306.01 Aligned_cols=282 Identities=14% Similarity=0.120 Sum_probs=245.0
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC-E
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT-L 226 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~-~ 226 (501)
+..+|.+.|++++|+|++.+|++|+.|+.|++|++.++... ...... ..+...|++++|+|+++ +
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----------~~~~~~----~~~~~~v~~~~~~~~~~~~ 71 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----------VDLLQS----LRYKHPLLCCNFIDNTDLQ 71 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----------EEEEEE----EECSSCEEEEEEEESSSEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----------ccceee----eecCCceEEEEECCCCCcE
Confidence 45689999999999999999999999999999998765310 011111 13567899999999999 9
Q ss_pred EEEEeCCCeEEEEEC-CCceeEeecC--CCCCEEEEEecCCCCEEEEEecCCeEEEEeCCC---------cceeEeeeec
Q 010794 227 LATGSYDGQARIWST-NGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---------EEWKQQFEFH 294 (501)
Q Consensus 227 l~sg~~dg~i~iw~~-~~~~~~~~~~--h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~---------~~~~~~~~~~ 294 (501)
|++|+.||.|++|+. .......+.+ |...|++++|+| +.+|++++.|++|++||+++ ++....+. +
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~ 149 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-V 149 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-S
T ss_pred EEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-e
Confidence 999999999999999 8777788888 999999999999 99999999999999999987 66666665 7
Q ss_pred cCCeEEEecCCCceEEEecCCCeEEEEEcCC-Cc--ceeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC--
Q 010794 295 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NR--PIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQD-- 368 (501)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~--~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~-- 368 (501)
...+.++.|.++. +++++.++.|++|++.. .. .......|...+.+++|+| ++++|++++.||.|++|++...
T Consensus 150 ~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 150 KNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp CCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred CCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 7889999998777 88999999999999987 43 3334557888999999999 9999999999999999999876
Q ss_pred ----ceeeecccCCC---------CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCeEE
Q 010794 369 ----KYVHDLREHSK---------EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYS 434 (501)
Q Consensus 369 ----~~~~~~~~~~~---------~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~~ 434 (501)
.....+..|.. .|.+++|+|++. +|++|+.||.|++||+.+++.+..+.+| ..+|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~ 299 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK---------FLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVK 299 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC---------CEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEE
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCC---------EEEEecCCceEEEEcCccHhHhhhhhcccCCCceE
Confidence 67777777755 999999999886 6899999999999999999999999998 999999
Q ss_pred EEECCCCCEEEEEeCCCc-EEEEe
Q 010794 435 LAFSPTGEYLASGSLDKS-MHIWS 457 (501)
Q Consensus 435 l~~spdg~~lasgs~Dg~-i~iw~ 457 (501)
++ |++++|++|+.||+ .+.|.
T Consensus 300 ~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 300 IA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EE--ECSSEEEEEEECTHHHHCSS
T ss_pred ec--CCCCeEEEEecCCccccccc
Confidence 99 99999999999998 55555
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-39 Score=322.55 Aligned_cols=279 Identities=19% Similarity=0.358 Sum_probs=245.4
Q ss_pred CeEEEEECCCCC-EEEEE----------eCCCeEEEEECCCce---eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEE
Q 010794 214 DVTTLDWNGEGT-LLATG----------SYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 279 (501)
Q Consensus 214 ~V~~~~~s~~~~-~l~sg----------~~dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~i 279 (501)
.|.+++|+|+++ +|++| +.|+.|+||+..... ......|...|++++|+|++.+|++|+.|++|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v 93 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL 93 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence 478899999997 99999 899999999987542 2223468899999999999999999999999999
Q ss_pred EeCCC----cceeEeeeeccCCeEEEecCC--CceEEEecCCCeEEEEEcCCCc------cee---eecCCCCceeEEEE
Q 010794 280 WDVKT----EEWKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENR------PIK---TFAGHQGEVNCVKW 344 (501)
Q Consensus 280 wd~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~------~~~---~~~~h~~~v~~v~~ 344 (501)
||+.+ ......+..|...+.++.|.+ ...+++++.|+.|++|++.... ... .+.+|...|.+++|
T Consensus 94 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 173 (416)
T 2pm9_A 94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW 173 (416)
T ss_dssp ECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE
T ss_pred eecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe
Confidence 99987 447778888999999999975 5688999999999999998775 322 34678999999999
Q ss_pred cCC-CCEEEEEeCCCeEEEEeCCCCceeeecccC------CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC---eEEEE
Q 010794 345 DPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREH------SKEIYTIRWSPTGSGTNNPNQQLILASASFDS---TVKLW 414 (501)
Q Consensus 345 ~~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~------~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg---~i~iw 414 (501)
+|+ +.+|++++.||.|++||+++++.+..+..+ ...+.+++|+|++. .+|++++.|+ .|++|
T Consensus 174 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 174 NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS--------TRVATATGSDNDPSILIW 245 (416)
T ss_dssp CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCT--------TEEEEEECCSSSCCCCEE
T ss_pred CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCC--------CEEEEEECCCCCceEEEE
Confidence 999 789999999999999999999888887766 78899999999874 2789999998 99999
Q ss_pred eCCCC-eEEEEee-CCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCC-CEEEEEE
Q 010794 415 DVELG-KLLYSLN-GHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEG-DKIAACF 489 (501)
Q Consensus 415 d~~~~-~~~~~~~-~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g-~~la~~~ 489 (501)
|++++ ..+..+. +|...|++++|+| ++.+|++++.||.|++||+.+++.+..+..+ ..|.+++|+|+| .+||+++
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred eCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe
Confidence 99986 6677787 8999999999999 9999999999999999999999998888764 469999999999 8999999
Q ss_pred CCCeEEEEEee
Q 010794 490 ANHTVCVLDFR 500 (501)
Q Consensus 490 ~d~~v~v~~~~ 500 (501)
.|+.|+||+++
T Consensus 326 ~d~~i~iw~~~ 336 (416)
T 2pm9_A 326 FDNKIEVQTLQ 336 (416)
T ss_dssp SSSEEEEEESC
T ss_pred cCCcEEEEEcc
Confidence 99999999985
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.2e-38 Score=305.78 Aligned_cols=303 Identities=19% Similarity=0.301 Sum_probs=223.2
Q ss_pred EEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC--CC
Q 010794 147 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 224 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~--~~ 224 (501)
..+.+|...|++++|+|++++||+|+.||.|++|++.++... ...... ...|...|++++|+| ++
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---------~~~~~~----~~~~~~~v~~~~~~~~~d~ 71 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN---------WELSDS----WRAHDSSIVAIDWASPEYG 71 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC---------EEEEEE----EECCSSCEEEEEECCGGGC
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc---------ceecce----eccCCCcEEEEEEcCCCCC
Confidence 467899999999999999999999999999999999764311 111112 234578899999999 69
Q ss_pred CEEEEEeCCCeEEEEECCC----------ceeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCCCcceeEeee
Q 010794 225 TLLATGSYDGQARIWSTNG----------DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFE 292 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~----------~~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 292 (501)
.+|++|+.||.|++|+... .....+..|..+|++++|+|+ +.+|++++.|++|++||++++.....+.
T Consensus 72 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 72 RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccc
Confidence 9999999999999999865 335677889999999999999 9999999999999999998877554433
Q ss_pred -------------eccCCeEEEecCC----CceEEEecCCCeEEEEEcCCCcc--eeeecCCCCceeEEEEcCCC----C
Q 010794 293 -------------FHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTG----S 349 (501)
Q Consensus 293 -------------~~~~~~~~~~~~~----~~~~~~~~~d~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~----~ 349 (501)
.+...+.++.|.+ ...+++++.++.+.+|....... +..+.+|...|.+++|+|++ +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQ 231 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSE
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcce
Confidence 3455677787764 56788999999998887776654 67788999999999999998 8
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC
Q 010794 350 LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR 429 (501)
Q Consensus 350 ~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~ 429 (501)
+|++|+.||.|++||++.+........+........+++...... .....+.....+.+|+....+.+..+.+|.
T Consensus 232 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 306 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDA-----QGRSDSNTEEKAELQSNLQVELLSEHDDHN 306 (351)
T ss_dssp EEEEEETTSCEEEEEEEECC--------------------------------------------CCSEEEEEEEEECTTS
T ss_pred EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccc-----ccccccccceeeeecccccccEEEEEeccc
Confidence 999999999999999987654433322222222222222221000 011233445567777777778889999999
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010794 430 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 467 (501)
Q Consensus 430 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 467 (501)
..|++++|+|++++|++|+.||.|+||++.+++.+..+
T Consensus 307 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 307 GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp SCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 99999999999999999999999999999987655443
No 70
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-38 Score=306.33 Aligned_cols=247 Identities=21% Similarity=0.359 Sum_probs=202.7
Q ss_pred ceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 145 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
....+.+|...|++++|+|++.+|+||+.|++|++||+.++.. +..+ .+|...|.+++|+|++
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~-------------~~~~----~~h~~~v~~v~~sp~~ 130 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTT-------------YKRF----VGHQSEVYSVAFSPDN 130 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCE-------------EEEE----ECCCSCEEEEEECSST
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-------------EEEE----cCCCCcEEEEEECCCC
Confidence 3467899999999999999999999999999999999976532 1122 2457789999999999
Q ss_pred CEEEEEeCCCeEEEEECCCceeEeec---CCCCCEEEEEecCCC----------CEEEEEecCCeEEEEeCCCcceeEee
Q 010794 225 TLLATGSYDGQARIWSTNGDLKCTLS---KHKGPIFSLKWNKKG----------DYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~~~~~~~---~h~~~V~~l~~~~~~----------~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
++|++|+.|+.|++|+..+.....+. +|...|.+++|+|++ .+|++++.|++|++||... .
T Consensus 131 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~----- 204 (343)
T 2xzm_R 131 RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-Q----- 204 (343)
T ss_dssp TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-E-----
T ss_pred CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-c-----
Confidence 99999999999999998765544433 789999999999987 6899999999999998421 1
Q ss_pred eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-e
Q 010794 292 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-Y 370 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~-~ 370 (501)
....+.+|...|.+++|+|+|++|++|+.||.|++||+.... .
T Consensus 205 ------------------------------------~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 205 ------------------------------------IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp ------------------------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred ------------------------------------eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 123456789999999999999999999999999999995433 3
Q ss_pred eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE--Eee-----------CCCCCeEEEEE
Q 010794 371 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY--SLN-----------GHREPVYSLAF 437 (501)
Q Consensus 371 ~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~-----------~h~~~v~~l~~ 437 (501)
...+ .+...|.+++|+|++. +++ ++.|+.|++||+.+++... .+. +|...|++++|
T Consensus 249 ~~~~-~~~~~v~~v~~sp~~~---------~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 317 (343)
T 2xzm_R 249 QREF-DAGSTINQIAFNPKLQ---------WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAW 317 (343)
T ss_dssp SEEE-ECSSCEEEEEECSSSC---------EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEE
T ss_pred ceee-cCCCcEEEEEECCCCC---------EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEE
Confidence 3333 3556799999999875 555 5568889999998765432 443 68888999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
+|+|++|++|+.||+|++|++.++
T Consensus 318 sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 318 NALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCCCeEEEecCCceEEEEEEEcc
Confidence 999999999999999999998654
No 71
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.1e-39 Score=313.64 Aligned_cols=289 Identities=13% Similarity=0.130 Sum_probs=221.3
Q ss_pred cceeEEEECCCCCEEEEEECCC-------cEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCE
Q 010794 154 SEVCACAWSPAGSLLASGSGDS-------TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 226 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~-------~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~ 226 (501)
.+|+|++|+|||++|++||.|. .|++|++......... ....... .....+...|.+++++ +..
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~-----~~~~~~~--~~l~~~~~~v~s~~~~--~~~ 85 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE-----QFHILSE--FALEDNDDSPTAIDAS--KGI 85 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH-----HEEEEEE--EECCTTSCCCCEEEEE--TTE
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee-----eeeeeeE--EEccCCCCceEEEEeC--CCE
Confidence 4799999999999999998654 5999998754321100 0011111 1122345667777765 456
Q ss_pred EEEE-----------eCCCeEEEEECCCc--eeE---e-----ecCCCCCEEEEEecCCCCEEEEE--ecCCeEEEEeCC
Q 010794 227 LATG-----------SYDGQARIWSTNGD--LKC---T-----LSKHKGPIFSLKWNKKGDYLLTG--SCDKTAIVWDVK 283 (501)
Q Consensus 227 l~sg-----------~~dg~i~iw~~~~~--~~~---~-----~~~h~~~V~~l~~~~~~~~l~s~--s~D~~i~iwd~~ 283 (501)
+++| +.|+.+|+|+.... ... . ...+...+.+++|+|+|++|+++ +.|++|+|||+.
T Consensus 86 ~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~ 165 (365)
T 4h5i_A 86 ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS 165 (365)
T ss_dssp EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT
T ss_pred EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC
Confidence 6655 45778999986432 111 1 12344568999999999997654 468999999999
Q ss_pred CcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCccee--eecCCCCceeEEEEcCCCCEEEEEeCCC---
Q 010794 284 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDDV--- 358 (501)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~Dg--- 358 (501)
+++.+..+. |...+.++.|.++..+++++.++.+.+|+...+..+. ...+|...|.+++|+|+++++++++.|+
T Consensus 166 ~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 166 DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred CCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 998887775 6678999999876655554456667777776665543 3457888999999999999999999887
Q ss_pred -eEEEEeCCCCce----eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCe
Q 010794 359 -TAKIWNMKQDKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPV 432 (501)
Q Consensus 359 -~i~iwd~~~~~~----~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v 432 (501)
.+++|++..... ...+..|...|++++|+|+|. +||+|+.|++|+|||+++++++..+ .+|..+|
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~---------~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE---------LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC---------EEEEEETTSCEEEEETTTTEEEEEETTSSSSCE
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECCCCC---------ceEEEcCCCEEEEEECCCCcEEEEecCcccCCE
Confidence 688898766543 345678889999999999997 8999999999999999999999885 7899999
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 433 YSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 433 ~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
++|+|||||++|||||.|++|+||++...
T Consensus 316 ~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 316 TEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999999999643
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-39 Score=320.51 Aligned_cols=292 Identities=18% Similarity=0.228 Sum_probs=237.8
Q ss_pred cCCCceEEc-cCCccceeEEEECC-CCCEEEEEECCCcEEEEecCC---CCCCCCCCCCCceEEEEEeeccccccCCCCe
Q 010794 141 IPNSDVTIL-EGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIAD---GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV 215 (501)
Q Consensus 141 ~~~~~~~~l-~~H~~~V~~~~~sp-~~~~l~sgs~D~~i~iWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 215 (501)
.....+..+ .+|.+.|++++|+| ++.+|+||+.||+|+|||+.+ +.... . . ....|...|
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----~--~--------~~~~h~~~v 114 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS-----S--S--------LTYDCSSTV 114 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-----C--S--------EEEECSSCE
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-----e--e--------eeccCCCCE
Confidence 334556677 89999999999999 999999999999999999875 22100 0 0 001256789
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECC----CceeEeec----------C--CCCCEEEEE--ecCCCCEEEEEecCCeE
Q 010794 216 TTLDWNGEGTLLATGSYDGQARIWSTN----GDLKCTLS----------K--HKGPIFSLK--WNKKGDYLLTGSCDKTA 277 (501)
Q Consensus 216 ~~~~~s~~~~~l~sg~~dg~i~iw~~~----~~~~~~~~----------~--h~~~V~~l~--~~~~~~~l~s~s~D~~i 277 (501)
++++|+|++.+|++|+.||.|++|++. +.....+. . +...+.++. +++++.+|++|+.|++|
T Consensus 115 ~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 194 (437)
T 3gre_A 115 TQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRV 194 (437)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeE
Confidence 999999999999999999999999973 33222221 1 556677776 56889999999999999
Q ss_pred EEEeCCCcceeEeeee--ccCCeEEEecCC-CceEEEecCCCeEEEEEcCCCcceeeec-CCCCceeEEEEcC----CCC
Q 010794 278 IVWDVKTEEWKQQFEF--HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDP----TGS 349 (501)
Q Consensus 278 ~iwd~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~----~~~ 349 (501)
++||+++++....+.. |...+.++.|.+ ...+++++.|+.|++|++....++..+. +|...|.+++|+| ++.
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc
Confidence 9999999999998887 889999999965 4568889999999999999999888876 7888999996654 678
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeecccCC--------------------------CCEEEEEEcCCCCCCCCCCCcEEEE
Q 010794 350 LLASCSDDVTAKIWNMKQDKYVHDLREHS--------------------------KEIYTIRWSPTGSGTNNPNQQLILA 403 (501)
Q Consensus 350 ~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~--------------------------~~v~~i~~~p~g~~~~~~~~~~~l~ 403 (501)
+|++|+.||.|++||+.+++++..+..|. ..|.+++|+ ++ .+|+
T Consensus 275 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~---------~~l~ 344 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND---------KILL 344 (437)
T ss_dssp EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT---------EEEE
T ss_pred EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc---------eEEE
Confidence 99999999999999999988777766554 345555555 32 3799
Q ss_pred EEeCCCeEEEEeCCCCeEEEEeeC-------------------------------------CCCCeEEEEECCC--CCEE
Q 010794 404 SASFDSTVKLWDVELGKLLYSLNG-------------------------------------HREPVYSLAFSPT--GEYL 444 (501)
Q Consensus 404 sgs~dg~i~iwd~~~~~~~~~~~~-------------------------------------h~~~v~~l~~spd--g~~l 444 (501)
+|+.||.|++||+.+++.+..+.+ |...|++|+|+++ +.+|
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l 424 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLL 424 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEE
T ss_pred ecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEE
Confidence 999999999999998877666655 8899999999998 7899
Q ss_pred EEEeCCCcEEEEe
Q 010794 445 ASGSLDKSMHIWS 457 (501)
Q Consensus 445 asgs~Dg~i~iw~ 457 (501)
++|+.||.|+||+
T Consensus 425 ~s~~~dG~I~iw~ 437 (437)
T 3gre_A 425 VACDNSGLIGIFQ 437 (437)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEcCCceEEEeC
Confidence 9999999999995
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.4e-37 Score=306.11 Aligned_cols=275 Identities=23% Similarity=0.465 Sum_probs=239.0
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCc-eeE--eecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEe
Q 010794 214 DVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 290 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~--~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 290 (501)
.+..|+||++ ++|++|. |++|+|||.... ... .+.+|...|++|+|+|+|++|++|+.|++|++||+.+++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4678999986 4777665 999999998653 333 3457888999999999999999999999999999999999999
Q ss_pred eeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCC-cceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q 010794 291 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 369 (501)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~ 369 (501)
+..|...+.++.+. ...+++++.|+.+++|+.... ..+..+.+|...+.++.|+|++.++++++.|+.+++|+..++.
T Consensus 185 ~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 185 MTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp ECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred EeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 99999999998885 457889999999999998764 4567788999999999999999999999999999999998764
Q ss_pred e----eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEE--EEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCE
Q 010794 370 Y----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA--SASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEY 443 (501)
Q Consensus 370 ~----~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~--sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~ 443 (501)
. +.....|...|.+++|+|.+.. +++ +|+.|++|++||+.+++++..+..| ..|.++.|+|++..
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~--------~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~ 334 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSN--------VLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKE 334 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTT--------EEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTE
T ss_pred ccceeeeeecccCCceeeeeeCCCccc--------EEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCe
Confidence 3 4556778899999999998752 444 4568999999999999999988865 57899999999999
Q ss_pred EEEEe--CCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 444 LASGS--LDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 444 lasgs--~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|++++ .|+.|+|||+.+++.+.++.++. .|++++|+|+|++||+|+.|++|+|||+.
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 98765 79999999999999999998754 69999999999999999999999999974
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=305.49 Aligned_cols=281 Identities=14% Similarity=0.239 Sum_probs=236.1
Q ss_pred cCCCCeEEEEECCCCCEE-EEEeC---CCeEEEEECCCcee--EeecCCCCCEEEEEecCC---CCEEEEEecCCeEEEE
Q 010794 210 EKSKDVTTLDWNGEGTLL-ATGSY---DGQARIWSTNGDLK--CTLSKHKGPIFSLKWNKK---GDYLLTGSCDKTAIVW 280 (501)
Q Consensus 210 ~~~~~V~~~~~s~~~~~l-~sg~~---dg~i~iw~~~~~~~--~~~~~h~~~V~~l~~~~~---~~~l~s~s~D~~i~iw 280 (501)
+|...|.+++|+|++..+ ++|+. |+.|+||+...... ....+|..+|++++|+|+ +.+|++|+.|++|++|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 367889999999999655 56665 99999999875433 223479999999999998 6999999999999999
Q ss_pred eCCCcc-eeEeeeeccCCeEEEecC-------CCceEEEecCCCeEEEEEcCCCc-ceeeecCCCC----ceeEEE----
Q 010794 281 DVKTEE-WKQQFEFHSGPTLDVDWR-------NNVSFATSSTDNMIYVCKIGENR-PIKTFAGHQG----EVNCVK---- 343 (501)
Q Consensus 281 d~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~~h~~----~v~~v~---- 343 (501)
|+.++. ....+..|...+.++.|. +...+++++.|+.|++|++.... ++..+..|.+ .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 999887 788888999999998652 34578999999999999998876 7777776654 788888
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcC---CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe
Q 010794 344 WDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP---TGSGTNNPNQQLILASASFDSTVKLWDVELGK 420 (501)
Q Consensus 344 ~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p---~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 420 (501)
|+|++++|++++.||.|++||+++++... ...|...+.+++|+| ++. +|++|+.||.|++||+++++
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~---------~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMN---------KLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCC---------EEEEEESTTEEEEEEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCC---------EEEEECCCCeEEEEeCcCCC
Confidence 78999999999999999999999887754 356788999999999 664 78999999999999998765
Q ss_pred EEEEe-----eCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-------------------eeEEEEecC-CCEE
Q 010794 421 LLYSL-----NGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEG-------------------KIVKTYTGN-GGIF 474 (501)
Q Consensus 421 ~~~~~-----~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~-------------------~~~~~~~~~-~~i~ 474 (501)
.+..+ .+|...|++++|+|+++ +|++|+.||.|++|++.++ +.+..+..+ ..|.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 54333 48999999999999998 8999999999999998754 345555544 4699
Q ss_pred EEEECCCCCEEE-EEECCCeEEEEEee
Q 010794 475 EVCWNKEGDKIA-ACFANHTVCVLDFR 500 (501)
Q Consensus 475 ~~~ws~~g~~la-~~~~d~~v~v~~~~ 500 (501)
+++|+|+|++|| +|+.|+.|+|||+.
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 999999999998 79999999999985
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=304.52 Aligned_cols=293 Identities=18% Similarity=0.301 Sum_probs=240.8
Q ss_pred cCCCceEEccCCccceeEEEECCC---CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEE
Q 010794 141 IPNSDVTILEGHTSEVCACAWSPA---GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 217 (501)
Q Consensus 141 ~~~~~~~~l~~H~~~V~~~~~sp~---~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 217 (501)
.|...+..+.+|...|++++|+|+ |++|++|+.||.|++|++.+... . .... ...|...|++
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------~--~~~~----~~~h~~~v~~ 91 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------T--IPKA----QQMHTGPVLD 91 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------E--EEEE----EEECSSCEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------e--eEEE----eccccCCEEE
Confidence 455667889999999999999999 69999999999999999976211 0 1111 2235678999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEe--cCCCCEEEEEecCCeEEEEeCCCcceeEeeeecc
Q 010794 218 LDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKW--NKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 218 ~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~--~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
++|+|++++|++|+.||.|++|+........+..|..+|++++| +|++.+|++++.|++|++||+++++....+..+.
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 99999999999999999999999987776677889999999999 8999999999999999999999998888777654
Q ss_pred CCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeee--cCCCCceeEEEEcCCCCE----EEEEeCCCeEEEEeCCCC-
Q 010794 296 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF--AGHQGEVNCVKWDPTGSL----LASCSDDVTAKIWNMKQD- 368 (501)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~----l~s~s~Dg~i~iwd~~~~- 368 (501)
.+.++.+... .+++++.++.+.+|++......... ..+...+.++++.++... +++++.||.|++|+++..
T Consensus 172 -~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 172 -RCYCADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp -CEEEEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred -CceEEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 4555665544 5667777889999999765433222 223455667777666554 999999999999999877
Q ss_pred --ceeeecccCCC------------CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEE
Q 010794 369 --KYVHDLREHSK------------EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS 434 (501)
Q Consensus 369 --~~~~~~~~~~~------------~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 434 (501)
..+..+..|.. .|.+++|+|++. +|++|+.||.|++||+.+++++..+.+|..+|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 320 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG---------TLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA 320 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC---------CEEEEETTSCEEEEETTTTEEEEECCCCSSCEEE
T ss_pred ccccceeeeeeecccccccccccccceEEEEEecCCC---------EEEEEccCCeEEEEECCCCcEEEEecCCCCCceE
Confidence 45566666665 799999999986 7899999999999999999999999999999999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCC
Q 010794 435 LAFSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 435 l~~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
++|+|+|++||+|+.|+..+.|++.
T Consensus 321 ~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 321 CCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEECCCCCeEEEEeccccccccccc
Confidence 9999999999999998865555543
No 76
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-37 Score=306.59 Aligned_cols=249 Identities=26% Similarity=0.424 Sum_probs=207.8
Q ss_pred CccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe
Q 010794 152 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 152 H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
+...|++++|+|+|++|++|+.|++|+|||+.++.. ...+ .+|...|.+++|+|++.+|++|+
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~-------------~~~~----~~h~~~v~~~~~~p~~~~l~s~s 184 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI-------------VMIL----QGHEQDIYSLDYFPSGDKLVSGS 184 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-------------EEEE----CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE-------------EEEE----ccCCCCEEEEEEcCCCCEEEEec
Confidence 334599999999999999999999999999876531 1122 34577899999999999999999
Q ss_pred CCCeEEEEECCCceeEeecCCCCCEEEEEecC-CCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEE
Q 010794 232 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 310 (501)
Q Consensus 232 ~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (501)
.|+.|++||+..........+...|.+++|+| ++.+|++|+.|++|++||++++.....+..
T Consensus 185 ~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~----------------- 247 (393)
T 1erj_A 185 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS----------------- 247 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------------
T ss_pred CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc-----------------
Confidence 99999999987654333334677899999999 899999999999999999988765443321
Q ss_pred EecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC------------ceeeecccCC
Q 010794 311 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD------------KYVHDLREHS 378 (501)
Q Consensus 311 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~------------~~~~~~~~~~ 378 (501)
......+|...|.+++|+|++++|++|+.|++|++||+.+. .+...+.+|.
T Consensus 248 -----------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~ 310 (393)
T 1erj_A 248 -----------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 310 (393)
T ss_dssp ----------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS
T ss_pred -----------------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc
Confidence 01123578999999999999999999999999999998753 3445677899
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECC------CCCEEEEEeCCCc
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP------TGEYLASGSLDKS 452 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp------dg~~lasgs~Dg~ 452 (501)
..|.+++|+|++. +|++|+.|+.|++||+.+++.+..+.+|...|++++|+| ++++||+||.||+
T Consensus 311 ~~v~~~~~~~~~~---------~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 311 DFVLSVATTQNDE---------YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp SCEEEEEECGGGC---------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred CcEEEEEECCCCC---------EEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 9999999999886 899999999999999999999999999999999999986 6889999999999
Q ss_pred EEEEeCCC
Q 010794 453 MHIWSLKE 460 (501)
Q Consensus 453 i~iw~~~~ 460 (501)
|+||++..
T Consensus 382 i~iW~~~~ 389 (393)
T 1erj_A 382 ARIWKYKK 389 (393)
T ss_dssp EEEEEEEE
T ss_pred EEECcccc
Confidence 99999754
No 77
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=308.34 Aligned_cols=278 Identities=21% Similarity=0.363 Sum_probs=246.4
Q ss_pred CCCCeEEEEECCCCC-EEEEEeCCCeEEEEEC----CCce-------eEeecC----------CCCCEEEEEecCCCCEE
Q 010794 211 KSKDVTTLDWNGEGT-LLATGSYDGQARIWST----NGDL-------KCTLSK----------HKGPIFSLKWNKKGDYL 268 (501)
Q Consensus 211 ~~~~V~~~~~s~~~~-~l~sg~~dg~i~iw~~----~~~~-------~~~~~~----------h~~~V~~l~~~~~~~~l 268 (501)
|...|++++|+|+++ +|++|+.||.|++|+. .... ...+.. |.+.|++++|+|++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 356899999999999 9999999999999998 5433 333333 68899999999999999
Q ss_pred EEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEEecCCCeEEEEEcCCCcceeeecCCCCc---------
Q 010794 269 LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE--------- 338 (501)
Q Consensus 269 ~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~--------- 338 (501)
++|+.|+.|++|| .++.....+..|..++.++.|.+ ...+++++.|+.|++|++..+..+..+..+...
T Consensus 124 ~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 9999999999999 67777888888999999999965 456888999999999999999988888887776
Q ss_pred ------eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEE
Q 010794 339 ------VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 412 (501)
Q Consensus 339 ------v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~ 412 (501)
+.+++|+|++ .+++++.||.|++||+.+++.+..+..|...+.+++|+|++. +|++++.||.|+
T Consensus 203 ~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~l~~~~~d~~i~ 272 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK---------LLLSASDDGTLR 272 (425)
T ss_dssp ---CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT---------EEEEEETTSCEE
T ss_pred cCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC---------EEEEEcCCCEEE
Confidence 9999999875 588899999999999999998888989999999999999886 789999999999
Q ss_pred EEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECC
Q 010794 413 LWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 413 iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~d 491 (501)
+||+++++.+..+.+|...|.+++|+|++ +|++++.|+.|++|++.+++.+..+.. ...+.+++|+|+|++||+++.|
T Consensus 273 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 99999999999999999999999999999 999999999999999999999888876 4579999999999999999999
Q ss_pred CeEEEEEee
Q 010794 492 HTVCVLDFR 500 (501)
Q Consensus 492 ~~v~v~~~~ 500 (501)
+.|.|||++
T Consensus 352 g~i~i~~~~ 360 (425)
T 1r5m_A 352 GQVNVYDLK 360 (425)
T ss_dssp SCEEEEECH
T ss_pred CeEEEEECC
Confidence 999999975
No 78
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-38 Score=303.74 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=205.7
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecC--CCCEEEEEecCCeEEEEeCC
Q 010794 209 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVK 283 (501)
Q Consensus 209 ~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~--~~~~l~s~s~D~~i~iwd~~ 283 (501)
.+|...|++++|+|+|++|++|+.|++|+||++... ....+.+|.++|++++|+| ++++|++|+.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 356789999999999999999999999999998643 3457889999999999986 48899999999999999987
Q ss_pred CcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC--CCEEEEEeCCCeEE
Q 010794 284 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAK 361 (501)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~i~ 361 (501)
++.+ ..+..+.+|...|.+++|+|+ +.+|++|+.|++|+
T Consensus 90 ~~~~---------------------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 90 NGTW---------------------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp SSCC---------------------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred CCcc---------------------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 6532 122346689999999999998 78999999999999
Q ss_pred EEeCCCCce---eeecccCCCCEEEEEEcCCCCCC--------CCCCCcEEEEEEeCCCeEEEEeCCCC---eEEEEeeC
Q 010794 362 IWNMKQDKY---VHDLREHSKEIYTIRWSPTGSGT--------NNPNQQLILASASFDSTVKLWDVELG---KLLYSLNG 427 (501)
Q Consensus 362 iwd~~~~~~---~~~~~~~~~~v~~i~~~p~g~~~--------~~~~~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~ 427 (501)
+||++.... ...+..|...+.+++|+|+.... ..+....+|++|+.|+.|++||++.. +++..+.+
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~ 210 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA 210 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC
T ss_pred EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc
Confidence 999987532 35567888899999999974210 00111236899999999999999755 46778899
Q ss_pred CCCCeEEEEECCCC----CEEEEEeCCCcEEEEeCCCC---e-eEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 428 HREPVYSLAFSPTG----EYLASGSLDKSMHIWSLKEG---K-IVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 428 h~~~v~~l~~spdg----~~lasgs~Dg~i~iw~~~~~---~-~~~~~~-~~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
|..+|++++|+|++ .+||+|+.|++|+||++.++ . ....+. ....|++++|+|+|++||+|+.|++|+||+
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 99999999999987 89999999999999998762 1 112222 345799999999999999999999999999
Q ss_pred ee
Q 010794 499 FR 500 (501)
Q Consensus 499 ~~ 500 (501)
..
T Consensus 291 ~~ 292 (316)
T 3bg1_A 291 ES 292 (316)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-36 Score=301.10 Aligned_cols=298 Identities=25% Similarity=0.462 Sum_probs=239.0
Q ss_pred cCCCceEEccCCc----cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeE
Q 010794 141 IPNSDVTILEGHT----SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 216 (501)
Q Consensus 141 ~~~~~~~~l~~H~----~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 216 (501)
+|..+..+|..-. --++.|+||++ ++||+| .|++|+|||+.++... ..+. ...|...|+
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~-------------~~~~--~~~~~~~V~ 151 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDIL-------------QLLQ--MEQPGEYIS 151 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEE-------------EEEE--CCSTTCCEE
T ss_pred cCCCCceEEECCCCcccccceeEEECCC-CEEEEE-eCCEEEEEECCCCCEE-------------EEEE--ecCCCCcEE
Confidence 4444445554321 23678999976 467666 5999999999876421 1111 124567899
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc-ceeEeeeec
Q 010794 217 TLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFH 294 (501)
Q Consensus 217 ~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~ 294 (501)
+++|+|+|++|++|+.||.|+||+... .....+.+|...|.++.|+ +..|++|+.|+.+++||.... .....+..|
T Consensus 152 sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 152 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEeccc
Confidence 999999999999999999999999864 5567889999999998875 579999999999999998764 455677888
Q ss_pred cCCeEEEecCC-CceEEEecCCCeEEEEEcCCCc----ceeeecCCCCceeEEEEcCCCC-EEEE--EeCCCeEEEEeCC
Q 010794 295 SGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGS-LLAS--CSDDVTAKIWNMK 366 (501)
Q Consensus 295 ~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~----~~~~~~~h~~~v~~v~~~~~~~-~l~s--~s~Dg~i~iwd~~ 366 (501)
...+..+.+.. ...+++++.|+.+++|+...+. .+..+..|.+.|.+++|+|.+. ++++ |+.|++|++||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 88888888864 5678899999999999987654 4566778999999999999765 4554 4589999999999
Q ss_pred CCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEE
Q 010794 367 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 367 ~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 446 (501)
++.++..+..+ ..+.++.|+|++. .+++++|+.|+.|+|||+.+++++.++.+|...|++|+|+|+|++|||
T Consensus 310 t~~~~~~~~~~-~~v~~~~~~~~~~-------~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 310 SGACLSAVDAH-SQVCSILWSPHYK-------ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp TTEEEEEEECS-SCEEEEEEETTTT-------EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred ccccceeeccc-cceeeeeecCCCC-------eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 99988877654 5788999999875 122333457999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEeCCCCeeEE
Q 010794 447 GSLDKSMHIWSLKEGKIVK 465 (501)
Q Consensus 447 gs~Dg~i~iw~~~~~~~~~ 465 (501)
||.|++|+||++.+....+
T Consensus 382 ~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 382 AAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EETTTEEEEECCSCSSCC-
T ss_pred EecCCeEEEEECCCCCccc
Confidence 9999999999997654433
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.3e-37 Score=309.59 Aligned_cols=293 Identities=22% Similarity=0.402 Sum_probs=238.3
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
...+|...|+|++| ++++|++|+.||.|++||+.++.. ...+ .+|...|++++| ++.+|
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~-------------~~~~----~~h~~~v~~l~~--~~~~l 186 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC-------------KRIL----TGHTGSVLCLQY--DERVI 186 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCE-------------EEEE----CCCSSCEEEEEC--CSSEE
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeE-------------EEEE----cCCCCcEEEEEE--CCCEE
Confidence 34567888999887 799999999999999999876532 1122 245778999999 78899
Q ss_pred EEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCccee---EeeeeccCCeEEEec
Q 010794 228 ATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK---QQFEFHSGPTLDVDW 303 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~ 303 (501)
++|+.||.|++|+.. +.....+.+|...|.+++|++ .+|++|+.|++|++||+.++... ..+..|...+.++.|
T Consensus 187 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 187 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp EEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 999999999999976 456678889999999999974 59999999999999999887655 566778889999998
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEE
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 383 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~ 383 (501)
+...+++++.|+.|++|++....++..+.+|...|.+++|+ +.+|++|+.||.|++||+++++.+..+..|...|.+
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 341 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred -CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEE
Confidence 56688999999999999999999999999999999999994 789999999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---------EEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 010794 384 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK---------LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMH 454 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 454 (501)
++| ++. +|++|+.||.|++||+.++. ++..+.+|..+|++++| ++.+|++|+.||+|+
T Consensus 342 ~~~--~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~ 408 (435)
T 1p22_A 342 IRF--DNK---------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 408 (435)
T ss_dssp EEC--CSS---------EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEE
T ss_pred EEe--cCC---------EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEE
Confidence 998 332 79999999999999987665 88899999999999999 788999999999999
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEEC
Q 010794 455 IWSLKEGKIVKTYTGNGGIFEVCWN 479 (501)
Q Consensus 455 iw~~~~~~~~~~~~~~~~i~~~~ws 479 (501)
+|++.+...............+.|.
T Consensus 409 iwd~~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 409 IWDFLNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp EEC----------------------
T ss_pred EEECCCCCCcccCCCCCCccceeee
Confidence 9999887655444433344455543
No 81
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=285.70 Aligned_cols=276 Identities=22% Similarity=0.457 Sum_probs=235.4
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCC-ceeEe--ecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 215 VTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCT--LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~--~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
..+|+||+++ +|++| .|++|+|||... ..... +.+|...|++++|+|++++|++|+.|++|++||+.+++....+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5679999986 66665 599999999864 44443 4578889999999999999999999999999999999999999
Q ss_pred eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCC-cceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 010794 292 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 370 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~ 370 (501)
..|...+..+.+.. ..+++++.++.+++|+.... ..+..+.+|...+.++.+++++++|++++.||+|++||+.+++.
T Consensus 106 ~~h~~~~~~~~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 106 TSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp ECCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred cCccceEEEeecCC-CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 99998888776654 46788999999999998765 45677889999999999999999999999999999999987653
Q ss_pred ----eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEE
Q 010794 371 ----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 371 ----~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 446 (501)
......+...+..+.++|.+.. ...+++++.+++|++||........... +...+..+.|+|++..+++
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSN------VLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTT------EEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred cccceeeecccCCceEEEEecCCCCc------EEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEE
Confidence 3344567788999999987642 2345678889999999999888776655 6678999999999998877
Q ss_pred Ee--CCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 447 GS--LDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 447 gs--~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++ .|+.|+|||+.+++++.++.++ +.|++++|+|+|++||+|+.|++|+|||+.
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 65 7999999999999999999875 469999999999999999999999999974
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-36 Score=305.73 Aligned_cols=269 Identities=28% Similarity=0.437 Sum_probs=241.8
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 215 VTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
+.++.+ ++.+|++|+.||.|++|+.. +.....+.+|.++|++++|+|++ +|++|+.||+|++||+.+++....+..
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 566666 56799999999999999976 45666788999999999999988 999999999999999999999999999
Q ss_pred ccCCeEEEecC---CCceEEEecCCCeEEEEEcCCCcc-----------------------eeeecCCCCceeEEEEcCC
Q 010794 294 HSGPTLDVDWR---NNVSFATSSTDNMIYVCKIGENRP-----------------------IKTFAGHQGEVNCVKWDPT 347 (501)
Q Consensus 294 ~~~~~~~~~~~---~~~~~~~~~~d~~i~~~~~~~~~~-----------------------~~~~~~h~~~v~~v~~~~~ 347 (501)
|..++.++.|. +...+++++.|+.|++|++..... +..+.+|...+.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 99999988875 447789999999999999986542 44677888888877 577
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010794 348 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG 427 (501)
Q Consensus 348 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 427 (501)
+++|++|+.||.|++||+.+++.+..+..|...+.+++|+|++. +|++|+.||.|++||+++++++..+.+
T Consensus 280 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~ 350 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK---------RCISASMDTTIRIWDLENGELMYTLQG 350 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT---------EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC---------EEEEEeCCCcEEEEECCCCcEEEEEeC
Confidence 89999999999999999999999999999999999999999986 789999999999999999999999999
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 428 HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 428 h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|...|.+++|+ +.+|++|+.||.|++||+.++.....+.....+..++|+|+|++|++|+ ++.|.|||++
T Consensus 351 h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 351 HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 99999999997 5799999999999999999988777776666788899999999999998 8999999975
No 83
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.3e-38 Score=311.46 Aligned_cols=284 Identities=13% Similarity=0.121 Sum_probs=238.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCcee-EeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeee
Q 010794 214 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 292 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 292 (501)
.+++++|+|++++|++|+.|+.|++|+...... ..+..| ..+....|+|++++|++|+.|+.|++||+.++.....+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 356789999999999999999999999865432 233444 445555789999999999999999999999998888888
Q ss_pred eccCCeEEEecCC-CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q 010794 293 FHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 371 (501)
Q Consensus 293 ~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 371 (501)
.|...+.++.|.+ ...+++++.|+.|++|++...+.+..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 8999999999975 457889999999999999999999999999999999999999999999999999999999999888
Q ss_pred eeccc---CCCCEEEEEEcCCCC-------------CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CCCCCeEE
Q 010794 372 HDLRE---HSKEIYTIRWSPTGS-------------GTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GHREPVYS 434 (501)
Q Consensus 372 ~~~~~---~~~~v~~i~~~p~g~-------------~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~ 434 (501)
..+.. +...+.+++|.|.+. ...+|+. .+|++|+.||.|++||+++++.+..+. +|...|++
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCCcee
Confidence 87764 566788888765432 1223333 367899999999999999998877764 58889999
Q ss_pred EEECCCCC-EEEEEeCCCcEEEEeCCCCee-EEEEec--CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 435 LAFSPTGE-YLASGSLDKSMHIWSLKEGKI-VKTYTG--NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 435 l~~spdg~-~lasgs~Dg~i~iw~~~~~~~-~~~~~~--~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++|+|+++ +|++|+.||.|++||+++++. +..+.. ...+..+.| ++|++|++++.|+.|+||++.
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEEC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEecc
Confidence 99999998 999999999999999998753 566654 334667754 688899999999999999975
No 84
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-38 Score=317.45 Aligned_cols=294 Identities=12% Similarity=0.087 Sum_probs=220.2
Q ss_pred EEccCCccceeEEEECCC------CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE
Q 010794 147 TILEGHTSEVCACAWSPA------GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 220 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~------~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 220 (501)
.++.+|.+.|.+++|+|+ +.+||||+.||+|+||++..+...... ............+|...|++++|
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~------~~~~~~p~~~l~~h~~~v~sv~~ 274 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV------FKMCEKPSLTLSLADSLITTFDF 274 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE------EECCCSCSEEECCTTTCEEEEEE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc------ceeecCceEEEEcCCCCEEEEEe
Confidence 346778899999999997 579999999999999999765422100 00000000112345688999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCc--eeEeecCCCCCEEEE--EecCCC-CEEEEEecCCeEEEEeCCCcceeEeeeecc
Q 010794 221 NGEGTLLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSL--KWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 221 s~~~~~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l--~~~~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
++++ .|++|+.||+|++||+... ....+.+|..+|++| .|+|++ ++|+||+.|++|+|||+++++....+..|.
T Consensus 275 s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 275 LSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp SSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC
T ss_pred cCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc
Confidence 9864 8999999999999998742 345688999999999 678887 899999999999999999988777776665
Q ss_pred C--CeEEEecCC-CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee
Q 010794 296 G--PTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 372 (501)
Q Consensus 296 ~--~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 372 (501)
. .+.++.|.+ ...+++++.|++|++|+++....+..+.+|.+.|++|+|+|+|++|++|+.||+|++||+..+ .+.
T Consensus 354 ~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~ 432 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLH 432 (524)
T ss_dssp SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTT
T ss_pred ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcc
Confidence 3 466788866 457888999999999999998888889999999999999999999999999999999998654 322
Q ss_pred eccc-----CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCeEEEEECCCC---CE
Q 010794 373 DLRE-----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSLAFSPTG---EY 443 (501)
Q Consensus 373 ~~~~-----~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~spdg---~~ 443 (501)
.++. +...+++++|+|++. ++ ... +.+++|+.. ++.++..+.+|..+|++|+|+|++ .+
T Consensus 433 ~~~~~~~~~~~~~v~~v~~sp~g~---------~~-~~~--~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~ 500 (524)
T 2j04_B 433 GIKNSSATQKSLRLWKWDYSIKDD---------KY-RID--SSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKC 500 (524)
T ss_dssp CC------CCCCEEEECBCCSSSC---------EE-EEC--CCCCCCC-------------CCCSCCCEEECCSTTTTTE
T ss_pred ccccCccceeeeEEEEeccCCCCC---------eE-Ecc--CCceecccccCCcceeeecCCCceEEEEECCCCCCccHH
Confidence 2211 112467899999875 22 222 234455443 467788899999999999999996 49
Q ss_pred EEEEeCCCcEEEEeCCC
Q 010794 444 LASGSLDKSMHIWSLKE 460 (501)
Q Consensus 444 lasgs~Dg~i~iw~~~~ 460 (501)
||+|+.||+|+||++..
T Consensus 501 lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 501 YAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp EEEECTTSEEEEEECSC
T ss_pred HHhhccCceEEEEEccc
Confidence 99999999999999864
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-36 Score=302.72 Aligned_cols=268 Identities=29% Similarity=0.541 Sum_probs=240.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeE
Q 010794 211 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 289 (501)
Q Consensus 211 ~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~ 289 (501)
+...|++++| ++++|++|+.||.|++|+... .....+.+|.++|++++| ++++|++|+.||+|++||+.+++...
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 4567888877 789999999999999999764 566788899999999999 67899999999999999999999999
Q ss_pred eeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcce---eeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q 010794 290 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI---KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 366 (501)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~---~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~ 366 (501)
.+..|...+.++.|.+ ..+++++.|+.|++|++.....+ ..+.+|...|.+++| ++++|++|+.||.|++||++
T Consensus 208 ~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 9999999999999975 48899999999999999887665 677899999999999 78899999999999999999
Q ss_pred CCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEE
Q 010794 367 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 367 ~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 446 (501)
+++.+..+..|...+.++.|++. ++++|+.||.|++||+++++++..+.+|...|++++| ++.+|++
T Consensus 285 ~~~~~~~~~~~~~~v~~~~~~~~-----------~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 285 TCEFVRTLNGHKRGIACLQYRDR-----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp TCCEEEEEECCSSCEEEEEEETT-----------EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEE
T ss_pred cCcEEEEEcCCCCcEEEEEeCCC-----------EEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEE
Confidence 99999999999999999998532 7899999999999999999999999999999999999 7889999
Q ss_pred EeCCCcEEEEeCCCCe---------eEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 447 GSLDKSMHIWSLKEGK---------IVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 447 gs~Dg~i~iw~~~~~~---------~~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|+.||.|++||+.++. .+..+.++ +.|++++| +|++|++|+.||+|+|||+.
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 9999999999997665 66676654 46899999 78899999999999999975
No 86
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=297.51 Aligned_cols=252 Identities=26% Similarity=0.420 Sum_probs=211.4
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC--
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 223 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~-- 223 (501)
+.++.+|...|++++|+|++++||+|+.||.|+||++.... ...... ...|...|++++|+++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~----~~~h~~~v~~~~~~~~~~ 68 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----------HKLIDT----LTGHEGPVWRVDWAHPKF 68 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-----------EEEEEE----ECCCSSCEEEEEECCGGG
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-----------ceeeeE----ecCCCCcEEEEEeCCCCC
Confidence 45788999999999999999999999999999999986321 111122 2345788999999987
Q ss_pred CCEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 224 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
+.+|++|+.||.|++|+.... ....+..|...|++++|+|+ +.+|++++.|++|++||+++....
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---------- 138 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT---------- 138 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC----------
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce----------
Confidence 999999999999999998754 45677889999999999999 999999999999999999765321
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-------------CCCEEEEEeCCCeEEEEeC
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-------------TGSLLASCSDDVTAKIWNM 365 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-------------~~~~l~s~s~Dg~i~iwd~ 365 (501)
....+.+|...|.+++|+| ++.+|++|+.||.|++||+
T Consensus 139 -----------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 139 -----------------------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 189 (379)
T ss_dssp -----------------------------CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEE
T ss_pred -----------------------------eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEe
Confidence 1123456888899999999 6999999999999999999
Q ss_pred CCCc----eeeecccCCCCEEEEEEcCC---CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-----EEEEeeCCCCCeE
Q 010794 366 KQDK----YVHDLREHSKEIYTIRWSPT---GSGTNNPNQQLILASASFDSTVKLWDVELGK-----LLYSLNGHREPVY 433 (501)
Q Consensus 366 ~~~~----~~~~~~~~~~~v~~i~~~p~---g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-----~~~~~~~h~~~v~ 433 (501)
+++. .+..+..|...|.+++|+|+ +. +|++++.||.|++||++.+. .+.....|...|+
T Consensus 190 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 260 (379)
T 3jrp_A 190 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS---------YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW 260 (379)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE---------EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEE
T ss_pred cCCCcceeeEEEEecccCcEeEEEECCCCCCCC---------eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEE
Confidence 7664 44667789999999999998 53 89999999999999998763 2223344888999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010794 434 SLAFSPTGEYLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 434 ~l~~spdg~~lasgs~Dg~i~iw~~~~ 460 (501)
+++|+|+|++|++++.||.|++|++..
T Consensus 261 ~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 261 RASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999999999999999999999874
No 87
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=281.60 Aligned_cols=294 Identities=24% Similarity=0.443 Sum_probs=233.9
Q ss_pred cCCCceEEccC--Ccc--ceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeE
Q 010794 141 IPNSDVTILEG--HTS--EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 216 (501)
Q Consensus 141 ~~~~~~~~l~~--H~~--~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 216 (501)
+|..+.++|.+ ..+ ..++|+||+++ +||+| .|++|+|||+.++... +.+. ...|...|+
T Consensus 9 ~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~-------------~~~~--~~~~~~~V~ 71 (318)
T 4ggc_A 9 IPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDIL-------------QLLQ--MEQPGEYIS 71 (318)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEE-------------EEEE--CCSTTCCEE
T ss_pred cCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEE-------------EEEE--ecCCCCeEE
Confidence 44444455542 222 25789999986 66665 5999999999876421 1111 224567899
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcc-eeEeeeec
Q 010794 217 TLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFH 294 (501)
Q Consensus 217 ~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~ 294 (501)
+++|+|++++|++|+.||.|++|+... .....+.+|...+.++.+ ++..|++|+.++.+++|+..... ....+..|
T Consensus 72 ~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 72 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 999999999999999999999999864 556678899998887655 56789999999999999987654 45667778
Q ss_pred cCCeEEEecC-CCceEEEecCCCeEEEEEcCCCcc----eeeecCCCCceeEEEEcCCCCE---EEEEeCCCeEEEEeCC
Q 010794 295 SGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRP----IKTFAGHQGEVNCVKWDPTGSL---LASCSDDVTAKIWNMK 366 (501)
Q Consensus 295 ~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~----~~~~~~h~~~v~~v~~~~~~~~---l~s~s~Dg~i~iwd~~ 366 (501)
...+..+.+. ....+++++.|+.|++|++..++. ......|.+.|.+++++|++.. +++++.+++|++||..
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 8888888775 456788999999999999987543 3445678889999999998764 3567889999999998
Q ss_pred CCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEE
Q 010794 367 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 367 ~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 446 (501)
........ .+...+..+.|+|.+. .+++++|+.|+.|++||+++++++.++.+|..+|++|+|+|+|++|||
T Consensus 230 ~~~~~~~~-~~~~~v~~~~~~~~~~-------~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 230 SGACLSAV-DAHSQVCSILWSPHYK-------ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp TCCEEEEE-ECSSCEEEEEEETTTT-------EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred cccccccc-cceeeeeeeeeccccc-------ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 87765543 4667889999999875 233445568999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEeCCCC
Q 010794 447 GSLDKSMHIWSLKEG 461 (501)
Q Consensus 447 gs~Dg~i~iw~~~~~ 461 (501)
||.||+|+|||+.+.
T Consensus 302 ~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 302 AAADETLRLWRCFEL 316 (318)
T ss_dssp EETTTEEEEECCSCC
T ss_pred EecCCeEEEEECCCC
Confidence 999999999998754
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-38 Score=312.09 Aligned_cols=300 Identities=12% Similarity=0.134 Sum_probs=239.5
Q ss_pred CCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEee-------------c---cccccCCCC
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-------------K---GRTNEKSKD 214 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~~ 214 (501)
.-..+|.+++|||||+++||||.|++|+ |...+.... .++..+..+... . .....+...
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~---gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDIN---CNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCY 87 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCS---SBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceec---CCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCc
Confidence 3457899999999999999999999999 755554332 222222222110 0 011134678
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCC-----CEEEEEecCCCCEEEEEecCCeEEEEeCCCcce--
Q 010794 215 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKG-----PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-- 287 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~-----~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~-- 287 (501)
|.+++|||+|.+|++++.||.|+||+..+ ....+. |.. .|.+++|||+|++|++|+.||+|++||+.++..
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 99999999999999999999999999665 455566 665 499999999999999999999999999998753
Q ss_pred -----eEee----eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcc---eeee-cCCCCceeEEEEcCCCCEEEEE
Q 010794 288 -----KQQF----EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP---IKTF-AGHQGEVNCVKWDPTGSLLASC 354 (501)
Q Consensus 288 -----~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~---~~~~-~~h~~~v~~v~~~~~~~~l~s~ 354 (501)
..++ ..|...|.+++|.++. +++++.|+++++|++..+.. ..++ .+|...|.+++|+ |+.||++
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa 242 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT 242 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEE
Confidence 4555 4456789999999888 99999999999999987763 3456 4888999999999 6899988
Q ss_pred eCCCeEEEEeCCCCceeeecccCCCCEEEEEE--cCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCe
Q 010794 355 SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW--SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPV 432 (501)
Q Consensus 355 s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~--~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v 432 (501)
+ +++|++||+.+++......+|...++.++| +|++. .|++++.||+ ++|...
T Consensus 243 ~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~---------~La~a~edG~-klw~~d--------------- 296 (588)
T 2j04_A 243 C-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKEST---------ILLMSNKTSY-KVLLED--------------- 296 (588)
T ss_dssp C-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCE---------EEEECSSCEE-EEEESS---------------
T ss_pred e-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCC---------EEEEEcCCCC-EEEeec---------------
Confidence 7 699999999988774434479999999999 88885 7899999999 999876
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEEC
Q 010794 433 YSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 433 ~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~ 490 (501)
.++|+|++..+++. |+++++|+...+. ...+.+...|++++|||||+.+|+++.
T Consensus 297 -~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 -ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp -SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred -cEEECCCceEEEEc--CCEEEEEECCCCc-eeeeccceEEEEEEECCCCCEEEEEEe
Confidence 26699999988875 9999999975544 445555456899999999999998863
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-36 Score=293.32 Aligned_cols=269 Identities=14% Similarity=0.193 Sum_probs=237.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCce----eEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeC-C
Q 010794 210 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDV-K 283 (501)
Q Consensus 210 ~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~----~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~-~ 283 (501)
+|...|++++|+|++.+|++|+.|+.|+||+..... ...+..|..+|++++|+|+++ +|++|+.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 467889999999999999999999999999976543 455668999999999999999 9999999999999999 8
Q ss_pred CcceeEeeee--ccCCeEEEecCCCceEEEecCCCeEEEEEcCC---------CcceeeecCCCCceeEEEEcCCCCEEE
Q 010794 284 TEEWKQQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---------NRPIKTFAGHQGEVNCVKWDPTGSLLA 352 (501)
Q Consensus 284 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---------~~~~~~~~~h~~~v~~v~~~~~~~~l~ 352 (501)
++.. ..+.. |...+.++.|.+...+++++.|+.|++|++.. .+++..+. |...|.+++|+|++ ++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EE
T ss_pred CCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EE
Confidence 7765 56667 88899999986677889999999999999987 77777766 88999999999987 99
Q ss_pred EEeCCCeEEEEeCCC-Cce--eeecccCCCCEEEEEEcC-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC------eEE
Q 010794 353 SCSDDVTAKIWNMKQ-DKY--VHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELG------KLL 422 (501)
Q Consensus 353 s~s~Dg~i~iwd~~~-~~~--~~~~~~~~~~v~~i~~~p-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------~~~ 422 (501)
+++.|+.|++||+++ +.. ......+...+.+++|+| ++. ++++|+.||.|++|++... +.+
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~---------~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE---------GYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC---------EEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC---------EEEEEecCCcEEEEEEcCCCcccccccc
Confidence 999999999999987 442 234456778999999999 875 7899999999999999876 777
Q ss_pred EEeeCCCC---------CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEEECC
Q 010794 423 YSLNGHRE---------PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 423 ~~~~~h~~---------~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~~~d 491 (501)
..+.+|.. +|++++|+|++++|++|+.||.|++||+.+++.+..+..+ ..|.+++ |+|++||+|+.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 88888865 9999999999999999999999999999999999888764 4588988 999999999999
Q ss_pred Ce
Q 010794 492 HT 493 (501)
Q Consensus 492 ~~ 493 (501)
|+
T Consensus 314 g~ 315 (342)
T 1yfq_A 314 DT 315 (342)
T ss_dssp TH
T ss_pred Cc
Confidence 98
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-35 Score=297.06 Aligned_cols=280 Identities=24% Similarity=0.442 Sum_probs=248.0
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
..+..+.+|...|.+++|+ +.+|++|+.||+|++||+.++.. ...+ ..|...|.+++|+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~-------------~~~~----~~h~~~v~~~~~~-- 208 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGEC-------------IHTL----YGHTSTVRCMHLH-- 208 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEE-------------EEEE----CCCSSCEEEEEEE--
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcE-------------EEEE----CCCCCcEEEEEec--
Confidence 4467889999999999997 67999999999999999976531 1122 2456789999995
Q ss_pred CCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEe
Q 010794 224 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (501)
+.++++|+.||.|++|+.. +.....+.+|..+|.+++| ++.+|++|+.|++|++||++++.....+..|...+.++.
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 286 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 286 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEE
Confidence 5789999999999999986 4566778899999999999 678999999999999999999999999999999999999
Q ss_pred cCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeccc---CCC
Q 010794 303 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---HSK 379 (501)
Q Consensus 303 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---~~~ 379 (501)
| +...+++++.|+.|++|++..++++..+.+|...+.++.++ +.+|++|+.||.|++||+++++.+..+.. |..
T Consensus 287 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 287 F-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp E-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred E-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 9 66778999999999999999999999999999999988874 67999999999999999999998888876 888
Q ss_pred CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-----eCCCCCeEEEEECCCCCEEEEEeCCCc--
Q 010794 380 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-----NGHREPVYSLAFSPTGEYLASGSLDKS-- 452 (501)
Q Consensus 380 ~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~spdg~~lasgs~Dg~-- 452 (501)
.|.+++|++. +|++|+.||.|++||+.+++.+..+ .+|...|++++|+|++.+||+|+.||+
T Consensus 364 ~v~~~~~~~~-----------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~ 432 (445)
T 2ovr_B 364 AVTCLQFNKN-----------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE 432 (445)
T ss_dssp CEEEEEECSS-----------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSC
T ss_pred CEEEEEECCC-----------EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCc
Confidence 9999999642 7999999999999999999998887 468889999999999999999999998
Q ss_pred --EEEEeCCC
Q 010794 453 --MHIWSLKE 460 (501)
Q Consensus 453 --i~iw~~~~ 460 (501)
|.|||+..
T Consensus 433 ~~l~v~df~~ 442 (445)
T 2ovr_B 433 TKLLVLDFDV 442 (445)
T ss_dssp CEEEEEECCC
T ss_pred cEEEEEECCC
Confidence 99999874
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-36 Score=296.96 Aligned_cols=276 Identities=14% Similarity=0.171 Sum_probs=216.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCC-------eEEEEECCCce-----------eEeecCCCCCEEEEEecCCCCEEEEE--
Q 010794 212 SKDVTTLDWNGEGTLLATGSYDG-------QARIWSTNGDL-----------KCTLSKHKGPIFSLKWNKKGDYLLTG-- 271 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~dg-------~i~iw~~~~~~-----------~~~~~~h~~~V~~l~~~~~~~~l~s~-- 271 (501)
..||++++|+|++++|++||.+. .|++|++.... ...+.+|...|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45899999999999999998643 59999975321 12467888888888765 4566655
Q ss_pred ---------ecCCeEEEEeCCCcceeEee----ee-----ccCCeEEEecCCCc-eE--EEecCCCeEEEEEcCCCccee
Q 010794 272 ---------SCDKTAIVWDVKTEEWKQQF----EF-----HSGPTLDVDWRNNV-SF--ATSSTDNMIYVCKIGENRPIK 330 (501)
Q Consensus 272 ---------s~D~~i~iwd~~~~~~~~~~----~~-----~~~~~~~~~~~~~~-~~--~~~~~d~~i~~~~~~~~~~~~ 330 (501)
+.|+++++|++.+......+ .. +...+..+.|.++. .+ ++++.|++|++|++.+..++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 45788999988654322111 11 12235567776543 33 345679999999999998888
Q ss_pred eecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC
Q 010794 331 TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD 408 (501)
Q Consensus 331 ~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d 408 (501)
.+. |.+.|.+++|+|+|++|++++.++ +++|+..++..+. ....|...+.+++|+|++. ++++++.|
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~---------~l~~~s~d 240 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDT---------VLIAASLK 240 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE---------EEEEEEES
T ss_pred EeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC---------EEEEEecC
Confidence 775 778899999999999999998654 6666666665543 3456788899999999986 78888877
Q ss_pred C----eEEEEeCCCCeE----EEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE-ec-CCCEEEEEE
Q 010794 409 S----TVKLWDVELGKL----LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY-TG-NGGIFEVCW 478 (501)
Q Consensus 409 g----~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~-~~-~~~i~~~~w 478 (501)
+ .+++|++..... ...+.+|..+|++++|||+|++||+|+.|++|+|||+.+++++.++ .+ ...|++++|
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE
Confidence 7 688999876653 3567889999999999999999999999999999999999998886 44 456999999
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010794 479 NKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 479 s~~g~~la~~~~d~~v~v~~~~ 500 (501)
||||++||+|+.|++|+||++.
T Consensus 321 Spdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 321 SPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp CTTSCEEEEEETTSEEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999999999984
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-35 Score=282.48 Aligned_cols=247 Identities=28% Similarity=0.558 Sum_probs=223.6
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEEecCCCeEEEEEc
Q 010794 245 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKI 323 (501)
Q Consensus 245 ~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~ 323 (501)
....+.+|..+|++++|+|++++|++|+.|++|++|++.++.....+..|...+.++.|.+ ...+++++.|+.|++|++
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 4457789999999999999999999999999999999999999999999999999999965 467889999999999999
Q ss_pred CCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEE
Q 010794 324 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA 403 (501)
Q Consensus 324 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~ 403 (501)
..+..+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|...+.+++|+|++. +|+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~ 165 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS---------LIV 165 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS---------EEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC---------EEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999886 789
Q ss_pred EEeCCCeEEEEeCCCCeEEEEee-CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCC----EEEEEE
Q 010794 404 SASFDSTVKLWDVELGKLLYSLN-GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGG----IFEVCW 478 (501)
Q Consensus 404 sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~----i~~~~w 478 (501)
+|+.||.|++||+++++.+..+. .+..+|..++|+|++++|++++.|+.|++||+.+++.+..+.++.. +.....
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 99999999999999998887764 4667899999999999999999999999999999999888865432 233334
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010794 479 NKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 479 s~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+++.+|++|+.|+.|+|||++
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETT
T ss_pred eCCCcEEEEECCCCEEEEEECC
Confidence 4678999999999999999975
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-35 Score=293.99 Aligned_cols=300 Identities=13% Similarity=0.050 Sum_probs=231.7
Q ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEecCCCC---CCCCCCCCCc------e---------EEE--------------
Q 010794 153 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGT---SNGGAQNGPL------N---------VLV-------------- 200 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~---~~~~~~~~~~------~---------~~~-------------- 200 (501)
..++++++|+|+|++|+++ .++.|++||+.++. .......... . ...
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999976665 57899999998876 2111000000 0 000
Q ss_pred --------EEeeccccccCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECC--C-ceeEeec--CCCCCEEEEEecCCCC
Q 010794 201 --------LKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTN--G-DLKCTLS--KHKGPIFSLKWNKKGD 266 (501)
Q Consensus 201 --------~~~~~~~~~~~~~~V~~~~~s~~~~~l-~sg~~dg~i~iw~~~--~-~~~~~~~--~h~~~V~~l~~~~~~~ 266 (501)
..........+...|++++|+|++++| ++|+.||.|+||+.. . .....+. .|...|++++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 000000112345579999999999996 899999999999976 3 4444554 6778999999999999
Q ss_pred EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC
Q 010794 267 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP 346 (501)
Q Consensus 267 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 346 (501)
+|++|+.|+.|++|++.++.... .++..+.+|...|.+++|+|
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~-------------------------------------~~~~~~~~h~~~v~~~~~sp 205 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEK-------------------------------------FTQEPILGHVSMLTDVHLIK 205 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSS-------------------------------------CCCCCSEECSSCEEEEEEEE
T ss_pred EEEEEeCCCcEEEEecCCccccc-------------------------------------ccceeeecccCceEEEEEcC
Confidence 99999999999999987654211 02235567899999999999
Q ss_pred C---CCEEEEEeCCCeEEEEeCCCCceeee-cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE
Q 010794 347 T---GSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL 422 (501)
Q Consensus 347 ~---~~~l~s~s~Dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~ 422 (501)
+ +++|++|+.|++|++||+.++..+.. +.+|...|.+++|+ ++. +|++|+.|+.|++||+.+++++
T Consensus 206 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~---------~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 206 DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY---------LLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT---------EEEEEESSSEEEEEETTTCCEE
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC---------EEEEEeCCCeEEEEECCCCcEe
Confidence 9 99999999999999999999888877 56899999999999 775 8999999999999999999988
Q ss_pred EEeeC-------------------------CCCCeEEEEECCCCCEEEEEe-CCCcEEEEeC--CCC---eeEEEEecCC
Q 010794 423 YSLNG-------------------------HREPVYSLAFSPTGEYLASGS-LDKSMHIWSL--KEG---KIVKTYTGNG 471 (501)
Q Consensus 423 ~~~~~-------------------------h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~--~~~---~~~~~~~~~~ 471 (501)
..+.. +...|.+|+|+|++++|++++ .|+.|++|++ .++ +.+..+..++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~ 355 (450)
T 2vdu_B 276 STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY 355 (450)
T ss_dssp EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS
T ss_pred eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC
Confidence 88763 235799999999999999999 8999999999 555 6677777778
Q ss_pred CEEEEEECCCCCEEEEEEC------CCeEEEEEee
Q 010794 472 GIFEVCWNKEGDKIAACFA------NHTVCVLDFR 500 (501)
Q Consensus 472 ~i~~~~ws~~g~~la~~~~------d~~v~v~~~~ 500 (501)
.+.+++|+|++.+++++.. +..|.||.++
T Consensus 356 ~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 356 NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8999999996544444343 4558888764
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=290.33 Aligned_cols=281 Identities=16% Similarity=0.295 Sum_probs=233.0
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCcee-Eee-------------cCCCCCEEEEEecC-CCCEEEEEec
Q 010794 210 EKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLK-CTL-------------SKHKGPIFSLKWNK-KGDYLLTGSC 273 (501)
Q Consensus 210 ~~~~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~-~~~-------------~~h~~~V~~l~~~~-~~~~l~s~s~ 273 (501)
.|...|++++|+| ++++|++|+.||.|++|+...... ..+ .+|..+|++++|+| ++.+|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 4678999999999 999999999999999999864321 111 25999999999999 7789999999
Q ss_pred CCeEEEEeCCCcceeEeeeeccCCeEEEecCC----CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC
Q 010794 274 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS 349 (501)
Q Consensus 274 D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~ 349 (501)
|++|++||+.++.....+. +...+..+.+.. ...+++++.++.|++|++..+..+..+.+|.+.|.+++|+|+++
T Consensus 121 d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCC
Confidence 9999999999988777766 455666666643 34788999999999999999999999999999999999999998
Q ss_pred -EEEEEeCCCeEEEEeCCCCc-eeeec---------------ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEE
Q 010794 350 -LLASCSDDVTAKIWNMKQDK-YVHDL---------------REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 412 (501)
Q Consensus 350 -~l~s~s~Dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~ 412 (501)
+|++|+.||.|++||+++.. .+..+ ..|...|.+++|+|++. +|++++.||.|+
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~~~~~dg~i~ 270 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL---------HLLTVGTDNRMR 270 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS---------EEEEEETTSCEE
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC---------EEEEecCCCeEE
Confidence 58999999999999997664 22322 56888999999999886 789999999999
Q ss_pred EEeCCCCeEEEEeeCCC-----CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEE
Q 010794 413 LWDVELGKLLYSLNGHR-----EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIA 486 (501)
Q Consensus 413 iwd~~~~~~~~~~~~h~-----~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la 486 (501)
+||+.+++....+.++. ..+........+..+++++.|+.|++|++.+++.+..+.++ ..|.+++|+|+|++||
T Consensus 271 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp EEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEE
Confidence 99999887655443321 12222222334566777788999999999999999988765 5699999999999999
Q ss_pred EEECCCeEEEEEee
Q 010794 487 ACFANHTVCVLDFR 500 (501)
Q Consensus 487 ~~~~d~~v~v~~~~ 500 (501)
+|+.||.|+|||++
T Consensus 351 s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 351 SGSRDCNILAWVPS 364 (408)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EECCCCeEEEEeCC
Confidence 99999999999986
No 95
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.6e-35 Score=312.27 Aligned_cols=244 Identities=26% Similarity=0.405 Sum_probs=213.6
Q ss_pred cccCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCC------ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEE
Q 010794 208 TNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNG------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 280 (501)
Q Consensus 208 ~~~~~~~V~~~~~s~~~-~~l~sg~~dg~i~iw~~~~------~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iw 280 (501)
..+|...|++++|++++ .+|+||+.|++|+||++.. .....+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 44678999999999864 7999999999999999753 2345688999999999999999999999999999999
Q ss_pred eCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeE
Q 010794 281 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 360 (501)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i 360 (501)
|+.++.. +..+.+|...|.+++|+|++++|++|+.|++|
T Consensus 458 d~~~~~~-----------------------------------------~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 458 DLAAGVS-----------------------------------------TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp ETTTTEE-----------------------------------------EEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred ECCCCcc-----------------------------------------eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 9977642 23456799999999999999999999999999
Q ss_pred EEEeCCCCceeee---cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEE
Q 010794 361 KIWNMKQDKYVHD---LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF 437 (501)
Q Consensus 361 ~iwd~~~~~~~~~---~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 437 (501)
+|||......... ...|...|.+++|+|++.. .+|++|+.|++|++||++++++...+.+|...|++++|
T Consensus 497 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-------~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~ 569 (694)
T 3dm0_A 497 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ-------PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV 569 (694)
T ss_dssp EEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS-------CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc-------ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 9999865543322 2468888999999998631 27899999999999999999999999999999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+|+|++|++|+.||+|++||+.+++.+..+..+..+.+++|+|++.+|+++. ++.|+|||++
T Consensus 570 spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 570 SPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp CTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETT
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECC
Confidence 9999999999999999999999999988888888899999999999888776 4569999975
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.8e-36 Score=300.74 Aligned_cols=264 Identities=20% Similarity=0.295 Sum_probs=202.4
Q ss_pred eEEccCCccceeEEEECC-CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 146 VTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp-~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
+..+.+|.+.|++|+|+| ++.+|+|||.||+|++||+.++.. ..+. ....+...+.+++|+|++
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~ 221 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL--------------RVFA-SSDTINIWFCSLDVSASS 221 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE--------------EEEE-CCSSCSCCCCCEEEETTT
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce--------------eEEe-ccCCCCccEEEEEECCCC
Confidence 345679999999999998 689999999999999999865321 1111 112234568899999999
Q ss_pred CEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec
Q 010794 225 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (501)
.+|++|+.||.|++|++.+.....+.+|...|++++|+|++. +|++|+.|++|++||+++.....
T Consensus 222 ~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-------------- 287 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-------------- 287 (435)
T ss_dssp TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS--------------
T ss_pred CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc--------------
Confidence 999999999999999998888888899999999999999886 67899999999999998754211
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCC----
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK---- 379 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~---- 379 (501)
.+....+|...|++++|+|+|++|++|+.||+|+|||+.++.....+..|..
T Consensus 288 ------------------------~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 288 ------------------------SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp ------------------------CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred ------------------------eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 1123357899999999999999999999999999999998877666554432
Q ss_pred --CEEEEEEcCCCCCC---CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CCCCCeEEE-EECCCCCEEEEEeCCCc
Q 010794 380 --EIYTIRWSPTGSGT---NNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GHREPVYSL-AFSPTGEYLASGSLDKS 452 (501)
Q Consensus 380 --~v~~i~~~p~g~~~---~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l-~~spdg~~lasgs~Dg~ 452 (501)
.+....|+|.+... ..++...+++++..++.|++||..+++.+..+. +|...|.++ +|||+|++||+|+ |+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~ 422 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYH 422 (435)
T ss_dssp SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSE
T ss_pred cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCc
Confidence 23344566655410 011111223333345689999999999988864 688889887 6999999999876 889
Q ss_pred EEEEeCCCCee
Q 010794 453 MHIWSLKEGKI 463 (501)
Q Consensus 453 i~iw~~~~~~~ 463 (501)
|+||++++|+.
T Consensus 423 i~iW~~~~gk~ 433 (435)
T 4e54_B 423 ILIWSQQEART 433 (435)
T ss_dssp EEECCCC----
T ss_pred EEEEECCcCee
Confidence 99999998865
No 97
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.7e-35 Score=285.34 Aligned_cols=241 Identities=20% Similarity=0.385 Sum_probs=213.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcce
Q 010794 211 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 287 (501)
Q Consensus 211 ~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 287 (501)
|..+|++++|+|++++|++|+.|+.|++|+.... ....+.+|..+|++++|+|++++|++++.|++|++||+.++++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 4678999999999999999999999999998765 6678889999999999999999999999999999999877643
Q ss_pred eEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 010794 288 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~ 367 (501)
... ..+.+|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 87 ~~~---------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 87 KPT---------------------------------------LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp EEE---------------------------------------EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred eee---------------------------------------EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC
Confidence 221 12346788899999999999999999999999999987
Q ss_pred Cce----eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeC------------------CCCeEEEEe
Q 010794 368 DKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV------------------ELGKLLYSL 425 (501)
Q Consensus 368 ~~~----~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~------------------~~~~~~~~~ 425 (501)
+.. ......|...+.+++|+|++. +|++|+.||.|++||+ ..++.+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 128 ENDWWVCKHIKKPIRSTVLSLDWHPNSV---------LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp TTTEEEEEEECTTCCSCEEEEEECTTSS---------EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred CCcceeeeeeecccCCCeeEEEEcCCCC---------EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 762 233356788999999999876 7899999999999995 467889999
Q ss_pred eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 426 NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 426 ~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..+. .+.+++|+|+|.+|++| .|+.|.+|+++
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEcc
Confidence 9999999999999999999999999999999999999988887654 69999999999988888 89999999986
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-35 Score=286.87 Aligned_cols=256 Identities=25% Similarity=0.398 Sum_probs=214.9
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCC--CcceeEeeeeccCCeEEEecC-C--CceEEEecCCCeEE
Q 010794 245 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK--TEEWKQQFEFHSGPTLDVDWR-N--NVSFATSSTDNMIY 319 (501)
Q Consensus 245 ~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~d~~i~ 319 (501)
....+.+|.++|++++|+|++++|++|+.|++|++||+. +......+..|..++.++.|. + ...+++++.|+.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 345678999999999999999999999999999999998 556677788899999999995 3 57889999999999
Q ss_pred EEEcCCCc--ceeeecCCCCceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--eeeecccCCCCEEEEEEcCCCCCC
Q 010794 320 VCKIGENR--PIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQDK--YVHDLREHSKEIYTIRWSPTGSGT 393 (501)
Q Consensus 320 ~~~~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~p~g~~~ 393 (501)
+|++..+. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.... ....+..|...|.+++|+|.....
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999886 77788899999999999999 9999999999999999998773 344566889999999999942100
Q ss_pred CC----CCCcEEEEEEeCCCeEEEEeCCCCe----EEEEeeCCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCCCe
Q 010794 394 NN----PNQQLILASASFDSTVKLWDVELGK----LLYSLNGHREPVYSLAFSPT---GEYLASGSLDKSMHIWSLKEGK 462 (501)
Q Consensus 394 ~~----~~~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~spd---g~~lasgs~Dg~i~iw~~~~~~ 462 (501)
.. .....+|++|+.||.|++||++.+. .+..+.+|..+|++++|+|+ +.+|++++.||.|++|++.++.
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 00 0001278999999999999997653 55678899999999999999 8999999999999999998863
Q ss_pred ---eEEEEe---cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 463 ---IVKTYT---GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 463 ---~~~~~~---~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
....+. ....+.+++|+|+|++||+++.||.|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 122221 34569999999999999999999999999986
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.8e-34 Score=280.56 Aligned_cols=273 Identities=15% Similarity=0.219 Sum_probs=217.1
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEE-EEEecCCeEEEEeCCCcce
Q 010794 209 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEW 287 (501)
Q Consensus 209 ~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~D~~i~iwd~~~~~~ 287 (501)
..|...|++++|+|+|++|++|+.++ ++||+......... .+...+..+++.++++.+ ++++.|++|++||+.+++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS-QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE-EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee-eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 34678899999999999999998775 78999875433222 222347778888888877 5788899999999999998
Q ss_pred eEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCC-cceeeecCCCCceeEEEEcCCCCEEEE--EeCCCeEEEEe
Q 010794 288 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLAS--CSDDVTAKIWN 364 (501)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s--~s~Dg~i~iwd 364 (501)
+..+. +..++.++.+..+..+++ .++.|++|++... +.+..+.. ....+++++ .+++. |+.||.|++||
T Consensus 94 ~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd 165 (355)
T 3vu4_A 94 VSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITK 165 (355)
T ss_dssp EEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEE
T ss_pred EEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEE
Confidence 88776 456888888877654443 4789999999887 66666554 444566777 56655 68999999999
Q ss_pred CCCCc----------------eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCe-EEEEeCCCCeEEEEee-
Q 010794 365 MKQDK----------------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST-VKLWDVELGKLLYSLN- 426 (501)
Q Consensus 365 ~~~~~----------------~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~- 426 (501)
+.++. .+..+.+|...|.+++|+|++. +|++|+.|++ |++||+++++++..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~---------~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 166 LQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD---------MVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp CCC------------------CCEEECCCSSCEEEEEECTTSS---------EEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred CCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC---------EEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 98765 2677889999999999999986 8999999998 9999999999999998
Q ss_pred C-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE--E--------------------Eec--CCCEEEEEECCC
Q 010794 427 G-HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK--T--------------------YTG--NGGIFEVCWNKE 481 (501)
Q Consensus 427 ~-h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~--~--------------------~~~--~~~i~~~~ws~~ 481 (501)
+ |..+|++++|+|+|++|++|+.|++|++|++.++.... . +.. ......++|+++
T Consensus 237 g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d 316 (355)
T 3vu4_A 237 GLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE 316 (355)
T ss_dssp TTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS
T ss_pred CCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC
Confidence 5 99999999999999999999999999999997653211 0 000 112356899999
Q ss_pred CCEEEEEECCCeEEEEEee
Q 010794 482 GDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 482 g~~la~~~~d~~v~v~~~~ 500 (501)
|+.|++++.||.+.+|++.
T Consensus 317 ~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 317 SSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp SEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEEE
Confidence 9999999999999999875
No 100
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7e-35 Score=286.44 Aligned_cols=246 Identities=19% Similarity=0.274 Sum_probs=202.1
Q ss_pred cCCccceeEEEECC-CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEE
Q 010794 150 EGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 228 (501)
Q Consensus 150 ~~H~~~V~~~~~sp-~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~ 228 (501)
.+|...|++++|+| ++.+|++|+.|+.|++||+.+.. . ..+.. ...+...|.+++|+|++.+|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-----------~---~~~~~-~~~~~~~v~~~~~~~~~~~l~ 179 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-----------I---QVFAK-TDSWDYWYCCVDVSVSRQMLA 179 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-----------E---EEEEC-CCCSSCCEEEEEEETTTTEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-----------e---EEEec-cCCCCCCeEEEEECCCCCEEE
Confidence 47999999999999 68999999999999999987421 1 11111 123457799999999999999
Q ss_pred EEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc
Q 010794 229 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 307 (501)
Q Consensus 229 sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (501)
+|+.|+.|++|+..+.....+.+|...|.+++|+|++. +|++|+.|++|++||+++....
T Consensus 180 ~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------- 240 (383)
T 3ei3_B 180 TGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK------------------- 240 (383)
T ss_dssp EEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-------------------
T ss_pred EECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-------------------
Confidence 99999999999998888888999999999999999998 9999999999999999864210
Q ss_pred eEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeecccCC--------
Q 010794 308 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-------- 378 (501)
Q Consensus 308 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-------- 378 (501)
...+..+ +|...|.+++|+| ++.+|++++.|+.|++||++++..+..+..|.
T Consensus 241 ------------------~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 241 ------------------NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp ------------------TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred ------------------cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccccc
Confidence 1112233 5888999999999 99999999999999999999887766665442
Q ss_pred ---------CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCeEEEEECCCCCEEEEE
Q 010794 379 ---------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSPTGEYLASG 447 (501)
Q Consensus 379 ---------~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spdg~~lasg 447 (501)
..+..++|+|++. + +|+.||.|++||+.+++.+..+.+ |...+..++|+|++++|++|
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~---------~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQ---------L--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTT---------T--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred ceEEeccCCCCceEEEecCCcc---------c--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe
Confidence 2333345555543 2 778999999999999999999987 45778888999999999999
Q ss_pred eCCCcEEEEeCCC
Q 010794 448 SLDKSMHIWSLKE 460 (501)
Q Consensus 448 s~Dg~i~iw~~~~ 460 (501)
+ ||.|+||++.+
T Consensus 371 s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 371 M-GFNILIWNRED 382 (383)
T ss_dssp E-TTEEEEEECC-
T ss_pred c-CCcEEEEecCC
Confidence 8 99999999864
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.3e-34 Score=277.57 Aligned_cols=248 Identities=19% Similarity=0.362 Sum_probs=215.5
Q ss_pred EeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc----ceeEeeeeccCCeEEEecCC---CceEEEecCCCeEE
Q 010794 247 CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFEFHSGPTLDVDWRN---NVSFATSSTDNMIY 319 (501)
Q Consensus 247 ~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~ 319 (501)
..+.+|.++|++++|+|++++|++|+.||+|++||+.++ .....+..|..++.++.|.+ ...+++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 356789999999999999999999999999999999876 45667778999999999975 67889999999999
Q ss_pred EEEcCCC---------cceeeecCCCCceeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeeecc-------------
Q 010794 320 VCKIGEN---------RPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQDKYVHDLR------------- 375 (501)
Q Consensus 320 ~~~~~~~---------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~i~iwd~~~~~~~~~~~------------- 375 (501)
+|++..+ +++..+.+|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999876 457788899999999999999 9999999999999999998877654433
Q ss_pred cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCCCCCeEEEEECCCC----CEEEEEeC
Q 010794 376 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGHREPVYSLAFSPTG----EYLASGSL 449 (501)
Q Consensus 376 ~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg----~~lasgs~ 449 (501)
.+...+.+++|+|+... ..+|++++.++.+.+|+...++. +..+.+|...|++++|+|++ ++|++|+.
T Consensus 165 ~~~~~~~~~~~~p~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFS------PEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp SCSCCCEEEEECCCSSS------CCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred CcccceeEEEeccCCCC------CcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 57778999999997210 12789999999999998887765 67788999999999999998 89999999
Q ss_pred CCcEEEEeCCCC----------------------------------------------eeEEEEecC-CCEEEEEECCCC
Q 010794 450 DKSMHIWSLKEG----------------------------------------------KIVKTYTGN-GGIFEVCWNKEG 482 (501)
Q Consensus 450 Dg~i~iw~~~~~----------------------------------------------~~~~~~~~~-~~i~~~~ws~~g 482 (501)
||.|++|++.++ +.+..+.++ ..|++++|+|+|
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 999999999875 455556554 469999999999
Q ss_pred CEEEEEECCCeEEEEEee
Q 010794 483 DKIAACFANHTVCVLDFR 500 (501)
Q Consensus 483 ~~la~~~~d~~v~v~~~~ 500 (501)
++||+|+.||.|+||++.
T Consensus 319 ~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 319 TILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp CCEEEEETTSCEEEEEEC
T ss_pred CEEEEecCCCcEEEEecC
Confidence 999999999999999985
No 102
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-36 Score=296.88 Aligned_cols=239 Identities=19% Similarity=0.282 Sum_probs=199.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCccee
Q 010794 212 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 288 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 288 (501)
..+|++++|+|++++|++|+.|+.|+||+... .....+.+|..+|++++|+|++++|++|+.|++|++||+.++..
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~- 89 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT- 89 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C-
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc-
Confidence 45799999999999999999999999999875 35567889999999999999999999999999999999876530
Q ss_pred EeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 010794 289 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 368 (501)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~ 368 (501)
..+...+.+|...|.+++|+|++++|++|+.|+.|++||++++
T Consensus 90 -------------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 90 -------------------------------------WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp -------------------------------------CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred -------------------------------------eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 1123455678999999999999999999999999999999887
Q ss_pred c---eeeeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC------------------CCeEEEEee
Q 010794 369 K---YVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE------------------LGKLLYSLN 426 (501)
Q Consensus 369 ~---~~~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~------------------~~~~~~~~~ 426 (501)
. ....+.. |...|.+++|+|++. +|++|+.|+.|++||+. .++++..+
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPNNV---------LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSS---------EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred ccceeeeEeecccCCCeEEEEEcCCCC---------EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 6 3666777 899999999999886 89999999999999985 35566677
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCee----EEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 427 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI----VKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 427 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~----~~~~~~~-~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
+|...|++++|+|++++|++|+.||.|++|++.+++. +..+..+ ..|.+++|+|+|++|++|+.++.+ +|+.
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 8999999999999999999999999999999999876 6666665 459999999999999999877655 6654
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=280.25 Aligned_cols=279 Identities=19% Similarity=0.323 Sum_probs=229.6
Q ss_pred ccCCCCeEEEEECCC---CCEEEEEeCCCeEEEEECCC--cee-EeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeC
Q 010794 209 NEKSKDVTTLDWNGE---GTLLATGSYDGQARIWSTNG--DLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 282 (501)
Q Consensus 209 ~~~~~~V~~~~~s~~---~~~l~sg~~dg~i~iw~~~~--~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~ 282 (501)
..|...|++++|+|+ |.+|++|+.||.|+||+... ... ..+.+|..+|++++|+|++++|++|+.|++|++||+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 346788999999999 69999999999999999864 333 578889999999999999999999999999999999
Q ss_pred CCcceeEeeeeccCCeEEEec--CCC-ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCe
Q 010794 283 KTEEWKQQFEFHSGPTLDVDW--RNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 359 (501)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~ 359 (501)
.++.... +..|..++.++.| ..+ ..+++++.|+.|++|++...+++..+..|. .+.++.+. ...+++++.++.
T Consensus 116 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 191 (368)
T 3mmy_A 116 SSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERG 191 (368)
T ss_dssp TTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGC
T ss_pred CCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCc
Confidence 9988665 5568889999998 544 568899999999999999999888888765 55566665 458889999999
Q ss_pred EEEEeCCCCceeeec--ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC---eEEEEeeCCCC----
Q 010794 360 AKIWNMKQDKYVHDL--REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG---KLLYSLNGHRE---- 430 (501)
Q Consensus 360 i~iwd~~~~~~~~~~--~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~h~~---- 430 (501)
+++|++......... ..+...+.++.+.+.... ....+++|+.||.|++|+++.. ..+..+.+|..
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN-----KPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS-----CEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred EEEEEeccccchhhhccccccCCCceEEEcccCCC-----CCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 999999876433221 123344555555554431 1224899999999999999987 56777888876
Q ss_pred --------CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEE
Q 010794 431 --------PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCV 496 (501)
Q Consensus 431 --------~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~d~~v~v 496 (501)
+|++++|+|++++|++|+.||.|++||+.+++.+..+.. ...|.+++|+|+|++||+|+.|+....
T Consensus 267 ~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp -CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred ccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 799999999999999999999999999999999988876 456999999999999999998875433
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=296.64 Aligned_cols=274 Identities=20% Similarity=0.379 Sum_probs=209.1
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCce------------eEeecCCC------------CCEEEEEecCCC-
Q 010794 211 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------------KCTLSKHK------------GPIFSLKWNKKG- 265 (501)
Q Consensus 211 ~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~------------~~~~~~h~------------~~V~~l~~~~~~- 265 (501)
+...|++++|+|+|++|++|+.||.|+||+..... ...+.+|. .+|++++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 45789999999999999999999999999976432 56788998 889999999998
Q ss_pred -CEEEEEecCCeEEEEeCCCcceeEeee---eccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeee-cCCCCcee
Q 010794 266 -DYLLTGSCDKTAIVWDVKTEEWKQQFE---FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVN 340 (501)
Q Consensus 266 -~~l~s~s~D~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~ 340 (501)
.+|++++.|++|++||+.++....... .+.+............+......+ +.. ...+...+ .+|...|.
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD----LMV-EASPRRIFANAHTYHIN 181 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE----EEE-EEEEEEEECSCCSSCCC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh----eee-eccceEEeccCCCcceE
Confidence 799999999999999997755332110 011100000000000000000000 000 01122333 68999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCC-Cceee-------ecccCCCCEEEEEEcCCC-CCCCCCCCcEEEEEEeCCCeE
Q 010794 341 CVKWDPTGSLLASCSDDVTAKIWNMKQ-DKYVH-------DLREHSKEIYTIRWSPTG-SGTNNPNQQLILASASFDSTV 411 (501)
Q Consensus 341 ~v~~~~~~~~l~s~s~Dg~i~iwd~~~-~~~~~-------~~~~~~~~v~~i~~~p~g-~~~~~~~~~~~l~sgs~dg~i 411 (501)
+++|+|++++|++| .|+.|++||+.+ +..+. .+..|...|.+++|+|++ . +|++|+.||.|
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~---------~l~s~~~dg~i 251 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN---------TFVYSSSKGTI 251 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT---------EEEEEETTSCE
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc---------EEEEEeCCCeE
Confidence 99999999999999 899999999984 44443 366899999999999987 4 89999999999
Q ss_pred EEEeCCCCeE----EEEeeCCCC------------CeEEEEECCCCCEEEEEeCCCcEEEEeCCC-CeeEEEEecCCC--
Q 010794 412 KLWDVELGKL----LYSLNGHRE------------PVYSLAFSPTGEYLASGSLDKSMHIWSLKE-GKIVKTYTGNGG-- 472 (501)
Q Consensus 412 ~iwd~~~~~~----~~~~~~h~~------------~v~~l~~spdg~~lasgs~Dg~i~iw~~~~-~~~~~~~~~~~~-- 472 (501)
++||+++++. +..+.+|.. .|++++|+|+|++|++++. +.|++||+.+ ++.+..+..+..
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 9999998886 678888876 8999999999999999999 9999999997 888888876543
Q ss_pred --------------EEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 473 --------------IFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 473 --------------i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++.++|+|+|++||+|+.||.|+|||++
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 3349999999999999999999999974
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.4e-35 Score=289.31 Aligned_cols=275 Identities=17% Similarity=0.250 Sum_probs=232.7
Q ss_pred eEEEEECCCCCEEE-EEeCCCeEEEEECCCc-----eeEeecCCCCCEEEEEecC-CCCEEEEEecCCeEEEEeCCCc--
Q 010794 215 VTTLDWNGEGTLLA-TGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTE-- 285 (501)
Q Consensus 215 V~~~~~s~~~~~l~-sg~~dg~i~iw~~~~~-----~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~D~~i~iwd~~~~-- 285 (501)
...++++|+...++ +|+.||.|+||+.... ....+.+|.++|++++|+| ++++|++|+.|++|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 44578888765444 5789999999997542 3345778999999999999 8999999999999999999887
Q ss_pred -----ceeEeeeeccCCeEEEecCCC--ceEEEecCCCeEEEEEcCCCcceeee--cCCCCceeEEEEcCCCCEEEEEeC
Q 010794 286 -----EWKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTF--AGHQGEVNCVKWDPTGSLLASCSD 356 (501)
Q Consensus 286 -----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~ 356 (501)
.....+..|...+.++.|.+. ..+++++.|+.|++|++..+..+..+ .+|...|.+++|+|++++|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 557788889999999999766 47899999999999999999999898 889999999999999999999999
Q ss_pred CCeEEEEeCCCCceeeec-ccCCCC-EEEEEEcCCCCCCCCCCCcEEEEEE---eCCCeEEEEeCCCCeE-EEEe-eCCC
Q 010794 357 DVTAKIWNMKQDKYVHDL-REHSKE-IYTIRWSPTGSGTNNPNQQLILASA---SFDSTVKLWDVELGKL-LYSL-NGHR 429 (501)
Q Consensus 357 Dg~i~iwd~~~~~~~~~~-~~~~~~-v~~i~~~p~g~~~~~~~~~~~l~sg---s~dg~i~iwd~~~~~~-~~~~-~~h~ 429 (501)
||.|++||+++++.+..+ ..|... +.++.|+|++. +|++| +.|+.|++||++++.. +... ..|.
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 267 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK---------ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS 267 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE---------EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc---------EEEEeccCCCCceEEEEcCccccCCceEEeccCC
Confidence 999999999999988888 677765 89999999875 78888 7899999999987654 2222 2467
Q ss_pred CCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCee----EEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 430 EPVYSLAFSPTGEYLAS-GSLDKSMHIWSLKEGKI----VKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 430 ~~v~~l~~spdg~~las-gs~Dg~i~iw~~~~~~~----~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
..|.+++|+|++++|++ |+.||.|++|++.+++. +..+.....+.+++|+|+|.++++ .++.+++|++.
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcC
Confidence 78999999999999975 55799999999998872 333444567999999999998775 56689999874
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=314.63 Aligned_cols=251 Identities=26% Similarity=0.415 Sum_probs=209.5
Q ss_pred EEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC--C
Q 010794 147 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE--G 224 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~--~ 224 (501)
.++.+|.++|++++|+|++++|++|+.||.|+||++..+. ...... ..+|..+|++++|+++ +
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-----------~~~~~~----l~~h~~~V~~l~~s~~~~~ 67 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----------HKLIDT----LTGHEGPVWRVDWAHPKFG 67 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-----------EEEEEE----ECCCSSCEEEEEECCTTSC
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-----------Ccccee----ccCCcCceEEEEecCCCCC
Confidence 5688999999999999999999999999999999986421 111122 2346788999999988 9
Q ss_pred CEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 225 TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
++|++|+.||.|++|+.... ....+.+|..+|++++|+|+ +++|++|+.||+|++||++++...
T Consensus 68 ~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~----------- 136 (753)
T 3jro_A 68 TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT----------- 136 (753)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-----------
T ss_pred CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-----------
Confidence 99999999999999998764 45677889999999999999 999999999999999999765311
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-------------CCCEEEEEeCCCeEEEEeCC
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-------------TGSLLASCSDDVTAKIWNMK 366 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-------------~~~~l~s~s~Dg~i~iwd~~ 366 (501)
....+.+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus 137 ----------------------------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 137 ----------------------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp ----------------------------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred ----------------------------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 1223457888899999999 58999999999999999998
Q ss_pred CC----ceeeecccCCCCEEEEEEcCC---CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-----EEEEeeCCCCCeEE
Q 010794 367 QD----KYVHDLREHSKEIYTIRWSPT---GSGTNNPNQQLILASASFDSTVKLWDVELGK-----LLYSLNGHREPVYS 434 (501)
Q Consensus 367 ~~----~~~~~~~~~~~~v~~i~~~p~---g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~ 434 (501)
++ .....+..|...|++++|+|+ +. +|++|+.||.|++||+.++. .+....+|...|++
T Consensus 189 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~---------~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 259 (753)
T 3jro_A 189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS---------YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR 259 (753)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSE---------EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCC
T ss_pred CCcccceeeeeecCCCCcEEEEEeccCCCCCC---------EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEE
Confidence 76 455677889999999999998 54 89999999999999998764 33344568889999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCC
Q 010794 435 LAFSPTGEYLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 435 l~~spdg~~lasgs~Dg~i~iw~~~~ 460 (501)
++|+|+|++|++|+.||.|++|++..
T Consensus 260 l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 260 ASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999999999999999999874
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.3e-34 Score=286.23 Aligned_cols=262 Identities=24% Similarity=0.482 Sum_probs=215.6
Q ss_pred EEccCCccceeEEEECCC-CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 147 TILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~-~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
..+.+|.+.|++++|+|+ +.+||+|+.||.|++|++............... .. ....|...|++++|+|++.
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~---~~----~~~~h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQP---DL----RLRGHQKEGYGLSWNPNLN 194 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCC---SE----EEECCSSCCCCEEECTTST
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCC---cE----EecCCCCCeEEEEeCCCCC
Confidence 456789999999999998 789999999999999999753221110000000 11 1224567899999999998
Q ss_pred -EEEEEeCCCeEEEEECCCc--------eeEeecCCCCCEEEEEecC-CCCEEEEEecCCeEEEEeCCCcceeEeeeecc
Q 010794 226 -LLATGSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 226 -~l~sg~~dg~i~iw~~~~~--------~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
+|++|+.||.|++|++... ....+.+|...|.+++|+| ++.+|++++.|++|++||++++..
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-------- 266 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-------- 266 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS--------
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC--------
Confidence 9999999999999998651 1345678999999999999 678999999999999999986521
Q ss_pred CCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEeCCC-Cceeee
Q 010794 296 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQ-DKYVHD 373 (501)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~i~iwd~~~-~~~~~~ 373 (501)
.+++..+.+|...|++++|+|++. +|++|+.||.|++||+++ ...+..
T Consensus 267 ------------------------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 267 ------------------------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp ------------------------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred ------------------------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 123345567889999999999987 689999999999999987 566788
Q ss_pred cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--------------CeEEEEeeCCCCCeEEEEECC
Q 010794 374 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--------------GKLLYSLNGHREPVYSLAFSP 439 (501)
Q Consensus 374 ~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--------------~~~~~~~~~h~~~v~~l~~sp 439 (501)
+..|...|.+++|+|++. .+|++++.||.|+|||+.. ...+..+.+|...|++++|+|
T Consensus 317 ~~~h~~~v~~i~~sp~~~--------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 317 FESHKDEIFQVQWSPHNE--------TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp EECCSSCEEEEEECSSCT--------TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS
T ss_pred eecCCCCEEEEEECCCCC--------CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC
Confidence 888999999999999875 2789999999999999986 367888899999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEeCCCC
Q 010794 440 TGE-YLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 440 dg~-~lasgs~Dg~i~iw~~~~~ 461 (501)
+++ +|++++.||.|+||++.++
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEECCCCEEEeEcccc
Confidence 999 8999999999999998754
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.9e-34 Score=281.28 Aligned_cols=247 Identities=25% Similarity=0.463 Sum_probs=205.1
Q ss_pred CCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEE
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 230 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg 230 (501)
.|...|++++|+|++++|++|+.||.|++|++.++.. +..+ ..|...|.+++| ++.+|++|
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~-------------~~~~----~~~~~~v~~~~~--~~~~l~~~ 192 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK-------------LRTM----AGHQARVGCLSW--NRHVLSSG 192 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------------EEEE----CCCSSCEEEEEE--ETTEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE-------------EEEe----cCCCCceEEEEE--CCCEEEEE
Confidence 3899999999999999999999999999999876531 1122 245678999999 56799999
Q ss_pred eCCCeEEEEECC--CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCce
Q 010794 231 SYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 308 (501)
Q Consensus 231 ~~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (501)
+.||.|++|+.. ......+.+|.+.|.+++|+|++.+|++|+.|++|++||++++..
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--------------------- 251 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP--------------------- 251 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE---------------------
T ss_pred cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc---------------------
Confidence 999999999986 345667889999999999999999999999999999999876532
Q ss_pred EEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCC-CEEEEEe--CCCeEEEEeCCCCceeeecccCCCCEEEEE
Q 010794 309 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTIR 385 (501)
Q Consensus 309 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 385 (501)
+..+.+|...|.+++|+|++ .++++|+ .|+.|++||+.+++.+..+. +...+.+++
T Consensus 252 --------------------~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~ 310 (401)
T 4aez_A 252 --------------------KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLI 310 (401)
T ss_dssp --------------------EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEE
T ss_pred --------------------cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEE
Confidence 23455688899999999977 4566655 79999999999998888775 567899999
Q ss_pred EcCCCCCCCCCCCcEEEEE--EeCCCeEEEEeCCCCeEE--EEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 386 WSPTGSGTNNPNQQLILAS--ASFDSTVKLWDVELGKLL--YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 386 ~~p~g~~~~~~~~~~~l~s--gs~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
|+|++. +|++ |+.||.|++||+.++... ..+.+|...|++++|+|+|++|++|+.||.|++|++.++
T Consensus 311 ~s~~~~---------~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 311 WSPHSK---------EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp ECSSSS---------EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ECCCCC---------eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 999986 5566 558999999999986554 457799999999999999999999999999999999998
Q ss_pred eeEEEE
Q 010794 462 KIVKTY 467 (501)
Q Consensus 462 ~~~~~~ 467 (501)
+.+...
T Consensus 382 ~~~~~~ 387 (401)
T 4aez_A 382 DHVKRP 387 (401)
T ss_dssp ------
T ss_pred cccccc
Confidence 876543
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-35 Score=284.23 Aligned_cols=263 Identities=10% Similarity=0.061 Sum_probs=205.3
Q ss_pred EECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q 010794 160 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 239 (501)
Q Consensus 160 ~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw 239 (501)
.+.+++.+|+||+.||+|++||+.++.... .+. ...|.++.|+|+ +++|+.|+.|++|
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~----------~~~---------~~~v~~~~~~~~---~~s~s~D~~i~~w 100 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTIT----------TIT---------TPNPRTGGEHPA---IISRGPCNRLLLL 100 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEE----------EEE---------EECCCTTCCCCS---EEEECSTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEE----------EEe---------cCCceeeeeCCc---eEEecCCCeEEEE
Confidence 455688999999999999999998764321 111 235777888888 9999999999999
Q ss_pred ECCCce----------eEe-ecCCCCCEEEEEecC--CCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCC
Q 010794 240 STNGDL----------KCT-LSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 306 (501)
Q Consensus 240 ~~~~~~----------~~~-~~~h~~~V~~l~~~~--~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (501)
+..+.. ... ..+|.++|.+++|+| ++++|++|+.|++|++||++++.....+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~--------------- 165 (343)
T 3lrv_A 101 YPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH--------------- 165 (343)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE---------------
T ss_pred EccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE---------------
Confidence 866432 222 236778999999999 9999999999999999999876542211
Q ss_pred ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-eeccc-CCCCEEEE
Q 010794 307 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV-HDLRE-HSKEIYTI 384 (501)
Q Consensus 307 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~-~~~~~-~~~~v~~i 384 (501)
...|...+.+++|+|++.+|++|+.||.|+|||+++++.+ ..+.. |...|.++
T Consensus 166 -------------------------~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 166 -------------------------SAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEV 220 (343)
T ss_dssp -------------------------CCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEE
T ss_pred -------------------------ecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEE
Confidence 0124557999999999999999999999999999999887 77887 99999999
Q ss_pred EEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC---CCCCeE--EEEECCCCCEEEEEeC-CCcEEEEeC
Q 010794 385 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG---HREPVY--SLAFSPTGEYLASGSL-DKSMHIWSL 458 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---h~~~v~--~l~~spdg~~lasgs~-Dg~i~iw~~ 458 (501)
+|+|++. +|++++ ++.|++||+++++.+..+.. |...+. +++|+|+|++|++++. |+.|+||++
T Consensus 221 ~fs~~g~---------~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 221 KFADNGY---------WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EECTTSS---------EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEeCCCC---------EEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 9999986 788888 55999999998876554443 334444 6999999999999998 999999999
Q ss_pred CCCeeEEEEecCCCEEEEEECC---CCCEEEEEECCCeEEEE
Q 010794 459 KEGKIVKTYTGNGGIFEVCWNK---EGDKIAACFANHTVCVL 497 (501)
Q Consensus 459 ~~~~~~~~~~~~~~i~~~~ws~---~g~~la~~~~d~~v~v~ 497 (501)
.++...... ..+..++|++ +++.|++++.|+.+.++
T Consensus 291 ~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 291 DKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp CTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred cccccceEe---cCceeEecCccccccceeEEEecCCceEEE
Confidence 765433222 3467788998 88899999999988776
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.3e-35 Score=287.61 Aligned_cols=286 Identities=18% Similarity=0.310 Sum_probs=235.0
Q ss_pred ceeEEEECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-CCCEEEEEeC
Q 010794 155 EVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSY 232 (501)
Q Consensus 155 ~V~~~~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-~~~~l~sg~~ 232 (501)
....++++|+.. ++++|+.||.|+||++....... .......+|...|++++|+| ++.+|++|+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-------------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~ 102 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-------------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSE 102 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-------------TTCCCBCCCSSCEEEEEECTTCTTEEEEEET
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-------------CCCceEecCCCCEEEEEeCCCCCCEEEEEeC
Confidence 455789999875 45578999999999986432110 00112235678999999999 9999999999
Q ss_pred CCeEEEEECCC--------ceeEeecCCCCCEEEEEecCCC-CEEEEEecCCeEEEEeCCCcceeEee--eeccCCeEEE
Q 010794 233 DGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF--EFHSGPTLDV 301 (501)
Q Consensus 233 dg~i~iw~~~~--------~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~--~~~~~~~~~~ 301 (501)
||.|+||+... .....+.+|...|++++|+|++ ++|++|+.|++|++||+.+++....+ ..|...+.++
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence 99999999764 3456788999999999999998 69999999999999999999988888 7789999999
Q ss_pred ecCC-CceEEEecCCCeEEEEEcCCCcceeee-cCCCCc-eeEEEEcCCCCEEEEE---eCCCeEEEEeCCCCce-eeec
Q 010794 302 DWRN-NVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGE-VNCVKWDPTGSLLASC---SDDVTAKIWNMKQDKY-VHDL 374 (501)
Q Consensus 302 ~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~-v~~v~~~~~~~~l~s~---s~Dg~i~iwd~~~~~~-~~~~ 374 (501)
.|.+ ...+++++.|+.|++|++..+..+..+ .+|.+. +.++.|+|++.+|++| +.|+.|++||+++... +...
T Consensus 183 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 183 DWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred EECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE
Confidence 9974 457889999999999999999988888 788876 8999999999999999 7999999999988654 2222
Q ss_pred c-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeC--CCCCeEEEEECCCCCEEEEEeCC
Q 010794 375 R-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNG--HREPVYSLAFSPTGEYLASGSLD 450 (501)
Q Consensus 375 ~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~--h~~~v~~l~~spdg~~lasgs~D 450 (501)
. .+...+.+++|+|++. .++++|+.||.|++||+.+++. +..+.. |..+|++++|+|++.++++ .+
T Consensus 263 ~~~~~~~v~~~~~s~~~~--------~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~ 332 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTN--------IVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KC 332 (402)
T ss_dssp ECCCCSSCEEEEEETTTT--------EEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GT
T ss_pred eccCCCceeEEEEcCCCC--------EEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cc
Confidence 2 4667899999999986 3445677899999999998773 444433 5589999999999998875 56
Q ss_pred CcEEEEeCCCCee
Q 010794 451 KSMHIWSLKEGKI 463 (501)
Q Consensus 451 g~i~iw~~~~~~~ 463 (501)
+.+++|++.++.+
T Consensus 333 ~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 333 EIARFYKLHERKC 345 (402)
T ss_dssp EEEEEEEEETTEE
T ss_pred eeEEEEEcCCCcE
Confidence 7999999988765
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.2e-34 Score=278.77 Aligned_cols=279 Identities=11% Similarity=0.159 Sum_probs=210.0
Q ss_pred eEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 146 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 146 ~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
+..+.+|...|++++|+|||++|++|+.|+ ++||++.++.. .... . ...+..++|.+++.
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~-----------~~~~----~----~~~~~~~~~~~~~~ 71 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH-----------IMSQ----E----MRHLSKVRMLHRTN 71 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE-----------EEEE----E----CSCCCEEEECTTSS
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcce-----------eeee----e----cCCeEEEEEcCCCC
Confidence 345678999999999999999999998775 78999764321 1101 1 12477888888888
Q ss_pred EE-EEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc-ceeEeeeeccCCeEEEe
Q 010794 226 LL-ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 226 ~l-~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~ 302 (501)
++ ++|+.|+.|+|||... .....+. |..+|.+++|+++. ++++ .|++|++||+.++ +....+.. ...+.++.
T Consensus 72 ~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s 146 (355)
T 3vu4_A 72 YVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFS 146 (355)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEE
T ss_pred EEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEE
Confidence 77 5678889999999864 4444554 77799999999864 4444 4889999999987 55555544 22233333
Q ss_pred cCCCceEEE-ecCCCeEEEEEcCCCc---------------c-eeeecCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEe
Q 010794 303 WRNNVSFAT-SSTDNMIYVCKIGENR---------------P-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-AKIWN 364 (501)
Q Consensus 303 ~~~~~~~~~-~~~d~~i~~~~~~~~~---------------~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~-i~iwd 364 (501)
+ ...+++ ++.++.|++|++.... + +..+.+|.+.|.+++|+|+|++||+|+.|++ |+|||
T Consensus 147 ~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 147 N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFK 224 (355)
T ss_dssp T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEE
T ss_pred c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3 333333 6889999999998754 3 7788999999999999999999999999998 99999
Q ss_pred CCCCceeeecc-c-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEe---------------
Q 010794 365 MKQDKYVHDLR-E-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSL--------------- 425 (501)
Q Consensus 365 ~~~~~~~~~~~-~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~--------------- 425 (501)
+++++.+..+. + |...|++++|+|++. +|++|+.|++|++||+..+.. ...+
T Consensus 225 ~~~~~~~~~~~~g~h~~~v~~~~~s~~~~---------~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (355)
T 3vu4_A 225 TEDGVLVREFRRGLDRADVVDMKWSTDGS---------KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSL 295 (355)
T ss_dssp TTTCCEEEEEECTTCCSCEEEEEECTTSC---------EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCS
T ss_pred CCCCcEEEEEEcCCCCCcEEEEEECCCCC---------EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccce
Confidence 99999999998 5 999999999999986 899999999999999975421 1111
Q ss_pred -----e-CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010794 426 -----N-GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 426 -----~-~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 460 (501)
. .+..+...++|+|+|++|++++.||.+++|++..
T Consensus 296 ~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 296 CNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred eEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 1 1122346799999999999999999999998754
No 112
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-34 Score=281.08 Aligned_cols=266 Identities=20% Similarity=0.330 Sum_probs=210.4
Q ss_pred CccceeEEEECCC----CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-CCCE
Q 010794 152 HTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTL 226 (501)
Q Consensus 152 H~~~V~~~~~sp~----~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-~~~~ 226 (501)
|...|++++|+|+ +.+|++|+.||.|++||+.++.. +..+ ..|...|.+++|+| ++.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-------------~~~~----~~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-------------IKHY----VGHGNAINELKFHPRDPNL 130 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-------------EEEE----ESCCSCEEEEEECSSCTTE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-------------eeee----cCCCCcEEEEEECCCCCCE
Confidence 6688999999999 67999999999999999876531 1112 23577899999999 9999
Q ss_pred EEEEeCCCeEEEEECCC-ceeEee---cCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEe
Q 010794 227 LATGSYDGQARIWSTNG-DLKCTL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 227 l~sg~~dg~i~iw~~~~-~~~~~~---~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (501)
|++|+.||.|++|+... .....+ ..|...|++++|+|++++|++++.|+.|++||+++++....+.... .
T Consensus 131 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~ 204 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY------D 204 (366)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHH------T
T ss_pred EEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeE------E
Confidence 99999999999999875 444455 6899999999999999999999999999999999876544332210 0
Q ss_pred cCCCce-EEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-----------
Q 010794 303 WRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY----------- 370 (501)
Q Consensus 303 ~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~----------- 370 (501)
+.+... +.... . . ..........+|...|.+++|+ +.+|++++.||.|++||+.+...
T Consensus 205 ~~~~~~~~~~~~----~---~-~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 205 YNPNKTNRPFIS----Q---K-IHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp CCGGGCSSCCCC----E---E-ECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred ecCCCCcccccc----e---e-eccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence 100000 00000 0 0 0111234456799999999998 77999999999999999887644
Q ss_pred ---eeecccCCCCEEEEEEcCC--CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe----EEEEeeCC--CCCeEEEEECC
Q 010794 371 ---VHDLREHSKEIYTIRWSPT--GSGTNNPNQQLILASASFDSTVKLWDVELGK----LLYSLNGH--REPVYSLAFSP 439 (501)
Q Consensus 371 ---~~~~~~~~~~v~~i~~~p~--g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h--~~~v~~l~~sp 439 (501)
+..+..|...+.+++|+|+ +. +|++|+.||.|++||+.+++ ....+.+| ..+|++++|+|
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 275 VTILGRFDYSQCDIWYMRFSMDFWQK---------MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp EEEEEEEECSSCCSSCCCCEECTTSS---------EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred hheeccccccCCcEEEEEEcCCCCCc---------EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC
Confidence 6667778888999999998 65 89999999999999999875 45577777 78999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q 010794 440 TGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 440 dg~~lasgs~Dg~i~iw~~~ 459 (501)
++++|++|+.||.|++||+.
T Consensus 346 ~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 346 DSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TSSEEEEEETTSEEEEEEC-
T ss_pred CCCeEEEEeCCCEEEEEEec
Confidence 99999999999999999985
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.8e-32 Score=273.69 Aligned_cols=277 Identities=13% Similarity=0.105 Sum_probs=237.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCc-eeE-----eecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcc
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKC-----TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 286 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~-----~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~ 286 (501)
..+.+++|+|++.++++++.++.|++|+.... ... .+.+|.+.|.+++|+|++..+++++.|++|++||+.+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 34668999998888888888999999998743 333 345789999999999999999999999999999999999
Q ss_pred eeEeeeeccCCeEEEecCCC--ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEe--------C
Q 010794 287 WKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--------D 356 (501)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--------~ 356 (501)
....+..+...+..+.|.++ ..+++++.++.|++|++..++.+..+..+ ..+.+++|+|++++|++++ .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccC
Confidence 88888888888888888644 34466678999999999988887777654 4589999999999999888 5
Q ss_pred CCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEE
Q 010794 357 DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA 436 (501)
Q Consensus 357 Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 436 (501)
||.|++||+.+++.+..+ .+...+..++|+|++. .++++++.++.|++||+.+++.+..+. +...+.+++
T Consensus 282 dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~--------~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~ 351 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTEN--------KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIA 351 (433)
T ss_dssp CEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTT--------EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEE
T ss_pred CCeEEEEECCCCcEEeec-cCCCCcceEEECCCCC--------EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEE
Confidence 899999999988776654 4456788999999875 467888999999999999999888876 667899999
Q ss_pred ECCCCCEEEEEeC---------------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010794 437 FSPTGEYLASGSL---------------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 500 (501)
Q Consensus 437 ~spdg~~lasgs~---------------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~-d~~v~v~~~~ 500 (501)
|+|+|++|++++. ||.|++||+.+++.+..+.....+.+++|+|+|++|++++. |+.|.||++.
T Consensus 352 ~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 352 LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 9999999988876 57999999999999998888778999999999999998875 9999999975
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-33 Score=281.21 Aligned_cols=246 Identities=24% Similarity=0.439 Sum_probs=213.5
Q ss_pred EeecCCCCCEEEEEecCC-CCEEEEEecCCeEEEEeCCC----------cceeEeeeeccCCeEEEecCCC-c-eEEEec
Q 010794 247 CTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKT----------EEWKQQFEFHSGPTLDVDWRNN-V-SFATSS 313 (501)
Q Consensus 247 ~~~~~h~~~V~~l~~~~~-~~~l~s~s~D~~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 313 (501)
.....|.++|++++|+|+ +.+|++++.||.|++||+.+ ......+..|...+.++.|.+. . .+++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345679999999999997 67899999999999999986 5667778889999999999754 3 789999
Q ss_pred CCCeEEEEEcCCCcc-------eeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceeeecccCCCCEE
Q 010794 314 TDNMIYVCKIGENRP-------IKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQD---KYVHDLREHSKEIY 382 (501)
Q Consensus 314 ~d~~i~~~~~~~~~~-------~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~---~~~~~~~~~~~~v~ 382 (501)
.|+.|++|++..... ...+.+|...|.+++|+| ++.+|++++.||.|++||+++. +.+..+..|...|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987322 456778999999999999 6789999999999999999977 56777788999999
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCC
Q 010794 383 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~ 460 (501)
+++|+|++. .+|++|+.||.|++||+++ +..+..+.+|...|++++|+|++. +|++++.|+.|+||++..
T Consensus 282 ~i~~~p~~~--------~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 282 CLSFNPYSE--------FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEECSSCT--------TEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEeCCCCC--------CEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 999999875 3789999999999999997 567888999999999999999995 699999999999999986
Q ss_pred --------------CeeEEEEecCC-CEEEEEECCCCC-EEEEEECCCeEEEEEee
Q 010794 461 --------------GKIVKTYTGNG-GIFEVCWNKEGD-KIAACFANHTVCVLDFR 500 (501)
Q Consensus 461 --------------~~~~~~~~~~~-~i~~~~ws~~g~-~la~~~~d~~v~v~~~~ 500 (501)
..++..+.++. .|.+++|+|++. +||+++.|+.|.||++.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 24555655544 599999999999 99999999999999975
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-32 Score=266.56 Aligned_cols=245 Identities=20% Similarity=0.311 Sum_probs=222.4
Q ss_pred eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEEecCCCeEEEEEcC
Q 010794 246 KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIG 324 (501)
Q Consensus 246 ~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~ 324 (501)
...+.+|.++|++++|+|++++|++|+.|+.|++||+.+++....+..|...+.++.|.+ ...+++++.|+.|++|++.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 346789999999999999999999999999999999999999999999999999999975 5678899999999999999
Q ss_pred CCcceeeecCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce-----------eeecccCCC--CEEEEEE
Q 010794 325 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-----VTAKIWNMKQDKY-----------VHDLREHSK--EIYTIRW 386 (501)
Q Consensus 325 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D-----g~i~iwd~~~~~~-----------~~~~~~~~~--~v~~i~~ 386 (501)
.++.+..+. |...+.+++|+|++++|++++.+ |.|++||+..... +..+..|.. .+.+++|
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999888887 88899999999999999999999 9999999876542 333444555 8999999
Q ss_pred cCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010794 387 SPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 465 (501)
Q Consensus 387 ~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 465 (501)
+|++. +|++++.||.|++||+++ +..+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 184 ~~~~~---------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 184 STKGK---------YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CGGGC---------EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cCCCC---------EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 99886 789999999999999998 78889999999999999999999999999999999999999999999
Q ss_pred EEecCCCEEEEEECCCCCEEEEEECCC--------------eEEEEEee
Q 010794 466 TYTGNGGIFEVCWNKEGDKIAACFANH--------------TVCVLDFR 500 (501)
Q Consensus 466 ~~~~~~~i~~~~ws~~g~~la~~~~d~--------------~v~v~~~~ 500 (501)
.+.....+..++|+|+|+++++++.++ .+.+||++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 255 KYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred eecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 998888899999999999999999988 78888863
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-34 Score=303.97 Aligned_cols=253 Identities=25% Similarity=0.441 Sum_probs=209.1
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---ceeEeecCCCCCEEEEEecCC--CCEEEEEecCCeEEEEeCC
Q 010794 209 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVK 283 (501)
Q Consensus 209 ~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~D~~i~iwd~~ 283 (501)
.+|...|++++|+|++++|++|+.||.|+||+..+ .....+.+|.++|++++|+|+ +++|++|+.||+|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 35678999999999999999999999999999753 345678899999999999988 8999999999999999987
Q ss_pred CcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC--CCEEEEEeCCCeEE
Q 010794 284 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAK 361 (501)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~i~ 361 (501)
++.+. .+..+.+|...|.+++|+|+ +.+|++|+.||.|+
T Consensus 86 ~~~~~---------------------------------------~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 86 NGRWS---------------------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp TTEEE---------------------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred CCccc---------------------------------------ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 65421 23345678999999999999 99999999999999
Q ss_pred EEeCCCCc--eeeecccCCCCEEEEEEcCCCCCCCC----CCCcEEEEEEeCCCeEEEEeCCCC----eEEEEeeCCCCC
Q 010794 362 IWNMKQDK--YVHDLREHSKEIYTIRWSPTGSGTNN----PNQQLILASASFDSTVKLWDVELG----KLLYSLNGHREP 431 (501)
Q Consensus 362 iwd~~~~~--~~~~~~~~~~~v~~i~~~p~g~~~~~----~~~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~~ 431 (501)
+||++++. ....+..|...|.+++|+|....... .....+|++|+.||.|++||++++ .....+.+|..+
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 99998773 34456788999999999995210000 001126899999999999999876 667788999999
Q ss_pred eEEEEECCC---CCEEEEEeCCCcEEEEeCCCCee-----EEE-EecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 432 VYSLAFSPT---GEYLASGSLDKSMHIWSLKEGKI-----VKT-YTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 432 v~~l~~spd---g~~lasgs~Dg~i~iw~~~~~~~-----~~~-~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|++++|+|+ +.+|++|+.||.|++|++.++.. +.. ......|++++|+|+|++|++|+.||.|+||+++
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 999999999 89999999999999999988631 111 1234568999999999999999999999999975
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.6e-34 Score=281.59 Aligned_cols=233 Identities=13% Similarity=0.141 Sum_probs=164.6
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCce------eEeecCCCCCEEEEEecC--------CCCEEEEEecCCeEEEE
Q 010794 215 VTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHKGPIFSLKWNK--------KGDYLLTGSCDKTAIVW 280 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~------~~~~~~h~~~V~~l~~~~--------~~~~l~s~s~D~~i~iw 280 (501)
+....+++++.+|++|+.|++|+||+..... ...+.+|.+.|++|+|+| ++++|+||+.|++|+||
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 3444555677899999999999999976542 224679999999999998 78899999999999999
Q ss_pred eCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCC-EEEEEeCCCe
Q 010794 281 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVT 359 (501)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~ 359 (501)
|+.++.. +..+.+|...+.+++|+|++. +|++|+.||+
T Consensus 172 d~~~~~~-----------------------------------------~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 172 RLTDEGP-----------------------------------------ILAGYPLSSPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp EEETTEE-----------------------------------------EEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred ECCCCce-----------------------------------------eeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence 9876532 223445778899999999874 7999999999
Q ss_pred EEEEeCCCCceeeec-------------------------ccCCCCEEEEEEc-CCCCCCCCCCCcEEEEEEeCCCeEEE
Q 010794 360 AKIWNMKQDKYVHDL-------------------------REHSKEIYTIRWS-PTGSGTNNPNQQLILASASFDSTVKL 413 (501)
Q Consensus 360 i~iwd~~~~~~~~~~-------------------------~~~~~~v~~i~~~-p~g~~~~~~~~~~~l~sgs~dg~i~i 413 (501)
|++||+++++..... ..|...+.++.|+ |++. .|++++.|+++++
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~---------~l~s~s~d~~i~v 281 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS---------GILAMCKSGAWLR 281 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTC---------EEEEECTTSEEEE
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCC---------EEEEEeCCCCEEE
Confidence 999999876543221 2455667778876 5664 7899999999999
Q ss_pred EeCCCCeEEEEeeCCCCCeEEEEECC--------------------CCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cCCC
Q 010794 414 WDVELGKLLYSLNGHREPVYSLAFSP--------------------TGEYLASGSLDKSMHIWSLKEGKIVKTYT-GNGG 472 (501)
Q Consensus 414 wd~~~~~~~~~~~~h~~~v~~l~~sp--------------------dg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~~~ 472 (501)
||+..+.....+..|...+..+.++| ++.++++|+.||+|++||+.+++.+..+. +...
T Consensus 282 wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~ 361 (393)
T 4gq1_A 282 WNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP 361 (393)
T ss_dssp EEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC
T ss_pred EECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc
Confidence 99998877776666655555444433 33467888999999999999988766554 4567
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 473 IFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 473 i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
|.+++|||||++||+++.+| +.+|.
T Consensus 362 V~svafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 362 IVDFCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp EEEEEECTTSSEEEEEESSE-EEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 99999999999999998776 54444
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.7e-34 Score=279.28 Aligned_cols=282 Identities=13% Similarity=0.102 Sum_probs=185.7
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC-----
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG----- 222 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~----- 222 (501)
....|...+....+++++.+|++|+.|++|+|||+.++.. ..........+|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~------------~~~~~~~~~~gH~~~v~~v~~~p~~~~~ 151 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI------------ITQHVLGGKSGHHNFVNDIDIADVYSAD 151 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEE------------EEEEEECTTTSCSSCEEEEEEEEEECTT
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc------------ceeeeecccCCCCCceEEEEEccccccc
Confidence 3445666677777777889999999999999999876531 11122234556789999999997
Q ss_pred ---CCCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCC-EEEEEecCCeEEEEeCCCcceeEeeeeccCC
Q 010794 223 ---EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 297 (501)
Q Consensus 223 ---~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 297 (501)
|+++|+||+.|++|+|||+. +.....+..|..+|.+++|+|++. +|++|+.|++|++||++++........+...
T Consensus 152 ~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 152 NRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp CSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred cCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 89999999999999999975 445566778999999999999874 7999999999999999987655443322211
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeeeccc
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 376 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 376 (501)
.... +.-.............+|...+.++.|+ |+++.|++++.|+++++||+..+.....+..
T Consensus 232 ~~~~----------------~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~ 295 (393)
T 4gq1_A 232 KNPW----------------LLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD 295 (393)
T ss_dssp SCCC----------------SEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------
T ss_pred ccce----------------EEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee
Confidence 1000 0001111111122345788899999987 8999999999999999999998887777777
Q ss_pred CCCCEEEEEEcCCCCC-----------CCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEE
Q 010794 377 HSKEIYTIRWSPTGSG-----------TNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA 445 (501)
Q Consensus 377 ~~~~v~~i~~~p~g~~-----------~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la 445 (501)
|...+..+.+.|++.. ...+....++++|+.||.|+|||+.++..+..+.+|..+|++|+|||||++||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 296 STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp --------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEE
T ss_pred ecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 7777777666665321 01123456788999999999999999998888888999999999999999999
Q ss_pred EEeCCCcEEEEeC
Q 010794 446 SGSLDKSMHIWSL 458 (501)
Q Consensus 446 sgs~Dg~i~iw~~ 458 (501)
+++.+| +.+|.+
T Consensus 376 ~as~~G-v~lvrL 387 (393)
T 4gq1_A 376 IATEGS-VLLTRL 387 (393)
T ss_dssp EEESSE-EEEEEE
T ss_pred EEeCCC-eEEEEE
Confidence 999776 555544
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=280.31 Aligned_cols=257 Identities=14% Similarity=0.087 Sum_probs=210.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 212 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
...|.+++|+|||+++||++.|++|+ +. .....+.+|...|++++|+|+| .++++.+|+.+..... .+
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~--~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~-~~ 82 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QP--KYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLL-NS 82 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EE--CCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSS-TT
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cc--cccceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEe-ec
Confidence 46799999999999999999999999 53 3334557999999999999998 5667666665433221 22
Q ss_pred eeccCCeEEEecCCC-ceEEEecCCCeEEEEEcCCCcceeeecCCCC-----ceeEEEEcCCCCEEEEEeCCCeEEEEeC
Q 010794 292 EFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQG-----EVNCVKWDPTGSLLASCSDDVTAKIWNM 365 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~s~Dg~i~iwd~ 365 (501)
.+...+.++.|.++ ..+++++.||.+++|+... .+..+. |.. .+.+++|||||++||+|+.||+|+|||+
T Consensus 83 -~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 -QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp -SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred -CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 33678999999754 5689999999999999544 555666 665 4999999999999999999999999999
Q ss_pred CCCce-------eeec----ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEe-eCCCC
Q 010794 366 KQDKY-------VHDL----REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSL-NGHRE 430 (501)
Q Consensus 366 ~~~~~-------~~~~----~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~-~~h~~ 430 (501)
.++.. +.++ .+|...|.+++|+|+| +++++.|++|++||+..+.. ..++ .+|..
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-----------Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~ 227 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-----------LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR 227 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-----------EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc-----------EEEEeCCCeEEEEECCCCccccceeeecccccC
Confidence 98753 4565 5677899999999974 67788899999999987773 3566 47889
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE-EEEecCCCEEEEEE--CCCCCEEEEEECCCeEEEEEe
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV-KTYTGNGGIFEVCW--NKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~-~~~~~~~~i~~~~w--s~~g~~la~~~~d~~v~v~~~ 499 (501)
.|.+++|+ |++||+++ +++|++|++.+++.. ..+.+...+++++| +|+|..|++++.+|+ +||.+
T Consensus 228 ~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 228 KITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp CCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred cEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 99999999 68999998 699999999988873 33344456999999 999999999999999 99975
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3e-31 Score=247.51 Aligned_cols=288 Identities=14% Similarity=0.098 Sum_probs=206.9
Q ss_pred eeEEEECCCCC---EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeC
Q 010794 156 VCACAWSPAGS---LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 232 (501)
Q Consensus 156 V~~~~~sp~~~---~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~ 232 (501)
|.++-|-.-|- -++++++ ..|++|+..++. .....+.. ..+..+|..+.|.||..-|+....
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~----------~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~ 106 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAW----------QWEKLYTW----HFAEVPVLQIVPVPDVYNLVCVAL 106 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSS----------BEEEEEEE----ECCSSCEEEECCCTTCCSCEEEEE
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCc----------cceeeEEE----eccCceeEEEEEcCcccceeeeee
Confidence 56676755443 5777765 689999987641 11222222 234568999999997543322111
Q ss_pred CCeEEEEECCCceeEeecCCCCCEEEEEecCC----CCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCce
Q 010794 233 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKK----GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 308 (501)
Q Consensus 233 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~----~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (501)
-.-+...|.+|+|+|+ ++++++++.+ +++|++.+++
T Consensus 107 ----------------~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~---------------------- 146 (356)
T 2w18_A 107 ----------------GNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRR---------------------- 146 (356)
T ss_dssp ----------------CSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTE----------------------
T ss_pred ----------------ccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCc----------------------
Confidence 1125568899999999 8899998854 7889876554
Q ss_pred EEEec---CCCeEEEEEcCC-CcceeeecCCCCceeEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeeecccCC---
Q 010794 309 FATSS---TDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDP---TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS--- 378 (501)
Q Consensus 309 ~~~~~---~d~~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~--- 378 (501)
++.++ .|+.|++|++.. ++.+..+.+|...+..++|+| ++.+||+|+.|++|+|||++++++++++..|.
T Consensus 147 lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v 226 (356)
T 2w18_A 147 LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ 226 (356)
T ss_dssp EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence 22232 488999999954 677778889999999999999 78999999999999999999999999997654
Q ss_pred CCEEEEEEcCCCCCC---CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-----eCCCCCeEEEEECCCCCEEEEEeCC
Q 010794 379 KEIYTIRWSPTGSGT---NNPNQQLILASASFDSTVKLWDVELGKLLYSL-----NGHREPVYSLAFSPTGEYLASGSLD 450 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~---~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~spdg~~lasgs~D 450 (501)
..+.+++|+|+|... .++.....+++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++|+|+.|
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~D 304 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTS 304 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETT
T ss_pred eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCC
Confidence 357778999988521 01111123588999999999999999987765 4776666555554 8899999999
Q ss_pred CcEEEEeCCCCeeEEEEecCC-CE-EEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 451 KSMHIWSLKEGKIVKTYTGNG-GI-FEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 451 g~i~iw~~~~~~~~~~~~~~~-~i-~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++|+|||+.+|+++.++.++. .+ ..++|||||++||+|+.|++|+|||+.
T Consensus 305 gTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 305 GTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 999999999999999998653 34 468999999999999999999999974
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-33 Score=267.07 Aligned_cols=235 Identities=9% Similarity=0.054 Sum_probs=193.5
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCC
Q 010794 219 DWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 297 (501)
Q Consensus 219 ~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 297 (501)
.+.+++.+|++|+.||.|++|+... .....+. ...|.++.|+|. +++|+.|++|++|+...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------- 104 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------- 104 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT-------------
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC-------------
Confidence 3456889999999999999999764 3444443 467788889988 99999999999999754
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCCCcceeeec-CCCCceeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeeec
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDL 374 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 374 (501)
.+.+|+......+..+. +|.+.|.+++|+| ++++|++|+.||+|++||+.+++.+..+
T Consensus 105 -------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 105 -------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp -------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE
T ss_pred -------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 24556666666555544 7788999999999 9999999999999999999998886655
Q ss_pred c-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE-EEeeC-CCCCeEEEEECCCCCEEEEEeCCC
Q 010794 375 R-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL-YSLNG-HREPVYSLAFSPTGEYLASGSLDK 451 (501)
Q Consensus 375 ~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~-h~~~v~~l~~spdg~~lasgs~Dg 451 (501)
. .+...+.+++|+|++. +|++|+.||.|++||+++++.+ ..+.+ |..+|++|+|+|+|.+|++++ |+
T Consensus 166 ~~~~~~~i~~~~~~pdg~---------~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~ 235 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDSL---------LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ 235 (343)
T ss_dssp CCCSSCCCCEEEECTTSC---------EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SS
T ss_pred ecCCCCceEEEEECCCCC---------EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CC
Confidence 3 3455799999999986 8999999999999999999887 78888 999999999999999999999 55
Q ss_pred cEEEEeCCCCeeEEEEec---C-CCE--EEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010794 452 SMHIWSLKEGKIVKTYTG---N-GGI--FEVCWNKEGDKIAACFA-NHTVCVLDFR 500 (501)
Q Consensus 452 ~i~iw~~~~~~~~~~~~~---~-~~i--~~~~ws~~g~~la~~~~-d~~v~v~~~~ 500 (501)
.|++||+++++.+..+.. + ..+ .+++|+|+|++||+|+. |+.|.||++.
T Consensus 236 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 236 TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 999999998876554432 1 122 46999999999999998 9999999873
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=8.2e-30 Score=250.85 Aligned_cols=273 Identities=12% Similarity=0.136 Sum_probs=219.2
Q ss_pred CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCC-
Q 010794 166 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTNG- 243 (501)
Q Consensus 166 ~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l-~sg~~dg~i~iw~~~~- 243 (501)
.++++++.|+.|++||+.++.. ...+.. ...+.+++|+|+++++ ++++.|+.|++|+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~-------------~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV-------------TATIPV-----GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-------------EEEEEC-----SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT
T ss_pred EEEEEcCCCCEEEEEECCCCeE-------------EEEeec-----CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC
Confidence 4678899999999999876531 111111 2358999999999976 6777999999999864
Q ss_pred ceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc--eEEEecCCCeEEE
Q 010794 244 DLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV--SFATSSTDNMIYV 320 (501)
Q Consensus 244 ~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~i~~ 320 (501)
.....+..+. .+.+++|+|++++|+ +++.+++|++||+.+++....+..+. .+..+.|.++. .+++++.++.|++
T Consensus 65 ~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 65 NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEE
Confidence 4444555444 899999999999875 45567999999999998877776543 56778886543 3478888999999
Q ss_pred EEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCc
Q 010794 321 CKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ 399 (501)
Q Consensus 321 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~ 399 (501)
|++..++.+..+..|. .+.+++|+|++++| ++++.++.|++||+.+++.+..+. +...+.+++|+|++.
T Consensus 143 ~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~-------- 212 (391)
T 1l0q_A 143 INTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGT-------- 212 (391)
T ss_dssp EETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSS--------
T ss_pred EECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCC--------
Confidence 9999988888777654 56899999999877 678889999999999988776665 456789999999986
Q ss_pred EEEEEEe---CCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeeEEEEecC
Q 010794 400 LILASAS---FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKEGKIVKTYTGN 470 (501)
Q Consensus 400 ~~l~sgs---~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~~~~~~~~~~~ 470 (501)
+|++++ .++.|++||+.+++.+..+..|. .+.+++|+|+|++| ++++.|+.|++||+.+++++..+...
T Consensus 213 -~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 213 -KAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp -EEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred -EEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence 455555 78999999999999998888765 57999999999987 67788999999999999988877543
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-31 Score=264.42 Aligned_cols=237 Identities=14% Similarity=0.126 Sum_probs=199.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECC-Cc---eeEeec--------------------------------------
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTN-GD---LKCTLS-------------------------------------- 250 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~-~~---~~~~~~-------------------------------------- 250 (501)
.++.+++|+++|++|+++ .++.|++|++. +. ....+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999966665 57899999964 33 222222
Q ss_pred ----------------CCCCCEEEEEecCCCCEE-EEEecCCeEEEEeCC--CcceeEeeeeccCCeEEEecCCCceEEE
Q 010794 251 ----------------KHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVK--TEEWKQQFEFHSGPTLDVDWRNNVSFAT 311 (501)
Q Consensus 251 ----------------~h~~~V~~l~~~~~~~~l-~s~s~D~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (501)
+|.+.|++++|+|++++| ++|+.|++|++||+. ++.....+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------ 145 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR------------------ 145 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE------------------
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec------------------
Confidence 344479999999999996 889999999999987 5543332211
Q ss_pred ecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee----ecccCCCCEEEEEEc
Q 010794 312 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH----DLREHSKEIYTIRWS 387 (501)
Q Consensus 312 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~----~~~~~~~~v~~i~~~ 387 (501)
..|...|++++|+|++++|++|+.||.|++|++.++.... .+..|...|.+++|+
T Consensus 146 ---------------------~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 204 (450)
T 2vdu_B 146 ---------------------FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLI 204 (450)
T ss_dssp ---------------------EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEE
T ss_pred ---------------------ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEc
Confidence 1356789999999999999999999999999998776544 778899999999999
Q ss_pred CC---CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010794 388 PT---GSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 463 (501)
Q Consensus 388 p~---g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 463 (501)
|+ +. +|++|+.|+.|++||+.+++.+.. +.+|...|++++|+ ++++|++|+.|++|++||+.+++.
T Consensus 205 p~~~~~~---------~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 205 KDSDGHQ---------FIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp ECTTSCE---------EEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred CCCCCCc---------EEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 98 64 799999999999999999988877 66899999999999 999999999999999999999998
Q ss_pred EEEEec--------------------------CCCEEEEEECCCCCEEEEEE-CCCeEEEEEe
Q 010794 464 VKTYTG--------------------------NGGIFEVCWNKEGDKIAACF-ANHTVCVLDF 499 (501)
Q Consensus 464 ~~~~~~--------------------------~~~i~~~~ws~~g~~la~~~-~d~~v~v~~~ 499 (501)
+..+.. ...+.+++|+|+|++|++++ .++.|.||++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 275 LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 877752 23588999999999999998 8999999998
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1e-29 Score=250.17 Aligned_cols=263 Identities=13% Similarity=0.117 Sum_probs=221.3
Q ss_pred CEEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEE-EEEecCCeEEEEeCCCcceeEeeeeccCCeEEEe
Q 010794 225 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (501)
.++++++.|+.|++|+... .....+..|. .+.+++|+|++.+| ++++.|++|++||+.+++....+..+. .+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 4688899999999999875 4445566554 58999999999987 677789999999999999888777655 778888
Q ss_pred cCCCc--eEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeeecccCCC
Q 010794 303 WRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKYVHDLREHSK 379 (501)
Q Consensus 303 ~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 379 (501)
|.++. .+++++.++.|++|++..++.+..+..| ..+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+ .
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~ 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-R 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-S
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-C
Confidence 86543 3456677899999999998888777654 468999999999977 78888999999999999888777655 4
Q ss_pred CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEe---CCCcEEEE
Q 010794 380 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS---LDKSMHIW 456 (501)
Q Consensus 380 ~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs---~Dg~i~iw 456 (501)
.+..++|+|++. .++++++.++.|++||+++++.+..+. +...+.+++|+|+|++|++++ .++.|++|
T Consensus 159 ~~~~~~~~~dg~--------~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 159 SPKGIAVTPDGT--------KVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp SEEEEEECTTSS--------EEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred CcceEEECCCCC--------EEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 568999999885 355788899999999999999887776 456789999999999999888 68999999
Q ss_pred eCCCCeeEEEEecCCCEEEEEECCCCCEE-EEEECCCeEEEEEee
Q 010794 457 SLKEGKIVKTYTGNGGIFEVCWNKEGDKI-AACFANHTVCVLDFR 500 (501)
Q Consensus 457 ~~~~~~~~~~~~~~~~i~~~~ws~~g~~l-a~~~~d~~v~v~~~~ 500 (501)
|+.+++.+..+..+..+.+++|+|+|++| ++++.|+.|.|||+.
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 99999999888887789999999999987 566889999999974
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.8e-31 Score=246.81 Aligned_cols=187 Identities=17% Similarity=0.193 Sum_probs=138.2
Q ss_pred CCCEEEEEe--CCCeEEEEECC--CceeEeecCCCCCEEEEEecC---CCCEEEEEecCCeEEEEeCCCcceeEeeeecc
Q 010794 223 EGTLLATGS--YDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK---KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 223 ~~~~l~sg~--~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~---~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
+++++.+++ .|+.|++|++. ++....+.+|...+..++|++ ++.+|++|+.|++|+|||+.+++++.++..|.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 444555533 58888888863 455566778888888899998 67899999999999999999887766654321
Q ss_pred CCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE------------EEEeCCCeEEEE
Q 010794 296 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL------------ASCSDDVTAKIW 363 (501)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l------------~s~s~Dg~i~iw 363 (501)
. |...+.+++|+|+|.++ ++|+.|++|++|
T Consensus 224 ~--------------------------------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 224 S--------------------------------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp -----------------------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred c--------------------------------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 1 11245666777777665 678999999999
Q ss_pred eCCCCceeeec-----ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeE-EEEE
Q 010794 364 NMKQDKYVHDL-----REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVY-SLAF 437 (501)
Q Consensus 364 d~~~~~~~~~~-----~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~ 437 (501)
|..+++.+..+ .+|...+.+..++ +. ++++|+.|++|+|||+.+++++.++.+|...+. .++|
T Consensus 266 d~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~---------~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 266 NPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DH---------CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp ETTTTEEEEEEEECCCTTCCCCEEEEEEE--TT---------EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEE
T ss_pred ECCCCEEEEEEEeeccCCCcceeEccccC--CC---------EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEE
Confidence 99999876544 2444444433333 22 689999999999999999999999999987655 5899
Q ss_pred CCCCCEEEEEeCCCcEEEEeC
Q 010794 438 SPTGEYLASGSLDKSMHIWSL 458 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~ 458 (501)
||||++|++|+.|++|+||++
T Consensus 335 SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999985
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=1.2e-29 Score=253.14 Aligned_cols=286 Identities=13% Similarity=0.099 Sum_probs=228.0
Q ss_pred EccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEee-ccccccCCCCeEEEEECCCCCE
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-KGRTNEKSKDVTTLDWNGEGTL 226 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~~~~s~~~~~ 226 (501)
.+..| ..+.+++|+|++.++++++.|+.|++||+.++... ... ......|...|.+++|++++.+
T Consensus 118 ~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~~ 183 (433)
T 3bws_A 118 RFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTV-------------RLSPPEKYKKKLGFVETISIPEHNEL 183 (433)
T ss_dssp EEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEE-------------EECCCHHHHTTCCEEEEEEEGGGTEE
T ss_pred EEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEe-------------eecCcccccccCCceeEEEEcCCCEE
Confidence 34444 45679999998888888889999999998876421 111 1122345678999999999999
Q ss_pred EEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC
Q 010794 227 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 304 (501)
Q Consensus 227 l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (501)
+++++.|+.|++|+... .....+..|...+.+++|+|++.+++ +++.|++|++||+++++....+..+. .+..+.|.
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~ 262 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLS 262 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEEC
T ss_pred EEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEc
Confidence 99999999999999865 55567778999999999999999885 55579999999999988877766543 46777776
Q ss_pred CCc-eEEEec--------CCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeeec
Q 010794 305 NNV-SFATSS--------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDDVTAKIWNMKQDKYVHDL 374 (501)
Q Consensus 305 ~~~-~~~~~~--------~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~Dg~i~iwd~~~~~~~~~~ 374 (501)
++. .+++++ .|+.|++|++..++.+..+ .|...+.+++|+|+++. +++++.|+.|++||+.+++.+..+
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe
Confidence 443 555554 5889999999888766554 45668899999999974 577799999999999988887766
Q ss_pred ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC---------------CCeEEEEeCCCCeEEEEeeCCCCCeEEEEECC
Q 010794 375 REHSKEIYTIRWSPTGSGTNNPNQQLILASASF---------------DSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 439 (501)
Q Consensus 375 ~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~---------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 439 (501)
. +...+.+++|+|++. +|++++. ||.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 342 ~-~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~ 410 (433)
T 3bws_A 342 P-VFDKPNTIALSPDGK---------YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSP 410 (433)
T ss_dssp E-CSSSEEEEEECTTSS---------EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECT
T ss_pred c-CCCCCCeEEEcCCCC---------EEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcC
Confidence 5 667899999999986 4555554 579999999999999888864 5789999999
Q ss_pred CCCEEEEEeC-CCcEEEEeCCC
Q 010794 440 TGEYLASGSL-DKSMHIWSLKE 460 (501)
Q Consensus 440 dg~~lasgs~-Dg~i~iw~~~~ 460 (501)
+|++|++++. |+.|++|++..
T Consensus 411 dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 411 DNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TSCEEEEEETTTTEEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEecC
Confidence 9999988875 99999999863
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=5e-29 Score=254.77 Aligned_cols=312 Identities=12% Similarity=0.109 Sum_probs=242.2
Q ss_pred EECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q 010794 160 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 239 (501)
Q Consensus 160 ~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw 239 (501)
+|+|++.++++++.|++|.+||..+++.. ..+.. + ..+.+++|+|+|++|++++.|+.|++|
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~-------------~~i~~---g--~~~~~v~~spdg~~l~v~~~d~~V~v~ 205 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIV-------------KVIDT---G--YAVHISRMSASGRYLLVIGRDARIDMI 205 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEE-------------EEEEC---S--TTEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEE-------------EEEec---C--cccceEEECCCCCEEEEECCCCeEEEE
Confidence 38999999999999999999998776421 12211 1 128899999999999999999999999
Q ss_pred EC--C-CceeEeecCCCCCEEEEEecC----CCCEEEEEec-CCeEEEEeCCCcceeEeeeec----------cC-CeEE
Q 010794 240 ST--N-GDLKCTLSKHKGPIFSLKWNK----KGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFH----------SG-PTLD 300 (501)
Q Consensus 240 ~~--~-~~~~~~~~~h~~~V~~l~~~~----~~~~l~s~s~-D~~i~iwd~~~~~~~~~~~~~----------~~-~~~~ 300 (501)
|+ . +.....+. +...+..++|+| +|++|++++. +++|.+||..+++.+..+..+ .. .+..
T Consensus 206 D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~ 284 (543)
T 1nir_A 206 DLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAA 284 (543)
T ss_dssp ETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEE
T ss_pred ECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEE
Confidence 99 4 34445555 445679999999 9999998874 899999999999988877642 22 4555
Q ss_pred EecC--CCceEEEecCCCeEEEEEcCCCccee--eecCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEeCCCCceeeecc
Q 010794 301 VDWR--NNVSFATSSTDNMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLAS-CSDDVTAKIWNMKQDKYVHDLR 375 (501)
Q Consensus 301 ~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s-~s~Dg~i~iwd~~~~~~~~~~~ 375 (501)
+.+. ....+++...++.|.+|++.....+. .+ .+...+..+.|+|+|++|++ +..+++|.+||+.+++++..+.
T Consensus 285 i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 285 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 6554 34556777889999999998765443 33 35566888999999997654 4568999999999999887765
Q ss_pred c----CCCCEEEEEEcCCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCC-------CeEEEEeeCCCCCeEEEEECCCCCE
Q 010794 376 E----HSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVEL-------GKLLYSLNGHREPVYSLAFSPTGEY 443 (501)
Q Consensus 376 ~----~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~spdg~~ 443 (501)
. |......+ ++|++. .++++++ .|++|++||+.+ .+++.++.+|...+..|+|||+|++
T Consensus 364 ~g~~ph~g~g~~~-~~p~~g--------~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 364 VGKTPHPGRGANF-VHPKYG--------PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH 434 (543)
T ss_dssp CSSSBCCTTCEEE-EETTTE--------EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE
T ss_pred cCCCCCCCCCccc-CCCCCc--------cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc
Confidence 3 44333333 356532 3677775 689999999998 8999999999888999999999999
Q ss_pred EEEEe-------CCCcEEEEeCCCCeeE-EEE---------ecCCCEEEEEECCCCCEEEEEE-----CCCeEEEEEee
Q 010794 444 LASGS-------LDKSMHIWSLKEGKIV-KTY---------TGNGGIFEVCWNKEGDKIAACF-----ANHTVCVLDFR 500 (501)
Q Consensus 444 lasgs-------~Dg~i~iw~~~~~~~~-~~~---------~~~~~i~~~~ws~~g~~la~~~-----~d~~v~v~~~~ 500 (501)
|++++ .+++|.+||+.+++.. ..+ .+...+..+.|+|+|+.|+++. .++.|.|||.+
T Consensus 435 l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 435 LYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp EEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 99987 2779999999998876 444 2234589999999999988774 36899999864
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1.6e-28 Score=262.21 Aligned_cols=334 Identities=15% Similarity=0.141 Sum_probs=239.2
Q ss_pred ccceeEEEECCCCCEEEEEEC-CC-----cEEEEecCCCCCCCCCCCCCce----EEEE--Eeeccccc-cCCCCeEEEE
Q 010794 153 TSEVCACAWSPAGSLLASGSG-DS-----TARIWTIADGTSNGGAQNGPLN----VLVL--KHVKGRTN-EKSKDVTTLD 219 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~-D~-----~i~iWd~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~-~~~~~V~~~~ 219 (501)
...|.+++|||||++|++++. |+ .|++||+.++............ .+.. ........ .....|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346899999999999999998 88 8999999876421100000000 0000 00000000 0002378899
Q ss_pred ECCCCCEEEEEeCCCeEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccC
Q 010794 220 WNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 296 (501)
Q Consensus 220 ~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 296 (501)
|||||++|++++. +.|++|++.+. ....+..|...+..++|+|+|++|++++ ++.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999987 99999999876 6667788888999999999999999887 56999999998876554433322
Q ss_pred C----------------eEEEecCCC-ceEEEecCCC---------------------------------eEEEEEcCC-
Q 010794 297 P----------------TLDVDWRNN-VSFATSSTDN---------------------------------MIYVCKIGE- 325 (501)
Q Consensus 297 ~----------------~~~~~~~~~-~~~~~~~~d~---------------------------------~i~~~~~~~- 325 (501)
. +..+.|.++ ..++.++.|+ .|++|++..
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 1 355677654 3455554443 788889877
Q ss_pred Ccceeeec--CCCCceeEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCceeeecccCCC----CEEEEEEcCCCCCCC
Q 010794 326 NRPIKTFA--GHQGEVNCVKWDPTGSLLASCSD-----DVTAKIWNMKQDKYVHDLREHSK----EIYTIRWSPTGSGTN 394 (501)
Q Consensus 326 ~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~-----Dg~i~iwd~~~~~~~~~~~~~~~----~v~~i~~~p~g~~~~ 394 (501)
++...... .|...+..++| |||++|++++. +..|++||+.+++....+..+.. .+..++|+|+|.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~--- 349 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS--- 349 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC---
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe---
Confidence 66554433 47788999999 99999887654 57899999998887665554432 345789999885
Q ss_pred CCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCeEEE-EECCCCCEEEE-EeCCC--cEEEEeCCC-CeeEEEEe
Q 010794 395 NPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSL-AFSPTGEYLAS-GSLDK--SMHIWSLKE-GKIVKTYT 468 (501)
Q Consensus 395 ~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l-~~spdg~~las-gs~Dg--~i~iw~~~~-~~~~~~~~ 468 (501)
++++++.||.++||.+. .+. ...+..|...|..+ +|+|+|++|+. ++.++ .++||++.. +..+..+.
T Consensus 350 ------~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 350 ------ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp ------EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred ------EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 77888899988888765 345 77888888889887 59999997764 55555 899999864 55556666
Q ss_pred cCCCEEEEEECCCCCEEEEEECC----CeEEEEEe
Q 010794 469 GNGGIFEVCWNKEGDKIAACFAN----HTVCVLDF 499 (501)
Q Consensus 469 ~~~~i~~~~ws~~g~~la~~~~d----~~v~v~~~ 499 (501)
....+..++|+|||++||....+ ..+.+++.
T Consensus 423 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 423 KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 66678999999999998876544 35677663
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.2e-28 Score=244.47 Aligned_cols=301 Identities=15% Similarity=0.153 Sum_probs=225.6
Q ss_pred CccceeEEEECCCCC-EEEEEE----CCC----cEEEEec--CCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE
Q 010794 152 HTSEVCACAWSPAGS-LLASGS----GDS----TARIWTI--ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 220 (501)
Q Consensus 152 H~~~V~~~~~sp~~~-~l~sgs----~D~----~i~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 220 (501)
+...|+..+|++.|. ++++|+ .|| .|+|||+ .++... ....+.+ +...+..+++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~-----------~~~~~~~----~~~~~~~~~~ 125 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVL-----------AQNSYKV----NKQWLRYAGH 125 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEE-----------EEEEEEE----CGGGHHHHHH
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEE-----------eeeEEEc----ChhHHHHHHH
Confidence 345678888999875 666887 567 8999999 765421 0011111 1223444444
Q ss_pred CC--------------CCCEEEEEeCC------CeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCC---eE
Q 010794 221 NG--------------EGTLLATGSYD------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK---TA 277 (501)
Q Consensus 221 s~--------------~~~~l~sg~~d------g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~---~i 277 (501)
++ .+..++.++.+ +.|++||..+.....+.+|...|.+++|+|+|++|++++.++ .|
T Consensus 126 ~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i 205 (415)
T 2hqs_A 126 TASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSAL 205 (415)
T ss_dssp HHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred HHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEE
Confidence 32 25566666554 799999998877778888999999999999999999999885 99
Q ss_pred EEEeCCCcceeEeeeeccCCeEEEecCCCc-eEE-EecCCC--eEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEE
Q 010794 278 IVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFA-TSSTDN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 353 (501)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~d~--~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 353 (501)
++||+.+++.. .+..+...+..+.|.++. .++ +++.++ .|++|++.++.. ..+..|...+.+++|+|||++|++
T Consensus 206 ~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 206 VIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp EEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEE
Confidence 99999988765 455567778889997654 344 555554 599999987665 567788889999999999999988
Q ss_pred EeC-CC--eEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC---CeEEEEeCCCCeEEEEeeC
Q 010794 354 CSD-DV--TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD---STVKLWDVELGKLLYSLNG 427 (501)
Q Consensus 354 ~s~-Dg--~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~ 427 (501)
++. ++ .|.+||+.++.. ..+..+...+.+++|+|+|. +|++++.+ ..|++||+.+++.. .+..
T Consensus 284 ~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~---------~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~ 352 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGK---------FMVMVSSNGGQQHIAKQDLATGGVQ-VLSS 352 (415)
T ss_dssp EECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSS---------EEEEEEECSSCEEEEEEETTTCCEE-ECCC
T ss_pred EECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCC---------EEEEEECcCCceEEEEEECCCCCEE-EecC
Confidence 876 45 677789887764 34555667889999999986 55655543 58999999988774 5665
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCC---cEEEEeCCCCeeEEEEec-CCCEEEEEECCCC
Q 010794 428 HREPVYSLAFSPTGEYLASGSLDK---SMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEG 482 (501)
Q Consensus 428 h~~~v~~l~~spdg~~lasgs~Dg---~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g 482 (501)
|. .+.+++|+|+|++|++++.++ .|++|++..+. ...+.. .+.|.+++|+|.-
T Consensus 353 ~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 353 TF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp SS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-EEECCCSSSEEEEEEECCCC
T ss_pred CC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-EEEeeCCCCCCcCCcccccc
Confidence 64 899999999999999988877 79999987554 445544 4679999999964
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.96 E-value=9.4e-27 Score=257.30 Aligned_cols=322 Identities=11% Similarity=0.083 Sum_probs=236.0
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECC------CcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCe--
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGD------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV-- 215 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D------~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-- 215 (501)
.....|.+|...|.+++|||||++||+++.+ ..|++|++.++.. +.+. .+...+
T Consensus 43 g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~--------------~~lt----~~~~~~~~ 104 (1045)
T 1k32_A 43 GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI--------------KRIT----YFSGKSTG 104 (1045)
T ss_dssp CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE--------------EECC----CCCEEEET
T ss_pred CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe--------------EEcc----cCCCcccc
Confidence 3456778899999999999999999988653 4799999876531 1111 122334
Q ss_pred -----EEEEECCCCCEEEEEeCC------CeEEEEECCCcee--------------------------------------
Q 010794 216 -----TTLDWNGEGTLLATGSYD------GQARIWSTNGDLK-------------------------------------- 246 (501)
Q Consensus 216 -----~~~~~s~~~~~l~sg~~d------g~i~iw~~~~~~~-------------------------------------- 246 (501)
..++|+|||+++++++.+ ..|++|+..+...
T Consensus 105 ~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~ 184 (1045)
T 1k32_A 105 RRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTR 184 (1045)
T ss_dssp TEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTC
T ss_pred cccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCc
Confidence 899999999977887754 3577777543221
Q ss_pred ------------EeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCC-cceeEeeeeccCCeEEEecCCCc-eEEEe
Q 010794 247 ------------CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSGPTLDVDWRNNV-SFATS 312 (501)
Q Consensus 247 ------------~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 312 (501)
..+.+|...+.++.|+++ ..+++++.|+++.+|.+.. +.....+..+.. +....|.++. .++.+
T Consensus 185 ~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~~la~~ 262 (1045)
T 1k32_A 185 GKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRILFS 262 (1045)
T ss_dssp CEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSSCEEEE
T ss_pred CCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCCEEEEE
Confidence 122456777888889887 5667778889999997653 222333333332 3334554433 34444
Q ss_pred cCCCeEEEEEcCCCcceeeecC-----------CCCceeEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeeecccCCC-
Q 010794 313 STDNMIYVCKIGENRPIKTFAG-----------HQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK- 379 (501)
Q Consensus 313 ~~d~~i~~~~~~~~~~~~~~~~-----------h~~~v~~v~~~-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~- 379 (501)
.++.|++|++.. ..+..+.+ |...+.+++|+ |||++|++++ ++.|.+|++..+... .+..+..
T Consensus 263 -~~~~i~~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~ 338 (1045)
T 1k32_A 263 -KGGSIYIFNPDT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRI 338 (1045)
T ss_dssp -ETTEEEEECTTT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCE
T ss_pred -eCCEEEEecCCc-eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcc
Confidence 588999999843 33445544 34478999999 9999999888 789999999877644 3556666
Q ss_pred CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEE-EEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010794 380 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVK-LWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 458 (501)
Q Consensus 380 ~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~-iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 458 (501)
.+..++|+ +|. .|++++.++.|. +|++..++.. .+.+|...+..++|||||++||+++.++.|++||+
T Consensus 339 ~~~~~~~s-dg~---------~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 339 RYVRRGGD-TKV---------AFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECSS-SEE---------EEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEeeeEc-CCC---------eEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 88999999 875 577777788888 9999877654 44478888999999999999999999999999999
Q ss_pred CCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCC----------eEEEEEee
Q 010794 459 KEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANH----------TVCVLDFR 500 (501)
Q Consensus 459 ~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~d~----------~v~v~~~~ 500 (501)
.++++...... .+.+.+++|||||++||+++.++ .|.+||+.
T Consensus 408 ~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 408 ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99988777744 44578999999999999887654 89999864
No 131
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=2.2e-26 Score=254.32 Aligned_cols=337 Identities=13% Similarity=0.133 Sum_probs=249.1
Q ss_pred ceEEccCCccce-------eEEEECCCCCEEEEEECC------CcEEEEecCCCCCCCCCCC---------C--------
Q 010794 145 DVTILEGHTSEV-------CACAWSPAGSLLASGSGD------STARIWTIADGTSNGGAQN---------G-------- 194 (501)
Q Consensus 145 ~~~~l~~H~~~V-------~~~~~sp~~~~l~sgs~D------~~i~iWd~~~~~~~~~~~~---------~-------- 194 (501)
....|.+|...+ .+++|||||+++++++.+ ..|.+|++.++........ +
T Consensus 91 ~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~ 170 (1045)
T 1k32_A 91 EIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNT 170 (1045)
T ss_dssp EEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESC
T ss_pred CeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccC
Confidence 356788898888 999999999988888755 3577777765532110000 0
Q ss_pred -------------CceEEEEEe--eccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC--CCceeEeecCCCCCEE
Q 010794 195 -------------PLNVLVLKH--VKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWST--NGDLKCTLSKHKGPIF 257 (501)
Q Consensus 195 -------------~~~~~~~~~--~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~--~~~~~~~~~~h~~~V~ 257 (501)
...+..... .......+...+.++.|+++ .++++++.++.++||.. .+.....+..|. .+.
T Consensus 171 ~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~ 248 (1045)
T 1k32_A 171 FELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYY 248 (1045)
T ss_dssp SCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSC
T ss_pred CCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Ccc
Confidence 000000000 00011345678999999998 67778888899999974 344455566565 356
Q ss_pred EEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee-----------ccCCeEEEecC-CCce-EEEecCCCeEEEEEcC
Q 010794 258 SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-----------HSGPTLDVDWR-NNVS-FATSSTDNMIYVCKIG 324 (501)
Q Consensus 258 ~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~-~~~~~~d~~i~~~~~~ 324 (501)
.++|+|+|++|+++ .++.|++||+...... .+.. +...+..+.|. ++.. ++.++ ++.+++|+..
T Consensus 249 ~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~ 325 (1045)
T 1k32_A 249 PRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS 325 (1045)
T ss_dssp EEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT
T ss_pred eeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC
Confidence 77999999988887 4899999998554433 3332 22346677787 6543 44444 7899999987
Q ss_pred CCcceeeecCCCC-ceeEEEEcCCCCEEEEEeCCCeEE-EEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEE
Q 010794 325 ENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAK-IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 402 (501)
Q Consensus 325 ~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~Dg~i~-iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l 402 (501)
.+... .+..|.. .+.+++|+ +|+.|++++.++.+. +|++.++.... +..+...+..++|+|+|. +|
T Consensus 326 ~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~---------~l 393 (1045)
T 1k32_A 326 GTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGK---------FA 393 (1045)
T ss_dssp SSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSS---------EE
T ss_pred CCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCC---------EE
Confidence 66543 4567777 89999999 999999999988898 99988766543 447778899999999997 78
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCC----------cEEEEeCCCCeeEEEEecCCC
Q 010794 403 ASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK----------SMHIWSLKEGKIVKTYTGNGG 472 (501)
Q Consensus 403 ~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg----------~i~iw~~~~~~~~~~~~~~~~ 472 (501)
++++.++.|++||+.+++....+.+|...|.+++|||||++|++++.++ .|++||+.+++......+...
T Consensus 394 a~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~ 473 (1045)
T 1k32_A 394 VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH 473 (1045)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSB
T ss_pred EEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcc
Confidence 8999999999999999998888878999999999999999999887654 899999999884333333445
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 473 IFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 473 i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
+..++|+|||++|++++.++...+|+
T Consensus 474 ~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 474 DYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred cCCceEcCCCCEEEEEecccCCcCcc
Confidence 88999999999999998877766665
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=2.3e-25 Score=227.75 Aligned_cols=295 Identities=14% Similarity=0.146 Sum_probs=223.2
Q ss_pred eEEcc-CCccceeEEEECCCCCEEEEEECCCcEEEEec--CCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC
Q 010794 146 VTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTI--ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 222 (501)
Q Consensus 146 ~~~l~-~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~ 222 (501)
+.++. +|. +++++|+|+|++|++++.|++|++||+ .++. .+..+. ....+..++|+|
T Consensus 172 ~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-------------~~~~i~-----~g~~p~~va~sp 231 (543)
T 1nir_A 172 VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-------------KVAEIK-----IGIEARSVESSK 231 (543)
T ss_dssp EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-------------EEEEEE-----CCSEEEEEEECC
T ss_pred EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-------------EEEEEe-----cCCCcceEEeCC
Confidence 45555 444 899999999999999999999999998 4432 112221 134578999999
Q ss_pred ----CCCEEEEEeC-CCeEEEEECCC-ceeEeecC----------CCC-CEEEEEecCCCCE-EEEEecCCeEEEEeCCC
Q 010794 223 ----EGTLLATGSY-DGQARIWSTNG-DLKCTLSK----------HKG-PIFSLKWNKKGDY-LLTGSCDKTAIVWDVKT 284 (501)
Q Consensus 223 ----~~~~l~sg~~-dg~i~iw~~~~-~~~~~~~~----------h~~-~V~~l~~~~~~~~-l~s~s~D~~i~iwd~~~ 284 (501)
+|+++++++. +++|.|||... .....+.. |.. .+.++.++|++.. +++...+++|.+||+.+
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999885 89999999764 33444433 333 6899999998765 56677789999999987
Q ss_pred cceeE--eeeeccCCeEEEecCCCc--eEEEecCCCeEEEEEcCCCcceeeecC----CCCceeEEEEcCC-CCEEEEEe
Q 010794 285 EEWKQ--QFEFHSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPT-GSLLASCS 355 (501)
Q Consensus 285 ~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~----h~~~v~~v~~~~~-~~~l~s~s 355 (501)
.+... .+. +...+..+.|.++. .++++..++.|.+||..+++.+..+.. |.+....+ ++|+ +.++++++
T Consensus 312 ~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~ 389 (543)
T 1nir_A 312 IDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH 389 (543)
T ss_dssp SSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred CCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc
Confidence 65443 222 33445566665443 345667789999999999988877763 55444333 4777 66777776
Q ss_pred -CCCeEEEEeCCC-------CceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe-------CCCeEEEEeCCCCe
Q 010794 356 -DDVTAKIWNMKQ-------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS-------FDSTVKLWDVELGK 420 (501)
Q Consensus 356 -~Dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs-------~dg~i~iwd~~~~~ 420 (501)
.|++|.+||+.+ .++++++..|...+..++++|++. .|.+++ .+++|.+||+.+++
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~---------~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS---------HLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC---------EEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC---------cEEEecCCCCCcccCceEEEEECCCCC
Confidence 689999999988 888999998888888999999987 667765 26799999999888
Q ss_pred EE-EEe--------eCCCCCeEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCeeEEEEecCC
Q 010794 421 LL-YSL--------NGHREPVYSLAFSPTGEYLASGS-----LDKSMHIWSLKEGKIVKTYTGNG 471 (501)
Q Consensus 421 ~~-~~~--------~~h~~~v~~l~~spdg~~lasgs-----~Dg~i~iw~~~~~~~~~~~~~~~ 471 (501)
.. ..+ ..+...+..+.|+|+|++|..+. .|+.|.|||..++++++++....
T Consensus 461 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 461 AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp SCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred CCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence 76 333 35567899999999999988663 47999999999999999987643
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.6e-25 Score=237.72 Aligned_cols=321 Identities=14% Similarity=0.166 Sum_probs=225.6
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEecCCCCCC-CCCCCCCceEEEEEeec-------cccccCCCCeEEEEECCCCCEE
Q 010794 156 VCACAWSPAGSLLASGSGDSTARIWTIADGTSN-GGAQNGPLNVLVLKHVK-------GRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 156 V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~V~~~~~s~~~~~l 227 (501)
+..+.|+ |..+++++.|+ | +||+.++... .. +....... .........|.+++|||| .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~-------l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~ 95 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTT-------RFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLV 95 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CE-------EEEHHHHHTTC-----------CCCEEEEETTT-TEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEE-------eechhHhhhhccchhccccccccCceeEEECCC-CeE
Confidence 5667888 67777888888 8 9999877531 00 00000000 000011256999999999 666
Q ss_pred EEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCC-----cceeEeeeeccCC-----
Q 010794 228 ATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-----EEWKQQFEFHSGP----- 297 (501)
Q Consensus 228 ~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~-----~~~~~~~~~~~~~----- 297 (501)
+.+ .++.|++|+..+.....+..+...+.+++|+|+|++|+++ .|+.|++||+.+ ++.......+...
T Consensus 96 ~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 96 VLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred EEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence 555 4599999999877666666777888999999999999885 689999999988 7665544333332
Q ss_pred ---------eEEEecCCC-ceEEEec---------------------------------CCCeEEEEEcCCCcceeeec-
Q 010794 298 ---------TLDVDWRNN-VSFATSS---------------------------------TDNMIYVCKIGENRPIKTFA- 333 (501)
Q Consensus 298 ---------~~~~~~~~~-~~~~~~~---------------------------------~d~~i~~~~~~~~~~~~~~~- 333 (501)
+..+.|.++ ..++.++ .+..|++|++..+.......
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 356778654 4455554 34679999998876544432
Q ss_pred -CCCCceeEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeeecc-c-CCC---CEEEEEEcC--CCCCCCCCCCcE
Q 010794 334 -GHQGEVNCVKWDPTGSLLASCSDDV-----TAKIWNMKQDKYVHDLR-E-HSK---EIYTIRWSP--TGSGTNNPNQQL 400 (501)
Q Consensus 334 -~h~~~v~~v~~~~~~~~l~s~s~Dg-----~i~iwd~~~~~~~~~~~-~-~~~---~v~~i~~~p--~g~~~~~~~~~~ 400 (501)
.|...+.+++|+|||++|++++.++ .|++||+.+++....+. . +.. .+..++|+| +|.
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~--------- 324 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ--------- 324 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE---------
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE---------
Confidence 4667899999999999999887775 89999999883333322 1 111 235678999 875
Q ss_pred EEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCeEE-EEECCCCCEEEEEeC-CC----cEEEEeCCCCeeEEEEecCCCE
Q 010794 401 ILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYS-LAFSPTGEYLASGSL-DK----SMHIWSLKEGKIVKTYTGNGGI 473 (501)
Q Consensus 401 ~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~-l~~spdg~~lasgs~-Dg----~i~iw~~~~~~~~~~~~~~~~i 473 (501)
+|++++.||.++||.+. .+..+..+..|...+.+ ++|+|+|+.|+.++. ++ .|..|++.+++ ...+.....+
T Consensus 325 ~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~ 403 (706)
T 2z3z_A 325 FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGM 403 (706)
T ss_dssp EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSE
T ss_pred EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCce
Confidence 78888899999999876 67777888888888887 799999998866554 44 67777887776 3444455678
Q ss_pred EEEEECCCCCEEEEEECC----CeEEEEEee
Q 010794 474 FEVCWNKEGDKIAACFAN----HTVCVLDFR 500 (501)
Q Consensus 474 ~~~~ws~~g~~la~~~~d----~~v~v~~~~ 500 (501)
.+++|+|||++|+....+ +.|.+||+.
T Consensus 404 ~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 404 HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred EEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 999999999998876544 469999864
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=8.1e-26 Score=224.02 Aligned_cols=272 Identities=12% Similarity=0.101 Sum_probs=210.2
Q ss_pred CeEEEEECCCCC-EEEEEe----CCC----eEEEEEC--CC-cee--EeecCCCCCEEEEEecC--------------CC
Q 010794 214 DVTTLDWNGEGT-LLATGS----YDG----QARIWST--NG-DLK--CTLSKHKGPIFSLKWNK--------------KG 265 (501)
Q Consensus 214 ~V~~~~~s~~~~-~l~sg~----~dg----~i~iw~~--~~-~~~--~~~~~h~~~V~~l~~~~--------------~~ 265 (501)
.|...+|++.|. ++++|+ .+| .++|||+ .. ... ..+.+|...+..+++++ .+
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 566778888774 666776 467 8999998 53 433 35778888777777664 15
Q ss_pred CEEEEEecC------CeEEEEeCCCcceeEeeeeccCCeEEEecCCC-ceEEEecCCC---eEEEEEcCCCcceeeecCC
Q 010794 266 DYLLTGSCD------KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDN---MIYVCKIGENRPIKTFAGH 335 (501)
Q Consensus 266 ~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~---~i~~~~~~~~~~~~~~~~h 335 (501)
..++.++.+ ++|++||+... ....+..|...+.++.|.++ ..++.++.++ .|++|++.+++.. .+..|
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 667666654 79999999754 45667778889999999755 4567776664 9999999887764 56678
Q ss_pred CCceeEEEEcCCCCEEE-EEeCCCe--EEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC-CC--
Q 010794 336 QGEVNCVKWDPTGSLLA-SCSDDVT--AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-DS-- 409 (501)
Q Consensus 336 ~~~v~~v~~~~~~~~l~-s~s~Dg~--i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~-dg-- 409 (501)
.+.+.+++|+|||+.|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+|. .|++++. ++
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~---------~l~~~s~~~g~~ 291 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQ---------NLAFTSDQAGRP 291 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSS---------EEEEEECTTSSC
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCC---------EEEEEECCCCCc
Confidence 88999999999999887 6766665 99999988765 55677888899999999986 5565554 45
Q ss_pred eEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEE
Q 010794 410 TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIA 486 (501)
Q Consensus 410 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la 486 (501)
.|.+||+.+++. ..+..|...+.+++|+|+|++|++++.+ ..|++|++.+++... +.....+.+++|+|+|++|+
T Consensus 292 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 292 QVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLAPNGTMVI 369 (415)
T ss_dssp EEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEECTTSSEEE
T ss_pred EEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEcCCCCEEE
Confidence 678889887764 4555677789999999999999988764 589999999988743 44444789999999999999
Q ss_pred EEECCC---eEEEEEe
Q 010794 487 ACFANH---TVCVLDF 499 (501)
Q Consensus 487 ~~~~d~---~v~v~~~ 499 (501)
+++.++ .|.+||+
T Consensus 370 ~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEETTEEEEEEEET
T ss_pred EEEcCCCccEEEEEEC
Confidence 888776 7888885
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=8e-26 Score=240.64 Aligned_cols=312 Identities=11% Similarity=0.086 Sum_probs=216.5
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC--
Q 010794 156 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD-- 233 (501)
Q Consensus 156 V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d-- 233 (501)
+.+++|+|||+++++ +.||+|++||+.++... ..+..+ ......|.+++|||||++|++++.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~-------------~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTST-------------VLIEGK-KIESLRAIRYEISPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE-------------EEECTT-TTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE-------------EEeccc-cccccccceEEECCCCCEEEEEecCcc
Confidence 677899999998877 78999999999876421 111111 0111248999999999999999875
Q ss_pred -------CeEEEEECCCceeEeec---CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe-----
Q 010794 234 -------GQARIWSTNGDLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT----- 298 (501)
Q Consensus 234 -------g~i~iw~~~~~~~~~~~---~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~----- 298 (501)
+.+++|++.+.....+. .|...+..++|+|+|++|+.++. +.|++||+.+++.......+...+
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~ 162 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGL 162 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEE
T ss_pred ceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcc
Confidence 78889998765444343 34445889999999999998885 799999999887766554433322
Q ss_pred -------------EEEecCCC-ceEEEecCC----------------------------------CeEEEEEcCCCccee
Q 010794 299 -------------LDVDWRNN-VSFATSSTD----------------------------------NMIYVCKIGENRPIK 330 (501)
Q Consensus 299 -------------~~~~~~~~-~~~~~~~~d----------------------------------~~i~~~~~~~~~~~~ 330 (501)
..+.|.++ ..++.++.+ ..|++|++..+....
T Consensus 163 ~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~ 242 (723)
T 1xfd_A 163 SDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL 242 (723)
T ss_dssp CCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE
T ss_pred cceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE
Confidence 56788655 345554432 278999998877555
Q ss_pred eecCC------CCceeEEEEcCCCCEEEEEeC----CCeEEEEeCCCCceeeecccC-CCCE----EEEEEcCCCCCCCC
Q 010794 331 TFAGH------QGEVNCVKWDPTGSLLASCSD----DVTAKIWNMKQDKYVHDLREH-SKEI----YTIRWSPTGSGTNN 395 (501)
Q Consensus 331 ~~~~h------~~~v~~v~~~~~~~~l~s~s~----Dg~i~iwd~~~~~~~~~~~~~-~~~v----~~i~~~p~g~~~~~ 395 (501)
.+..+ ...+.+++|+|||++|++.+. +..|++||+.+++....+..+ ...+ ..++|+|+|..
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~--- 319 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRK--- 319 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCS---
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCe---
Confidence 55544 567899999999999877653 357999999988766554332 2333 37899999862
Q ss_pred CCCcEEEEEEeCCC------eEEEEe-CCCCe--EEEEeeCCCCCeEE-EEECCCCCEEEEEeCC---CcEEEEeCCCC-
Q 010794 396 PNQQLILASASFDS------TVKLWD-VELGK--LLYSLNGHREPVYS-LAFSPTGEYLASGSLD---KSMHIWSLKEG- 461 (501)
Q Consensus 396 ~~~~~~l~sgs~dg------~i~iwd-~~~~~--~~~~~~~h~~~v~~-l~~spdg~~lasgs~D---g~i~iw~~~~~- 461 (501)
++++++..++ .|.+|| ...+. +...+..+...+.. ++|||||++|+..+.+ +.+++|++...
T Consensus 320 ----l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 320 ----FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp ----EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred ----EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 2333366777 577777 34443 14455544444554 6999999999866655 78999998642
Q ss_pred -eeEEEEec----CCCEEEEEECCCCCEEEEEEC
Q 010794 462 -KIVKTYTG----NGGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 462 -~~~~~~~~----~~~i~~~~ws~~g~~la~~~~ 490 (501)
.....+.. ...+..++|+|||++||....
T Consensus 396 ~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 396 NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred CCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 12333332 345789999999998887643
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=4e-23 Score=199.79 Aligned_cols=268 Identities=13% Similarity=0.135 Sum_probs=209.8
Q ss_pred CCeEEEEECCCCCEEEEEeC-------CCeEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCC
Q 010794 213 KDVTTLDWNGEGTLLATGSY-------DGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVK 283 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~-------dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~ 283 (501)
..+..++|+|+++++++++. ++.|.+||.... ....+.. ...+.+++|+|++++++ ++..++.|.+||+.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 45789999999999888874 568999998654 3344433 34467899999999665 45557999999999
Q ss_pred CcceeEeeeeccCC---------eEEEecCC--CceEEEe-cCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE
Q 010794 284 TEEWKQQFEFHSGP---------TLDVDWRN--NVSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL 351 (501)
Q Consensus 284 ~~~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l 351 (501)
+++....+..+... +..+.|.+ ...+++. ..++.|++|+..+.+.+..+..+...+.+++|+|+++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 99887777664322 45566643 3344444 458899999999888888877566678899999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeccc----CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010794 352 ASCSDDVTAKIWNMKQDKYVHDLRE----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG 427 (501)
Q Consensus 352 ~s~s~Dg~i~iwd~~~~~~~~~~~~----~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 427 (501)
++++.++.|.+||..+++.+..+.. +...+..++|+|++. .++++...++.|.+||+.+++.+..+..
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--------~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ--------RAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT--------EEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC--------EEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 9999999999999999888766654 445678899999986 3455555669999999999998887765
Q ss_pred CCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010794 428 HREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 428 h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d 491 (501)
.. + ..++|+|+|++|+.++ .++.|.+||+.+++++..+.....+.+++|+|+|++|+++..+
T Consensus 272 ~~-~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 272 PE-S-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SS-C-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CC-C-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 43 2 5799999999665555 7899999999999999888877788999999999977766554
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=2.1e-23 Score=200.14 Aligned_cols=270 Identities=11% Similarity=0.111 Sum_probs=197.6
Q ss_pred ECCCCC-EEEEEeCCCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEec-CCeEEEEeCCCcce-eEeeeecc
Q 010794 220 WNGEGT-LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEW-KQQFEFHS 295 (501)
Q Consensus 220 ~s~~~~-~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-D~~i~iwd~~~~~~-~~~~~~~~ 295 (501)
|.+++. .+++++.++.|++||... .....+..+..++ .++|+|+++++++++. ++.|.+||+.+++. ...+..+.
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 444444 577888899999999864 4445555566666 9999999997776665 89999999999887 66666666
Q ss_pred CCeEEEecCCCc-eEEEecCC-C--eEEEEEcCCCcceeeecCCCCceeEEEEcCCCCE-EEEEeCCCe-EEEEeCCCCc
Q 010794 296 GPTLDVDWRNNV-SFATSSTD-N--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDDVT-AKIWNMKQDK 369 (501)
Q Consensus 296 ~~~~~~~~~~~~-~~~~~~~d-~--~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~Dg~-i~iwd~~~~~ 369 (501)
.+...+.|.++. .++++..+ + .|++|++..++.+..+..+ ....+++|+|+|++ ++++..++. |.+|++....
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 665547776543 34444444 3 8999999988887776644 34689999999985 555566688 9999987544
Q ss_pred eee----ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEeeCCCCCeEEEEECCCCC
Q 010794 370 YVH----DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSLNGHREPVYSLAFSPTGE 442 (501)
Q Consensus 370 ~~~----~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~spdg~ 442 (501)
.+. ...........++|+|+|. .+++++..++.|++||+.+++. +..+..+ ..+..++|+|+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~spdg~--------~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~ 233 (331)
T 3u4y_A 163 VLFDTGQEFISGGTRPFNITFTPDGN--------FAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGS 233 (331)
T ss_dssp CEEEEEEEEECSSSSEEEEEECTTSS--------EEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSS
T ss_pred cEeecCCccccCCCCccceEECCCCC--------EEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCC
Confidence 331 1123345678999999985 3556666789999999998887 7777654 5678999999999
Q ss_pred EEEEEe-CCCcEEEEeCCCCee--EEEEecC--------CCEEEEEECCCCCEEEEEE-CCCeEEEEEee
Q 010794 443 YLASGS-LDKSMHIWSLKEGKI--VKTYTGN--------GGIFEVCWNKEGDKIAACF-ANHTVCVLDFR 500 (501)
Q Consensus 443 ~lasgs-~Dg~i~iw~~~~~~~--~~~~~~~--------~~i~~~~ws~~g~~la~~~-~d~~v~v~~~~ 500 (501)
+|+.++ .++.|.+||+.++++ +..+... .....++|+|+|++|+++. .++.|.|||+.
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 776654 578899999999987 4444322 1234589999999887655 46799999974
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.3e-24 Score=231.89 Aligned_cols=277 Identities=13% Similarity=0.107 Sum_probs=207.7
Q ss_pred CCCeEEEEECCCCCEEEEEeC-CC-----eEEEEECCCce-eEeecCCCC------------------------CEEEEE
Q 010794 212 SKDVTTLDWNGEGTLLATGSY-DG-----QARIWSTNGDL-KCTLSKHKG------------------------PIFSLK 260 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~-dg-----~i~iw~~~~~~-~~~~~~h~~------------------------~V~~l~ 260 (501)
...|.+++|||||++|++++. |+ .|++|++.+.. ...+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 99999987543 333333322 378899
Q ss_pred ecCCCCEEEEEecCCeEEEEeCCCcc--eeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCc
Q 010794 261 WNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE 338 (501)
Q Consensus 261 ~~~~~~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~ 338 (501)
|+|+|++|++++. ++|++||+.++. ....+..+...+..+.|.++...+....++.|++|++..+........+...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc
Confidence 9999999999886 999999998872 3344555667788889987665444444679999999887665554444332
Q ss_pred ----------------eeEEEEcCCCCEEEEEeCCC---------------------------------eEEEEeCCC-C
Q 010794 339 ----------------VNCVKWDPTGSLLASCSDDV---------------------------------TAKIWNMKQ-D 368 (501)
Q Consensus 339 ----------------v~~v~~~~~~~~l~s~s~Dg---------------------------------~i~iwd~~~-~ 368 (501)
+.+++|+|||++|++++.|+ .|++||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 47899999999999988765 789999988 7
Q ss_pred ceeeecc--cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe-----CCCeEEEEeCCCCeEEEEeeCCCC----CeEEEEE
Q 010794 369 KYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASAS-----FDSTVKLWDVELGKLLYSLNGHRE----PVYSLAF 437 (501)
Q Consensus 369 ~~~~~~~--~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs-----~dg~i~iwd~~~~~~~~~~~~h~~----~v~~l~~ 437 (501)
+...... .+...+..++| |+|. .|+.++ .+..|++||+.+++....+..+.. .+.+++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~---------~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQ---------HLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETT---------EEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCC---------EEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 6544332 36678899999 9986 444443 357899999999988776665543 4568999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEec-CCCEEEE-EECCCCCEEEEEEC-CC--eEEEEEee
Q 010794 438 SPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTG-NGGIFEV-CWNKEGDKIAACFA-NH--TVCVLDFR 500 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~-~~~i~~~-~ws~~g~~la~~~~-d~--~v~v~~~~ 500 (501)
+|||+++++++.||.++||.+. +++ ...+.. ...+..+ +|+|+|+.|++.+. ++ .+.||++.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 9999999999999988888765 344 555544 4457777 59999998875544 44 88999874
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.1e-24 Score=202.81 Aligned_cols=253 Identities=16% Similarity=0.201 Sum_probs=190.9
Q ss_pred EEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCC-cceeEeeeecc-CCeEEEecCCC
Q 010794 229 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHS-GPTLDVDWRNN 306 (501)
Q Consensus 229 sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~-~~~~~~~~~~~ 306 (501)
+++.++.|++|+........+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+. ..+.++.|.++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 45678999999998776667778999999999999999999886 88999999998 77666554442 45667777654
Q ss_pred -ceEEEec--C--CCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEE-EEeCCCeEEEEeCCC-CceeeecccCCC
Q 010794 307 -VSFATSS--T--DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQ-DKYVHDLREHSK 379 (501)
Q Consensus 307 -~~~~~~~--~--d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~Dg~i~iwd~~~-~~~~~~~~~~~~ 379 (501)
..++.++ . ...|+.++..... ...+..+. .+.+++|+|++++|+ +++.++.++||++.. ......+..+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 4455555 2 3456666655544 33444333 488999999999877 788899999998632 233455666778
Q ss_pred CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCC--------
Q 010794 380 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD-------- 450 (501)
Q Consensus 380 ~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D-------- 450 (501)
.+.+++|+|++. .+++++..++.++||++. .+..+..+..|...+.+++|+|+|++|++++.+
T Consensus 174 ~~~~~~~s~dg~--------~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 174 RNDGPDYSPDGR--------WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CEEEEEECTTSS--------EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ccccceECCCCC--------EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 899999999986 244445568999999886 455667788888889999999999999988866
Q ss_pred ---CcEEEEeCCCCeeEEE--E-ecCCCEEEEEECCCCCEEEEEECCC
Q 010794 451 ---KSMHIWSLKEGKIVKT--Y-TGNGGIFEVCWNKEGDKIAACFANH 492 (501)
Q Consensus 451 ---g~i~iw~~~~~~~~~~--~-~~~~~i~~~~ws~~g~~la~~~~d~ 492 (501)
+.|++|++.+++.... + .+...+..++|+|+|++|++++.+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999998865333 3 2345688999999999999887653
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.1e-23 Score=200.68 Aligned_cols=291 Identities=11% Similarity=0.166 Sum_probs=196.3
Q ss_pred EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC-CeEEEEECC--C
Q 010794 167 LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD-GQARIWSTN--G 243 (501)
Q Consensus 167 ~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d-g~i~iw~~~--~ 243 (501)
++++++.|+.|++|++..... .. .+... .+...+.+++|+|+|++|++++.+ +.|++|++. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~--------~~--~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~ 71 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGA--------LT--LTQVV-----DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD 71 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC--------EE--EEEEE-----ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEeCCCCCeEEEEEECCCCc--------EE--EeeeE-----ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC
Confidence 444557899999999853110 11 11111 124568889999999999998887 999999986 3
Q ss_pred ce---eEeecCCCCCEEEEEecCCCCEEEEEec-CCeEEEEeCC---CcceeEeeeeccCCeEEEecCCCc--eEEEecC
Q 010794 244 DL---KCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVK---TEEWKQQFEFHSGPTLDVDWRNNV--SFATSST 314 (501)
Q Consensus 244 ~~---~~~~~~h~~~V~~l~~~~~~~~l~s~s~-D~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 314 (501)
.. ...+..+. .+..++|+|++++|++++. ++.|.+||+. +......+..+ ..+..+.|.++. .++++..
T Consensus 72 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 72 GALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp CCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGG
T ss_pred CceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCC
Confidence 22 22344333 7789999999998876665 8899999994 33333333322 335566665443 3444448
Q ss_pred CCeEEEEEcCC-Cccee----eecC-CCCceeEEEEcCCCCEEE-EEeCCCeEEEEeCCC--Cce--eeecc---cC---
Q 010794 315 DNMIYVCKIGE-NRPIK----TFAG-HQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQ--DKY--VHDLR---EH--- 377 (501)
Q Consensus 315 d~~i~~~~~~~-~~~~~----~~~~-h~~~v~~v~~~~~~~~l~-s~s~Dg~i~iwd~~~--~~~--~~~~~---~~--- 377 (501)
++.|++|++.. ++... .+.. ....+.+++|+|++++++ ++..++.|.+|++.. +.. ...+. ..
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 89999999987 43321 2222 234688999999999765 445899999999953 332 22221 11
Q ss_pred CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--C--CeEEEEeeCCCCCeEEEEECCCCCEEEEEe-CCCc
Q 010794 378 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--L--GKLLYSLNGHREPVYSLAFSPTGEYLASGS-LDKS 452 (501)
Q Consensus 378 ~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--~--~~~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~ 452 (501)
...+..++|+|++. .+++++..++.|++|++. . .+.+..+..+.. +.+++|+|+|++|++++ .++.
T Consensus 230 ~~~~~~i~~s~dg~--------~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 230 TRWAADIHITPDGR--------HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp CCCEEEEEECTTSS--------EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE
T ss_pred cCCccceEECCCCC--------EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe
Confidence 23566899999885 355567789999999998 2 345555655544 88999999999888887 6899
Q ss_pred EEEE--eCCCCee--EEEEecCCCEEEEEECCCCC
Q 010794 453 MHIW--SLKEGKI--VKTYTGNGGIFEVCWNKEGD 483 (501)
Q Consensus 453 i~iw--~~~~~~~--~~~~~~~~~i~~~~ws~~g~ 483 (501)
|.+| +..+|++ +..+.......+++|.|+-+
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred EEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 9999 5556654 44555545577888887654
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=2.5e-23 Score=199.55 Aligned_cols=276 Identities=8% Similarity=0.054 Sum_probs=196.1
Q ss_pred EECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeC-CCeEE
Q 010794 160 AWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY-DGQAR 237 (501)
Q Consensus 160 ~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~-dg~i~ 237 (501)
.|.+++. .+++++.++.|++||+.++... .... .+...+ +++|+|+|+++++++. ++.|+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-------------~~~~----~~~~~~-~~~~s~dg~~l~~~~~~~~~i~ 65 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL-------------NQIT----LGYDFV-DTAITSDCSNVVVTSDFCQTLV 65 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEE-------------EEEE----CCCCEE-EEEECSSSCEEEEEESTTCEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccccee-------------eeEE----ccCCcc-eEEEcCCCCEEEEEeCCCCeEE
Confidence 4666655 5778889999999998876421 1111 113445 9999999997776665 89999
Q ss_pred EEECCCc-e-eEeecCCCCCEEEEEecCCCCEEEEEecCC---eEEEEeCCCcceeEeeeeccCCeEEEecCCC--ceEE
Q 010794 238 IWSTNGD-L-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDK---TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN--VSFA 310 (501)
Q Consensus 238 iw~~~~~-~-~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 310 (501)
+|+.... . ...+..+..++.+++|+|++++|+++..++ .|.+||+.+++....+..+. ....+.|.++ ..++
T Consensus 66 ~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 66 QIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLIL 144 (331)
T ss_dssp EEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEE
T ss_pred EEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEE
Confidence 9998654 3 556666777766699999999999655553 89999999998877766543 3467777654 3556
Q ss_pred EecCCCe-EEEEEcCCCccee----eecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCce---eeecccCCCCE
Q 010794 311 TSSTDNM-IYVCKIGENRPIK----TFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKY---VHDLREHSKEI 381 (501)
Q Consensus 311 ~~~~d~~-i~~~~~~~~~~~~----~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~~~~~---~~~~~~~~~~v 381 (501)
+...++. +.+|++.....+. ........+.+++|+|+|+++ +++..++.|++||+.+++. +..+.. ...+
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~ 223 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLP 223 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCC
T ss_pred EecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCC
Confidence 6666677 9999987544331 111334457899999999955 5556789999999998887 666653 3566
Q ss_pred EEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCC----CC---CeEEEEECCCCCEEEEEe-CCC
Q 010794 382 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGH----RE---PVYSLAFSPTGEYLASGS-LDK 451 (501)
Q Consensus 382 ~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h----~~---~v~~l~~spdg~~lasgs-~Dg 451 (501)
..++|+|+|. .++++...++.|.+||+.+++. +..+..+ .. .+..++|+|+|++|++++ .++
T Consensus 224 ~~~~~spdg~--------~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 295 (331)
T 3u4y_A 224 GTIVVSRDGS--------TVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR 295 (331)
T ss_dssp CCEEECTTSS--------EEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT
T ss_pred ceEEECCCCC--------EEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCC
Confidence 7899999986 3445555688899999999887 4444322 22 235689999999886655 567
Q ss_pred cEEEEeCCCCee
Q 010794 452 SMHIWSLKEGKI 463 (501)
Q Consensus 452 ~i~iw~~~~~~~ 463 (501)
.|.+|++.+..+
T Consensus 296 ~v~v~d~~~~~~ 307 (331)
T 3u4y_A 296 ELKVFTISGKVV 307 (331)
T ss_dssp EEEEEETTSCEE
T ss_pred cEEEEEecCCcc
Confidence 999999987654
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.6e-23 Score=201.54 Aligned_cols=265 Identities=11% Similarity=0.197 Sum_probs=188.6
Q ss_pred EEEEEeCCCeEEEEECC--Cce-eEeecCCCCCEEEEEecCCCCEEEEEecC-CeEEEEeCC--Cccee--EeeeeccCC
Q 010794 226 LLATGSYDGQARIWSTN--GDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCD-KTAIVWDVK--TEEWK--QQFEFHSGP 297 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~--~~~-~~~~~~h~~~V~~l~~~~~~~~l~s~s~D-~~i~iwd~~--~~~~~--~~~~~~~~~ 297 (501)
++++++.++.|++|+.. +.. ......|...+.+++|+|++++|++++.+ +.|.+|++. ++... ..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 44555789999999985 322 22233577788999999999999988886 999999987 55533 3333333 5
Q ss_pred eEEEecCCCc--eEEEecCCCeEEEEEcC---CCcceeeecCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEeCCC-Cce
Q 010794 298 TLDVDWRNNV--SFATSSTDNMIYVCKIG---ENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQ-DKY 370 (501)
Q Consensus 298 ~~~~~~~~~~--~~~~~~~d~~i~~~~~~---~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~~~-~~~ 370 (501)
+..+.|.++. .++++..++.|.+|++. ....+..+..+ ..+.+++|+|+++++++++ .++.|++||+.+ ++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 5667776543 34555668999999994 33344444433 3588999999999887777 899999999987 543
Q ss_pred ee----eccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--CeE--EEEee----CC--CCCeEEE
Q 010794 371 VH----DLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--GKL--LYSLN----GH--REPVYSL 435 (501)
Q Consensus 371 ~~----~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~--~~~~~----~h--~~~v~~l 435 (501)
.. .+.. ....+..++|+|++. .+++++..++.|++|++.. ++. ...+. ++ ...+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~--------~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQ--------YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSS--------EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred eeecccccccCCCCCcceEEECCCCC--------EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 22 2222 234678899999885 3455666899999999953 432 22222 11 2357789
Q ss_pred EECCCCCEEE-EEeCCCcEEEEeCC--CC--eeEEEEecCCCEEEEEECCCCCEEEEEE-CCCeEEEEEee
Q 010794 436 AFSPTGEYLA-SGSLDKSMHIWSLK--EG--KIVKTYTGNGGIFEVCWNKEGDKIAACF-ANHTVCVLDFR 500 (501)
Q Consensus 436 ~~spdg~~la-sgs~Dg~i~iw~~~--~~--~~~~~~~~~~~i~~~~ws~~g~~la~~~-~d~~v~v~~~~ 500 (501)
+|+|+|++|+ +++.++.|.+|++. ++ +.+..+.....+..++|+|+|++|+++. .++.|.||++.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9999998887 45579999999998 33 4455565555688999999999888887 68999999764
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.4e-23 Score=197.20 Aligned_cols=241 Identities=19% Similarity=0.287 Sum_probs=178.7
Q ss_pred CceEEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCC-CCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC
Q 010794 144 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIAD-GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 222 (501)
Q Consensus 144 ~~~~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~ 222 (501)
.....+..|...|.+++|+|+|++|++++ ++.|++||+.+ +.... .... .+...|.+++|+|
T Consensus 32 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~-------------~~~~---~~~~~~~~~~~sp 94 (297)
T 2ojh_A 32 RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK-------------VDTG---FATICNNDHGISP 94 (297)
T ss_dssp TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE-------------CCCT---TCCCBCSCCEECT
T ss_pred CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE-------------eccc---cccccccceEECC
Confidence 33455667899999999999999999987 88999999976 53210 0101 1235688999999
Q ss_pred CCCEEEEEeC--CCeEEEE--ECCCceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeeccCC
Q 010794 223 EGTLLATGSY--DGQARIW--STNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGP 297 (501)
Q Consensus 223 ~~~~l~sg~~--dg~i~iw--~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 297 (501)
+|++|++++. ++.++|| +..+.....+..+. .+..++|+|++++|+ +++.++.+++|++....
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~----------- 162 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS----------- 162 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTT-----------
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCC-----------
Confidence 9999999993 3455555 55554444554443 489999999999887 78889999999753211
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEeCC-CCceeeecc
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMK-QDKYVHDLR 375 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~~-~~~~~~~~~ 375 (501)
.....+..|...+.+++|+|++++|+.++ .++.++||++. .+..+..+.
T Consensus 163 -----------------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 163 -----------------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp -----------------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred -----------------------------CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 01122344667789999999999887666 58999999886 455566777
Q ss_pred cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----------CeEEEEeCCCCeE--EEEeeCCCCCeEEEEECCCCC
Q 010794 376 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----------STVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGE 442 (501)
Q Consensus 376 ~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----------g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~ 442 (501)
.+...+..++|+|++. +|++++.+ +.|++||+.+++. +..+.+|...|.+++|+|+|+
T Consensus 214 ~~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGD---------KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp CCSEEEEEEEECTTSS---------EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred cCCcccCCeEECCCCC---------EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCC
Confidence 7778899999999986 55555544 5699999988754 455557888999999999999
Q ss_pred EEEEEeCCC
Q 010794 443 YLASGSLDK 451 (501)
Q Consensus 443 ~lasgs~Dg 451 (501)
+|++++.+.
T Consensus 285 ~l~~~~~~~ 293 (297)
T 2ojh_A 285 EFAYVRYFP 293 (297)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 998887653
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=2.9e-23 Score=220.28 Aligned_cols=278 Identities=10% Similarity=0.100 Sum_probs=200.9
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
..|.+++|||| +.++.+ .|+.|++||+.++.. ..+. .+...+.+++|||||++|+++ .+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~--------------~~l~----~~~~~~~~~~~SpdG~~la~~-~~ 140 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKV--------------TYLF----DTNEETASLDFSPVGDRVAYV-RN 140 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEE--------------EEEE----CCTTCCTTCEECTTSSEEEEE-ET
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCce--------------EEcc----CCcccccCCcCCCCCCEEEEE-EC
Confidence 57999999999 655544 359999999876531 1111 123457889999999999995 68
Q ss_pred CeEEEEECCC-----ceeEe-ecCCCCC--------------EEEEEecCCCCEEEEEe---------------------
Q 010794 234 GQARIWSTNG-----DLKCT-LSKHKGP--------------IFSLKWNKKGDYLLTGS--------------------- 272 (501)
Q Consensus 234 g~i~iw~~~~-----~~~~~-~~~h~~~--------------V~~l~~~~~~~~l~s~s--------------------- 272 (501)
+.|++|++.+ ..... ...+... +.++.|+|+|++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 9999999865 43332 3333332 47899999999999987
Q ss_pred ------------cCCeEEEEeCCCcceeEeee--eccCCeEEEecCCCc-eEEEecCCC-----eEEEEEcCCCcceeee
Q 010794 273 ------------CDKTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNNV-SFATSSTDN-----MIYVCKIGENRPIKTF 332 (501)
Q Consensus 273 ------------~D~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~d~-----~i~~~~~~~~~~~~~~ 332 (501)
.+..|++||+.+++...... .+...+..+.|.++. .+++++.++ .|++|+..++.....+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 45789999999887654432 244557788887654 455555444 8999999887333333
Q ss_pred c--CCCC---ceeEEEEcC--CCCEEEEEeCCCeEEEEeCC-CCceeeecccCCCCEEE-EEEcCCCCCCCCCCCcEEEE
Q 010794 333 A--GHQG---EVNCVKWDP--TGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILA 403 (501)
Q Consensus 333 ~--~h~~---~v~~v~~~~--~~~~l~s~s~Dg~i~iwd~~-~~~~~~~~~~~~~~v~~-i~~~p~g~~~~~~~~~~~l~ 403 (501)
. .+.. .+.+++|+| +|+++++++.|+.++||.+. .+..+..+..+...+.. ++|+|++. .+++
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~--------~l~~ 372 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGT--------RLYF 372 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSS--------EEEE
T ss_pred EEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCC--------EEEE
Confidence 2 2222 346789999 99999999999999999876 56666777777777876 79999985 3555
Q ss_pred EEeCCC----eEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCC----CcEEEEeCCCCe
Q 010794 404 SASFDS----TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD----KSMHIWSLKEGK 462 (501)
Q Consensus 404 sgs~dg----~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D----g~i~iw~~~~~~ 462 (501)
+++.++ .|..||+.+++ +..+. |...+.+++|||||++|+.++.+ +.|++|++.+++
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 566655 67777877765 34444 66779999999999988876433 569999998887
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=7e-24 Score=219.86 Aligned_cols=266 Identities=14% Similarity=0.099 Sum_probs=200.7
Q ss_pred CCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCceeEeecCCC-CCEEEEEecCCCCEEEEEec---CCeEEEEeCCC--
Q 010794 212 SKDVTTLDWNGEGTLLATGSY-DGQARIWSTNGDLKCTLSKHK-GPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKT-- 284 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~-dg~i~iw~~~~~~~~~~~~h~-~~V~~l~~~~~~~~l~s~s~---D~~i~iwd~~~-- 284 (501)
..+|.+++|+|||++|++++. ||+++||++.+.....+..|. ..|..++|+|+ +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 346999999999999999887 999999998777666676666 68999999999 67777665 55566665433
Q ss_pred -cceeEeeeec-cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCC----C
Q 010794 285 -EEWKQQFEFH-SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD----V 358 (501)
Q Consensus 285 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D----g 358 (501)
+... .+... ...+.++.+..+..++++..++.+.+|++.++........+. .+++|+|||++|++++.+ +
T Consensus 100 ~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 22111 112334455555444444444455599998776554443332 789999999999988877 7
Q ss_pred eEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCeEEEE
Q 010794 359 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLA 436 (501)
Q Consensus 359 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~ 436 (501)
.|++||+.+++.. .+..+...+..++|+|+|. .|++++.++ .|++||+.+++.. .+.+|...+..++
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~---------~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMK---------VTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSC---------EEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCC---------EEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 8999999887754 5677888899999999997 677888888 8999999998887 7777877777777
Q ss_pred --------ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCe---EEEEE
Q 010794 437 --------FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHT---VCVLD 498 (501)
Q Consensus 437 --------~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~---v~v~~ 498 (501)
|+|||.++++++.|+++++|++ |+.... ..+.+.+++|+ +|+.+++++.+.+ |.++|
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~--~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA--PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC--CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc--CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999998999999999999999 776552 23568899999 9999888877654 55554
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=4e-24 Score=227.55 Aligned_cols=275 Identities=13% Similarity=0.173 Sum_probs=198.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeecCCCC---CEEEEEecCCCCEEEEEecC---------CeEEEE
Q 010794 214 DVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKG---PIFSLKWNKKGDYLLTGSCD---------KTAIVW 280 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~---~V~~l~~~~~~~~l~s~s~D---------~~i~iw 280 (501)
.+.+++|+|||+++++ +.||.|++|+..+ .....+..|.. .|.+++|+|+|++|++++.+ +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3678899999998776 7899999999864 34445556654 48999999999999999875 788899
Q ss_pred eCCCcceeEeeee---ccCCeEEEecCCCc-eEEEecCCCeEEEEEcCCCcceeeecCCCCce-----------------
Q 010794 281 DVKTEEWKQQFEF---HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEV----------------- 339 (501)
Q Consensus 281 d~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v----------------- 339 (501)
|+.+++. ..+.. +...+..+.|.++. .++.++. +.|++|++..+...+....+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9998875 23322 22236667787654 4555444 799999998877766655544333
Q ss_pred -eEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeCCCCceeeecccC------C
Q 010794 340 -NCVKWDPTGSLLASCSDDV----------------------------------TAKIWNMKQDKYVHDLREH------S 378 (501)
Q Consensus 340 -~~v~~~~~~~~l~s~s~Dg----------------------------------~i~iwd~~~~~~~~~~~~~------~ 378 (501)
.+++|+|||++|++++.|+ .|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 7899999999999987653 7999999888765555543 5
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEe----CCCeEEEEeCCCCeEEEEeeC-CCCCeE----EEEECCCCCEEEE--E
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASAS----FDSTVKLWDVELGKLLYSLNG-HREPVY----SLAFSPTGEYLAS--G 447 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs----~dg~i~iwd~~~~~~~~~~~~-h~~~v~----~l~~spdg~~las--g 447 (501)
..+..++|+|+|. +|++.+ .+..|++||+.++++...+.. +...+. .++|||||++|+. +
T Consensus 255 ~~~~~~~~SpDg~---------~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 255 YYITMVKWATSTK---------VAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp EEEEEEEESSSSE---------EEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred ceeEEEEEeCCCe---------EEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 6789999999985 454543 235799999999887665543 334443 7899999998775 4
Q ss_pred eCCC------cEEEEe-CCCCe--eEEEEe-cCCCEEE-EEECCCCCEEEEEECC---CeEEEEEee
Q 010794 448 SLDK------SMHIWS-LKEGK--IVKTYT-GNGGIFE-VCWNKEGDKIAACFAN---HTVCVLDFR 500 (501)
Q Consensus 448 s~Dg------~i~iw~-~~~~~--~~~~~~-~~~~i~~-~~ws~~g~~la~~~~d---~~v~v~~~~ 500 (501)
..++ .|.+|+ ..++. ....+. +...+.. ++|+|||+.|++.+.+ +.+.||++.
T Consensus 326 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp ECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 5677 577777 34444 133443 3344554 6999999999877665 788999874
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.3e-22 Score=194.69 Aligned_cols=270 Identities=13% Similarity=0.093 Sum_probs=195.5
Q ss_pred CEEEEEeCCCeEEEEECCCc-eeEeecC-CCC-CEEEEEecCCCCEE-EEEecCCeEEEEeCCCcceeEeeeecc-----
Q 010794 225 TLLATGSYDGQARIWSTNGD-LKCTLSK-HKG-PIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHS----- 295 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~~-~~~~~~~-h~~-~V~~l~~~~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~----- 295 (501)
.+|++++.++.|++||.... ....+.. +.. .+..++|+|+++++ ++++.++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 47899999999999998654 3334432 221 46889999999876 455668899999999988777665422
Q ss_pred CCeEEEecCCCc-eEEEec------------CCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q 010794 296 GPTLDVDWRNNV-SFATSS------------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 362 (501)
Q Consensus 296 ~~~~~~~~~~~~-~~~~~~------------~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~i 362 (501)
..+..+.|.++. .++++. .++.|++|++...+.+..+.. ...+.+++|+|++++|+++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 134456665443 444443 579999999988877766654 3457889999999988877 689999
Q ss_pred EeCCCCceeeecccCCCCEEEEEEcCCCCCCCCC--CCcE---EEEEEeCCC----------eEEEEeCCCCeEE-EEee
Q 010794 363 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNP--NQQL---ILASASFDS----------TVKLWDVELGKLL-YSLN 426 (501)
Q Consensus 363 wd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~--~~~~---~l~sgs~dg----------~i~iwd~~~~~~~-~~~~ 426 (501)
||+.+++.+..+..+... ..+.|+|++...... .... ....+..++ .|.+||+.+++.. ..+.
T Consensus 159 ~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 237 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR 237 (337)
T ss_dssp EETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE
T ss_pred EECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecC
Confidence 999988877655443210 122667776521100 0000 111111222 5899999988764 3345
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 427 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 427 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+.....+.+++|+|+|++|++++.++.|.|||+.
T Consensus 238 ~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred CCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 566778999999999999888 799999999999998888776678999999999999999889999999974
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2.5e-21 Score=187.11 Aligned_cols=271 Identities=10% Similarity=0.040 Sum_probs=202.4
Q ss_pred CccceeEEEECCCCCEEEEEEC-------CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 152 HTSEVCACAWSPAGSLLASGSG-------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 152 H~~~V~~~~~sp~~~~l~sgs~-------D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
....+..++|+|+|++|++++. ++.|.+||..++... ..+.. ...+..++|+++|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~-------------~~~~~-----~~~~~~~~~s~dg 100 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT-------------QAIHN-----DLKPFGATINNTT 100 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE-------------EEEEE-----SSCCCSEEEETTT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE-------------EEEec-----CCCcceEEECCCC
Confidence 4456889999999998888774 568999998765421 11111 2236778999999
Q ss_pred CEEEE-EeCCCeEEEEECCC-ceeEeecCCCC---------CEEEEEecCCCCEEEEEe--cCCeEEEEeCCCcceeEee
Q 010794 225 TLLAT-GSYDGQARIWSTNG-DLKCTLSKHKG---------PIFSLKWNKKGDYLLTGS--CDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 225 ~~l~s-g~~dg~i~iw~~~~-~~~~~~~~h~~---------~V~~l~~~~~~~~l~s~s--~D~~i~iwd~~~~~~~~~~ 291 (501)
++++. +..++.|.+||... .....+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++....+
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 96554 55579999999864 44445544332 268899999999887776 4789999999999888777
Q ss_pred eeccCCeEEEecCC-CceEEEecCCCeEEEEEcCCCcceeeecC----CCCceeEEEEcCCCCEEEEEe-CCCeEEEEeC
Q 010794 292 EFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPTGSLLASCS-DDVTAKIWNM 365 (501)
Q Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~ 365 (501)
..+...+..+.|.+ ...++++..++.+++|+....+.+..+.. +...+.+++|+|++++++.++ .++.|.+||.
T Consensus 181 ~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 181 QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 64444455666643 34566677789999999998887766653 556788999999999766555 4599999999
Q ss_pred CCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEE
Q 010794 366 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA 445 (501)
Q Consensus 366 ~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la 445 (501)
.+++.+..+.... ...++|+|++. .++++...++.|.+||+.+++.+..+... ..+.+++|+|+|++|+
T Consensus 261 ~~~~~~~~~~~~~--~~~~~~s~dg~--------~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~ 329 (353)
T 3vgz_A 261 RNGNILAKVAAPE--SLAVLFNPARN--------EAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLY 329 (353)
T ss_dssp TTCCEEEEEECSS--CCCEEEETTTT--------EEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEE
T ss_pred CCCcEEEEEEcCC--CceEEECCCCC--------EEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEE
Confidence 9988877665433 25688999885 35566667999999999999998887754 4679999999999777
Q ss_pred EEeCCC
Q 010794 446 SGSLDK 451 (501)
Q Consensus 446 sgs~Dg 451 (501)
.+..++
T Consensus 330 v~~~~~ 335 (353)
T 3vgz_A 330 VSVKQK 335 (353)
T ss_dssp EEEECC
T ss_pred EEEccc
Confidence 666553
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=5.3e-22 Score=197.38 Aligned_cols=253 Identities=15% Similarity=0.157 Sum_probs=171.3
Q ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEE----
Q 010794 153 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA---- 228 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~---- 228 (501)
...++.+++++++.+|++|+.|+ +++|+................... ........+...|.+++|+|+|++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVD--KVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEE--CCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccc--cCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 34589999999999999999988 899876432111000000011110 00111122356799999999999999
Q ss_pred EEeCCCeEEEEECCCc------------eeEeecCCCCCEEEEEecCC-CCEEEEEecCCeEEEEeCCCcceeEeeeecc
Q 010794 229 TGSYDGQARIWSTNGD------------LKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 229 sg~~dg~i~iw~~~~~------------~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
+|+.|+.|+||++... ....+.+|...|++++|+|+ +++|++|+.||+|++||++++...
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~------- 185 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV------- 185 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE-------
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce-------
Confidence 8889999999996432 13456779999999999998 789999999999999999875321
Q ss_pred CCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecc
Q 010794 296 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 375 (501)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 375 (501)
....+|...|.+++|+|+|++|++|+.||+|++||.+ +.....+.
T Consensus 186 ----------------------------------~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 186 ----------------------------------CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp ----------------------------------EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred ----------------------------------eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 1223577889999999999999999999999999998 44444443
Q ss_pred cC-------CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCe------EEEEeCCCCe----EE-EEee-------CCCC
Q 010794 376 EH-------SKEIYTIRWSPTGSGTNNPNQQLILASASFDST------VKLWDVELGK----LL-YSLN-------GHRE 430 (501)
Q Consensus 376 ~~-------~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~------i~iwd~~~~~----~~-~~~~-------~h~~ 430 (501)
.+ ...+.+++|++++. +++++++.+|. +++|++++.. .. ..+. +.+.
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~--------~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~ 302 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYV--------FAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQ 302 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTE--------EEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSC
T ss_pred CCcccCCCCceeEEEEEEecCce--------EEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcC
Confidence 32 23789999998763 33444555543 8999998542 11 1111 2233
Q ss_pred CeEEEEECCCCCEEEEEeC-CCcEEEEeC
Q 010794 431 PVYSLAFSPTGEYLASGSL-DKSMHIWSL 458 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~-Dg~i~iw~~ 458 (501)
+-..+.+-++.+++++++. .+.|.|...
T Consensus 303 ~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 303 HHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp CCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred cceeeehhccCCEEEEecCCCCceeEEEe
Confidence 3334444477777665554 445666654
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=8.1e-22 Score=189.08 Aligned_cols=273 Identities=9% Similarity=0.018 Sum_probs=197.3
Q ss_pred CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCC-CeEEEEECCCCCEE-EEEeCCCeEEEEECCC
Q 010794 166 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSK-DVTTLDWNGEGTLL-ATGSYDGQARIWSTNG 243 (501)
Q Consensus 166 ~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~V~~~~~s~~~~~l-~sg~~dg~i~iw~~~~ 243 (501)
.+|++++.++.|++||+.++.. ...+.. +... .+..++|+|+|+++ ++++.++.|.+|+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~-------------~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV-------------DKVITI---ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE-------------EEEEEC---TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcE-------------EEEEEc---CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 4789999999999999876532 111111 1111 36789999999765 4556678999999864
Q ss_pred -ceeEeecC-C----CCCEEEEEecCCCCEEEEEe------------cCCeEEEEeCCCcceeEeeeeccCCeEEEecCC
Q 010794 244 -DLKCTLSK-H----KGPIFSLKWNKKGDYLLTGS------------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 305 (501)
Q Consensus 244 -~~~~~~~~-h----~~~V~~l~~~~~~~~l~s~s------------~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (501)
.....+.. + ...+.+++|+|++++|++++ .++.|.+||+.+++....+.. ...+..+.|.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~ 144 (337)
T 1pby_B 66 GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR 144 (337)
T ss_dssp CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT
T ss_pred CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC
Confidence 33333432 2 12567899999999998886 579999999998887766654 33445566654
Q ss_pred Cc-eEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCC-C-----------------------eE
Q 010794 306 NV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V-----------------------TA 360 (501)
Q Consensus 306 ~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D-g-----------------------~i 360 (501)
+. .++++ ++.|++|++..++.+..+..+... ..+.|+|++..++..+.. + .|
T Consensus 145 dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 145 DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 43 34444 688999999988877666544311 123789999866544432 2 46
Q ss_pred EEEeCCCCcee-eecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECC
Q 010794 361 KIWNMKQDKYV-HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 439 (501)
Q Consensus 361 ~iwd~~~~~~~-~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 439 (501)
.+||+.+++.. ..+..+...+..++|+|++. +|+++ ++.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~---------~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~ 289 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKT---------RAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVST 289 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSS---------EEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECT
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCC---------EEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECC
Confidence 89999888764 22334556788999999986 45555 699999999999988877644 4578999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC
Q 010794 440 TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN 470 (501)
Q Consensus 440 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~ 470 (501)
+|++|++++.++.|++||+.+++.+..+...
T Consensus 290 dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 290 DGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999999999999999999999988877543
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=2.2e-22 Score=214.00 Aligned_cols=314 Identities=12% Similarity=0.066 Sum_probs=212.7
Q ss_pred EEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeC-----
Q 010794 158 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY----- 232 (501)
Q Consensus 158 ~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~----- 232 (501)
.++|+|+|++++++ .|+.|++|++.++... .....+. .....|.+++|||||++|++++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~-------------~~~~~~~-~~~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSY-------------TILSNRT-MKSVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEE-------------EEECHHH-HHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEE-------------EEEcccc-ccccceeeEEECCCCCeEEEEecCceeE
Confidence 67899999766654 6999999999876421 1111110 00124889999999999999876
Q ss_pred ----CCeEEEEECCCcee---EeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee-eeccCCe------
Q 010794 233 ----DGQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPT------ 298 (501)
Q Consensus 233 ----dg~i~iw~~~~~~~---~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~-~~~~~~~------ 298 (501)
++.|++|++.+... ..+ ...+..++|+|+|++|+.++ ++.|++||+.++...+.. ..+...+
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred EeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 78999999876654 223 35688899999999999885 789999999887765432 1111111
Q ss_pred -----------EEEecCCC-ceEEEecCCC----------------------------------eEEEEEcCCCcce---
Q 010794 299 -----------LDVDWRNN-VSFATSSTDN----------------------------------MIYVCKIGENRPI--- 329 (501)
Q Consensus 299 -----------~~~~~~~~-~~~~~~~~d~----------------------------------~i~~~~~~~~~~~--- 329 (501)
..+.|.++ ..++.++.|. .|++|++..+..+
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~ 240 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ 240 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE
T ss_pred ceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee
Confidence 36777655 4455554331 7889998876542
Q ss_pred -----eeecCCCCceeEEEEcCCCCEEEEEeCC----CeEEEEe----CCCCceeeec----ccCCCCEE-----EEEEc
Q 010794 330 -----KTFAGHQGEVNCVKWDPTGSLLASCSDD----VTAKIWN----MKQDKYVHDL----REHSKEIY-----TIRWS 387 (501)
Q Consensus 330 -----~~~~~h~~~v~~v~~~~~~~~l~s~s~D----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~i~~~ 387 (501)
..+.+|...+.+++|+||++++++.... ..|.+|| ..+++....+ ..+...+. .+.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 241 EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEEC
T ss_pred EccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEEC
Confidence 2244688889999999998877775432 2488899 7777665555 35555555 78899
Q ss_pred CCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCC
Q 010794 388 PTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKE 460 (501)
Q Consensus 388 p~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~ 460 (501)
|+|.. ++++++..+| .|.+||+..++ ...+..+...|..+.++ +++.|+..+.+ +.+++|.+..
T Consensus 321 pdg~~-------l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 321 YDAIS-------YYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp TTSSC-------EEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCCCe-------EEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 99862 2333455555 57777887666 45666666678888888 88877766654 8888998753
Q ss_pred --Cee-EEEEe-----cCCCEEEEEECCCCCEEEEEE-CC--CeEEEEEe
Q 010794 461 --GKI-VKTYT-----GNGGIFEVCWNKEGDKIAACF-AN--HTVCVLDF 499 (501)
Q Consensus 461 --~~~-~~~~~-----~~~~i~~~~ws~~g~~la~~~-~d--~~v~v~~~ 499 (501)
+.. ...+. ....+..++|+|+|++++..+ .. ..+.+||+
T Consensus 392 ~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 392 GSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp SSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred CCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 421 22332 223578899999999777543 32 35666664
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=7.5e-21 Score=183.66 Aligned_cols=249 Identities=11% Similarity=0.143 Sum_probs=171.6
Q ss_pred CCeEEEEECCCCCEEEEEeC---CCeEEEEECCCce---eEeecCCCCCEEEEEecCCCCEEEEEe-cCCeEEEEeCCC-
Q 010794 213 KDVTTLDWNGEGTLLATGSY---DGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKT- 284 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~---dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~s~s-~D~~i~iwd~~~- 284 (501)
..+..++|+|+|+ |++++. ++.|++|++.... ...+..+...+..++|+|+|++|++++ .+++|.+|++..
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 4567899999999 555544 6899999986433 223345677788999999999988887 689999999853
Q ss_pred cceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEe
Q 010794 285 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 364 (501)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd 364 (501)
+... .+.. .......+. ...+...+.+++|+|+|++++++..++.|++|+
T Consensus 119 g~~~-~~~~---------------------------~~~~~~~p~--~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 119 GALT-LTDT---------------------------VQHSGHGPR--PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp SCEE-EEEE---------------------------EECCCCCSS--TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred CCee-ecce---------------------------eecCCCCCC--ccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 2211 1100 000000000 112334688999999999777777899999999
Q ss_pred CC-CCcee--eeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--CeE--EEEeeCCC------C
Q 010794 365 MK-QDKYV--HDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--GKL--LYSLNGHR------E 430 (501)
Q Consensus 365 ~~-~~~~~--~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~--~~~~~~h~------~ 430 (501)
+. ++... ..+.. .......++|+|+|. .+++++..++.|++|++.. ++. +..+.... .
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~--------~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQ--------YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSS--------EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCC--------EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 98 44332 11222 223567899999985 3556667889999999874 543 23333322 3
Q ss_pred CeEEEEECCCCCEE-EEEeCCCcEEEEeCCC-C--eeEEEEecC-CCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010794 431 PVYSLAFSPTGEYL-ASGSLDKSMHIWSLKE-G--KIVKTYTGN-GGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 500 (501)
Q Consensus 431 ~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~-~--~~~~~~~~~-~~i~~~~ws~~g~~la~~~~-d~~v~v~~~~ 500 (501)
.+..++|+|||++| ++...++.|.+|++.. | +.+..+... ..+..++|+|||++|+++.. ++.|.||++.
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 48899999999987 5666789999999872 3 445555543 34789999999998888765 5899999653
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.9e-22 Score=199.22 Aligned_cols=245 Identities=19% Similarity=0.197 Sum_probs=175.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCC------------ceeE----eecCCCCCEEEEEecCCCCEEE----EEe
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG------------DLKC----TLSKHKGPIFSLKWNKKGDYLL----TGS 272 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~------------~~~~----~~~~h~~~V~~l~~~~~~~~l~----s~s 272 (501)
..+..+++++++.++++|+.++ ++||+... .... ....|...|++++|+|++++|+ +|+
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3578899999999999999988 88886421 0000 1123567899999999999999 788
Q ss_pred cCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC-CCEE
Q 010794 273 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLL 351 (501)
Q Consensus 273 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l 351 (501)
.|++|++||+.+..... .... ..-..+..+.+|...|.+++|+|+ +.+|
T Consensus 116 ~d~~v~iwd~~~~~~~~-----~~~~-------------------------~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEA-----KQQK-------------------------RPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp TEEEEEEEEHHHHHCTT-----CSSC-------------------------CCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCceEEEEEccccccCC-----cCCc-------------------------ceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 99999999986541000 0000 000013456689999999999998 7899
Q ss_pred EEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC--
Q 010794 352 ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-- 429 (501)
Q Consensus 352 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-- 429 (501)
++++.||+|++||++++..+.....|...+.+++|+|+|. +|++|+.||.|++||++ ++....+..|.
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~---------~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~ 235 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGK---------QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY 235 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSS---------CEEEEETTSCEEEECTT-CCEEEEECCCTTC
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCC---------EEEEEcCCCcEEEEccC-CcccccccCCccc
Confidence 9999999999999998877666667888999999999986 78999999999999998 66655554442
Q ss_pred -----CCeEEEEECCCCCEEEE-EeCCCc------EEEEeCCCCe-----eEEEEe-------c-CCCEEEEEECCCCCE
Q 010794 430 -----EPVYSLAFSPTGEYLAS-GSLDKS------MHIWSLKEGK-----IVKTYT-------G-NGGIFEVCWNKEGDK 484 (501)
Q Consensus 430 -----~~v~~l~~spdg~~las-gs~Dg~------i~iw~~~~~~-----~~~~~~-------~-~~~i~~~~ws~~g~~ 484 (501)
..|.+++|++++.++++ ++.||. +++|++.+.+ ....+. . ....+.+.+-++.++
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l 315 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDL 315 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTE
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCE
Confidence 37999999999988865 345543 8999998642 111111 1 112234455577776
Q ss_pred EEEEEC-CCeEEEEE
Q 010794 485 IAACFA-NHTVCVLD 498 (501)
Q Consensus 485 la~~~~-d~~v~v~~ 498 (501)
+++++. +..|.|+.
T Consensus 316 ~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 316 VLAASAASTEVSILA 330 (434)
T ss_dssp EEEEETTCSBCEEEE
T ss_pred EEEecCCCCceeEEE
Confidence 666544 45566664
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=9.6e-22 Score=203.78 Aligned_cols=267 Identities=12% Similarity=0.114 Sum_probs=193.2
Q ss_pred ccceeEEEECCCCCEEEEEEC-CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe
Q 010794 153 TSEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~-D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
..+|++++|+|||++||+++. ||+++||++.++.. +.+. ..+...|..++|||| +++++++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~--------------~~lt---~~~~~~~~~~~~spd-~~l~~~~ 82 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET--------------VKLN---REPINSVLDPHYGVG-RVILVRD 82 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE--------------EECC---SSCCSEECEECTTCS-EEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc--------------Eeee---cccccccccccCCCC-eEEEEec
Confidence 557999999999999999887 99999999854321 1111 112246889999999 7888777
Q ss_pred C---CCeEEEE--EC--CCceeEeecCCCCCEEEEEecCCCC--EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEe
Q 010794 232 Y---DGQARIW--ST--NGDLKCTLSKHKGPIFSLKWNKKGD--YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 232 ~---dg~i~iw--~~--~~~~~~~~~~h~~~V~~l~~~~~~~--~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (501)
. +...+|| +. .+... .+..+. .+...+|+|+++ .+++++.+ .+.+||+.+++.......+. .++.
T Consensus 83 ~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~ 156 (582)
T 3o4h_A 83 VSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFV 156 (582)
T ss_dssp CSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEE
T ss_pred cCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEE
Confidence 5 4555665 44 44433 333222 234567888875 34444444 45599999887655444332 4555
Q ss_pred cCC-CceEEEecCC----CeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeeecc
Q 010794 303 WRN-NVSFATSSTD----NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--TAKIWNMKQDKYVHDLR 375 (501)
Q Consensus 303 ~~~-~~~~~~~~~d----~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~~ 375 (501)
|.+ ...++.++.+ ..|++|++.++... .+.+|.+.+..++|+|||++|+++..++ .|++||+.+++.. .+.
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 643 4445545544 67999998876654 6778888999999999999999888999 8999999988877 666
Q ss_pred cCCCCEEEEE--------EcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEE
Q 010794 376 EHSKEIYTIR--------WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG 447 (501)
Q Consensus 376 ~~~~~v~~i~--------~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg 447 (501)
.+...+..+. |+|+|. ++++++.++.+++|++ ++.+. .+...|.+++|+ +|++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~---------~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~ 299 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGR---------LAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSH 299 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSC---------EEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEE
T ss_pred CCCcChhhhhhccccceeEcCCCc---------EEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEE
Confidence 6666666666 999984 7889999999999999 66554 244678999999 99999988
Q ss_pred eCCC---cEEEEeCCC
Q 010794 448 SLDK---SMHIWSLKE 460 (501)
Q Consensus 448 s~Dg---~i~iw~~~~ 460 (501)
+.+. .|.+|+..+
T Consensus 300 s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 300 TSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EETTEEEEEEEETTCC
T ss_pred cCCCCCCeEEEEcCCC
Confidence 8774 477777654
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=6.6e-21 Score=184.06 Aligned_cols=252 Identities=13% Similarity=0.154 Sum_probs=173.4
Q ss_pred CCccceeEEEECCCCCEEEEEEC---CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEE
Q 010794 151 GHTSEVCACAWSPAGSLLASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 227 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~---D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l 227 (501)
.+...+..++|+|+|+ |++++. ++.|++|++.++.. ..+... ..+...+..++|+|+|++|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-----------~~~~~~----~~~~~~p~~~a~spdg~~l 100 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-----------HKLNTV----VAPGTPPAYVAVDEARQLV 100 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-----------EEEEEE----EEESCCCSEEEEETTTTEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-----------EEeeee----ecCCCCCEEEEECCCCCEE
Confidence 4556788899999999 555543 68999999865421 111111 1123567889999999998
Q ss_pred EEEe-CCCeEEEEECCC--ce--eEeecC---------CCCCEEEEEecCCCCEEEEEecCCeEEEEeCC-CcceeEeee
Q 010794 228 ATGS-YDGQARIWSTNG--DL--KCTLSK---------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQFE 292 (501)
Q Consensus 228 ~sg~-~dg~i~iw~~~~--~~--~~~~~~---------h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~~ 292 (501)
++++ .++.|.+|++.. .. ...+.. +...+.+++|+|+|+.++++..++.|.+|++. ++.+....
T Consensus 101 ~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~- 179 (347)
T 3hfq_A 101 YSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS- 179 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE-
T ss_pred EEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee-
Confidence 8888 679999999752 21 112211 12348899999999966666778999999987 33321110
Q ss_pred eccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC-CCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCCC--C
Q 010794 293 FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQ--D 368 (501)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~~--~ 368 (501)
.+.. ....+..++|+|||+++ +++..++.|.+|++.. +
T Consensus 180 --------------------------------------~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 180 --------------------------------------VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp --------------------------------------EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred --------------------------------------eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 0011 11245679999999955 4566788999999874 4
Q ss_pred ce--eeecccCC------CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC---CCeEEEEeeCCCCCeEEEEE
Q 010794 369 KY--VHDLREHS------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE---LGKLLYSLNGHREPVYSLAF 437 (501)
Q Consensus 369 ~~--~~~~~~~~------~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~ 437 (501)
+. +..+.... ..+..++|+|+|. .+++++..++.|.+|++. ..+.+..+..+...+..++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~--------~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 293 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGH--------FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDL 293 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSC--------EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCC--------EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEE
Confidence 32 22222222 3478899999986 344677779999999987 23556667766677899999
Q ss_pred CCCCCEEEEEeCC-CcEEEE--eCCCCeeEE
Q 010794 438 SPTGEYLASGSLD-KSMHIW--SLKEGKIVK 465 (501)
Q Consensus 438 spdg~~lasgs~D-g~i~iw--~~~~~~~~~ 465 (501)
+|||++|++++.+ +.|.+| +..+|++..
T Consensus 294 spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 294 DPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 9999999888764 899999 666777653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=5.2e-20 Score=178.79 Aligned_cols=268 Identities=12% Similarity=0.129 Sum_probs=180.0
Q ss_pred CEEEEEeC----CCeEEEEECC---CceeEeecCCCCCEEEEEecCCCCEEEEEecC----CeEEEEeCCC--cceeE--
Q 010794 225 TLLATGSY----DGQARIWSTN---GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKT--EEWKQ-- 289 (501)
Q Consensus 225 ~~l~sg~~----dg~i~iw~~~---~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D----~~i~iwd~~~--~~~~~-- 289 (501)
.+++.|++ ++.|.+|..+ +........+...+..++|+|++++|++++.+ +.|.+|++.. +.+..
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 45566644 5689999753 22222111166677889999999999999886 7999998765 44332
Q ss_pred eeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeee------cC--------CCCceeEEEEcCCCCEEEE-E
Q 010794 290 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF------AG--------HQGEVNCVKWDPTGSLLAS-C 354 (501)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~------~~--------h~~~v~~v~~~~~~~~l~s-~ 354 (501)
....+......+.+.....+++...++.+.+|++.....+..+ .+ +...+.+++|+|+|+++++ +
T Consensus 94 ~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 94 TQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp EEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred EeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe
Confidence 2222334455666633344555567899999998754332211 11 1233578999999996654 4
Q ss_pred eCCCeEEEEeCCCCce------e-------eecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010794 355 SDDVTAKIWNMKQDKY------V-------HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 421 (501)
Q Consensus 355 s~Dg~i~iwd~~~~~~------~-------~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 421 (501)
..++.|++|++..... + ............++|+|+|. .+++++..++.|.+|++.+++.
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~--------~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK--------FAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS--------EEEEEETTTCEEEEEEEETTEE
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC--------EEEEEcCCCCeEEEEEecCCce
Confidence 4588999998875431 1 11122345578899999986 2334444789999999987754
Q ss_pred --EEEee---CCCCCeEEEEECCCCCEEEEEeC--CCcEEEEeCC--CCe--eEEEEecCCCEEEEEECCCCCEEEEEE-
Q 010794 422 --LYSLN---GHREPVYSLAFSPTGEYLASGSL--DKSMHIWSLK--EGK--IVKTYTGNGGIFEVCWNKEGDKIAACF- 489 (501)
Q Consensus 422 --~~~~~---~h~~~v~~l~~spdg~~lasgs~--Dg~i~iw~~~--~~~--~~~~~~~~~~i~~~~ws~~g~~la~~~- 489 (501)
+..+. .+......++|+|||++|+++.. ++.|.+|++. +++ .+..+.....+.+++|+|+|++|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC
Confidence 33332 23345789999999999876665 4899999985 455 344454434578999999999888887
Q ss_pred CCCeEEEEEee
Q 010794 490 ANHTVCVLDFR 500 (501)
Q Consensus 490 ~d~~v~v~~~~ 500 (501)
.++.|.||.+.
T Consensus 326 ~~~~v~v~~~d 336 (361)
T 3scy_A 326 DTNVIQIFERD 336 (361)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCCEEEEEEE
Confidence 67899998664
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=1e-20 Score=185.47 Aligned_cols=310 Identities=12% Similarity=0.085 Sum_probs=188.8
Q ss_pred ceEEccCCccceeE-----EEECCCCCEEEEEEC-CCc--EEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeE
Q 010794 145 DVTILEGHTSEVCA-----CAWSPAGSLLASGSG-DST--ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 216 (501)
Q Consensus 145 ~~~~l~~H~~~V~~-----~~~sp~~~~l~sgs~-D~~--i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 216 (501)
.+..|..|...+.. .+|||||++|+.++. ++. |.+||+.++... .+ ...+...+.
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--------------~l---t~~~~~~~~ 84 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--------------QL---TEGRGDNTF 84 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--------------EC---CCSSCBCSS
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--------------Ee---eeCCCCCcc
Confidence 34566667666655 889999999998887 674 777787655311 11 111222344
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCcee-EeecCCCCCEEEEE--ecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 217 TLDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLK--WNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 217 ~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~--~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
.++|+|||++|+.++.++.|++|++.+... ..+..+...+.... ++|++.+++....++ ..+.. +.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~---------~~~~~-~~- 153 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRR---------EDWVP-LT- 153 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEG---------GGCCC-CC-
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccC---------ccccc-cc-
Confidence 578999999999999999999999876433 33444444443333 478888776422110 00000 00
Q ss_pred ccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEEEeCC------CeEEEEeCC
Q 010794 294 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDD------VTAKIWNMK 366 (501)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~D------g~i~iwd~~ 366 (501)
.+..-..+.....+..|++|++.++... .+..+...+..++|+| ||+.|+.++.+ ..|.++|..
T Consensus 154 --------~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 154 --------DWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp --------SHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred --------ccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 0000000001122345677777665433 3344566788999999 99998887764 367888876
Q ss_pred CCceeeecccCC--CCEEEEEEcCCCCCCCCCCCcEEEEEEeC-CC---eEEEEeCCCCeE--EEEeeCCCCC---eEEE
Q 010794 367 QDKYVHDLREHS--KEIYTIRWSPTGSGTNNPNQQLILASASF-DS---TVKLWDVELGKL--LYSLNGHREP---VYSL 435 (501)
Q Consensus 367 ~~~~~~~~~~~~--~~v~~i~~~p~g~~~~~~~~~~~l~sgs~-dg---~i~iwd~~~~~~--~~~~~~h~~~---v~~l 435 (501)
.+.. ..+..+. ..+..++|+|+|.. ++..+.. .+ .|++||+.+++. +..+.++... ...+
T Consensus 225 ~~~~-~~l~~~~~~~~~~~~~~spdg~~--------l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 295 (388)
T 3pe7_A 225 GTNM-RKVKTHAEGESCTHEFWVPDGSA--------LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGS 295 (388)
T ss_dssp SCCC-EESCCCCTTEEEEEEEECTTSSC--------EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS
T ss_pred CCce-EEeeeCCCCcccccceECCCCCE--------EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCC
Confidence 5543 3333333 35778899999862 3232322 22 399999998874 3334331110 1123
Q ss_pred EECCCCCEEEEE---------eCCCcEEEEeCCCCeeEEEEecCC-----------CEEEEEECCCCCEEEEEEC-CCeE
Q 010794 436 AFSPTGEYLASG---------SLDKSMHIWSLKEGKIVKTYTGNG-----------GIFEVCWNKEGDKIAACFA-NHTV 494 (501)
Q Consensus 436 ~~spdg~~lasg---------s~Dg~i~iw~~~~~~~~~~~~~~~-----------~i~~~~ws~~g~~la~~~~-d~~v 494 (501)
+|+|||++|+.. ..+..|++|++.++++........ .+.+++|+|||+.|+.++. ++..
T Consensus 296 ~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~ 375 (388)
T 3pe7_A 296 LMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKP 375 (388)
T ss_dssp EEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSC
T ss_pred eEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCce
Confidence 799999988753 456789999999987654443333 3678899999998887764 6666
Q ss_pred EEEEee
Q 010794 495 CVLDFR 500 (501)
Q Consensus 495 ~v~~~~ 500 (501)
.||.+.
T Consensus 376 ~l~~~~ 381 (388)
T 3pe7_A 376 ALYLAT 381 (388)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 666543
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.3e-20 Score=181.76 Aligned_cols=274 Identities=11% Similarity=0.050 Sum_probs=187.4
Q ss_pred EEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEE-EEeCCCeE
Q 010794 158 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA-TGSYDGQA 236 (501)
Q Consensus 158 ~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~-sg~~dg~i 236 (501)
++++++++.++++++.++.|++||+.++.. ...+... ....+..++|+|+|++++ ++..++.|
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~-------------~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~~~~i 67 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV-------------YKSCVMP---DKFGPGTAMMAPDNRTAYVLNNHYGDI 67 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE-------------EEEEECS---SCCSSCEEEECTTSSEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE-------------EEEEecC---CCCCCceeEECCCCCEEEEEeCCCCcE
Confidence 457888999999999999999999876532 1111111 112467899999998654 55678999
Q ss_pred EEEECCCc-eeEeecCCC------CCEEEEEecCCCCEEEEEecC------------CeEEEEeCCCcceeE---eeeec
Q 010794 237 RIWSTNGD-LKCTLSKHK------GPIFSLKWNKKGDYLLTGSCD------------KTAIVWDVKTEEWKQ---QFEFH 294 (501)
Q Consensus 237 ~iw~~~~~-~~~~~~~h~------~~V~~l~~~~~~~~l~s~s~D------------~~i~iwd~~~~~~~~---~~~~~ 294 (501)
.+|+.... ....+..+. ..+.+++|+|+|++|++++.+ +.|.+||+.+++... .+..
T Consensus 68 ~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~- 146 (349)
T 1jmx_B 68 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM- 146 (349)
T ss_dssp EEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-
T ss_pred EEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-
Confidence 99998754 333443222 236789999999999998866 899999998854332 2322
Q ss_pred cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCC-C-----------------------ceeEEEEcCCCCE
Q 010794 295 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-G-----------------------EVNCVKWDPTGSL 350 (501)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~-----------------------~v~~v~~~~~~~~ 350 (501)
...+.++.|.++..++.++. .|++|+..+++.+..+..+. . ...++++++++..
T Consensus 147 ~~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 224 (349)
T 1jmx_B 147 PRQVYLMRAADDGSLYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ 224 (349)
T ss_dssp CSSCCCEEECTTSCEEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-----
T ss_pred CCcccceeECCCCcEEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcC
Confidence 23455666754443444433 49999998887766654332 0 2345666655421
Q ss_pred -----------EEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcC-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010794 351 -----------LASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVEL 418 (501)
Q Consensus 351 -----------l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 418 (501)
+.....++.+++|++ ..+...+..++|+| ++. +++++ ++.|.+||+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~sp~dg~---------~l~~~--~~~v~~~d~~~ 284 (349)
T 1jmx_B 225 DPATADLLYGYLSVDLKTGKTHTQEF---------ADLTELYFTGLRSPKDPN---------QIYGV--LNRLAKYDLKQ 284 (349)
T ss_dssp --CCCEEEEEEEEEETTTCCEEEEEE---------EECSSCEEEEEECSSCTT---------EEEEE--ESEEEEEETTT
T ss_pred CccccccceeEEEEeccCCcEEeccc---------ccCCCcceeeEecCCCCC---------EEEEE--cCeEEEEECcc
Confidence 112233344444443 22455778999999 886 45555 88999999999
Q ss_pred CeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC
Q 010794 419 GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG 471 (501)
Q Consensus 419 ~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~ 471 (501)
++.+..+... ..+.+++|+|+|++|++++.++.|++||+.+++.+..+...+
T Consensus 285 ~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 285 RKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp TEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred CeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecCC
Confidence 9988777643 457899999999999888889999999999999888876543
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=2e-20 Score=180.42 Aligned_cols=269 Identities=14% Similarity=0.084 Sum_probs=182.5
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCc-eeEeecCCC-CCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeec
Q 010794 218 LDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHK-GPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFH 294 (501)
Q Consensus 218 ~~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~-~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~ 294 (501)
+++++++.++++++.++.|++||.... ....+..+. ..+..++|+|++++++ ++..++.|.+||+.+++....+...
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 457788899999999999999998654 444454333 2467899999998765 5567899999999998877666543
Q ss_pred cC------CeEEEecCCC-ceEEEecC------------CCeEEEEEcCCCc---ceeeecCCCCceeEEEEcCCCCEEE
Q 010794 295 SG------PTLDVDWRNN-VSFATSST------------DNMIYVCKIGENR---PIKTFAGHQGEVNCVKWDPTGSLLA 352 (501)
Q Consensus 295 ~~------~~~~~~~~~~-~~~~~~~~------------d~~i~~~~~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~ 352 (501)
.. .+..+.|.++ ..+++++. ++.|++|++.+++ .+..+.. ...+.+++|+|+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EE
Confidence 22 2455666543 34454443 4899999998743 3333433 34688999999999 55
Q ss_pred EEeCCCeEEEEeCCCCceeeecccCCC------------------------CEEEEEEcCCCCCCCCCCCcEEEEEEeCC
Q 010794 353 SCSDDVTAKIWNMKQDKYVHDLREHSK------------------------EIYTIRWSPTGSGTNNPNQQLILASASFD 408 (501)
Q Consensus 353 s~s~Dg~i~iwd~~~~~~~~~~~~~~~------------------------~v~~i~~~p~g~~~~~~~~~~~l~sgs~d 408 (501)
.++. .|.+||+.+++.+..+..... ....+++++++...... ....
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~~ 232 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT--------ADLL 232 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC--------CEEE
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc--------cccc
Confidence 5543 499999998887665543210 22334554443210000 0000
Q ss_pred CeEEEEeCCCCeE-EEEeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEE
Q 010794 409 STVKLWDVELGKL-LYSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIA 486 (501)
Q Consensus 409 g~i~iwd~~~~~~-~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la 486 (501)
..+..++..+++. ...+..+...+..++|+| +|++|+++ ++.|.+||+.+++.+..+.....+.+++|+|+|++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEE
T ss_pred eeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEE
Confidence 1112244444332 122233556789999999 99999888 8899999999999988887666688999999999988
Q ss_pred EEECCCeEEEEEee
Q 010794 487 ACFANHTVCVLDFR 500 (501)
Q Consensus 487 ~~~~d~~v~v~~~~ 500 (501)
+++.++.|.|||++
T Consensus 311 ~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 311 LGGTFNDLAVFNPD 324 (349)
T ss_dssp EESBSSEEEEEETT
T ss_pred EecCCCeEEEEecc
Confidence 88889999999974
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=9.1e-21 Score=201.92 Aligned_cols=286 Identities=12% Similarity=0.082 Sum_probs=185.9
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccc-cCCCCeEEEEECCCCCEEEEEeCC
Q 010794 155 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN-EKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 155 ~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
....++|+|||.+|+++ |+.|++|++.++... ..+.++.. ........++|||||++|+.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-------------VFLENSTFDEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE-------------EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceE-------------EEEechhhhhhcccccceEECCCCCEEEEEECC
Confidence 45689999999999987 999999999876521 11122211 112223458999999999999876
Q ss_pred ---------CeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeee-eccCCeEEEec
Q 010794 234 ---------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE-FHSGPTLDVDW 303 (501)
Q Consensus 234 ---------g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 303 (501)
+.+.+||+.+.....+..|.+.+...+|||+|++|+.++ |+.|++|++.++...+... .+...+
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~----- 156 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDII----- 156 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTE-----
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccce-----
Confidence 566799998877667778888999999999999998884 7899999998876433111 111101
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCC---------CceeEEEEcCCCCEEEEEeCC-----------------
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWDPTGSLLASCSDD----------------- 357 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~---------~~v~~v~~~~~~~~l~s~s~D----------------- 357 (501)
+.++. +...++.|||||+.||.++.|
T Consensus 157 ----------------------------~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~ 208 (740)
T 4a5s_A 157 ----------------------------YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL 208 (740)
T ss_dssp ----------------------------EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTC
T ss_pred ----------------------------ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCC
Confidence 11111 112345566666655554321
Q ss_pred -------------------CeEEEEeCCC---Cc--eeeecc------cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe-
Q 010794 358 -------------------VTAKIWNMKQ---DK--YVHDLR------EHSKEIYTIRWSPTGSGTNNPNQQLILASAS- 406 (501)
Q Consensus 358 -------------------g~i~iwd~~~---~~--~~~~~~------~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs- 406 (501)
.+|++||+.+ +. ....+. .+...+..++|+|+|. +++...
T Consensus 209 ~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~---------~~~~~~~ 279 (740)
T 4a5s_A 209 QYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER---------ISLQWLR 279 (740)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE---------EEEEEEE
T ss_pred CCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe---------EEEEEeC
Confidence 2588899988 63 122232 3667789999999985 333322
Q ss_pred ---CCCeEEEEeCCCCe----EE--EEe--eCCCCCeE-----EEEECCCCCEEE-EEeC-C--CcEEEEeCCCCeeEEE
Q 010794 407 ---FDSTVKLWDVELGK----LL--YSL--NGHREPVY-----SLAFSPTGEYLA-SGSL-D--KSMHIWSLKEGKIVKT 466 (501)
Q Consensus 407 ---~dg~i~iwd~~~~~----~~--~~~--~~h~~~v~-----~l~~spdg~~la-sgs~-D--g~i~iw~~~~~~~~~~ 466 (501)
.+..|++||+.+++ +. ..+ .+|...|. .++|+|||+.|+ ..+. + ..|++|++.+++....
T Consensus 280 r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 280 RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred CCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEec
Confidence 23479999998876 22 112 44655554 789999999887 6664 3 3688889887766554
Q ss_pred EecCCCEEEEEECCCCCEEEEEECC-----CeEEEEEe
Q 010794 467 YTGNGGIFEVCWNKEGDKIAACFAN-----HTVCVLDF 499 (501)
Q Consensus 467 ~~~~~~i~~~~ws~~g~~la~~~~d-----~~v~v~~~ 499 (501)
..+.-.+..+.+ +||+.|+..+.. +..+||.+
T Consensus 360 T~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 360 TKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp CCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred ccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 445445655442 447766655443 34455543
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=1.8e-21 Score=207.01 Aligned_cols=272 Identities=14% Similarity=0.136 Sum_probs=189.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCceeEe-ecCCCC---CEEEEEecCCCCEEEEEec---------CCeEEEEeCC
Q 010794 217 TLDWNGEGTLLATGSYDGQARIWSTNGDLKCT-LSKHKG---PIFSLKWNKKGDYLLTGSC---------DKTAIVWDVK 283 (501)
Q Consensus 217 ~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~-~~~h~~---~V~~l~~~~~~~~l~s~s~---------D~~i~iwd~~ 283 (501)
+++|+|+|+++++ +.|+.|++|+..+..... +..|.. .|.+++|+|+|++|++++. +++|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999966555 469999999987654443 433433 3889999999999998876 7899999999
Q ss_pred CcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeee-cCCCCce-----------------eEEEEc
Q 010794 284 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEV-----------------NCVKWD 345 (501)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v-----------------~~v~~~ 345 (501)
+++....... ...+..+.|.++...++...++.|++|++..+...+.. .++...| .+++|+
T Consensus 99 ~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 99 NGEFVRGNEL-PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp TTEECCSSCC-CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred CCccccceec-CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 8876211111 24466677876554333335789999999876654432 2332222 589999
Q ss_pred CCCCEEEEEeCCC----------------------------------eEEEEeCCCCcee--------eecccCCCCEEE
Q 010794 346 PTGSLLASCSDDV----------------------------------TAKIWNMKQDKYV--------HDLREHSKEIYT 383 (501)
Q Consensus 346 ~~~~~l~s~s~Dg----------------------------------~i~iwd~~~~~~~--------~~~~~~~~~v~~ 383 (501)
|||++|++++.|. .|++||+.+++.. ..+..+...+..
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 9999999988652 7889999887643 223457778999
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeC--C--CeEEEEe----CCCCeEEEEe----eCCCCCeE-----EEEECCCCCEEEE
Q 010794 384 IRWSPTGSGTNNPNQQLILASASF--D--STVKLWD----VELGKLLYSL----NGHREPVY-----SLAFSPTGEYLAS 446 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~--d--g~i~iwd----~~~~~~~~~~----~~h~~~v~-----~l~~spdg~~las 446 (501)
++|+|++. ++++... + ..|.+|| +.++++...+ .+|...|. .++|+|||+.|+.
T Consensus 258 ~~~SpD~~---------~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 258 LTWVTDER---------VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEESSSSE---------EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred eEEeCCCe---------EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 99999964 5555332 2 2488899 8777665444 46777776 8899999996654
Q ss_pred --EeCCC--cEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC-----CeEEEEEee
Q 010794 447 --GSLDK--SMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN-----HTVCVLDFR 500 (501)
Q Consensus 447 --gs~Dg--~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d-----~~v~v~~~~ 500 (501)
+..+| .|.+|++.+++......+...+..+.|+ +|+.|++.+.+ +.+.+|.+.
T Consensus 329 ~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 329 IFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 44555 5777788777643222333457777777 88888877665 778888764
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=4.5e-19 Score=172.17 Aligned_cols=257 Identities=12% Similarity=0.075 Sum_probs=173.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCC----CeEEEEECCC--c-e--eEeecCCCCCEEEEEecCCCCEEEEEe-cCCeEEEEe
Q 010794 212 SKDVTTLDWNGEGTLLATGSYD----GQARIWSTNG--D-L--KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWD 281 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~d----g~i~iw~~~~--~-~--~~~~~~h~~~V~~l~~~~~~~~l~s~s-~D~~i~iwd 281 (501)
...+..++|+|+|++|++++.+ +.|.+|+... . . ......+......+++ ++++|++++ .+++|.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 3456789999999999999886 7999998653 2 2 2233345556777888 778777665 588999999
Q ss_pred CCCcceeEee---eecc-----------CCeEEEecCCCc--eEEEecCCCeEEEEEcCCCcc------e-------eee
Q 010794 282 VKTEEWKQQF---EFHS-----------GPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRP------I-------KTF 332 (501)
Q Consensus 282 ~~~~~~~~~~---~~~~-----------~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~------~-------~~~ 332 (501)
+........+ ..+. ..+..+.|.++. .+++...++.|++|++..... + ...
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 9754322211 1111 123556776543 445566788999998875431 1 112
Q ss_pred cCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCce--eeec---ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe
Q 010794 333 AGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKY--VHDL---REHSKEIYTIRWSPTGSGTNNPNQQLILASAS 406 (501)
Q Consensus 333 ~~h~~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~~~~~~--~~~~---~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs 406 (501)
..+...+..++|+|+|+++++++ .++.|.+|++.++.. +..+ ..+......++|+|+|. .++++..
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~--------~l~v~~~ 278 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK--------YLYASNR 278 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS--------EEEEEEC
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC--------EEEEECC
Confidence 23345678999999999877666 689999999986644 2222 22334567999999986 2334444
Q ss_pred C-CCeEEEEeCC--CCe--EEEEeeCCCCCeEEEEECCCCCEEEEEe-CCCcEEEE--eCCCCeeEEEEe--cCCCEEEE
Q 010794 407 F-DSTVKLWDVE--LGK--LLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIW--SLKEGKIVKTYT--GNGGIFEV 476 (501)
Q Consensus 407 ~-dg~i~iwd~~--~~~--~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw--~~~~~~~~~~~~--~~~~i~~~ 476 (501)
. ++.|.+|++. +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.+| |..+|++..... ....+.++
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v 357 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCL 357 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEE
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEE
Confidence 4 6899999985 444 4444554 45678999999999998887 67899996 555777654431 23457888
Q ss_pred EEC
Q 010794 477 CWN 479 (501)
Q Consensus 477 ~ws 479 (501)
+|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 885
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=3.8e-18 Score=165.95 Aligned_cols=265 Identities=14% Similarity=0.131 Sum_probs=177.0
Q ss_pred EEEEEeCC--CeEEEEEC--CCceeEeec----CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCC-CcceeEeeeec-c
Q 010794 226 LLATGSYD--GQARIWST--NGDLKCTLS----KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQFEFH-S 295 (501)
Q Consensus 226 ~l~sg~~d--g~i~iw~~--~~~~~~~~~----~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~-~ 295 (501)
+++.|++. +.|.+|.. .......+. .....+..++|+|++++|++++.+ +|.+|++. +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 34555553 46777654 222221111 233457789999999999999888 99999997 77654433321 1
Q ss_pred CCeEEEecCCCce--EE-Eec-------------CCCeEEEEEcCC-Ccceeeec----CCCCceeEEEEcCCCCEEEEE
Q 010794 296 GPTLDVDWRNNVS--FA-TSS-------------TDNMIYVCKIGE-NRPIKTFA----GHQGEVNCVKWDPTGSLLASC 354 (501)
Q Consensus 296 ~~~~~~~~~~~~~--~~-~~~-------------~d~~i~~~~~~~-~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~ 354 (501)
+.+..+.+.++.. ++ ++. .++.+.+|++.. +.....+. .+...+.+++|+|||++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 2344566765544 33 442 688999999874 44333222 245678999999999988776
Q ss_pred e-CCCeEEEEeCC-CCcee--eecc--cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe-CCCeEEEEeCC--CCeEEE--
Q 010794 355 S-DDVTAKIWNMK-QDKYV--HDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVE--LGKLLY-- 423 (501)
Q Consensus 355 s-~Dg~i~iwd~~-~~~~~--~~~~--~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~--~~~~~~-- 423 (501)
. .++.|++|++. +++.. ..+. .+...+..++|+|+|. +|++++ .++.|.+|++. +++...
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~---------~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 233 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN---------YLYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS---------EEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC---------EEEEEECCCCeEEEEEEeCCCCcEEEcc
Confidence 5 46799999998 66542 2332 2355688999999986 455544 57899999765 565432
Q ss_pred -Eee-------CCCC------CeEEEE-ECCCCCEEEEEeCC-C-----cEEEEeCC-CCeeEE---EEec-CCCEEEEE
Q 010794 424 -SLN-------GHRE------PVYSLA-FSPTGEYLASGSLD-K-----SMHIWSLK-EGKIVK---TYTG-NGGIFEVC 477 (501)
Q Consensus 424 -~~~-------~h~~------~v~~l~-~spdg~~lasgs~D-g-----~i~iw~~~-~~~~~~---~~~~-~~~i~~~~ 477 (501)
.+. +|.. .+..++ |+|||++|++++.+ . +|.+|++. +|++.. .... ...+..++
T Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a 313 (365)
T 1jof_A 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA 313 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC
T ss_pred ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccce
Confidence 222 1222 488999 99999998876543 2 89999996 676543 2322 23456789
Q ss_pred ECC---CCCEEEEEEC-CCeEEEEEee
Q 010794 478 WNK---EGDKIAACFA-NHTVCVLDFR 500 (501)
Q Consensus 478 ws~---~g~~la~~~~-d~~v~v~~~~ 500 (501)
|+| ||++|+++.. ++.|.||++.
T Consensus 314 ~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 314 VSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred ecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 999 8999998876 4899999874
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=9.9e-19 Score=170.09 Aligned_cols=248 Identities=11% Similarity=0.080 Sum_probs=166.9
Q ss_pred CccceeEEEECCCCCEEEEEECCCcEEEEecC-CCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCE--EE
Q 010794 152 HTSEVCACAWSPAGSLLASGSGDSTARIWTIA-DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL--LA 228 (501)
Q Consensus 152 H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~--l~ 228 (501)
+...+..++|+|+|++|++++.+ .|.+|++. ++.. ........ ...+.+++|+|+|++ ++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~-----------~~~~~~~~-----~g~~~~~~~spdg~~l~~~ 100 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI-----------VHEASHPI-----GGHPRANDADTNTRAIFLL 100 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE-----------EEEEEEEC-----CSSGGGGCTTSCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE-----------EEeeEeec-----CCCCccEEECCCCCEEEEE
Confidence 33468899999999999999988 99999986 4421 11111110 012455889999994 55
Q ss_pred EEe-------------CCCeEEEEECC--CceeEeec----CCCCCEEEEEecCCCCEEEEEec-CCeEEEEeCC-Ccce
Q 010794 229 TGS-------------YDGQARIWSTN--GDLKCTLS----KHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVK-TEEW 287 (501)
Q Consensus 229 sg~-------------~dg~i~iw~~~--~~~~~~~~----~h~~~V~~l~~~~~~~~l~s~s~-D~~i~iwd~~-~~~~ 287 (501)
++. .++.+.+|++. +.....+. .+...+.+++|+|+|++|+++.. +++|++|++. +++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~ 180 (365)
T 1jof_A 101 AAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV 180 (365)
T ss_dssp ECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE
T ss_pred EecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE
Confidence 553 68999999975 33332232 25567899999999998887654 6799999987 5543
Q ss_pred eEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEeCC
Q 010794 288 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMK 366 (501)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-Dg~i~iwd~~ 366 (501)
..... ..+..|...+..++|+|+|+++++++. ++.|.+|++.
T Consensus 181 ~~~~~-------------------------------------~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 181 ELVGS-------------------------------------VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEE-------------------------------------EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeee-------------------------------------EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 21000 001113445788999999998877764 7899999765
Q ss_pred --CCcee------eeccc----CCC------CEEEEE-EcCCCCCCCCCCCcEEEEEEeC-CC-----eEEEEeCC-CCe
Q 010794 367 --QDKYV------HDLRE----HSK------EIYTIR-WSPTGSGTNNPNQQLILASASF-DS-----TVKLWDVE-LGK 420 (501)
Q Consensus 367 --~~~~~------~~~~~----~~~------~v~~i~-~~p~g~~~~~~~~~~~l~sgs~-dg-----~i~iwd~~-~~~ 420 (501)
+++.. ..+.. +.. .+..++ |+|+|. +|++++. .+ .|++|++. +++
T Consensus 224 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~---------~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK---------YMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS---------EEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred CCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC---------EEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 45432 11211 121 478899 999986 3444432 23 89999986 566
Q ss_pred EEE---EeeCCCCCeEEEEECC---CCCEEEEEeCC-CcEEEEeCCCCe
Q 010794 421 LLY---SLNGHREPVYSLAFSP---TGEYLASGSLD-KSMHIWSLKEGK 462 (501)
Q Consensus 421 ~~~---~~~~h~~~v~~l~~sp---dg~~lasgs~D-g~i~iw~~~~~~ 462 (501)
... .+..+...+..++|+| ||++|++++.+ +.|.+|++....
T Consensus 295 ~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 295 IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 543 2334445567899999 89999998864 899999987664
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=9.3e-19 Score=169.77 Aligned_cols=289 Identities=9% Similarity=0.091 Sum_probs=193.5
Q ss_pred CCCEEEEEE------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeC-----
Q 010794 164 AGSLLASGS------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY----- 232 (501)
Q Consensus 164 ~~~~l~sgs------~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~----- 232 (501)
++++++... .|+.|.+||..+++.. ..+... ..+ .++|+|||++++++..
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~-------------~~i~~g----~~p--~i~~spdg~~lyv~~~~~~~~ 74 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFL-------------GMVPTA----FNG--HVQVSNDGKKIYTMTTYHERI 74 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEE-------------EEEECC----EEE--EEEECTTSSEEEEEEEEETTS
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEE-------------EEecCC----CCC--ceEECCCCCEEEEEEeccccc
Confidence 455555443 4789999998765421 111111 122 7899999999999863
Q ss_pred -----CCeEEEEECCC-ceeEeecC------CCCCEEEEEecCCCCEEEEEec--CCeEEEEeCCCcceeEe-eeeccCC
Q 010794 233 -----DGQARIWSTNG-DLKCTLSK------HKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQ-FEFHSGP 297 (501)
Q Consensus 233 -----dg~i~iw~~~~-~~~~~~~~------h~~~V~~l~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~-~~~~~~~ 297 (501)
++.|.+||... .....+.. +......++|+|+|++|+++.. +++|.+||+.+++.+.. +......
T Consensus 75 ~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~ 154 (361)
T 2oiz_A 75 TRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCW 154 (361)
T ss_dssp SSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEE
T ss_pred ccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcc
Confidence 67899999864 33334432 2234567899999999998864 68999999999887766 4322111
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCC-Ccce------eeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPI------KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 370 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~------~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~ 370 (501)
...+.......+++.+.|+.+.+++... ++.. ..+..+..++ .+.++|++..++..+.++.+.++|+.....
T Consensus 155 ~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~ 233 (361)
T 2oiz_A 155 SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV 233 (361)
T ss_dssp EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC
T ss_pred eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc
Confidence 1112222345778888899988888754 3332 1222222222 233467787777788899999999865432
Q ss_pred e--eeccc------C----CCCEEEEEEcCCCCCCCCCCCcEEEEEEe----------CCCeEEEEeCCCCeEEEEeeCC
Q 010794 371 V--HDLRE------H----SKEIYTIRWSPTGSGTNNPNQQLILASAS----------FDSTVKLWDVELGKLLYSLNGH 428 (501)
Q Consensus 371 ~--~~~~~------~----~~~v~~i~~~p~g~~~~~~~~~~~l~sgs----------~dg~i~iwd~~~~~~~~~~~~h 428 (501)
. ..+.. + ......++|+|++. .++++.+ ..+.|.+||+.+++.+.++..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~--------~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~ 305 (361)
T 2oiz_A 234 KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG--------RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR 305 (361)
T ss_dssp EEEEEEESCCHHHHHTTCEECCSSCEEEETTTT--------EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT
T ss_pred eecccccccCccccccccccCCeeEEEEecCCC--------eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC
Confidence 1 11110 0 01111256777764 2334333 1358999999999999999887
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC--eeEEEEe-cCCCEEEEEECCCCC
Q 010794 429 REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG--KIVKTYT-GNGGIFEVCWNKEGD 483 (501)
Q Consensus 429 ~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~--~~~~~~~-~~~~i~~~~ws~~g~ 483 (501)
. +.+|+|+|||++|++++. +.|.+||..++ +++.++. .......++++|+|.
T Consensus 306 ~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 306 D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 6 899999999999998887 99999999999 9998874 344588999999985
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=6.4e-19 Score=185.44 Aligned_cols=281 Identities=10% Similarity=0.049 Sum_probs=187.6
Q ss_pred EccCCccceeEEEECCCCCEEEEE--ECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeE---------
Q 010794 148 ILEGHTSEVCACAWSPAGSLLASG--SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT--------- 216 (501)
Q Consensus 148 ~l~~H~~~V~~~~~sp~~~~l~sg--s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--------- 216 (501)
.+.+|...|..++|++++-+++++ +.++...||....+... +.+.. +...|.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~~l~~----~~~~~~~~~~~~~~~ 80 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE-------------ESALP----APWNVRNRVFEYSGF 80 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE-------------EESSC----TTCCBCCCGGGTCCC
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc-------------ceeCC----CCccccccccccCCc
Confidence 467899999999999887777777 56889999986332110 11111 111222
Q ss_pred EEEEC--CCCCE-EEEEeC-CCeEEEEECC--C-ceeEeecC-----CCCCEEEEEecCCCCEEEEEecC----------
Q 010794 217 TLDWN--GEGTL-LATGSY-DGQARIWSTN--G-DLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSCD---------- 274 (501)
Q Consensus 217 ~~~~s--~~~~~-l~sg~~-dg~i~iw~~~--~-~~~~~~~~-----h~~~V~~l~~~~~~~~l~s~s~D---------- 274 (501)
...|+ |||++ |+.++. +..|++|+.. + .....+.. |...+..++|+|+|++|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 34454 99998 766554 5677777776 3 44455555 66788999999999999988876
Q ss_pred CeEEEEeCCC------cceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeec-CCCCceeEEEEcCC
Q 010794 275 KTAIVWDVKT------EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPT 347 (501)
Q Consensus 275 ~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~ 347 (501)
.+|++||+.+ +. ...+. .+...+..++|+||
T Consensus 161 ~~i~~~~~~~~~~~~~~~------------------------------------------~~~l~~~~~~~~~~~~~SpD 198 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA------------------------------------------VRELSDDAHRFVTGPRLSPD 198 (662)
T ss_dssp EEEEEEETTSTTTTCGGG------------------------------------------SEESSCSCSSEECCCEECTT
T ss_pred eEEEEEECCCCccccCCc------------------------------------------eeEEEecCCCcccCceECCC
Confidence 3566666554 22 12233 34456778999999
Q ss_pred CCEEEEEeCC--------CeEEEEeCC-CC---ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC--eEEE
Q 010794 348 GSLLASCSDD--------VTAKIWNMK-QD---KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS--TVKL 413 (501)
Q Consensus 348 ~~~l~s~s~D--------g~i~iwd~~-~~---~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg--~i~i 413 (501)
|++|+.++.+ ..|++||+. ++ ........+...+..+.|+|+|. ++++++.++ .|.+
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~---------l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS---------LIVATDRTGWWNLHR 269 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC---------EEEEECTTSSCEEEE
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe---------EEEEECCCCCeEEEE
Confidence 9999887755 379999998 46 33333334567899999999986 667778888 6777
Q ss_pred EeCCCCeEEEEeeCCCCC--------eEEEEECCCCCEEEEEeCCCcEEEE--eCCCCeeEEEEecCC-CEEEEEECCCC
Q 010794 414 WDVELGKLLYSLNGHREP--------VYSLAFSPTGEYLASGSLDKSMHIW--SLKEGKIVKTYTGNG-GIFEVCWNKEG 482 (501)
Q Consensus 414 wd~~~~~~~~~~~~h~~~--------v~~l~~spdg~~lasgs~Dg~i~iw--~~~~~~~~~~~~~~~-~i~~~~ws~~g 482 (501)
||+.+++.......+... +.+++|+|+++++++++. +.++|| ++.+++ +..+..+. .+..+ |+++|
T Consensus 270 ~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~ 346 (662)
T 3azo_A 270 VDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSG 346 (662)
T ss_dssp ECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEET
T ss_pred EECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCC
Confidence 777667654433333222 567999999999999999 999999 666666 45554443 35544 35566
Q ss_pred CEEE--EEECCCeEEEEEe
Q 010794 483 DKIA--ACFANHTVCVLDF 499 (501)
Q Consensus 483 ~~la--~~~~d~~v~v~~~ 499 (501)
+.++ +++.+....||.+
T Consensus 347 ~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 347 TRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp TEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEcCCCCCCEEEEE
Confidence 5443 4455554455543
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.83 E-value=6e-19 Score=173.16 Aligned_cols=271 Identities=11% Similarity=0.043 Sum_probs=179.7
Q ss_pred eEEEEECCCCCEEEEEeCC---CeEEEEECCCceeEeecCCCCCEE-EEEecCCCCEEEEEecCCeEEEEeCCCcceeEe
Q 010794 215 VTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIF-SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 290 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~-~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 290 (501)
+..++|||||++|+..... ..|.+|+..+.....+..+...+. .+.|+|+|++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6677899999998877543 478888987765555544444333 378999999999999999999999998876555
Q ss_pred eeeccCCeEE-------------------EecCCCc-eEEEe-----cCCCeEEEEEcCCCcceeeecCCCCceeEEEEc
Q 010794 291 FEFHSGPTLD-------------------VDWRNNV-SFATS-----STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD 345 (501)
Q Consensus 291 ~~~~~~~~~~-------------------~~~~~~~-~~~~~-----~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~ 345 (501)
+..+...... ..|.++. .++.. ..+..|++|++..+...... .+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 4433321111 1122111 11111 34568999999877654443 466778999999
Q ss_pred C-CCCEEEEEeCC------CeEEEEeCCCCceeeecccC--CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----CeE
Q 010794 346 P-TGSLLASCSDD------VTAKIWNMKQDKYVHDLREH--SKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STV 411 (501)
Q Consensus 346 ~-~~~~l~s~s~D------g~i~iwd~~~~~~~~~~~~~--~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~i 411 (501)
| +++.|+.++.+ ..|.+|++..+.... +..+ ...+..+.|+|+|. .|+.++.+ +.|
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~---------~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGS---------AMAYVSYFKGQTDRVI 266 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSS---------CEEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCC---------EEEEEecCCCCccceE
Confidence 9 78877766654 358888887654332 2222 23577889999986 33444332 459
Q ss_pred EEEeCCCCeEEEEeeCCCCCeEEEEECC-CCCEEEEEe----------------CCCcEEEEeCCCCeeEEEEecCC---
Q 010794 412 KLWDVELGKLLYSLNGHREPVYSLAFSP-TGEYLASGS----------------LDKSMHIWSLKEGKIVKTYTGNG--- 471 (501)
Q Consensus 412 ~iwd~~~~~~~~~~~~h~~~v~~l~~sp-dg~~lasgs----------------~Dg~i~iw~~~~~~~~~~~~~~~--- 471 (501)
++||+.+++...... .. .+. ++|+| +|++|++++ .+..|++|++.+++.........
T Consensus 267 ~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 343 (396)
T 3c5m_A 267 YKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWD 343 (396)
T ss_dssp EEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCC
T ss_pred EEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccc
Confidence 999998886543222 11 233 89999 999988765 34789999998887543333332
Q ss_pred --------CEEEEEECCCCCEEEEEEC-CCeEEEEEe
Q 010794 472 --------GIFEVCWNKEGDKIAACFA-NHTVCVLDF 499 (501)
Q Consensus 472 --------~i~~~~ws~~g~~la~~~~-d~~v~v~~~ 499 (501)
.+..++|+|||+.|++++. ++...||-+
T Consensus 344 ~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 344 VLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 1567899999999887765 455555544
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=1.6e-17 Score=159.07 Aligned_cols=247 Identities=12% Similarity=0.143 Sum_probs=182.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCC------------------------CeEEEEECC-CceeEeec-CCCCCEEEEEecCCC
Q 010794 212 SKDVTTLDWNGEGTLLATGSYD------------------------GQARIWSTN-GDLKCTLS-KHKGPIFSLKWNKKG 265 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~d------------------------g~i~iw~~~-~~~~~~~~-~h~~~V~~l~~~~~~ 265 (501)
...|.+++++++|+++++...+ +.|.+|+.. +.....+. ++-....+++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999988877 479999986 55444433 344578999999999
Q ss_pred CEEEEEecCCeEEEEeCCCcc-eeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEE
Q 010794 266 DYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 344 (501)
Q Consensus 266 ~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 344 (501)
+.+++.+.++.|++||..... .+..+..... ...-.++......+++
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~--------------------------------~g~~~~~~~~P~~ia~ 150 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ--------------------------------PGSDQNHFCQPTDVAV 150 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTB--------------------------------CCCSTTCCSSEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCC--------------------------------CCCCccccCCCcEEEE
Confidence 988888889999999975432 2211110000 0000123446789999
Q ss_pred cC-CCCEEEEEe-CCCeEEEEeCCCCceeeecccC----------CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEE
Q 010794 345 DP-TGSLLASCS-DDVTAKIWNMKQDKYVHDLREH----------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 412 (501)
Q Consensus 345 ~~-~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~----------~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~ 412 (501)
+| ++.++++.+ .++.|++|+ ..+..+..+... ......++++|++. .++++...++.|+
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g--------~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD--------QLCVADRENGRIQ 221 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT--------EEEEEETTTTEEE
T ss_pred eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC--------EEEEEECCCCEEE
Confidence 99 888888887 699999999 456666555322 23378899998732 3677778899999
Q ss_pred EEeCCCCeEEEEee--CCCCCeEEEEECCCCCEEEE-------EeCCCcEEEEeCCCCeeEEEEec----CCCEEEEEEC
Q 010794 413 LWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLAS-------GSLDKSMHIWSLKEGKIVKTYTG----NGGIFEVCWN 479 (501)
Q Consensus 413 iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~las-------gs~Dg~i~iw~~~~~~~~~~~~~----~~~i~~~~ws 479 (501)
+|+..+++.+..+. .+...+.+++|+| +..+++ .+.+.+|++|++.+|+++.++.. ...+..++++
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 99999899888874 4566789999999 433333 33456899999999999888742 3358999999
Q ss_pred CCCCEEEEEECCCeEEEEEee
Q 010794 480 KEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 480 ~~g~~la~~~~d~~v~v~~~~ 500 (501)
|+|+.+++...++.|.+|++.
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEE
T ss_pred CCCCEEEEECCCCEEEEEeCC
Confidence 999888899999999999874
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=4.6e-17 Score=152.49 Aligned_cols=236 Identities=14% Similarity=0.264 Sum_probs=176.2
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeec------CCCCCEEEEEe-cCCCCEEEEEec-CCeEEEEeC
Q 010794 211 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS------KHKGPIFSLKW-NKKGDYLLTGSC-DKTAIVWDV 282 (501)
Q Consensus 211 ~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~------~h~~~V~~l~~-~~~~~~l~s~s~-D~~i~iwd~ 282 (501)
+...+.+++++++++++++...++.|.+|+..+.....+. +|...+.++++ .+++..+++... ++.|.+||.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~ 107 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 107 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC
Confidence 3456889999999999998889999999998876655553 24457899999 467766666543 889999984
Q ss_pred CCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q 010794 283 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 362 (501)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~i 362 (501)
++.....+. ..+...+.+++++|+|+++++...++.|.+
T Consensus 108 -~g~~~~~~~----------------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 146 (286)
T 1q7f_A 108 -YGQFVRKFG----------------------------------------ATILQHPRGVTVDNKGRIIVVECKVMRVII 146 (286)
T ss_dssp -TSCEEEEEC----------------------------------------TTTCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred -CCcEEEEec----------------------------------------CccCCCceEEEEeCCCCEEEEECCCCEEEE
Confidence 443222110 012345778999999999888888999999
Q ss_pred EeCCCCceeeecc--cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--CCCeEEEEEC
Q 010794 363 WNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--REPVYSLAFS 438 (501)
Q Consensus 363 wd~~~~~~~~~~~--~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~s 438 (501)
||.. ++.+..+. .+...+..++++|++. ++++.+.++.|++||.. ++.+..+..+ ...+..|+++
T Consensus 147 ~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~---------l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 147 FDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE---------IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp ECTT-SCEEEEEECTTTCSSEEEEEECSSSE---------EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEEC
T ss_pred EcCC-CCEEEEeCCCCccCCcEEEEECCCCC---------EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEEC
Confidence 9964 44444443 3345688999999874 66777778999999974 5666666543 3578999999
Q ss_pred CCCCEEEEEeCCC-cEEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 439 PTGEYLASGSLDK-SMHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 439 pdg~~lasgs~Dg-~i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
|+|+++++...++ .|.+|+. +++.+..+... ..+.+++|+|+|+++++ ..+++|.||++.
T Consensus 216 ~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 216 SNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred CCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 9999999888886 9999995 56666666443 23789999999987777 579999999864
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=1.8e-17 Score=158.73 Aligned_cols=249 Identities=12% Similarity=0.169 Sum_probs=183.0
Q ss_pred ccceeEEEECCCCCEEEEEECC------------------------CcEEEEecCCCCCCCCCCCCCceEEEEEeecccc
Q 010794 153 TSEVCACAWSPAGSLLASGSGD------------------------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT 208 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~D------------------------~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (501)
.+.|.+++|+|+|+++++.+.+ +.|.+||..++... ....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~-------------~~~~--- 86 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL-------------QSSG--- 86 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE-------------EEEC---
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE-------------eccC---
Confidence 3569999999999999998887 46888887655321 1110
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCc--eeEee---------cCCCCCEEEEEecC-CCCEEEEEe-cCC
Q 010794 209 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD--LKCTL---------SKHKGPIFSLKWNK-KGDYLLTGS-CDK 275 (501)
Q Consensus 209 ~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~--~~~~~---------~~h~~~V~~l~~~~-~~~~l~s~s-~D~ 275 (501)
..+......++++++|+++++...++.|++|+..+. ....+ ..+-....+|+++| ++..+++.+ .++
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 122346789999999999999889999999998876 34444 23445689999999 788888876 689
Q ss_pred eEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC-CCEEEEE
Q 010794 276 TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASC 354 (501)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~ 354 (501)
.|++||. .+.....+..... .. ....++......++++|+ +.++++.
T Consensus 167 ~I~~~~~-~g~~~~~~~~~g~-----------------------------~~--~~~~~~~~~p~gia~d~~~g~l~v~d 214 (329)
T 3fvz_A 167 RIVQFSP-SGKFVTQWGEESS-----------------------------GS--SPRPGQFSVPHSLALVPHLDQLCVAD 214 (329)
T ss_dssp EEEEECT-TSCEEEEECEECC-----------------------------SS--SCCTTEESCEEEEEEETTTTEEEEEE
T ss_pred eEEEEcC-CCCEEEEeccCCC-----------------------------CC--CCCCcccCCCcEEEEECCCCEEEEEE
Confidence 9999994 4444333221100 00 000112235788999998 7888888
Q ss_pred eCCCeEEEEeCCCCceeeecc--cCCCCEEEEEEcCCCCCCCCCCCcEEEEE-------EeCCCeEEEEeCCCCeEEEEe
Q 010794 355 SDDVTAKIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILAS-------ASFDSTVKLWDVELGKLLYSL 425 (501)
Q Consensus 355 s~Dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~p~g~~~~~~~~~~~l~s-------gs~dg~i~iwd~~~~~~~~~~ 425 (501)
..++.|++|+..+++.+..+. .+...++.++|+| +. ++++ .+.+..|++|++.+++.+..+
T Consensus 215 ~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~---------~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 215 RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF---------LFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE---------EEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE---------EEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 899999999998888877763 3556788999998 31 2222 233458999999999998887
Q ss_pred e---CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010794 426 N---GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 426 ~---~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
. ++...+..|+++|+|.++++...+++|++|++.
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 3 667779999999999888898899999999975
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=8.2e-17 Score=150.76 Aligned_cols=247 Identities=14% Similarity=0.224 Sum_probs=177.2
Q ss_pred CCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE-CCCCCEEEE
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-NGEGTLLAT 229 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-s~~~~~l~s 229 (501)
+|...+.+++++|+|.++++.+.++.|.+|+.. +.. ...+ ...+....+...+..+++ .+++.++++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~----------~~~~-~~~~~~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRF----------KFQF-GECGKRDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCE----------EEEE-CCBSSSTTCBSSEEEEEEETTTTEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcE----------EEEe-cccCCCcccccCceEEEEEcCCCeEEEE
Confidence 466778999999999999988899999999965 221 0000 001111123346889999 577777776
Q ss_pred EeC-CCeEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc
Q 010794 230 GSY-DGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 307 (501)
Q Consensus 230 g~~-dg~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (501)
... ++.|++|+..+.....+. .+...+.+++++|+|+.+++...++.|.+||... .....+.
T Consensus 95 ~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~--------------- 158 (286)
T 1q7f_A 95 ERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFG--------------- 158 (286)
T ss_dssp ECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEE---------------
T ss_pred cCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeC---------------
Confidence 644 899999997777665553 3445689999999999888878889999998643 2221110
Q ss_pred eEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccC--CCCEEEEE
Q 010794 308 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH--SKEIYTIR 385 (501)
Q Consensus 308 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~~v~~i~ 385 (501)
..++...+.+++++|+|+++++.+.++.|++||.. +..+..+... ...+..++
T Consensus 159 ------------------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 159 ------------------------CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp ------------------------CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEE
T ss_pred ------------------------CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEE
Confidence 01233457899999999988888889999999974 4455555433 35688999
Q ss_pred EcCCCCCCCCCCCcEEEEEEeCCC-eEEEEeCCCCeEEEEeeCCC--CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 386 WSPTGSGTNNPNQQLILASASFDS-TVKLWDVELGKLLYSLNGHR--EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 386 ~~p~g~~~~~~~~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
++|+|. ++++...++ .|++|+. .++.+..+..+. ..+.+++|+|+|+++++ +.|++|++|++...
T Consensus 214 ~d~~G~---------l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 214 INSNGE---------ILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ECTTCC---------EEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ECCCCC---------EEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 999885 666666665 9999995 466666665543 34789999999987777 67999999998653
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=8.1e-18 Score=165.07 Aligned_cols=277 Identities=10% Similarity=-0.026 Sum_probs=175.8
Q ss_pred ceeEEEECCCCCEEEEEECC---CcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe
Q 010794 155 EVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 155 ~V~~~~~sp~~~~l~sgs~D---~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
.+..++|||||++|+.++.. ..|.+|++.++.. ..+.. ........+.|+|||++|+.++
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~--------------~~l~~---~~~~~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA--------------VQLTE---GKGDNTFGGFISTDERAFFYVK 99 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE--------------EECCC---SSCBCTTTCEECTTSSEEEEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE--------------EEeec---CCCCccccceECCCCCEEEEEE
Confidence 37788999999998776543 3678888765431 11111 1111123368999999999999
Q ss_pred CCCeEEEEECCCceeE-eecCCCCCEEE-------------------EEecCCCCEEEEE-----ecCCeEEEEeCCCcc
Q 010794 232 YDGQARIWSTNGDLKC-TLSKHKGPIFS-------------------LKWNKKGDYLLTG-----SCDKTAIVWDVKTEE 286 (501)
Q Consensus 232 ~dg~i~iw~~~~~~~~-~~~~h~~~V~~-------------------l~~~~~~~~l~s~-----s~D~~i~iwd~~~~~ 286 (501)
.++.|++|+..+.... ....+...... +.|+|++++++.+ ..+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 100 NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 9999999998764333 33333332222 3567777766544 356789999998887
Q ss_pred eeEeeeeccCCeEEEecCC--CceEEEecCC------CeEEEEEcCCCcceeeecCC-CCceeEEEEcCCCCEEEEEeCC
Q 010794 287 WKQQFEFHSGPTLDVDWRN--NVSFATSSTD------NMIYVCKIGENRPIKTFAGH-QGEVNCVKWDPTGSLLASCSDD 357 (501)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d------~~i~~~~~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~D 357 (501)
..... .+...+..+.|.+ ...++..+.+ ..|+++++............ ...+..++|+|+|+.|+.++.+
T Consensus 180 ~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 180 LEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred EEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecC
Confidence 65444 3445566777765 3334443322 46888888665433333321 2357889999999987777554
Q ss_pred -----CeEEEEeCCCCceeeecccCCCCEEEEEEcC-CCCCCCCCCCcEEEEEEe----------------CCCeEEEEe
Q 010794 358 -----VTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASAS----------------FDSTVKLWD 415 (501)
Q Consensus 358 -----g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p-~g~~~~~~~~~~~l~sgs----------------~dg~i~iwd 415 (501)
+.|.+||+.+++..... ... ... +.|+| +|. ++++++ .++.|++||
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~-~~~-~~~-~~~s~~dg~---------~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 259 KGQTDRVIYKANPETLENEEVM-VMP-PCS-HLMSNFDGS---------LMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp TTTCCEEEEEECTTTCCEEEEE-ECC-SEE-EEEECSSSS---------EEEEEECCC----------CCCCCCEEEEEE
T ss_pred CCCccceEEEEECCCCCeEEee-eCC-CCC-CCccCCCCc---------eEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 45999999877643321 111 123 88999 875 444433 347899999
Q ss_pred CCCCeEEEEeeCCCC-----------CeEEEEECCCCCEEEEEeC-CCcEEE--EeCCCCe
Q 010794 416 VELGKLLYSLNGHRE-----------PVYSLAFSPTGEYLASGSL-DKSMHI--WSLKEGK 462 (501)
Q Consensus 416 ~~~~~~~~~~~~h~~-----------~v~~l~~spdg~~lasgs~-Dg~i~i--w~~~~~~ 462 (501)
+.+++.. .+..+.. .+..++|+|+|++|+.++. ++...+ +++.++.
T Consensus 327 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 327 TKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp TTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred cccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 9887643 3444443 2567899999999887764 454444 4555544
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=2.1e-17 Score=175.91 Aligned_cols=318 Identities=11% Similarity=0.108 Sum_probs=192.2
Q ss_pred eEEccCCccc-----eeEEEECCCCCEEEEEECC---------CcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccC
Q 010794 146 VTILEGHTSE-----VCACAWSPAGSLLASGSGD---------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK 211 (501)
Q Consensus 146 ~~~l~~H~~~-----V~~~~~sp~~~~l~sgs~D---------~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (501)
..++.+|... ...++|||||++|+.++.+ +.+.+||+.++... . ...+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------------~----l~~~ 110 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------------T----EERI 110 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------------C----SSCC
T ss_pred EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------------E----cccC
Confidence 3456666543 2447899999999998876 55679999876421 1 1123
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEee--cCCCCCE-----------------EEEEecCCCCEEEEEe
Q 010794 212 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL--SKHKGPI-----------------FSLKWNKKGDYLLTGS 272 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~--~~h~~~V-----------------~~l~~~~~~~~l~s~s 272 (501)
...+...+|||||+.|+.+. ++.|++|+..+.....+ .++...+ .++.|+|+|++|+.++
T Consensus 111 ~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 111 PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 45689999999999999884 68999999865433332 2333333 2489999999999888
Q ss_pred cCCe-EEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCC---Cc--ceeeec------CCCCcee
Q 010794 273 CDKT-AIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---NR--PIKTFA------GHQGEVN 340 (501)
Q Consensus 273 ~D~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---~~--~~~~~~------~h~~~v~ 340 (501)
.|.+ +.+|++....... .+......+.+..... ......|++|++.+ +. ....+. +|...+.
T Consensus 190 ~d~~~v~~~~~~~~~~~~---~~~~~~~~~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 190 FNDTEVPLIEYSFYSDES---LQYPKTVRVPYPKAGA---VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EECTTCCEEEEEECCSTT---CSSCEEEEEECCBTTS---CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEE
T ss_pred EcccCCceEEEEeecCCC---CCCCcceeecCCCCcC---cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEE
Confidence 7665 8888753211000 0111122222221100 01122688999987 62 222333 4788899
Q ss_pred EEEEcCCCCEEEEEeC----CCeEEEEeCCCCc----ee--eec--ccCCCCEE-----EEEEcCCCCCCCCCCCcEEEE
Q 010794 341 CVKWDPTGSLLASCSD----DVTAKIWNMKQDK----YV--HDL--REHSKEIY-----TIRWSPTGSGTNNPNQQLILA 403 (501)
Q Consensus 341 ~v~~~~~~~~l~s~s~----Dg~i~iwd~~~~~----~~--~~~--~~~~~~v~-----~i~~~p~g~~~~~~~~~~~l~ 403 (501)
.++|+|||++++.... +..|++||+.+++ +. ..+ ..+...+. .+.|+|+|. .++.
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~--------~l~~ 335 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN--------SFYK 335 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS--------EEEE
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC--------EEEE
Confidence 9999999997665532 3479999998876 22 222 23443333 678999986 2331
Q ss_pred EEe-CC--CeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEE-EEeC----CCcEEEE--eCCCCeeEEEEec----
Q 010794 404 SAS-FD--STVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA-SGSL----DKSMHIW--SLKEGKIVKTYTG---- 469 (501)
Q Consensus 404 sgs-~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la-sgs~----Dg~i~iw--~~~~~~~~~~~~~---- 469 (501)
..+ .+ ..|.+||+..+... .+......|..+.+ +|++.|+ +++. .+...|| ++..+.....++.
T Consensus 336 ~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~ 413 (740)
T 4a5s_A 336 IISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNP 413 (740)
T ss_dssp EEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTST
T ss_pred EEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCC
Confidence 444 34 46888898866554 44444455666542 3466554 4444 2334444 5544433223332
Q ss_pred -CCCEEEEEECCCCCEEEEEECC---CeEEEEE
Q 010794 470 -NGGIFEVCWNKEGDKIAACFAN---HTVCVLD 498 (501)
Q Consensus 470 -~~~i~~~~ws~~g~~la~~~~d---~~v~v~~ 498 (501)
......++|+|+|++++....+ ..+.+++
T Consensus 414 ~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~ 446 (740)
T 4a5s_A 414 ERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS 446 (740)
T ss_dssp TTBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCCCCEEEEEE
Confidence 2458899999999988766544 2445554
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1.4e-16 Score=152.64 Aligned_cols=266 Identities=11% Similarity=0.103 Sum_probs=189.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeee
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 292 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 292 (501)
..|.+++|++++..+++.+.++.++.| .+.....+..+...+.+++|+|+++.++++..++.|.+||+.+++......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 447778889888877777888899999 334445566677778999999999987888889999999998887665443
Q ss_pred eccCCeEEEecCCCc-eEEEecCC----CeEEEEEcCCCcceeeec--CCCCceeEEEEcCCCCEEEEEeC------CCe
Q 010794 293 FHSGPTLDVDWRNNV-SFATSSTD----NMIYVCKIGENRPIKTFA--GHQGEVNCVKWDPTGSLLASCSD------DVT 359 (501)
Q Consensus 293 ~~~~~~~~~~~~~~~-~~~~~~~d----~~i~~~~~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~------Dg~ 359 (501)
.+...+..+.+.++. .+++...+ +.|++|+.........+. .+...+.+++++|+|+++++... .+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 445667788876544 45555555 689999987765443332 23457899999999998887664 356
Q ss_pred EEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEE--------EeeCCCC
Q 010794 360 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLY--------SLNGHRE 430 (501)
Q Consensus 360 i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~--------~~~~h~~ 430 (501)
|..|+..+++... +......+..++|+|++. .++++.+.++.|.+|++.. +..+. .+.++ .
T Consensus 164 l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~--------~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~ 233 (333)
T 2dg1_A 164 VYYVSPDFRTVTP-IIQNISVANGIALSTDEK--------VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-E 233 (333)
T ss_dssp EEEECTTSCCEEE-EEEEESSEEEEEECTTSS--------EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-S
T ss_pred EEEEeCCCCEEEE-eecCCCcccceEECCCCC--------EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-C
Confidence 6666665544332 222334578899999875 2445556688999999863 32221 12222 4
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-------CEEEEEECCCCCEEEEEECC
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-------GIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-------~i~~~~ws~~g~~la~~~~d 491 (501)
.+..++++++|+++++...++.|.+|+. +++.+..+.... .+.+++|+|+|+.|++++.+
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 6788999999998888888899999998 566666665432 47899999999887766655
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.78 E-value=1.3e-15 Score=155.21 Aligned_cols=310 Identities=14% Similarity=0.091 Sum_probs=210.3
Q ss_pred CCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC-
Q 010794 163 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWST- 241 (501)
Q Consensus 163 p~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~- 241 (501)
|.+.++++...++.|.++|..+++.. ..+.. ...+..+.|+|||+++++++.++.|.+||+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~-------------~~i~~-----g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIK-------------TVLDT-----GYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEE-------------EEEEC-----SSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEE-------------EEEeC-----CCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 44556778888999999998876421 11111 234678999999999999999999999998
Q ss_pred --CCceeEeecCCCCCEEEEEec----CCCCEEEEEec-CCeEEEEeCCCcceeEeeeecc----------C-CeEEEec
Q 010794 242 --NGDLKCTLSKHKGPIFSLKWN----KKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHS----------G-PTLDVDW 303 (501)
Q Consensus 242 --~~~~~~~~~~h~~~V~~l~~~----~~~~~l~s~s~-D~~i~iwd~~~~~~~~~~~~~~----------~-~~~~~~~ 303 (501)
.......+..... ...++|+ |+|+++++++. +++|.++|..+.+.+..+.... . .+..+..
T Consensus 227 ~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 227 MKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp SSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred CCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 3444555554333 4789999 69998876655 6999999999988877665321 1 2223322
Q ss_pred C--CCceEEEecCCCeEEEEEcCCCcceeee-cCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeeccc---
Q 010794 304 R--NNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLRE--- 376 (501)
Q Consensus 304 ~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~--- 376 (501)
. ....++.....+.|.+++......+... .........+.|+|+|++|+++. .++.|.++|+.+++.+..+..
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~ 385 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ 385 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc
Confidence 2 2334455567788999888664322211 12233466889999999876554 678999999999887655433
Q ss_pred --CCCCEEEEEEcCCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCC-------CeEEEEeeCCCCCeEEEEECCCCCEEEE
Q 010794 377 --HSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVEL-------GKLLYSLNGHREPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 377 --~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~spdg~~las 446 (501)
|.+....+ +.|++. .+.+++. .++.|.++|... .+.+.++......-..|.++|++++|.+
T Consensus 386 ~Phpg~g~~~-~~p~~g--------~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 386 TPHPGRGANF-VHPTFG--------PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp SBCCTTCEEE-EETTTE--------EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred CCCCccceee-ECCCCC--------cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEE
Confidence 22211122 355532 2455553 568999999987 6678888765433345789999999887
Q ss_pred EeC-------CCcEEEEeCCCC-----ee-EEEEe---------cCCCEEEEEECCCCCEEEEEEC-----CCeEEEEEe
Q 010794 447 GSL-------DKSMHIWSLKEG-----KI-VKTYT---------GNGGIFEVCWNKEGDKIAACFA-----NHTVCVLDF 499 (501)
Q Consensus 447 gs~-------Dg~i~iw~~~~~-----~~-~~~~~---------~~~~i~~~~ws~~g~~la~~~~-----d~~v~v~~~ 499 (501)
... .++|.+||+.+. .. ...+. +...+..+.|+|+|+++.++.. ++.|.|+|.
T Consensus 457 ~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 457 DATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp ECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred ecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 653 359999999876 21 12332 2335899999999998877643 688999985
Q ss_pred e
Q 010794 500 R 500 (501)
Q Consensus 500 ~ 500 (501)
+
T Consensus 537 ~ 537 (567)
T 1qks_A 537 K 537 (567)
T ss_dssp T
T ss_pred C
Confidence 3
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=3.5e-16 Score=150.71 Aligned_cols=259 Identities=14% Similarity=0.149 Sum_probs=174.4
Q ss_pred cceeEEEECCCCCEEEEEE---------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 154 SEVCACAWSPAGSLLASGS---------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs---------~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
..+..++| ||++|+... .++.|.+|++.++.. +.+ ..+..++|||||
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~--------------~~l--------~~~~~~~~SpDg 70 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR--------------RFI--------ENATMPRISPDG 70 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE--------------EEE--------ESCEEEEECTTS
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce--------------EEc--------ccCCCeEECCCC
Confidence 34677778 888776542 256789999876431 111 247889999999
Q ss_pred CEEEEEeCC---C--eEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecC-------------------------
Q 010794 225 TLLATGSYD---G--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD------------------------- 274 (501)
Q Consensus 225 ~~l~sg~~d---g--~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D------------------------- 274 (501)
++|+.++.+ + .|.+|++.+.....+..+.. +..++|+|+|++|+.++.+
T Consensus 71 ~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 149 (347)
T 2gop_A 71 KKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDG 149 (347)
T ss_dssp SEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------
T ss_pred CEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccC
Confidence 999987754 3 47777877655444444444 8999999999998887643
Q ss_pred --CeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCC---------CeEEEEEcCCCcceeeecCCCCceeEEE
Q 010794 275 --KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD---------NMIYVCKIGENRPIKTFAGHQGEVNCVK 343 (501)
Q Consensus 275 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~i~~~~~~~~~~~~~~~~h~~~v~~v~ 343 (501)
..|.+||+.+++....+.. . .+..+.|.++..++++..+ ..|++++ .+. ...+..+ ..+..+
T Consensus 150 ~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~- 222 (347)
T 2gop_A 150 EKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV- 222 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE-
T ss_pred ccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE-
Confidence 5789999988876344444 3 5666777665544444332 2455555 333 3344444 445444
Q ss_pred EcCCCCEEEEEeCC--------CeEEEEeCCCCceeeecccCCCCEEE-EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010794 344 WDPTGSLLASCSDD--------VTAKIWNMKQDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILASASFDSTVKLW 414 (501)
Q Consensus 344 ~~~~~~~l~s~s~D--------g~i~iwd~~~~~~~~~~~~~~~~v~~-i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iw 414 (501)
+|+|+.|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++.++.++||
T Consensus 223 -spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg----------~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 223 -DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK----------VYFTLFEEGSVNLY 288 (347)
T ss_dssp -EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE----------EEEEEEETTEEEEE
T ss_pred -CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc----------EEEEEecCCcEEEE
Confidence 9999998887754 3678888 55544444455667775 8897 64 57788899999999
Q ss_pred eCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcE-EEEeCCCCee
Q 010794 415 DVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSM-HIWSLKEGKI 463 (501)
Q Consensus 415 d~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i-~iw~~~~~~~ 463 (501)
+.+++.. .+..+...|.+++|+| .++++++.++.. .+|.+. ++.
T Consensus 289 -~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~ 333 (347)
T 2gop_A 289 -IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEE 333 (347)
T ss_dssp -EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSE
T ss_pred -EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcE
Confidence 8766654 3444577899999999 677777777654 777665 553
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=2.7e-16 Score=151.45 Aligned_cols=255 Identities=11% Similarity=0.125 Sum_probs=174.4
Q ss_pred CeEEEEECCCCCEEEEEe---------CCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecC---C--eEEE
Q 010794 214 DVTTLDWNGEGTLLATGS---------YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---K--TAIV 279 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~---------~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D---~--~i~i 279 (501)
.+...++ ||++++... .++.|++|+..+.....+ ..+..++|+|+|++|+.++.+ + .|.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 4667777 888877642 356889999876554444 567889999999999887754 3 3788
Q ss_pred EeCCCcceeEeeeeccCCeEEEecCCC-ceEEEecC---------------------------CCeEEEEEcCCCcceee
Q 010794 280 WDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSST---------------------------DNMIYVCKIGENRPIKT 331 (501)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------------------d~~i~~~~~~~~~~~~~ 331 (501)
||+.+++......... +..+.|.++ ..++.++. ...|++|++..+..+..
T Consensus 90 ~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 167 (347)
T 2gop_A 90 ADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE 167 (347)
T ss_dssp EETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEE
T ss_pred EECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEee
Confidence 8988877655544433 777888644 44554432 25688999987766344
Q ss_pred ecCCCCceeEEEEcCCCCEEEEEeCCC-------eEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEE
Q 010794 332 FAGHQGEVNCVKWDPTGSLLASCSDDV-------TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS 404 (501)
Q Consensus 332 ~~~h~~~v~~v~~~~~~~~l~s~s~Dg-------~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~s 404 (501)
+.. . .+..++|+|+| ++++++.++ ...||.+.++. ...+..+ ..+..+ +|+|. .|+.
T Consensus 168 l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~---------~l~~ 231 (347)
T 2gop_A 168 FEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGE---------RILL 231 (347)
T ss_dssp EEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSS---------CEEE
T ss_pred ecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCC---------EEEE
Confidence 444 3 78899999999 887776542 34555444443 3333333 444444 88886 3444
Q ss_pred EeCC--------CeEEEEeCCCCeEEEEeeCCCCCeEE-EEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEE
Q 010794 405 ASFD--------STVKLWDVELGKLLYSLNGHREPVYS-LAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFE 475 (501)
Q Consensus 405 gs~d--------g~i~iwd~~~~~~~~~~~~h~~~v~~-l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~ 475 (501)
++.+ ..|.+|| +++......+|...+.. +.|+ +| ++++++.++.++|| +.+++....+.+.+.+.+
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~ 306 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMG 306 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEE
T ss_pred EEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEe
Confidence 4432 4788888 56654444556677886 9999 98 99999999999999 877776555556667899
Q ss_pred EEECCCCCEEEEEECCCeE-EEEEe
Q 010794 476 VCWNKEGDKIAACFANHTV-CVLDF 499 (501)
Q Consensus 476 ~~ws~~g~~la~~~~d~~v-~v~~~ 499 (501)
++|+| ..+++++.++.. .||.+
T Consensus 307 ~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 307 FDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEESS--SEEEEEECSSSCCEEEEE
T ss_pred eeeeC--cEEEEEcCCCChHHheEe
Confidence 99999 677777666654 66654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=6.5e-16 Score=145.43 Aligned_cols=233 Identities=13% Similarity=0.115 Sum_probs=169.4
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 213 KDVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 213 ~~V~~~~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
....+++|+|+|+ +++++..++.|..|+..+. ...+..+...+.+++++|+|+.+++...++.|.+||+.+++.....
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 3467899999998 7888888999999999877 6667677788999999999998887777899999998777543211
Q ss_pred eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEE----e------------
Q 010794 292 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC----S------------ 355 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~----s------------ 355 (501)
.... . .....++.++++|+|+++++. +
T Consensus 107 ~~~~------------------------------~-------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~ 149 (296)
T 3e5z_A 107 DSFE------------------------------G-------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEME 149 (296)
T ss_dssp CEET------------------------------T-------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCC
T ss_pred eccC------------------------------C-------CCCCCCCCEEECCCCCEEEECCcccccccccccccccc
Confidence 1000 0 011246678999999988873 3
Q ss_pred -CCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeE---EEEeeCCCC
Q 010794 356 -DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKL---LYSLNGHRE 430 (501)
Q Consensus 356 -~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~---~~~~~~h~~ 430 (501)
..+.|..++.. ++ +..+..+......++|+|++. +|++.+.++.|.+|++. .++. ...+..+..
T Consensus 150 ~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~---------~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 218 (296)
T 3e5z_A 150 LPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGN---------LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG 218 (296)
T ss_dssp SSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSC---------EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS
T ss_pred CCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCC---------EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC
Confidence 12355555544 33 333444556678999999986 45777888999999986 5554 233333455
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEE-CCCCCEEEEEECCCeEEEEE
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCW-NKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~w-s~~g~~la~~~~d~~v~v~~ 498 (501)
.+..|+++++|+++++. ++.|.+|+.. |+.+..+.....+.+++| +|+++.|++++.++ +..++
T Consensus 219 ~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~ 283 (296)
T 3e5z_A 219 KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIE 283 (296)
T ss_dssp CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEE
T ss_pred CCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEE
Confidence 67789999999977766 7899999986 777777765444889999 68999999988764 44433
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=7.9e-14 Score=130.86 Aligned_cols=279 Identities=8% Similarity=0.026 Sum_probs=196.5
Q ss_pred cCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEE
Q 010794 150 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 229 (501)
Q Consensus 150 ~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~s 229 (501)
..+...+.+++++|+|+++++...++.|.+|+.. +.. . .. .. ......+.++++.++|.++++
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~---------~--~~-~~----~~~~~~~~~i~~~~~g~l~v~ 73 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI---------T--EY-PL----PTPDAKVMCLTISSDGEVWFT 73 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE---------E--EE-EC----SSTTCCEEEEEECTTSCEEEE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe---------E--Ee-cC----CcccCceeeEEECCCCCEEEe
Confidence 3455679999999999988877778999999875 321 0 00 00 012356889999999998888
Q ss_pred EeCCCeEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCce
Q 010794 230 GSYDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 308 (501)
Q Consensus 230 g~~dg~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (501)
...++.|..|+..+.... .+......+.++++.+++..+++...++.|.+||. ++.... +
T Consensus 74 ~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~----------------- 134 (299)
T 2z2n_A 74 ENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-Y----------------- 134 (299)
T ss_dssp ETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-E-----------------
T ss_pred CCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-e-----------------
Confidence 777899999998754322 22234557899999999988887777889999987 443211 0
Q ss_pred EEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-cccCCCCEEEEEEc
Q 010794 309 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYTIRWS 387 (501)
Q Consensus 309 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~ 387 (501)
....+...+.++++.++|.++++...++.|..||. +++.... +......+..+++.
T Consensus 135 ----------------------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~ 191 (299)
T 2z2n_A 135 ----------------------ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKG 191 (299)
T ss_dssp ----------------------ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred ----------------------cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEEC
Confidence 00112345778999999998888877889999998 5554332 22334567889998
Q ss_pred CCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE-EeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE
Q 010794 388 PTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY-SLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT 466 (501)
Q Consensus 388 p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~ 466 (501)
+++. ++++...++.|.+||. +++... .+..+...+.+|+++++|+++++...++.|.+|+. ++++...
T Consensus 192 ~~g~---------l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 192 NDDA---------LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp TTSS---------EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEE
T ss_pred CCCC---------EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEE
Confidence 8875 4555556789999999 665433 23445567899999999997777767889999998 5654322
Q ss_pred -Eec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 467 -YTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 467 -~~~-~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
... ...+.++++ ++|+..++.. ++.|..++.+
T Consensus 261 ~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 261 PIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp ECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC
T ss_pred eCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcC
Confidence 122 245899999 8888777665 5678777754
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=1.7e-15 Score=146.81 Aligned_cols=270 Identities=11% Similarity=0.111 Sum_probs=176.8
Q ss_pred EEccCCccceeEEEECCCCCEEEEEE----------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeE
Q 010794 147 TILEGHTSEVCACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 216 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~~~l~sgs----------~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 216 (501)
..+..+..+ .++|||||++|+++. .+++|.+||+.+.+... .+.....+ ........
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~----------~i~~~~~~-~~~g~~p~ 111 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEK----------EISLPPKR-VQGLNYDG 111 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEE----------EEEECTTB-CCBCCCGG
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEE----------EEEcCccc-cccCCCcc
Confidence 345555555 899999999999886 36789999987543211 11100000 00123456
Q ss_pred EEEECCCCCEEEEEeC--CCeEEEEECCCceeEee-cCCCCCEEEEEecCCC-CEEEEEecCCeEEEEeCCC-cceeEe-
Q 010794 217 TLDWNGEGTLLATGSY--DGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKT-EEWKQQ- 290 (501)
Q Consensus 217 ~~~~s~~~~~l~sg~~--dg~i~iw~~~~~~~~~~-~~h~~~V~~l~~~~~~-~~l~s~s~D~~i~iwd~~~-~~~~~~- 290 (501)
.++|+|||++|+++.. ++.|.+||+........ ..+.+ ...+.+.|.+ ..+++.+.||++.+|++.. ++....
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 7899999999998874 58999999876533222 22222 2445667766 6788899999999998865 443311
Q ss_pred -----eeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcc--eeeecC------CC----CceeEEEEcCCCCEEEE
Q 010794 291 -----FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFAG------HQ----GEVNCVKWDPTGSLLAS 353 (501)
Q Consensus 291 -----~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~~------h~----~~v~~v~~~~~~~~l~s 353 (501)
+.....++....-.....++..+.++.++++++..... +..+.- +. .....++|+|+++.++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 191 RSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp ECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred cccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 11111111100001123344455678899999865432 111110 00 11123789999877665
Q ss_pred EeC-----------CCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--e
Q 010794 354 CSD-----------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--K 420 (501)
Q Consensus 354 ~s~-----------Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--~ 420 (501)
+.. .+.|.+||+.+++.+..+..+. ...++|+|+|. +|++++. +.|.+||..++ +
T Consensus 271 ~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~---------~l~v~n~-~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 271 FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN---------LMLTLDG-GNVNVYDISQPEPK 338 (361)
T ss_dssp EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT---------EEEEECS-SCEEEEECSSSSCE
T ss_pred EEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC---------EEEEeCC-CeEEEEECCCCcce
Confidence 432 3589999999999998887776 89999999986 5666665 99999999999 9
Q ss_pred EEEEeeCCCCCeEEEEECCCCC
Q 010794 421 LLYSLNGHREPVYSLAFSPTGE 442 (501)
Q Consensus 421 ~~~~~~~h~~~v~~l~~spdg~ 442 (501)
.+.++..+......++|+|+|.
T Consensus 339 ~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 339 LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEeccCCCCcEEEEecCCCC
Confidence 9988866777789999999986
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=2e-16 Score=166.37 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=168.3
Q ss_pred CCCCeEEEEECCCCCEEEEE--eCCCeEEEEEC-CCceeEeecCCCCCEE---------EEEec--CCCCE-EEEEec-C
Q 010794 211 KSKDVTTLDWNGEGTLLATG--SYDGQARIWST-NGDLKCTLSKHKGPIF---------SLKWN--KKGDY-LLTGSC-D 274 (501)
Q Consensus 211 ~~~~V~~~~~s~~~~~l~sg--~~dg~i~iw~~-~~~~~~~~~~h~~~V~---------~l~~~--~~~~~-l~s~s~-D 274 (501)
+...|..++|++++.++++. +.++...||.. .+.....+..|...+. ...|+ |+|++ |+.++. +
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~ 101 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD 101 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence 46679999999988888877 56888999984 4444556666666655 55565 99988 665543 4
Q ss_pred CeEEEEeCC--C-cceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC-----CCCceeEEEEcC
Q 010794 275 KTAIVWDVK--T-EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-----HQGEVNCVKWDP 346 (501)
Q Consensus 275 ~~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-----h~~~v~~v~~~~ 346 (501)
..|.+|++. + +.. ..+.. |...+.+++|+|
T Consensus 102 ~~l~~~~~~~~g~~~~------------------------------------------~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVP------------------------------------------RPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp CCEEEECTTSTTCCCC------------------------------------------EECSCCCCSTTCEEEEEEEEET
T ss_pred CeEEEEcCCCCCCCCC------------------------------------------EeccCCccCCCCccccCcEECC
Confidence 455555544 1 221 11222 556678999999
Q ss_pred CCCEEEEEeCC----------CeEEEEeCCC------Cceeeecc-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-
Q 010794 347 TGSLLASCSDD----------VTAKIWNMKQ------DKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFD- 408 (501)
Q Consensus 347 ~~~~l~s~s~D----------g~i~iwd~~~------~~~~~~~~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d- 408 (501)
||+.|++++.+ ..|++||+.+ +.. ..+. .+...+..++|+|+|. .|+.++.+
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~---------~la~~~~~~ 209 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGR---------QAVWLAWDH 209 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSS---------EEEEEEECT
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCC---------EEEEEECCC
Confidence 99999998877 5899999987 443 3444 5556778889999997 56665544
Q ss_pred -------CeEEEEeCC-CC---eEEEEeeCCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCeeEEEEecCCC---
Q 010794 409 -------STVKLWDVE-LG---KLLYSLNGHREPVYSLAFSPTGEYLASGSLDK--SMHIWSLKEGKIVKTYTGNGG--- 472 (501)
Q Consensus 409 -------g~i~iwd~~-~~---~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg--~i~iw~~~~~~~~~~~~~~~~--- 472 (501)
..|++||+. ++ +......+|...+..++|+|||+++++++.++ .|.+|++.+++.......+..
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC
Confidence 479999998 57 44444455678899999999999888888888 677777767765544333221
Q ss_pred ------EEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 473 ------IFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 473 ------i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
+..++|+|+|++++++.. +.+.||.+
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 457889999999999988 88888854
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=1.8e-15 Score=144.95 Aligned_cols=265 Identities=11% Similarity=0.061 Sum_probs=178.7
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
..|.+++|+|++..+++.+.++.++.|.-. ....+. .+...+.+++|+++|++++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~ 65 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----------------PWLEIS----KKGLQLEGLNFDRQGQLFLLDVFE 65 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----------------EEEEEE----SSCCCEEEEEECTTSCEEEEETTT
T ss_pred cccceeeecCCccceeEEeecccCcccccc----------------eeEEEe----ccCccccCcEECCCCCEEEEECCC
Confidence 347788899998888887888999999311 011111 123457899999999988888899
Q ss_pred CeEEEEECCCceeEe-ecCCCCCEEEEEecCCCCEEEEEecC----CeEEEEeCCCcceeEeee--eccCCeEEEecCCC
Q 010794 234 GQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNN 306 (501)
Q Consensus 234 g~i~iw~~~~~~~~~-~~~h~~~V~~l~~~~~~~~l~s~s~D----~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~ 306 (501)
+.|.+|+..+..... ...+...+.+++|+|+++.+++...+ +.|.+||+.++.....+. .....+..+.+.++
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 999999987544433 33566789999999999888877766 689999998876543332 12234566666544
Q ss_pred ceE-EEecC------CCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCCC-Cceeee----
Q 010794 307 VSF-ATSST------DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQ-DKYVHD---- 373 (501)
Q Consensus 307 ~~~-~~~~~------d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~~-~~~~~~---- 373 (501)
..+ ++... .+.|+.++...... ..+..+...+.+++|+|+++.| ++.+.++.|.+|++.+ +..+..
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce
Confidence 444 44332 24566665544333 2232333457899999999855 5556688999999864 332211
Q ss_pred ----cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC------CeEEEEECCCCCE
Q 010794 374 ----LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE------PVYSLAFSPTGEY 443 (501)
Q Consensus 374 ----~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~------~v~~l~~spdg~~ 443 (501)
+..+ ..+..++++++|. ++++...++.|.+||. .++.+..+..+.. .+.+++|+|++..
T Consensus 225 ~~~~~~~~-~~~~~i~~d~~G~---------l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~ 293 (333)
T 2dg1_A 225 IPYYFTGH-EGPDSCCIDSDDN---------LYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQ 293 (333)
T ss_dssp EEEECCSS-SEEEEEEEBTTCC---------EEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCE
T ss_pred EEEecCCC-CCCCceEECCCCC---------EEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCE
Confidence 1111 3567889998875 5566667889999998 4666666654432 6899999999877
Q ss_pred EEEEeCC
Q 010794 444 LASGSLD 450 (501)
Q Consensus 444 lasgs~D 450 (501)
|+.++.+
T Consensus 294 L~v~~~~ 300 (333)
T 2dg1_A 294 LIICSND 300 (333)
T ss_dssp EEEEEEC
T ss_pred EEEEeCc
Confidence 7655544
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=2.7e-15 Score=159.01 Aligned_cols=253 Identities=11% Similarity=0.120 Sum_probs=164.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-----eEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcce
Q 010794 213 KDVTTLDWNGEGTLLATGSYDG-----QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 287 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg-----~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 287 (501)
..+..++|||||++|+.++.++ .|++|++.+............+.+++|+|+|+.|+.++.++. ....
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~-------~~~~ 197 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQ-------DGKS 197 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCC-------SSCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCc-------cccc
Confidence 3588999999999998776544 899999876544332222223567999999999998887754 0000
Q ss_pred eEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcc--eeeec--CCCCceeEEEEcCCCCEEEEEeC-----CC
Q 010794 288 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFA--GHQGEVNCVKWDPTGSLLASCSD-----DV 358 (501)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~--~h~~~v~~v~~~~~~~~l~s~s~-----Dg 358 (501)
.+... .......|++|++.++.. ...+. .|...+..+.|+|||++|+.++. +.
T Consensus 198 -------~~~~~-----------~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 259 (710)
T 2xdw_A 198 -------DGTET-----------STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (710)
T ss_dssp -------SSSCC-----------CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred -------ccccc-----------ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCcc
Confidence 00000 001122355555554431 12222 24556788999999999887765 56
Q ss_pred eEEEEeCCC------Cc-eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC---CCeEEEEeCCCCe--EEEEee
Q 010794 359 TAKIWNMKQ------DK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF---DSTVKLWDVELGK--LLYSLN 426 (501)
Q Consensus 359 ~i~iwd~~~------~~-~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~---dg~i~iwd~~~~~--~~~~~~ 426 (501)
.|++||+.+ +. ....+..+...+.. .|+|+|. .+++.+.. .+.|.+||+.++. ....+.
T Consensus 260 ~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~--------~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 260 RLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGT--------VFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp EEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETT--------EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCC--------EEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 899999876 42 34445555555544 4777775 23333333 3479999998764 123444
Q ss_pred CCCC--CeEEEEECCCCCEEEEEeCCCc--EEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEEC----CCeEEEE
Q 010794 427 GHRE--PVYSLAFSPTGEYLASGSLDKS--MHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFA----NHTVCVL 497 (501)
Q Consensus 427 ~h~~--~v~~l~~spdg~~lasgs~Dg~--i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~----d~~v~v~ 497 (501)
.|.. .+..++|++++.+++++..|+. |.+|++.+|+.+..+... +.+..++++|+++.|+.... .++|.+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 4544 6888999988888889988884 667787778776666543 45788999999987775543 3678888
Q ss_pred Ee
Q 010794 498 DF 499 (501)
Q Consensus 498 ~~ 499 (501)
|+
T Consensus 411 d~ 412 (710)
T 2xdw_A 411 DL 412 (710)
T ss_dssp ET
T ss_pred EC
Confidence 86
No 184
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=3.8e-16 Score=152.87 Aligned_cols=247 Identities=11% Similarity=0.014 Sum_probs=168.9
Q ss_pred CceeEeecCCCCCEEE-----EEecCCCCEEEEEec-CC--eEEEEeCCCcceeEeeeeccCCeEEEecCC-CceEEEec
Q 010794 243 GDLKCTLSKHKGPIFS-----LKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSS 313 (501)
Q Consensus 243 ~~~~~~~~~h~~~V~~-----l~~~~~~~~l~s~s~-D~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (501)
+.....+..|...+.. .+|+|+|++|+.++. ++ .|.+||+.+++..+....+...+....|.+ ...++.++
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe
Confidence 4455567777766666 789999999998887 66 488889998887766655554444455654 45677777
Q ss_pred CCCeEEEEEcCCCcceeeecCCCCceeEEE--EcCCCCEEEEE----------------------eCCCeEEEEeCCCCc
Q 010794 314 TDNMIYVCKIGENRPIKTFAGHQGEVNCVK--WDPTGSLLASC----------------------SDDVTAKIWNMKQDK 369 (501)
Q Consensus 314 ~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s~----------------------s~Dg~i~iwd~~~~~ 369 (501)
.++.+++|++.++.....+..+...+.... ++|++++++.. ..+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 788999999998887766666666554444 48999988743 245789999998876
Q ss_pred eeeecccCCCCEEEEEEcC-CCCCCCCCCCcEEEEEEeC------CCeEEEEeCCCCeEEEEeeCCC--CCeEEEEECCC
Q 010794 370 YVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASF------DSTVKLWDVELGKLLYSLNGHR--EPVYSLAFSPT 440 (501)
Q Consensus 370 ~~~~~~~~~~~v~~i~~~p-~g~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spd 440 (501)
.. .+..+...+..+.|+| +|. .|+..+. ...|.++|+..+.. ..+..+. ..+..++||||
T Consensus 180 ~~-~l~~~~~~~~~~~~sp~dg~---------~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 180 ST-VILQENQWLGHPIYRPYDDS---------TVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp EE-EEEEESSCEEEEEEETTEEE---------EEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTT
T ss_pred eE-EeecCCccccccEECCCCCC---------EEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCC
Confidence 43 3445566789999999 885 4555443 33788888765443 4444444 35788999999
Q ss_pred CCEEEEEeCC-C----cEEEEeCCCCeeEEEEecCC--C----EEEEEECCCCCEEEEE---------ECCCeEEEEEee
Q 010794 441 GEYLASGSLD-K----SMHIWSLKEGKIVKTYTGNG--G----IFEVCWNKEGDKIAAC---------FANHTVCVLDFR 500 (501)
Q Consensus 441 g~~lasgs~D-g----~i~iw~~~~~~~~~~~~~~~--~----i~~~~ws~~g~~la~~---------~~d~~v~v~~~~ 500 (501)
|+.|+..+.+ + .|++||+.+++........+ . ...++|+|||+.|+.. ..+..|.+||+.
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 9988665432 2 39999999987533222111 0 1123799999988865 445688999863
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=3.2e-15 Score=158.38 Aligned_cols=244 Identities=11% Similarity=0.047 Sum_probs=168.4
Q ss_pred CCccceeEEEECCCCCEEEEEECCC-----cEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 151 GHTSEVCACAWSPAGSLLASGSGDS-----TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 151 ~H~~~V~~~~~sp~~~~l~sgs~D~-----~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
+|...+..++|||||++||.++.++ .|++||+.++... .. .... ..+..++|+|||+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~-----------~~-~~~~------~~~~~~~wspDg~ 183 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL-----------PD-VLER------VKFSCMAWTHDGK 183 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE-----------EE-EEEE------ECSCCEEECTTSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC-----------cc-cccC------cccceEEEEeCCC
Confidence 4666789999999999998766543 8999999876421 00 0000 1256789999999
Q ss_pred EEEEEeCCCe----------------EEEEECCCce---eEee--cCCCCCEEEEEecCCCCEEEEEec-----CCeEEE
Q 010794 226 LLATGSYDGQ----------------ARIWSTNGDL---KCTL--SKHKGPIFSLKWNKKGDYLLTGSC-----DKTAIV 279 (501)
Q Consensus 226 ~l~sg~~dg~----------------i~iw~~~~~~---~~~~--~~h~~~V~~l~~~~~~~~l~s~s~-----D~~i~i 279 (501)
.|+.++.++. |++|++.+.. ...+ ..|...+.++.|+|+|++|+.++. +..|++
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~ 263 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWY 263 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEE
T ss_pred EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEE
Confidence 9999988766 9999986533 2222 235566889999999999887765 456777
Q ss_pred EeCCC------cceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEE
Q 010794 280 WDVKT------EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 353 (501)
Q Consensus 280 wd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 353 (501)
||+.+ +.. ....+..+...+.. .|+|+|..|+.
T Consensus 264 ~d~~~~~~~~~~~~----------------------------------------~~~~l~~~~~~~~~-~~s~dg~~l~~ 302 (710)
T 2xdw_A 264 CDLQQESNGITGIL----------------------------------------KWVKLIDNFEGEYD-YVTNEGTVFTF 302 (710)
T ss_dssp EEGGGSSSSSCSSC----------------------------------------CCEEEECSSSSCEE-EEEEETTEEEE
T ss_pred EECcccccccCCcc----------------------------------------ceEEeeCCCCcEEE-EEeccCCEEEE
Confidence 77654 210 11222333333333 47888887776
Q ss_pred EeCC----CeEEEEeCCCCce--eeecccCCC--CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCe--EEEEeCCCCeEEE
Q 010794 354 CSDD----VTAKIWNMKQDKY--VHDLREHSK--EIYTIRWSPTGSGTNNPNQQLILASASFDST--VKLWDVELGKLLY 423 (501)
Q Consensus 354 ~s~D----g~i~iwd~~~~~~--~~~~~~~~~--~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~--i~iwd~~~~~~~~ 423 (501)
.+.. +.|.+||+.++.. ...+..+.. .+..+.|++.+. ++++...++. |.+|++.+++.+.
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------lv~~~~~~g~~~l~~~~~~~g~~~~ 373 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF---------LVLCYLHDVKNTLQLHDLATGALLK 373 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE---------EEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE---------EEEEEEECCEEEEEEEECCCCCEEE
Confidence 6553 3699999887642 234444433 577888886543 7788888885 5667777788778
Q ss_pred EeeCCCCCeEEEEECCCCCEEEE-Ee---CCCcEEEEeCCCCe
Q 010794 424 SLNGHREPVYSLAFSPTGEYLAS-GS---LDKSMHIWSLKEGK 462 (501)
Q Consensus 424 ~~~~h~~~v~~l~~spdg~~las-gs---~Dg~i~iw~~~~~~ 462 (501)
.+..+...|..++++|++..|+. .+ ..++|++||+.+++
T Consensus 374 ~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 374 IFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88878778899999999976653 23 34789999998876
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=1.5e-14 Score=136.16 Aligned_cols=260 Identities=13% Similarity=0.103 Sum_probs=167.4
Q ss_pred ceEEccCCccceeEEEECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC
Q 010794 145 DVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 223 (501)
Q Consensus 145 ~~~~l~~H~~~V~~~~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~ 223 (501)
.+..+..+.....+++|+|+|+ +++++..++.|.+|+..++ . ..+. .+...+.+++|+++
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--------------~~~~----~~~~~~~~l~~~~d 79 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--------------SPEM----HPSHHQNGHCLNKQ 79 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--------------EEEE----SSCSSEEEEEECTT
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--------------EEEE----CCCCCcceeeECCC
Confidence 3455666677788999999998 7888888999999997653 1 0111 12356899999999
Q ss_pred CCEEEEEeCCCeEEEEEC-CCceeEeecCC----CCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 224 GTLLATGSYDGQARIWST-NGDLKCTLSKH----KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~-~~~~~~~~~~h----~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
|+++++...++.|.+|+. .+......... ...+..++++|+|+.+++.+..++...+...... .
T Consensus 80 g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~----~------- 148 (296)
T 3e5z_A 80 GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE----M------- 148 (296)
T ss_dssp CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC----C-------
T ss_pred CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc----c-------
Confidence 998888777899999998 44433222211 1245678899999887774321110000000000 0
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCC-CCce---eeec
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK-QDKY---VHDL 374 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~-~~~~---~~~~ 374 (501)
....+.|+.++.. ..+..+..+....+.++|+|+++++++.+.++.|.+|++. .+.. ...+
T Consensus 149 -------------~~~~~~l~~~~~~--g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 149 -------------ELPGRWVFRLAPD--GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp -------------CSSSCEEEEECTT--SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE
T ss_pred -------------cCCCcEEEEECCC--CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe
Confidence 0000112222211 1122223344567889999999988888888999999986 4443 2222
Q ss_pred ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEE-CCCCCEEEEEeCCCcE
Q 010794 375 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF-SPTGEYLASGSLDKSM 453 (501)
Q Consensus 375 ~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-spdg~~lasgs~Dg~i 453 (501)
..+...+..++++++|. ++++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|.+++.++ |
T Consensus 214 ~~~~~~p~~i~~d~~G~---------l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l 279 (296)
T 3e5z_A 214 TVEPGKTDGLRVDAGGL---------IWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-F 279 (296)
T ss_dssp CCSSSCCCSEEEBTTSC---------EEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-E
T ss_pred eCCCCCCCeEEECCCCC---------EEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-E
Confidence 22344556788888875 34433 7899999987 778778877766 899999 68999998888764 5
Q ss_pred EEEeCCCCee
Q 010794 454 HIWSLKEGKI 463 (501)
Q Consensus 454 ~iw~~~~~~~ 463 (501)
..++..+.++
T Consensus 280 ~~~~~~~~~~ 289 (296)
T 3e5z_A 280 WSIETNVRGL 289 (296)
T ss_dssp EEEECSCCBC
T ss_pred EEEEcccccc
Confidence 5566666554
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=1.6e-14 Score=133.65 Aligned_cols=235 Identities=8% Similarity=-0.022 Sum_probs=162.3
Q ss_pred CEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCC-ceEEEecCCCeEEEEEcCCCcceeee
Q 010794 255 PIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTF 332 (501)
Q Consensus 255 ~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~ 332 (501)
...+++++++++.++ +.+.++.|.+||..+.............+..+.+..+ ..+++.. ++.|++|+....... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 568899999998766 5477899999997665432221122233445555433 3455555 889999987655432 23
Q ss_pred c-CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeE
Q 010794 333 A-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 411 (501)
Q Consensus 333 ~-~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i 411 (501)
. .....+.+++++|+|+++++...++.|.+|+..+................++++|++. ++++...++.|
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~---------l~v~~~~~~~i 173 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN---------VYVTDTDNNRV 173 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC---------EEEEEGGGTEE
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC---------EEEEECCCCEE
Confidence 2 2335688999999999888888889999998655443322222233567788888774 55666667899
Q ss_pred EEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE-ecCCCEEEEEECCCCCEEEEEEC
Q 010794 412 KLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY-TGNGGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 412 ~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~-~~~~~i~~~~ws~~g~~la~~~~ 490 (501)
.+||............+...+.+|+++++|.++++...++.|.+|+..+....... .+...+.+++++++|+.+++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 174 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred EEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECC
Confidence 99998876655443334467899999999988888778899999998765433222 12245899999999998889999
Q ss_pred CCeEEEEEee
Q 010794 491 NHTVCVLDFR 500 (501)
Q Consensus 491 d~~v~v~~~~ 500 (501)
++.|.+|++.
T Consensus 254 ~~~v~~~~~~ 263 (270)
T 1rwi_B 254 NDRVVKLTSL 263 (270)
T ss_dssp GTEEEEECCC
T ss_pred CCEEEEEcCC
Confidence 9999999864
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=1.5e-15 Score=160.46 Aligned_cols=245 Identities=10% Similarity=0.055 Sum_probs=163.7
Q ss_pred cCCccceeEEEECCCCCEEE-----EEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 150 EGHTSEVCACAWSPAGSLLA-----SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 150 ~~H~~~V~~~~~sp~~~~l~-----sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
.+|...+.+++|||||++|| +|+.+..|++||+.++..... .... ......++|+|||
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~---------------~~~~--~~~~~~~~wspDg 179 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV---------------DVIE--GGKYATPKWTPDS 179 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS---------------CCBS--CCTTCCCEECTTS
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC---------------cccC--cccccceEEecCC
Confidence 35777899999999999988 455567899999988753200 0000 0112578999999
Q ss_pred CEEEEEeCCCe-------------EEEEECCCce-----eEeecCCCCCEEEEEecCCCCEEEEEecCC----eEEEEeC
Q 010794 225 TLLATGSYDGQ-------------ARIWSTNGDL-----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDK----TAIVWDV 282 (501)
Q Consensus 225 ~~l~sg~~dg~-------------i~iw~~~~~~-----~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~----~i~iwd~ 282 (501)
+.|+.++.+.. |++|++.+.. ......|...+.++.|+|+|++|+.++.++ .|.+|+.
T Consensus 180 ~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 180 KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 99999998876 9999986532 223334566789999999999998887766 6777776
Q ss_pred CCcceeEeeeeccCCeEEEecCCCceEEEec---CCCeEEEEEcCCCcc--eeeecCC--CCceeEEEEcCCCCEEEEEe
Q 010794 283 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSS---TDNMIYVCKIGENRP--IKTFAGH--QGEVNCVKWDPTGSLLASCS 355 (501)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~i~~~~~~~~~~--~~~~~~h--~~~v~~v~~~~~~~~l~s~s 355 (501)
.++.+.. +..+........+.+...++.+. .++.|++|++..+.. ...+..| ...+..++|+ ++.++++..
T Consensus 260 ~~~~~~~-l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 260 GEKDFRL-LVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp TCSSCEE-EEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CCCceEE-eecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 6555443 33333333333344444334433 357899999876543 2333333 4467888988 778899999
Q ss_pred CCCeEEEEeCC-CCceeeecccC-CCCEEEEEEcCCCCCCCCCCCcEEEEEEe---CCCeEEEEeCCCCeE
Q 010794 356 DDVTAKIWNMK-QDKYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILASAS---FDSTVKLWDVELGKL 421 (501)
Q Consensus 356 ~Dg~i~iwd~~-~~~~~~~~~~~-~~~v~~i~~~p~g~~~~~~~~~~~l~sgs---~dg~i~iwd~~~~~~ 421 (501)
.|+..+||.+. .++....+..+ ...+..+.++|++. .++++.+ ..++|++||+.+++.
T Consensus 338 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~--------~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 338 KDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLD--------DAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCS--------EEEEEEEETTEEEEEEEEETTTCCE
T ss_pred ECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCC--------EEEEEEcCCCCCCEEEEEECCCCcE
Confidence 99998888654 34445555444 45566677777654 2333333 347899999988764
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.68 E-value=3.4e-14 Score=135.77 Aligned_cols=279 Identities=10% Similarity=0.029 Sum_probs=189.6
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCceEEEEEeecc-ccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-ceeEeec
Q 010794 173 GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLS 250 (501)
Q Consensus 173 ~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~ 250 (501)
.+++|.+||..+++..... ... ...........+++. +++++++...++.|.+||... ....++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i------------~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEV------------FYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSH------------HHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEECCCCEEhhhh------------HhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC
Confidence 4889999998876422110 000 000111235667764 345556666689999999874 4445554
Q ss_pred CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccC-----CeEEEecCCCceEEEec-CCCeEEEEEcC
Q 010794 251 KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-----PTLDVDWRNNVSFATSS-TDNMIYVCKIG 324 (501)
Q Consensus 251 ~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 324 (501)
.......+++++++..+++...++.|.+||+.+++....+..... ....+.+.....+++.. .++.|.++|..
T Consensus 82 -~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 82 -GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp -CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred -CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 345678999988884444444789999999999988776664430 22334444555566655 48899999999
Q ss_pred CCcceeeecCCCCceeEEEEcCCCCEEEEEeCC----------CeEEEEeCCCCceeeecccC-CCCEEEEEEcCCCCCC
Q 010794 325 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD----------VTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSGT 393 (501)
Q Consensus 325 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D----------g~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~p~g~~~ 393 (501)
+.+.+..+... .....++++|+|++++++..+ +.|.+||..+++....+... ......++++|++.
T Consensus 161 t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~-- 237 (328)
T 3dsm_A 161 TDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD-- 237 (328)
T ss_dssp TTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC--
T ss_pred CCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC--
Confidence 88877666532 345688999999988877665 78999999988877665432 23678999999875
Q ss_pred CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE--eeCCCCCeEEEEECC-CCCEEEEE----eCCCcEEEEeCCCCeeEEE
Q 010794 394 NNPNQQLILASASFDSTVKLWDVELGKLLYS--LNGHREPVYSLAFSP-TGEYLASG----SLDKSMHIWSLKEGKIVKT 466 (501)
Q Consensus 394 ~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~sp-dg~~lasg----s~Dg~i~iw~~~~~~~~~~ 466 (501)
.|..+.. .|.+||..+++.... +.........++++| ++.++++. ..++.|.+|+.. |+++.+
T Consensus 238 -------~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 238 -------TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDE 307 (328)
T ss_dssp -------EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEE
T ss_pred -------EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEE
Confidence 3444433 899999988775311 121235688999999 55666666 578999999998 999888
Q ss_pred EecCCCEEEEEE
Q 010794 467 YTGNGGIFEVCW 478 (501)
Q Consensus 467 ~~~~~~i~~~~w 478 (501)
+........++|
T Consensus 308 i~~G~~P~~~~~ 319 (328)
T 3dsm_A 308 FYVGIIPGAFCW 319 (328)
T ss_dssp EEEEESEEEEEE
T ss_pred EEeccCcceEEE
Confidence 876555666666
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=3.3e-15 Score=157.85 Aligned_cols=238 Identities=11% Similarity=-0.003 Sum_probs=157.0
Q ss_pred CCCeEEEEECCCCCEEE-----EEeCCCeEEEEECCCceeEeecCCCCCE--EEEEecCCCCEEEEEecCCe--------
Q 010794 212 SKDVTTLDWNGEGTLLA-----TGSYDGQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCDKT-------- 276 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~-----sg~~dg~i~iw~~~~~~~~~~~~h~~~V--~~l~~~~~~~~l~s~s~D~~-------- 276 (501)
...+..++|||||++|+ +|+.+..|++|++.+..... ..+...+ ..++|+|+|+.|+.++.|..
T Consensus 120 ~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 120 TVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred CEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 34688999999999998 44445789999987654320 1122222 67899999999999988765
Q ss_pred -----EEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE
Q 010794 277 -----AIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL 351 (501)
Q Consensus 277 -----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l 351 (501)
|++|++.++.... ..+.....|...+.++.|+|||++|
T Consensus 199 ~~~~~v~~~~l~t~~~~~-------------------------------------~lv~~~~~~~~~~~~~~~SpDG~~l 241 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKD-------------------------------------TVVHERTGDPTTFLQSDLSRDGKYL 241 (695)
T ss_dssp GGGCEEEEEETTSCGGGC-------------------------------------EEEECCCCCTTCEEEEEECTTSCCE
T ss_pred CCCCEEEEEECCCCchhc-------------------------------------eEEEecCCCCEEEEEEEECCCCCEE
Confidence 5666554432100 0111222345568899999999998
Q ss_pred EEEeCCC----eEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe---CCCeEEEEeCCCCeE--E
Q 010794 352 ASCSDDV----TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS---FDSTVKLWDVELGKL--L 422 (501)
Q Consensus 352 ~s~s~Dg----~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs---~dg~i~iwd~~~~~~--~ 422 (501)
+.++.++ .|.+|+..++. ...+..+...+....| ++| . ++++.. .++.|.+||+.++.. .
T Consensus 242 ~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g--------~-l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 242 FVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKD--------R-FYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETT--------E-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCC--------c-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 8877666 67777665443 3334444455555555 444 2 344444 358899999987652 2
Q ss_pred EEeeCC--CCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEec--CCCEEEEEECCCCCEEEEEECC----Ce
Q 010794 423 YSLNGH--REPVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTG--NGGIFEVCWNKEGDKIAACFAN----HT 493 (501)
Q Consensus 423 ~~~~~h--~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~d----~~ 493 (501)
..+..+ ...|..++|+ ++.+++++..|+..+||.+. +|+.+..+.. .+.+..++|+|+|+.|+....+ ++
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 233333 4468889998 67788899999988888654 4555555543 3457788999999888755433 67
Q ss_pred EEEEEe
Q 010794 494 VCVLDF 499 (501)
Q Consensus 494 v~v~~~ 499 (501)
|.+||+
T Consensus 390 v~~~d~ 395 (695)
T 2bkl_A 390 IYKTSV 395 (695)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 888885
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=6.8e-14 Score=129.92 Aligned_cols=242 Identities=14% Similarity=0.143 Sum_probs=175.8
Q ss_pred CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 010794 164 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 243 (501)
Q Consensus 164 ~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~ 243 (501)
.+++|++++.|+.|.+||..+++.. ..+... ....+.+++++|+|++++ +.++.|..|+.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~-------------w~~~~~---~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G 65 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV-------------WEYPLE---KGWECNSVAATKAGEILF--SYSKGAKMITRDG 65 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE-------------EEEECC---TTCCCCEEEECTTSCEEE--ECBSEEEEECTTS
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE-------------EEeCCC---ccCCCcCeEECCCCCEEE--eCCCCEEEECCCC
Confidence 4688999999999999998777521 111111 013578899999999998 4578899999988
Q ss_pred ceeEeecCC-CCCEEEEEecCCCCEEEEEec-CCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEE
Q 010794 244 DLKCTLSKH-KGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVC 321 (501)
Q Consensus 244 ~~~~~~~~h-~~~V~~l~~~~~~~~l~s~s~-D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 321 (501)
+....+..+ ...+.++.+.++|+++++.+. ++.+..+|. +++.+..+..
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~---------------------------- 116 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEF---------------------------- 116 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEE----------------------------
T ss_pred CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEec----------------------------
Confidence 877777664 357889999999999999887 777877775 5554433321
Q ss_pred EcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEE
Q 010794 322 KIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLI 401 (501)
Q Consensus 322 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~ 401 (501)
... ..++......+++.++|+++++.+.++.|.+||.. ++.+.++... ...+++...+++. +
T Consensus 117 --~~~-----~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~---------~ 178 (276)
T 3no2_A 117 --ETG-----IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD---------C 178 (276)
T ss_dssp --CCS-----CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC---------E
T ss_pred --cCC-----CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC---------E
Confidence 110 01111234456788999999999999999999988 8888777654 3455666777775 6
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEEeeCCC------CCeEEEEECCCCCEEEEEe--CC------CcEEEEeC-CCCeeEEE
Q 010794 402 LASASFDSTVKLWDVELGKLLYSLNGHR------EPVYSLAFSPTGEYLASGS--LD------KSMHIWSL-KEGKIVKT 466 (501)
Q Consensus 402 l~sgs~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~spdg~~lasgs--~D------g~i~iw~~-~~~~~~~~ 466 (501)
+++++.++.|..+|..+|+.++++..+. ..+..++..++|.++++.. .. +..+++.+ .+|+++..
T Consensus 179 ~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~ 258 (276)
T 3no2_A 179 LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 258 (276)
T ss_dssp EEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE
T ss_pred EEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE
Confidence 7777778899999999999999986432 2378899999999988874 21 23355555 57888888
Q ss_pred EecC
Q 010794 467 YTGN 470 (501)
Q Consensus 467 ~~~~ 470 (501)
+...
T Consensus 259 ~~~~ 262 (276)
T 3no2_A 259 LNDK 262 (276)
T ss_dssp ECCT
T ss_pred ecCc
Confidence 8654
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=2.8e-14 Score=132.12 Aligned_cols=239 Identities=8% Similarity=-0.019 Sum_probs=165.9
Q ss_pred CeEEEEECCCCCEEE-EEeCCCeEEEEECCCceeEee-cCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 214 DVTTLDWNGEGTLLA-TGSYDGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~-sg~~dg~i~iw~~~~~~~~~~-~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
...+++++++|++++ +.+.++.|.+|+..+.....+ ..+...+.++++.++++.+++.. ++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 578899999999777 547789999998765433322 22334578899999998666655 889999998765433221
Q ss_pred eeccCCeEEEecC-CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 010794 292 EFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 370 (501)
Q Consensus 292 ~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~ 370 (501)
......+..+.+. +...+++...++.|++++................+.+++++++|+++++...++.|.+|+......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 1122345566665 334566666778898887655443322223334678999999999888888888999999877654
Q ss_pred eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCC
Q 010794 371 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 450 (501)
Q Consensus 371 ~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 450 (501)
..........+..++++++|. ++++...++.|.+|+............+...+.+++++|+|+++++.+.+
T Consensus 184 ~~~~~~~~~~p~~i~~d~~g~---------l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 184 VVLPFTDITAPWGIAVDEAGT---------VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp EECCCSSCCSEEEEEECTTCC---------EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred EeecccCCCCceEEEECCCCC---------EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 433333335678999999874 56666678899999987654433222334568999999999988998999
Q ss_pred CcEEEEeCCCCe
Q 010794 451 KSMHIWSLKEGK 462 (501)
Q Consensus 451 g~i~iw~~~~~~ 462 (501)
++|++|++...+
T Consensus 255 ~~v~~~~~~~~~ 266 (270)
T 1rwi_B 255 DRVVKLTSLEHH 266 (270)
T ss_dssp TEEEEECCCGGG
T ss_pred CEEEEEcCCCcc
Confidence 999999987544
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.66 E-value=5.2e-14 Score=130.68 Aligned_cols=213 Identities=18% Similarity=0.141 Sum_probs=162.4
Q ss_pred CCCCEEEEEeCCCeEEEEEC-CCceeEeecCCC-CCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 222 GEGTLLATGSYDGQARIWST-NGDLKCTLSKHK-GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 222 ~~~~~l~sg~~dg~i~iw~~-~~~~~~~~~~h~-~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
..+++|++++.++.|.+||. .++....+..+. ..+.++.+.|+|+.|+ +.++.|..||. +++.+..+..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~------ 73 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA------ 73 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC------
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC------
Confidence 34688999999999999998 777777877765 4678899999999888 34788999998 6654433221
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeeccc--
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDKYVHDLRE-- 376 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-Dg~i~iwd~~~~~~~~~~~~-- 376 (501)
++...+.++.+.|+|+++++.+. ++.|..+|. .++.+..+..
T Consensus 74 ----------------------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~ 118 (276)
T 3no2_A 74 ----------------------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET 118 (276)
T ss_dssp ----------------------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC
T ss_pred ----------------------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC
Confidence 11124667888999999998887 778887875 5665554431
Q ss_pred ----CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCc
Q 010794 377 ----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKS 452 (501)
Q Consensus 377 ----~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~ 452 (501)
+......+++.++|. ++++.+.++.|..||.. |+.++++... ..+.++.+.++|++|++++.+++
T Consensus 119 ~~~~~~~~~~~v~~~~~G~---------~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 119 GIERPHAQFRQINKNKKGN---------YLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp SCSSGGGSCSCCEECTTSC---------EEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE
T ss_pred CCCcccccccCceECCCCC---------EEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe
Confidence 112233445566664 77888899999999998 9999998865 34567888999999999999999
Q ss_pred EEEEeCCCCeeEEEEecCC-------CEEEEEECCCCCEEEEEE
Q 010794 453 MHIWSLKEGKIVKTYTGNG-------GIFEVCWNKEGDKIAACF 489 (501)
Q Consensus 453 i~iw~~~~~~~~~~~~~~~-------~i~~~~ws~~g~~la~~~ 489 (501)
|..||..+|+++..+.... .+..++..++|+.+++.+
T Consensus 188 v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 188 FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9999999999998886321 267889999999998885
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=3.2e-12 Score=119.89 Aligned_cols=271 Identities=9% Similarity=0.056 Sum_probs=189.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
..+.++++.++|+++++...++.|.+|+..+.... .+..+...+.++++.+++..+++...++.|..||.. +... .+
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~ 97 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EY 97 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-Ee
Confidence 46789999999998888778899999998744332 223344678999999999888877778899999987 5543 23
Q ss_pred ee--ccCCeEEEecC-CCceEEEecCCCeEEEEEcCCCccee-eecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 010794 292 EF--HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 292 ~~--~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~ 367 (501)
.. ....+..+.+. +...+++...++.|+.++.. +.... .+......+.++++.++++++++...++.|..|+. +
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 22 22345556554 34455666667888888876 33321 22334457889999999998887777889999998 4
Q ss_pred Cceee-ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE-EeeCCCCCeEEEEECCCCCEEE
Q 010794 368 DKYVH-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY-SLNGHREPVYSLAFSPTGEYLA 445 (501)
Q Consensus 368 ~~~~~-~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spdg~~la 445 (501)
+.... .+......+..+++.+++. +.++....+.|.+|+. +++... .+..+...+.+|+++++|++.+
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~---------l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGA---------LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS---------EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred CcEEEeeCCCCCCCcceEEECCCCC---------EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence 44332 1223345678899988774 4555555678999998 454433 3444456789999999999777
Q ss_pred EEeCCCcEEEEeCCCCeeEEE-Ee-cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 446 SGSLDKSMHIWSLKEGKIVKT-YT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 446 sgs~Dg~i~iw~~~~~~~~~~-~~-~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+...++.|..|+. +++.... .. ....+.+++++++|+..++.. + .|..+|.+
T Consensus 246 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 246 TEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred eccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 7767799999998 5554322 22 234578899999998766665 5 78888754
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=2.2e-13 Score=128.98 Aligned_cols=238 Identities=9% Similarity=0.103 Sum_probs=163.5
Q ss_pred CeEEEEECCCCCEEEE-------EeCCCeEEEEECCCceeEeecC-----CCCCEEEEEecCC-CCEEEEEecCCeEEEE
Q 010794 214 DVTTLDWNGEGTLLAT-------GSYDGQARIWSTNGDLKCTLSK-----HKGPIFSLKWNKK-GDYLLTGSCDKTAIVW 280 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~s-------g~~dg~i~iw~~~~~~~~~~~~-----h~~~V~~l~~~~~-~~~l~s~s~D~~i~iw 280 (501)
...+++|+++|.++++ +..++.|.+|+........+.. +...+.+++++++ ++.+++ +....|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEEEE
Confidence 4678999999988888 6778999999965443333322 5567899999999 654444 444578889
Q ss_pred eCCCcceeEe-eeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCC--
Q 010794 281 DVKTEEWKQQ-FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-- 357 (501)
Q Consensus 281 d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D-- 357 (501)
|.. ++.... .... . ......+.+++++++|+++++...+
T Consensus 98 d~~-g~~~~~~~~~~------------------------------~-------~~~~~~~~~i~~d~~g~l~v~~~~~~~ 139 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDS------------------------------E-------GRRMQGCNDCAFDYEGNLWITAPAGEV 139 (314)
T ss_dssp ETT-SCEEECCSBCT------------------------------T-------SCBCBCCCEEEECTTSCEEEEECBCBC
T ss_pred eCC-CCEEEEEeccC------------------------------C-------CccccCCcCEEECCCCCEEEEecCccc
Confidence 887 543211 0000 0 0012347789999999888777655
Q ss_pred -------------CeEEEEeCCCCceeeecccCCCCEEEEEEc----CCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CC
Q 010794 358 -------------VTAKIWNMKQDKYVHDLREHSKEIYTIRWS----PTGSGTNNPNQQLILASASFDSTVKLWDVE-LG 419 (501)
Q Consensus 358 -------------g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~----p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~ 419 (501)
+.|..|+.. ++... +..+......++|+ |++. .++++...++.|.+|++. .+
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~--------~l~v~~~~~~~i~~~~~~~~g 209 (314)
T 1pjx_A 140 APADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPY--------QLIVAETPTKKLWSYDIKGPA 209 (314)
T ss_dssp TTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEE--------EEEEEETTTTEEEEEEEEETT
T ss_pred ccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCC--------EEEEEECCCCeEEEEECCCCC
Confidence 567777765 44322 22233456788898 8763 245555678899999976 45
Q ss_pred e-----EEEEeeCCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEE-EECC
Q 010794 420 K-----LLYSLNGHR-EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAA-CFAN 491 (501)
Q Consensus 420 ~-----~~~~~~~h~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~-~~~d 491 (501)
+ ....+.++. ..+..++++++|+++++...++.|.+|+..+++.+..+... ..+.+++|+|+|+.|.+ ...+
T Consensus 210 ~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~ 289 (314)
T 1pjx_A 210 KIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHEN 289 (314)
T ss_dssp EEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCC
Confidence 4 233344443 56789999999999998888899999999878776666544 56899999999995554 4556
Q ss_pred CeEEEEEee
Q 010794 492 HTVCVLDFR 500 (501)
Q Consensus 492 ~~v~v~~~~ 500 (501)
+.|.+|++.
T Consensus 290 ~~l~~~~~~ 298 (314)
T 1pjx_A 290 NAVWKFEWQ 298 (314)
T ss_dssp TEEEEEECS
T ss_pred CeEEEEeCC
Confidence 889988763
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=3.8e-13 Score=128.45 Aligned_cols=253 Identities=9% Similarity=-0.023 Sum_probs=175.0
Q ss_pred CCCeEEEEECCCceeE-eec------CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec-
Q 010794 232 YDGQARIWSTNGDLKC-TLS------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW- 303 (501)
Q Consensus 232 ~dg~i~iw~~~~~~~~-~~~------~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 303 (501)
.++.|.++|....... .+. ........+.+. .+..+++...+++|.+||+.+++.+.++.. ......+.+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 3789999998754332 221 122345777774 344555666689999999999998887743 344556666
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCC-----CceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeecccC
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLREH 377 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~ 377 (501)
.+...+++...++.|.++|..+.+....+.... .....+++ .++.++++.. .++.|.+||..+++.+..+...
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 445555565578999999998887766554322 14556777 4555555554 4889999999998877766543
Q ss_pred CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC----------CeEEEEeCCCCeEEEEeeCC-CCCeEEEEECCCCCEEEE
Q 010794 378 SKEIYTIRWSPTGSGTNNPNQQLILASASFD----------STVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLAS 446 (501)
Q Consensus 378 ~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d----------g~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~las 446 (501)
.....++++|+|. +++++..+ +.|.+||..+++....+.-. ....+.++|+|++++|.+
T Consensus 172 -~~p~~i~~~~dG~---------l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 172 -IQPTSLVMDKYNK---------MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp -SCBCCCEECTTSE---------EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred -CCccceEEcCCCC---------EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 2345677777774 44444443 78999999999887766532 236799999999998887
Q ss_pred EeCCCcEEEEeCCCCeeEEE--Eec-CCCEEEEEECC-CCCEEEEE----ECCCeEEEEEe
Q 010794 447 GSLDKSMHIWSLKEGKIVKT--YTG-NGGIFEVCWNK-EGDKIAAC----FANHTVCVLDF 499 (501)
Q Consensus 447 gs~Dg~i~iw~~~~~~~~~~--~~~-~~~i~~~~ws~-~g~~la~~----~~d~~v~v~~~ 499 (501)
+.. .|.+||..++++... +.. ...+..++++| +|...++. ..++.|.+||.
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 654 899999998876421 222 24589999999 55666666 67889999975
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=2.3e-13 Score=130.44 Aligned_cols=291 Identities=12% Similarity=0.077 Sum_probs=190.5
Q ss_pred ECCCCCEEEEEEC-----CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe----
Q 010794 161 WSPAGSLLASGSG-----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS---- 231 (501)
Q Consensus 161 ~sp~~~~l~sgs~-----D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~---- 231 (501)
..|+++.++.... ++.|.+.|..+++.. ..+... ..+ . ++++|||++++.+.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~-------------~~I~vG----~~P-~-va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI-------------GMIDGG----FLP-N-PVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE-------------EEEEEC----SSC-E-EEECTTSSCEEEEEEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE-------------EEEECC----CCC-c-EEECCCCCEEEEEccccc
Confidence 4678887777665 678999998765421 122111 123 3 99999999888775
Q ss_pred ------CCCeEEEEECCCc-eeEeecCC-------CCCEEEEEecCCCCEEEEEec--CCeEEEEeCCCcceeEeeeecc
Q 010794 232 ------YDGQARIWSTNGD-LKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 232 ------~dg~i~iw~~~~~-~~~~~~~h-------~~~V~~l~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
.++.|.+||.... ....+.-. ...-..+.|+|+|++|+.+.. +++|.++|+.+++.+.++....
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 3678999998754 33333211 112356899999999988764 6899999999999888775422
Q ss_pred CCeEEEecCCCceEEEecCCCeEEEEEcCC-CcceeeecCC----CCce-eEEEEc-CCCCEEEEEeCCCeEEEEeCCCC
Q 010794 296 GPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAGH----QGEV-NCVKWD-PTGSLLASCSDDVTAKIWNMKQD 368 (501)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~h----~~~v-~~v~~~-~~~~~l~s~s~Dg~i~iwd~~~~ 368 (501)
. ..+.......|++.+.||.+.+.++.. ++.+.....+ ...+ ....|. ++|++++ .+.+|.|.+.|+.+.
T Consensus 181 ~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 181 C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCC
Confidence 1 122223445677777888888888876 4433211111 1122 224554 6776554 556899999998765
Q ss_pred ce--eeecc--c--------CCCCEEEEEEcCCCCCCCCCCCcEEEEEEe--------CCCeEEEEeCCCCeEEEEeeCC
Q 010794 369 KY--VHDLR--E--------HSKEIYTIRWSPTGSGTNNPNQQLILASAS--------FDSTVKLWDVELGKLLYSLNGH 428 (501)
Q Consensus 369 ~~--~~~~~--~--------~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs--------~dg~i~iwd~~~~~~~~~~~~h 428 (501)
.. +..+. . .......++++|++. .+|++... -.+.|-++|+.+++.+..+.-
T Consensus 258 ~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~-------~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v- 329 (386)
T 3sjl_D 258 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD-------RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM- 329 (386)
T ss_dssp SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT-------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-
T ss_pred cceeecceeccccccccccccCCCcceeeECCCCC-------eEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-
Confidence 42 22221 0 011122345556553 33444331 125799999999999888753
Q ss_pred CCCeEEEEECCCCC-EEEEE-eCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC
Q 010794 429 REPVYSLAFSPTGE-YLASG-SLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE 481 (501)
Q Consensus 429 ~~~v~~l~~spdg~-~lasg-s~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~ 481 (501)
...++.|+|+||++ +|+++ ..++.|.++|..++++++++...+..+.+.+++|
T Consensus 330 g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 330 GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 23678999999996 66665 4589999999999999999988777778888877
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=7.1e-12 Score=117.46 Aligned_cols=275 Identities=11% Similarity=0.026 Sum_probs=187.6
Q ss_pred CccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe
Q 010794 152 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 152 H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
....+.+++++++|+++++...++.|.+|+.. +.. . .. .. ......+..+++.++|.++++..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~---------~--~~-~~----~~~~~~~~~i~~~~~g~l~v~~~ 80 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI---------K--EF-EV----PTPDAKVMCLIVSSLGDIWFTEN 80 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE---------E--EE-EC----SSTTCCEEEEEECTTSCEEEEET
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce---------E--EE-EC----CCCCCcceeEEECCCCCEEEEec
Confidence 44578899999999988887788999999865 321 0 00 01 11235688999999999888877
Q ss_pred CCCeEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEe-eeeccCCeEEEecCC-Cce
Q 010794 232 YDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWRN-NVS 308 (501)
Q Consensus 232 ~dg~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 308 (501)
.++.|..|+..+.... .+......+.++++.+++..+++...++.|..||.. +..... +......+..+.+.. ...
T Consensus 81 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 81 GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 7889999998754432 222234678999999999888887778899999987 554322 111223455665543 345
Q ss_pred EEEecCCCeEEEEEcCCCccee-eecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-ecccCCCCEEEEEE
Q 010794 309 FATSSTDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH-DLREHSKEIYTIRW 386 (501)
Q Consensus 309 ~~~~~~d~~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~~ 386 (501)
+++...++.|+.++. .+.... ....+...+.+++++++|.++++....+.|.+|+. ++.... .+......+..+++
T Consensus 160 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 160 WFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred EEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence 566666788888887 333322 12234456889999999998887777888999998 444332 22334456789999
Q ss_pred cCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE-EEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010794 387 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL-YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 458 (501)
Q Consensus 387 ~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 458 (501)
+++|. +.++...++.|..|+.. ++.. +.+......+.+++++++|.+.++.. . .|..++.
T Consensus 238 d~~g~---------l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 238 GKNSE---------IWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp CSTTC---------EEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCCC---------EEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 98875 45555567899999984 4433 33443445688999999998776655 4 6777764
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=1.9e-12 Score=131.90 Aligned_cols=267 Identities=13% Similarity=0.101 Sum_probs=189.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCC--CcceeEeeeeccCCe
Q 010794 222 GEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK--TEEWKQQFEFHSGPT 298 (501)
Q Consensus 222 ~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~--~~~~~~~~~~~~~~~ 298 (501)
+.+.++++...++.|.++|.... ....+.. ...+..+.|+|+|+++++++.|+.|.+||+. +.+.+..+..... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-A 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-C
Confidence 44567778888999999998754 4445543 3456799999999999999999999999995 7777766654333 3
Q ss_pred EEEecC-----C-CceEEEecCCCeEEEEEcCCCcceeeecC----------CCC-ceeEEEEcCCCCE-EEEEeCCCeE
Q 010794 299 LDVDWR-----N-NVSFATSSTDNMIYVCKIGENRPIKTFAG----------HQG-EVNCVKWDPTGSL-LASCSDDVTA 360 (501)
Q Consensus 299 ~~~~~~-----~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~----------h~~-~v~~v~~~~~~~~-l~s~s~Dg~i 360 (501)
..+.+. + ...+++...++.+.++|..+.++++.+.. |.. .+..+..++++.. +++...+|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 445554 3 34556677789999999988888776542 112 5778888888665 5566677999
Q ss_pred EEEeCCCCcee--eecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-----CCCCeE
Q 010794 361 KIWNMKQDKYV--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-----HREPVY 433 (501)
Q Consensus 361 ~iwd~~~~~~~--~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-----h~~~v~ 433 (501)
.++|....+.+ ..+ ........+.|+|++. ++++++..++.|.++|+.+++.+..+.- |.+.-.
T Consensus 323 ~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr--------~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHR--------YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp EEEETTCSSEEEEEEE-ECCSSEEEEEECTTSC--------EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred EEEecCCCccceeeee-eccccccCceECCCCC--------EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce
Confidence 99998765322 122 2334566788999886 4556666789999999999998776653 322111
Q ss_pred EEEECCCC-CEEEEEe-CCCcEEEEeCCC-------CeeEEEEecCC-CEEEEEECCCCCEEEEEEC-------CCeEEE
Q 010794 434 SLAFSPTG-EYLASGS-LDKSMHIWSLKE-------GKIVKTYTGNG-GIFEVCWNKEGDKIAACFA-------NHTVCV 496 (501)
Q Consensus 434 ~l~~spdg-~~lasgs-~Dg~i~iw~~~~-------~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~-------d~~v~v 496 (501)
.+ ++|++ .+.+++. .++.|.+++..+ .+.++++...+ +-..+..+|+|++|.+... ..+|.|
T Consensus 394 ~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 394 NF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred ee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEE
Confidence 22 68874 4555554 468999999987 67888887643 3356778999999888763 358999
Q ss_pred EEee
Q 010794 497 LDFR 500 (501)
Q Consensus 497 ~~~~ 500 (501)
||+.
T Consensus 473 ~d~~ 476 (567)
T 1qks_A 473 FDIK 476 (567)
T ss_dssp EEGG
T ss_pred EECC
Confidence 9864
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=3.5e-12 Score=123.58 Aligned_cols=275 Identities=9% Similarity=-0.060 Sum_probs=175.5
Q ss_pred ECCCCCEEEEEEC--CC---cEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe----
Q 010794 161 WSPAGSLLASGSG--DS---TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS---- 231 (501)
Q Consensus 161 ~sp~~~~l~sgs~--D~---~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~---- 231 (501)
..|++++++.... .. +|.+||..+++.. ..+.. ...+ .++++|||++++.+.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~-------------~~i~~----g~~p--~i~~spDg~~lyv~n~~~~ 88 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL-------------GHVNG----GFLP--NPVAAHSGSEFALASTSFS 88 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEE-------------EEecC----CCCC--CeEECCCCCEEEEEecccc
Confidence 3467776666543 22 7899998765421 11111 1122 889999999999886
Q ss_pred ------CCCeEEEEECCC-ceeEeecCC-------CCCEEEEEecCCCCEEEEEec--CCeEEEEeCCCcceeEe-eeec
Q 010794 232 ------YDGQARIWSTNG-DLKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQ-FEFH 294 (501)
Q Consensus 232 ------~dg~i~iw~~~~-~~~~~~~~h-------~~~V~~l~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~-~~~~ 294 (501)
.++.|.+||... .....+.-. ...-..+.|+|+|++|+.+.. +.+|.++| .+++.+.. +...
T Consensus 89 ~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred ccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 367899999864 333332211 122357899999999998874 57899999 99988766 5432
Q ss_pred cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeec-----CCCCc-eeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 010794 295 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-----GHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQD 368 (501)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-----~h~~~-v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~ 368 (501)
. .+ .+.......|++.+.|+.+.+++. .++.+.... ....+ .....+.+++..++..+..+.+.+.|+...
T Consensus 168 ~-~~-~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 168 T-CY-HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred c-eE-EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 2 12 222233456777778999999998 665542211 11111 223456666655444457789999998654
Q ss_pred c--eeeecccC----------CCCEEEEEEcCCCCCCCCCCCcEEEEEEe---------CCCeEEEEeCCCCeEEEEeeC
Q 010794 369 K--YVHDLREH----------SKEIYTIRWSPTGSGTNNPNQQLILASAS---------FDSTVKLWDVELGKLLYSLNG 427 (501)
Q Consensus 369 ~--~~~~~~~~----------~~~v~~i~~~p~g~~~~~~~~~~~l~sgs---------~dg~i~iwd~~~~~~~~~~~~ 427 (501)
. .+..+... ......+.++|++. .+.++.. ..+.|.++|+.+++.+.++..
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~--------~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~ 316 (373)
T 2mad_H 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD--------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL 316 (373)
T ss_pred cceEeeeeeecCCcccccceecCceEeEEECCCCC--------EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC
Confidence 2 22222111 11122345566553 2333322 246899999999999888863
Q ss_pred CCCCeEEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEE
Q 010794 428 HREPVYSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTY 467 (501)
Q Consensus 428 h~~~v~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~ 467 (501)
......++|+|||+ +|+++. .++.|.+||+.+++.+.++
T Consensus 317 -g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 317 -GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred -CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 33578999999999 777777 5899999999999998884
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1e-12 Score=124.39 Aligned_cols=246 Identities=9% Similarity=0.074 Sum_probs=161.3
Q ss_pred ccCCccceeEEEECCCCCEEEE-------EECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEEC
Q 010794 149 LEGHTSEVCACAWSPAGSLLAS-------GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 221 (501)
Q Consensus 149 l~~H~~~V~~~~~sp~~~~l~s-------gs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s 221 (501)
+.+......+++|+++|.++++ ++.++.|.+|+..++... .+.. .....+...+.+++++
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-----------~~~~--~~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-----------VICK--PEVNGYGGIPAGCQCD 79 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-----------EEEC--CEETTEECCEEEEEEC
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-----------EEEe--cccCCCCCCCceEEEe
Confidence 3444556789999999998888 678899999997665321 0000 0001123458899999
Q ss_pred CC-CCEEEEEeCCCeEEEEECCCceeEe-ecC----CCCCEEEEEecCCCCEEEEEecC---------------CeEEEE
Q 010794 222 GE-GTLLATGSYDGQARIWSTNGDLKCT-LSK----HKGPIFSLKWNKKGDYLLTGSCD---------------KTAIVW 280 (501)
Q Consensus 222 ~~-~~~l~sg~~dg~i~iw~~~~~~~~~-~~~----h~~~V~~l~~~~~~~~l~s~s~D---------------~~i~iw 280 (501)
++ |+++++.. .+.|.+|+..+..... ... ....+.++++.++|+.+++...+ +.|..|
T Consensus 80 ~~~g~l~v~~~-~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 80 RDANQLFVADM-RLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp SSSSEEEEEET-TTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred cCCCcEEEEEC-CCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEE
Confidence 99 76555544 4578899987443322 211 12347899999999877776654 344444
Q ss_pred eCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEc----CCCCEE-EEEe
Q 010794 281 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD----PTGSLL-ASCS 355 (501)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l-~s~s 355 (501)
|.. ++.. .+..+......++|+ |+++.+ ++..
T Consensus 159 ~~~-g~~~------------------------------------------~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 159 TTD-GQMI------------------------------------------QVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CTT-SCEE------------------------------------------EEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred CCC-CCEE------------------------------------------EeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 432 2111 111112345678899 999654 5556
Q ss_pred CCCeEEEEeCC-CCc-----eeeecccCC-CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC
Q 010794 356 DDVTAKIWNMK-QDK-----YVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH 428 (501)
Q Consensus 356 ~Dg~i~iwd~~-~~~-----~~~~~~~~~-~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h 428 (501)
.++.|.+|+.. .+. ....+..+. .....++++++|. ++++...++.|.+||..+++.+..+..+
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~---------l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 266 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN---------LLVANWGSSHIEVFGPDGGQPKMRIRCP 266 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC---------EEEEEETTTEEEEECTTCBSCSEEEECS
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC---------EEEEEcCCCEEEEEcCCCCcEeEEEeCC
Confidence 78899999976 333 222333333 4577889999885 5666667889999999877776667666
Q ss_pred CCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCC
Q 010794 429 REPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKE 460 (501)
Q Consensus 429 ~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~ 460 (501)
...+.+++|+|+|++| ++...++.|..|++..
T Consensus 267 ~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 267 FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 6789999999999955 4555678899999864
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=1.9e-13 Score=145.34 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=168.0
Q ss_pred CCCCEEEEEeCCCe---EEEEE--CC---CceeEee-------cCCCCCEEEEEecCCCCEEEEEecC-----CeEEEEe
Q 010794 222 GEGTLLATGSYDGQ---ARIWS--TN---GDLKCTL-------SKHKGPIFSLKWNKKGDYLLTGSCD-----KTAIVWD 281 (501)
Q Consensus 222 ~~~~~l~sg~~dg~---i~iw~--~~---~~~~~~~-------~~h~~~V~~l~~~~~~~~l~s~s~D-----~~i~iwd 281 (501)
|+|.+++....++. ..||. .. +.....+ .+|...+.+++|+|+|++|+.++.+ .+|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 67777776654432 44554 32 3222221 2233468899999999998876654 4699999
Q ss_pred CCCcceeEeeeeccCCeEEEecCCCceEEEecCCC--------------eEEEEEcCCCcc--eeeecC--CCCceeEEE
Q 010794 282 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDN--------------MIYVCKIGENRP--IKTFAG--HQGEVNCVK 343 (501)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--------------~i~~~~~~~~~~--~~~~~~--h~~~v~~v~ 343 (501)
+.+++..... .+...+..+.|.++..|+.++.+. .|++|++.++.. ...+.. +...+..+.
T Consensus 196 l~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 196 VADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS 274 (741)
T ss_dssp TTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence 9999875431 111112356676555555554433 388999877652 233333 334588999
Q ss_pred EcCCCCEEEEEeCCC-----eEEEEeCCCC--ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC----CCeEE
Q 010794 344 WDPTGSLLASCSDDV-----TAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF----DSTVK 412 (501)
Q Consensus 344 ~~~~~~~l~s~s~Dg-----~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~----dg~i~ 412 (501)
|+|||++|+..+.++ .|++||+.++ .....+..+...+.... +|+|. .|+..+. ++.|.
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~---------~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGD---------QLWFVSGDGAPLKKIV 344 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETT---------EEEEEECTTCTTCEEE
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCC---------EEEEEECCCCCCCEEE
Confidence 999999988777544 8999998776 31344444444444443 36665 3333333 45699
Q ss_pred EEeCCCC--eEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEec--CCCEEEEEECCCCCEEEE
Q 010794 413 LWDVELG--KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTG--NGGIFEVCWNKEGDKIAA 487 (501)
Q Consensus 413 iwd~~~~--~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~--~~~i~~~~ws~~g~~la~ 487 (501)
+||+.++ .....+..+...+..++|+ ++.++++...|+..+||.+. +|+.+..+.. .+.+..++|+|+|+.|+.
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEE
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEE
Confidence 9999874 3333344455567778887 56778888899987777554 4555555543 456889999999987775
Q ss_pred EEC----CCeEEEEEe
Q 010794 488 CFA----NHTVCVLDF 499 (501)
Q Consensus 488 ~~~----d~~v~v~~~ 499 (501)
... .++|.+||+
T Consensus 424 ~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 424 SFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEETTEEEEEEEEET
T ss_pred EEcCCCCCCEEEEEEC
Confidence 433 367888875
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=9.1e-12 Score=116.65 Aligned_cols=234 Identities=8% Similarity=0.041 Sum_probs=169.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEe-ecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~-~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
..+.++++.++|+++++...++.|.+|+..+..... +..+...+.++++.+++..+++...++.|..||.. +.. ..+
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~ 92 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEY 92 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEE
Confidence 468999999999988877778999999988433321 22345678999999999988887778889999875 221 111
Q ss_pred eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q 010794 292 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 371 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 371 (501)
. +......+.++++.++|.++++...++.|.+||. ++...
T Consensus 93 ------------------------------~---------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 93 ------------------------------T---------LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp ------------------------------E---------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ------------------------------e---------CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 0 0112335778999999998888878889999998 44433
Q ss_pred e-ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCeEEEEECCCCCEEEEEeC
Q 010794 372 H-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 372 ~-~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spdg~~lasgs~ 449 (501)
. .+......+..+++.+++. ++++...++.|..||. +++.... +......+.+++++++|.++++...
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~---------l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNA---------LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSC---------EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred EecCCCCCCCCceEEEcCCCC---------EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC
Confidence 2 2223345678899988875 5555666789999999 6665432 3344556889999999998887777
Q ss_pred CCcEEEEeCCCCeeEEE-Ee-cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 450 DKSMHIWSLKEGKIVKT-YT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 450 Dg~i~iw~~~~~~~~~~-~~-~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
++.|.+|+. +++.... .. ....+.+++++++|+..++...++.|.+||.
T Consensus 203 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 889999999 7765432 12 2346899999999997777767888988874
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.55 E-value=4.8e-11 Score=115.59 Aligned_cols=263 Identities=8% Similarity=-0.020 Sum_probs=170.7
Q ss_pred CCCCCEEEEEeC--CC---eEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEe----------cCCeEEEEeCCC
Q 010794 221 NGEGTLLATGSY--DG---QARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKT 284 (501)
Q Consensus 221 s~~~~~l~sg~~--dg---~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s----------~D~~i~iwd~~~ 284 (501)
.|++++++.... .. .|.++|... .....+.....+ .++++|+|++|+.+. .+++|.+||+.+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 467777666653 22 789999764 344445443444 899999999998876 367899999998
Q ss_pred cceeEeeeec-------cCCeEEEecCCC--ceEEEecC-CCeEEEEEcCCCcceee-ecCCCCceeEEEEcCCC-CEEE
Q 010794 285 EEWKQQFEFH-------SGPTLDVDWRNN--VSFATSST-DNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTG-SLLA 352 (501)
Q Consensus 285 ~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~-d~~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~-~~l~ 352 (501)
.+.+..+... ......+.+.++ ..+++... ++.|.++| .+++.+.. +... .|+.+.|++ +.++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~----~~~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP----TCYHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC----ceEEEEeCCCceEE
Confidence 8877766542 111234445433 33344433 57899999 88877766 4321 134555665 4567
Q ss_pred EEeCCCeEEEEeCCCCceeeecc-----cCCCCE-EEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEE
Q 010794 353 SCSDDVTAKIWNMKQDKYVHDLR-----EHSKEI-YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYS 424 (501)
Q Consensus 353 s~s~Dg~i~iwd~~~~~~~~~~~-----~~~~~v-~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~ 424 (501)
+.+.||.+.+++. +++.+.... ....++ ....+.+++. . +++. +..+.+.+.|+..+. .+..
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------~-~~~~-~~~~~v~vid~~~~~~~v~~~ 251 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-------R-IVWP-VYSGKILQADISAAGATNKAP 251 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCC-------E-EEEE-cCCceEEEEeccCCcceEeee
Confidence 7788999999999 776653221 111111 1223344432 1 2332 357889999987542 2222
Q ss_pred eeC----------CCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-
Q 010794 425 LNG----------HREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD- 483 (501)
Q Consensus 425 ~~~----------h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~- 483 (501)
+.- .......++++|+++.|..+.. .+.|.++|+.+++++.++...+....++|+|||+
T Consensus 252 ~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~ 331 (373)
T 2mad_H 252 IDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGP 331 (373)
T ss_pred eeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCe
Confidence 211 0122445889999987776543 3579999999999999998777789999999999
Q ss_pred EEEEEE-CCCeEEEEEee
Q 010794 484 KIAACF-ANHTVCVLDFR 500 (501)
Q Consensus 484 ~la~~~-~d~~v~v~~~~ 500 (501)
.++++. .++.|.|||+.
T Consensus 332 ~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 332 DLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EEEEEcCCCCeEEEEECC
Confidence 777776 58999999974
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=7.3e-12 Score=117.70 Aligned_cols=228 Identities=14% Similarity=0.196 Sum_probs=154.9
Q ss_pred eEEEEECCC-CCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 215 VTTLDWNGE-GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 215 V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
--+..|+++ +.++++...++.|+.|+..+.....+ .....+.+++++++|+++++ . +..|.+||+.+++.......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEEC
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEec
Confidence 457789985 55666677789999999876544333 34567899999999995544 4 56899999887653221110
Q ss_pred ccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCC---------CeEEEEe
Q 010794 294 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---------VTAKIWN 364 (501)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D---------g~i~iwd 364 (501)
... .....++.++++|+|+++++.... ....||.
T Consensus 92 ------------------------------~~~-------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 92 ------------------------------DND-------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp ------------------------------CTT-------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred ------------------------------CCC-------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 000 012346788999999977655321 2334554
Q ss_pred CCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeC--CCCeE-----EEEeeCCCCCeEEEEE
Q 010794 365 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV--ELGKL-----LYSLNGHREPVYSLAF 437 (501)
Q Consensus 365 ~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~--~~~~~-----~~~~~~h~~~v~~l~~ 437 (501)
+.....+..+.........++|+|++. .++++.+.++.|.+|++ .++.. +..+..+......+++
T Consensus 135 ~d~~g~~~~~~~~~~~pngi~~spdg~--------~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~ 206 (297)
T 3g4e_A 135 LFPDHHVKKYFDQVDISNGLDWSLDHK--------IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI 206 (297)
T ss_dssp ECTTSCEEEEEEEESBEEEEEECTTSC--------EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred EECCCCEEEEeeccccccceEEcCCCC--------EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence 443222222223334567899999885 35566677899999987 45543 2333334456789999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEEC-CCCCEEEEEEC
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWN-KEGDKIAACFA 490 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws-~~g~~la~~~~ 490 (501)
+++|++.++....+.|.+|+..+|+++..+... ..+++++|. |+++.|..++.
T Consensus 207 d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 207 DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 999998888888889999999999988888765 469999998 89887766554
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.53 E-value=1e-12 Score=139.82 Aligned_cols=239 Identities=13% Similarity=0.068 Sum_probs=156.8
Q ss_pred CCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCe-----------
Q 010794 213 KDVTTLDWNGEGTLLATGSYD-----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKT----------- 276 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~d-----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~----------- 276 (501)
..+..++|||||++|+.++.+ ..|++||+.+........+...+..++|+|+ +.|+.++.|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 357889999999999887654 4699999876544332222222357899999 99988877654
Q ss_pred ---EEEEeCCCccee--Eeeeecc--CCeEEEecCCCc-eEEEecC-----CCeEEEEEcCCC--cceeeecCCCCceeE
Q 010794 277 ---AIVWDVKTEEWK--QQFEFHS--GPTLDVDWRNNV-SFATSST-----DNMIYVCKIGEN--RPIKTFAGHQGEVNC 341 (501)
Q Consensus 277 ---i~iwd~~~~~~~--~~~~~~~--~~~~~~~~~~~~-~~~~~~~-----d~~i~~~~~~~~--~~~~~~~~h~~~v~~ 341 (501)
|++|++.++... ..+.... ..+..+.|.++. .++..+. ...|++|++..+ .+...+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 889998776532 2222222 235667776554 3333332 348999998765 314455555544444
Q ss_pred EEEcCCCCEEEEEeCC----CeEEEEeCCCC--ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEe
Q 010794 342 VKWDPTGSLLASCSDD----VTAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWD 415 (501)
Q Consensus 342 v~~~~~~~~l~s~s~D----g~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd 415 (501)
.. +|+|+.|+..+.+ +.|.+||+.++ .....+..+...+..+.|. .+ .++++...|+..+||.
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~---------~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN---------RLFASYIHDAKSQVLA 390 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT---------EEEEEEEETTEEEEEE
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC---------EEEEEEEECCEEEEEE
Confidence 43 4899988877764 45999998774 2333333344456667775 22 3778888899888775
Q ss_pred CC-CCeEEEEeeC-CCCCeEEEEECCCCCEEEE-Ee---CCCcEEEEeCCCCee
Q 010794 416 VE-LGKLLYSLNG-HREPVYSLAFSPTGEYLAS-GS---LDKSMHIWSLKEGKI 463 (501)
Q Consensus 416 ~~-~~~~~~~~~~-h~~~v~~l~~spdg~~las-gs---~Dg~i~iw~~~~~~~ 463 (501)
+. .+.....+.. +...|..++++|+++.|+. .+ ..++|++||+.+++.
T Consensus 391 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 391 FDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 54 4566666654 3567889999999876652 22 347899999988763
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=1.7e-11 Score=120.54 Aligned_cols=234 Identities=11% Similarity=0.051 Sum_probs=159.4
Q ss_pred CCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc-eEEEecCCC--eEEEEEcCCCccee
Q 010794 254 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDN--MIYVCKIGENRPIK 330 (501)
Q Consensus 254 ~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~--~i~~~~~~~~~~~~ 330 (501)
.....|+|+++++.+++...++.|++||+.++...........+. +.|.... .++.+..++ .|++++........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 356899999999877777778999999998877654443322222 4454332 344444433 78888877654433
Q ss_pred ee----cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----cccCCCCE-E-EEEEcCCCCCCCCCCCcE
Q 010794 331 TF----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD----LREHSKEI-Y-TIRWSPTGSGTNNPNQQL 400 (501)
Q Consensus 331 ~~----~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~----~~~~~~~v-~-~i~~~p~g~~~~~~~~~~ 400 (501)
.+ ......+.+++++|++..|+.+..++.|+.||..++..... ........ . .++|+|++. .
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g--------~ 280 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS--------N 280 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT--------E
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC--------E
Confidence 33 22446678999999544454577788999999886653221 11122222 2 889988532 2
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEeeCCC---------------CCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeeE
Q 010794 401 ILASASFDSTVKLWDVELGKLLYSLNGHR---------------EPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGKIV 464 (501)
Q Consensus 401 ~l~sgs~dg~i~iwd~~~~~~~~~~~~h~---------------~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~~~ 464 (501)
++++-..++.|+.|+.... +..+.++. .....|+|+|+|+++++-+ .+++|+.|++.+|.+.
T Consensus 281 lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 5666777889999997643 22332321 3478999999999888888 8999999998888754
Q ss_pred EEEec---------------CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 465 KTYTG---------------NGGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 465 ~~~~~---------------~~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
..... -..+..++++++|+++++-..++.|+.+.+
T Consensus 359 ~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 33221 124789999999999999999999988875
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.50 E-value=1e-11 Score=121.14 Aligned_cols=290 Identities=10% Similarity=0.054 Sum_probs=184.5
Q ss_pred CCCCEEEEEEC-C----CcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe------
Q 010794 163 PAGSLLASGSG-D----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS------ 231 (501)
Q Consensus 163 p~~~~l~sgs~-D----~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~------ 231 (501)
|+++.++.... + +.|.+.|..+.+.. ..+... ..+ .++++|||++++.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv-------------~~I~vG----~~P--gia~SpDgk~lyVan~~~~~~ 142 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL-------------GMTDGG----FLP--HPVAAEDGSFFAQASTVFERI 142 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE-------------EEEEEC----SSC--EEEECTTSSCEEEEEEEEEET
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE-------------EEEECC----CCC--ceEECCCCCEEEEEecccccc
Confidence 35555554443 2 68999998775421 111111 123 799999999888876
Q ss_pred ----CCCeEEEEECCCc-eeEeecCC-------CCCEEEEEecCCCCEEEEEec--CCeEEEEeCCCcceeEeeeeccCC
Q 010794 232 ----YDGQARIWSTNGD-LKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGP 297 (501)
Q Consensus 232 ----~dg~i~iw~~~~~-~~~~~~~h-------~~~V~~l~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~~ 297 (501)
.++.|.++|.... ....+.-- ......+.|+|+|++|+.+.. +++|.+.|+.+++.+..+.....
T Consensus 143 ~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~- 221 (426)
T 3c75_H 143 ARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC- 221 (426)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-
T ss_pred ccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-
Confidence 3678999998653 33333211 122357889999999998874 57899999999998877764221
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCCCccee----eecCCCCc-eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIK----TFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV- 371 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~----~~~~h~~~-v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~- 371 (501)
..+.......|++.+.|+.+.+.+...++... .+.....+ ...+.+.+++..++..+..+.+.+.|+......
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v 300 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATF 300 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEE
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEE
Confidence 12222234566777778888777775444332 12111112 224578899888777788899999998654321
Q ss_pred -eeccc----------CCCCEEEEEEcCCCCCCCCCCCcEEEEEEe--------CCCeEEEEeCCCCeEEEEeeCCCCCe
Q 010794 372 -HDLRE----------HSKEIYTIRWSPTGSGTNNPNQQLILASAS--------FDSTVKLWDVELGKLLYSLNGHREPV 432 (501)
Q Consensus 372 -~~~~~----------~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs--------~dg~i~iwd~~~~~~~~~~~~h~~~v 432 (501)
..+.. .......++++|++. .+|++... ..+.|.++|..+.+.+.++..- ...
T Consensus 301 ~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~-------rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P 372 (426)
T 3c75_H 301 RAPIEALTEAERADDWRPGGWQQTAYHRQSD-------RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEI 372 (426)
T ss_dssp CCCEESSCTTTGGGTEEECSSSCEEEEGGGT-------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEE
T ss_pred eeeeeeccccccccccccCCceeeEEcCCCC-------EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCc
Confidence 11100 011112256777764 22333221 1357999999999999887632 247
Q ss_pred EEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC
Q 010794 433 YSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE 481 (501)
Q Consensus 433 ~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~ 481 (501)
..|+|+|||+ +|+++. .++.|.++|+.++++++++..-+.-..+..+||
T Consensus 373 ~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 373 DSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 8899999999 888887 599999999999999988732222222444554
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=2.3e-11 Score=119.53 Aligned_cols=233 Identities=11% Similarity=0.054 Sum_probs=160.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCC--eEEEEeCCCcceeEe
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQ 290 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~--~i~iwd~~~~~~~~~ 290 (501)
.....|+|+++++++++...++.|++|+..+.....+........ ++|+++++.|+++..++ .|.+|+..++.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 457899999999988888888999999998655444333233334 89999999999888766 789998876544333
Q ss_pred ee---e-ccCCeEEEecCC-CceEEEecCCCeEEEEEcCCCcceee----ecCCCCce--eEEEEcCC-CCEEEEEeCCC
Q 010794 291 FE---F-HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKT----FAGHQGEV--NCVKWDPT-GSLLASCSDDV 358 (501)
Q Consensus 291 ~~---~-~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~----~~~h~~~v--~~v~~~~~-~~~l~s~s~Dg 358 (501)
+. . ....+..+.+.+ +..+..+..++.|+.|+......... ..++...- +.++|+|+ +.++++-...+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 31 1 223344455544 44444466678899999876543222 22222222 39999995 67777778889
Q ss_pred eEEEEeCCCCceeeecccC---------------CCCEEEEEEcCCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCCCeEE
Q 010794 359 TAKIWNMKQDKYVHDLREH---------------SKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVELGKLL 422 (501)
Q Consensus 359 ~i~iwd~~~~~~~~~~~~~---------------~~~v~~i~~~p~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~~~~~ 422 (501)
.|+.|+.... +..+.++ -.....++++|+|. ++++-+ .++.|+.|++.++...
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~---------lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN---------FYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC---------EEEEETTTTCEEEEEETTTTEEE
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC---------EEEEeCCCCCEEEEEECCCCEEE
Confidence 9999987643 2222222 13467899999875 566666 7899999998777643
Q ss_pred EEeeCC---------------CCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010794 423 YSLNGH---------------REPVYSLAFSPTGEYLASGSLDKSMHIWSL 458 (501)
Q Consensus 423 ~~~~~h---------------~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 458 (501)
.+.++ -.....|+++|+|.++++-..+++|+.+++
T Consensus 359 -~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 -TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp -EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred -EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 33333 235789999999988888888889988765
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=6.6e-11 Score=112.72 Aligned_cols=225 Identities=11% Similarity=0.036 Sum_probs=150.4
Q ss_pred eEEEEECCCC-CEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 215 VTTLDWNGEG-TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 215 V~~~~~s~~~-~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
....+|++++ .++++...++.|..|+..+.....+. +...+.++.|+++|+++++. . ..|.+||+.+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~- 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE- 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC-
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee-
Confidence 4567899974 56666667899999998765544443 35678999999999876654 3 448899987765321100
Q ss_pred ccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeC------CCeEEEEeCCC
Q 010794 294 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD------DVTAKIWNMKQ 367 (501)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~------Dg~i~iwd~~~ 367 (501)
.... .....++.++++|+|+++++... .+.|..++ +
T Consensus 127 -----------------------------~~~~-------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~ 168 (326)
T 2ghs_A 127 -----------------------------LESD-------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K 168 (326)
T ss_dssp -----------------------------SSTT-------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T
T ss_pred -----------------------------CCCC-------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C
Confidence 0000 01235778999999998776542 24555555 3
Q ss_pred CceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--CC-e-----EEEEeeCCCCCeEEEEECC
Q 010794 368 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--LG-K-----LLYSLNGHREPVYSLAFSP 439 (501)
Q Consensus 368 ~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--~~-~-----~~~~~~~h~~~v~~l~~sp 439 (501)
++. ..+.........++|+|++. .+.++.+.++.|.+|++. ++ . .+..+......+..+++++
T Consensus 169 g~~-~~~~~~~~~~~~i~~s~dg~--------~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 169 GKV-TKLFADISIPNSICFSPDGT--------TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp TEE-EEEEEEESSEEEEEECTTSC--------EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT
T ss_pred CcE-EEeeCCCcccCCeEEcCCCC--------EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC
Confidence 433 22222334567899999885 244555667899999985 55 2 2333433445578899999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEEC-CCCCEEEEEECC
Q 010794 440 TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWN-KEGDKIAACFAN 491 (501)
Q Consensus 440 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws-~~g~~la~~~~d 491 (501)
+|.+.++...++.|.+|+. +++.+..+.... .+.+++|+ ++++.|.++...
T Consensus 240 ~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 240 EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 9998888777789999998 677777765543 58999998 898877665443
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=1.9e-12 Score=124.62 Aligned_cols=182 Identities=12% Similarity=0.068 Sum_probs=133.6
Q ss_pred CEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC
Q 010794 255 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 334 (501)
Q Consensus 255 ~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 334 (501)
++..|++++....|++|+.++ +++|++....-. +. ... +. ..+.... .
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~--~~--~~~------------------~~--------~~~~~~~-~ 86 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDH--IT--SDS------------------TP--------LTFKWEK-E 86 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHH--HH--SSS------------------CC--------CCCSEEE-E
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhh--hc--ccc------------------cc--------ccceEEe-e
Confidence 678899999999999999874 566987543200 00 000 00 0111111 2
Q ss_pred CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010794 335 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 414 (501)
Q Consensus 335 h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iw 414 (501)
+.. |..++| ++.+|+++ .++.|++||+.+.........+...+..+.+.+. -+++++.||.|.+|
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p-----------~~av~~~dG~L~v~ 151 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN-----------TLVILNSVNDLSAL 151 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS-----------EEEEEETTSEEEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC-----------CEEEEECCCCEEEE
Confidence 445 899999 99999998 8899999999877655556667777888776543 16778999999999
Q ss_pred eCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEE------e----cCCCEEEEEECCCC
Q 010794 415 DVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTY------T----GNGGIFEVCWNKEG 482 (501)
Q Consensus 415 d~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~------~----~~~~i~~~~ws~~g 482 (501)
|+..+.... +...|++++|||+| ++.|..||+|++|+...+.+ .+++ . +...|.+++|.+++
T Consensus 152 dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 152 DLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp ETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred EccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 999877643 34579999999999 78899999999999888775 5556 2 23459999999999
Q ss_pred CEEEEEE
Q 010794 483 DKIAACF 489 (501)
Q Consensus 483 ~~la~~~ 489 (501)
.++++-.
T Consensus 226 ~flv~y~ 232 (388)
T 1xip_A 226 DFLAVFG 232 (388)
T ss_dssp EEEEEEE
T ss_pred eEEEEEc
Confidence 9888643
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=4.6e-11 Score=112.68 Aligned_cols=230 Identities=9% Similarity=0.035 Sum_probs=153.2
Q ss_pred CeEEEEECCCCC-EEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeee
Q 010794 214 DVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 292 (501)
Q Consensus 214 ~V~~~~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 292 (501)
......|+++|+ +++++..++.|..|+..+. ...+..+...+.+++++++|+.+++...++.|.+|+.. +.... +.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~-~~ 122 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL-LV 122 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE-EE
Confidence 356788999998 6677778899999998655 34455566778999999999866666666889999875 43211 10
Q ss_pred eccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC-CCCceeEEEEcCCCCEEEE----EeC-----------
Q 010794 293 FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLAS----CSD----------- 356 (501)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s----~s~----------- 356 (501)
. ...+ ....++.++++|+|++++| |..
T Consensus 123 ~-------------------------------------~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~ 165 (305)
T 3dr2_A 123 G-------------------------------------RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPE 165 (305)
T ss_dssp C-------------------------------------EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCS
T ss_pred e-------------------------------------ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccc
Confidence 0 0000 0124567888999988886 332
Q ss_pred --CCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC------CeEEEEeCCCCeEE--EEe-
Q 010794 357 --DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD------STVKLWDVELGKLL--YSL- 425 (501)
Q Consensus 357 --Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d------g~i~iwd~~~~~~~--~~~- 425 (501)
.+.|..||..+++..... .......++|+|++. .|..+... +.|.+|++..+... ..+
T Consensus 166 ~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~---------~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 166 LAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQ---------TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp SSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSS---------EEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred cCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCC---------EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 246777777666543322 334567899999985 34444433 78999998755411 111
Q ss_pred eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 426 NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 426 ~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
.........++++++|++.++. .+ .|.+|+. +|+.+..+.....+.+++|+|+++.|..++.++ +..++
T Consensus 235 ~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred ECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 1122345678999999965554 44 4999998 577777776655788999999999998888764 44443
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=5.1e-11 Score=114.17 Aligned_cols=267 Identities=9% Similarity=0.027 Sum_probs=174.2
Q ss_pred EECCCCCEEEEEeC-----CCeEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEe----------cCCeEEEEeC
Q 010794 219 DWNGEGTLLATGSY-----DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDV 282 (501)
Q Consensus 219 ~~s~~~~~l~sg~~-----dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s----------~D~~i~iwd~ 282 (501)
...|++..++.... ++.|.+.|... .....+..-..+ . ++++|+|+++++++ .+++|.+||+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34688888888765 67999999865 344455544455 4 99999999888775 3678999999
Q ss_pred CCcceeEeeeecc-------CCeEEEecC--CCceEEEec-CCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEE
Q 010794 283 KTEEWKQQFEFHS-------GPTLDVDWR--NNVSFATSS-TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 352 (501)
Q Consensus 283 ~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 352 (501)
.+.+.+..+.... .....+.+. ....+++.. .++.|.++|+.+.+.+.++.-.. . ...+....+.++
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeE
Confidence 9999888776432 122334443 333445543 37899999999998887764211 1 122322345677
Q ss_pred EEeCCCeEEEEeCCC-CceeeecccC----CCCEE-EEEEc-CCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEE
Q 010794 353 SCSDDVTAKIWNMKQ-DKYVHDLREH----SKEIY-TIRWS-PTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLY 423 (501)
Q Consensus 353 s~s~Dg~i~iwd~~~-~~~~~~~~~~----~~~v~-~i~~~-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~ 423 (501)
+.+.||++.+.++.+ ++.......+ ..++. ...|. ++| ++++ .+.+|.|.+.|+.... .+.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG--------~~~~--vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG--------RLVW--PTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT--------EEEE--EBTTSEEEEEECTTSSCEECC
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC--------cEEE--EeCCCEEEEEECCCCcceeec
Confidence 888899988888875 4432211000 01111 11222 333 2233 4558999999997553 222
Q ss_pred Eee---------C-CCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC
Q 010794 424 SLN---------G-HREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD 483 (501)
Q Consensus 424 ~~~---------~-h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~ 483 (501)
.+. + ....+..++++|+++.|..... .+.|.++|+.++++++.+.....++++++++||+
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~ 343 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEK 343 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSS
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCC
Confidence 221 0 0123345788999988776542 2579999999999999987766788999999997
Q ss_pred -EEEEE-ECCCeEEEEEee
Q 010794 484 -KIAAC-FANHTVCVLDFR 500 (501)
Q Consensus 484 -~la~~-~~d~~v~v~~~~ 500 (501)
+|.++ ..++.|.|+|..
T Consensus 344 ~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 344 PLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp CEEEEEETTTTEEEEEETT
T ss_pred eEEEEEcCCCCeEEEEECC
Confidence 66654 558999999964
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=8.9e-12 Score=119.71 Aligned_cols=256 Identities=8% Similarity=0.031 Sum_probs=166.6
Q ss_pred CCeEEEEECCCCCEEEEEeC--CCeEEEEECCCceeEee-------cCCCCCEEEEEecCCCCEEEEEec-----CCeEE
Q 010794 213 KDVTTLDWNGEGTLLATGSY--DGQARIWSTNGDLKCTL-------SKHKGPIFSLKWNKKGDYLLTGSC-----DKTAI 278 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~--dg~i~iw~~~~~~~~~~-------~~h~~~V~~l~~~~~~~~l~s~s~-----D~~i~ 278 (501)
..+..++++++|+++++... ++.++||.+.......+ ..|-..+.+++++++++.+++-.. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 35789999999999988642 34355555432222222 234567899999999876555443 57899
Q ss_pred EEeCCCcceeEeeeecc------CCeEEEecC--CCceEEEec---CCCeEEEEEcCCCcceeeecCCCCcee-EEEEcC
Q 010794 279 VWDVKTEEWKQQFEFHS------GPTLDVDWR--NNVSFATSS---TDNMIYVCKIGENRPIKTFAGHQGEVN-CVKWDP 346 (501)
Q Consensus 279 iwd~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~---~d~~i~~~~~~~~~~~~~~~~h~~~v~-~v~~~~ 346 (501)
+||+.+++....+.... .....+.+. ....+++.. .++.|++|+...++..+.+.+|..... ...+.+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeE
Confidence 99999998777665432 122444443 345556655 678999999987777666655532211 144556
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC-eEEEEeCC---CCe--
Q 010794 347 TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-TVKLWDVE---LGK-- 420 (501)
Q Consensus 347 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg-~i~iwd~~---~~~-- 420 (501)
+|..+.+.+.++.++.|. ..+..++|+|++. .|..+...+ .|..++.. .+.
T Consensus 177 ~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~---------~ly~~~~~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENE---------WLYLSPMHSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp TTEECBEECTTSCEECCC--------------CCEEEEEECTTSC---------EEEEEESSCSEEEEEEHHHHTCTTCC
T ss_pred CCEEEEeccCCCceecee--------------cccceeEeccCCC---------EEEEEeCCCCeEEEEEHHHhcCCCCC
Confidence 777777788888877663 1356799999885 455555544 44444421 110
Q ss_pred ---EE--EEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec--CCCEEEEEECCCCCEEEEEECC
Q 010794 421 ---LL--YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG--NGGIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 421 ---~~--~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~d 491 (501)
.. ....++......++++++|.++++...++.|.+|+..+|++...... -..+.+++|.++|+.+++....
T Consensus 234 ~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 234 DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred hhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 00 01112334456799999999999999999999999866765433332 2348899999999988877644
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.43 E-value=6.3e-12 Score=132.53 Aligned_cols=247 Identities=12% Similarity=0.156 Sum_probs=152.3
Q ss_pred CCCeEEEEECCCCCEEEEE-----eCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcc
Q 010794 212 SKDVTTLDWNGEGTLLATG-----SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 286 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg-----~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~ 286 (501)
...+..++|||||++|+-+ +....|++||+.+........+.....+++|+ +++.|+.++.+.. ..+.
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~------~~~~ 200 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKP------DGSE 200 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCC------C---
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCc------cccc
Confidence 3457888999999998843 33357999998765432221111112467899 9999988887743 0000
Q ss_pred eeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcc--eeeec--C-CCCceeEEEEcCCCCEEEEEeC----C
Q 010794 287 WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFA--G-HQGEVNCVKWDPTGSLLASCSD----D 357 (501)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~--~-h~~~v~~v~~~~~~~~l~s~s~----D 357 (501)
.........|++|++.+... ...+. . |...+..+.|+|||++|+.... .
T Consensus 201 ----------------------~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 201 ----------------------LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp --------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred ----------------------ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 00001122355555544332 22222 2 3445678999999998754332 3
Q ss_pred CeEEEEeCCCCc-eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC---CeEEEEeCCCCeE--EEEeeCCCCC
Q 010794 358 VTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD---STVKLWDVELGKL--LYSLNGHREP 431 (501)
Q Consensus 358 g~i~iwd~~~~~-~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d---g~i~iwd~~~~~~--~~~~~~h~~~ 431 (501)
..|++||+.++. ....+..+....... |++++. .+++....+ +.|..+++.++.. ...+..|...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~--------~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGS--------TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETT--------EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCC--------EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC
Confidence 589999987653 334444454444444 555553 244444443 6799999987653 2455566666
Q ss_pred eEEEEECCCCCEEEEEeCC-C--cEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEEECC----CeEEEEEe
Q 010794 432 VYSLAFSPTGEYLASGSLD-K--SMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAACFAN----HTVCVLDF 499 (501)
Q Consensus 432 v~~l~~spdg~~lasgs~D-g--~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~~~d----~~v~v~~~ 499 (501)
+. .|++++++|+....+ + .|++|++..+. ...+. ..+.+..++++++++.|+....+ ++|.+||+
T Consensus 330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp CE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 65 899999988876654 3 78999987554 33433 34457788899999988877665 78888875
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=4.9e-12 Score=121.70 Aligned_cols=166 Identities=10% Similarity=0.059 Sum_probs=128.3
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCce-----------eEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeC
Q 010794 214 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDL-----------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 282 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~-----------~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~ 282 (501)
++..+++++...++++|+.++ +++|++..-. ......+.+ |+.|+| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 588999999999999999985 5559753111 112224666 999999 88999998 8899999999
Q ss_pred CCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q 010794 283 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 362 (501)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~i 362 (501)
.+.........+..++.++.+.... ++++..||.+++|++....... +...|+|++|||+| ++.|..||++++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 8776555566666777777765543 8888999999999998776543 44689999999999 678999999999
Q ss_pred EeCCCCce--eeec------c---cCCCCEEEEEEcCCCC
Q 010794 363 WNMKQDKY--VHDL------R---EHSKEIYTIRWSPTGS 391 (501)
Q Consensus 363 wd~~~~~~--~~~~------~---~~~~~v~~i~~~p~g~ 391 (501)
|+...... ..++ . .|...|.+|.|.+++.
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 98876654 3344 2 3678899999998764
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.42 E-value=2.8e-10 Score=106.76 Aligned_cols=227 Identities=12% Similarity=0.111 Sum_probs=147.4
Q ss_pred CCccceeEEEECCC-CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEE
Q 010794 151 GHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 229 (501)
Q Consensus 151 ~H~~~V~~~~~sp~-~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~s 229 (501)
.+..-..+..|+|+ +.++++...++.|..|+..++.. ... . ....+.+++++++|+++++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-----------~~~-~-------~~~~~~~i~~~~dG~l~v~ 70 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-----------QRV-T-------MDAPVSSVALRQSGGYVAT 70 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-----------EEE-E-------CSSCEEEEEEBTTSSEEEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-----------EEE-e-------CCCceEEEEECCCCCEEEE
Confidence 34444568899996 55677777889999999875431 011 0 1346899999999996555
Q ss_pred EeCCCeEEEEECCCceeEeecC-----CCCCEEEEEecCCCCEEEEEecCC---------eEEEEeCCCcceeEeeeecc
Q 010794 230 GSYDGQARIWSTNGDLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSCDK---------TAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 230 g~~dg~i~iw~~~~~~~~~~~~-----h~~~V~~l~~~~~~~~l~s~s~D~---------~i~iwd~~~~~~~~~~~~~~ 295 (501)
. ++.|.+|+........+.. ....+..++++|+|+.+++..... ...+|.+...
T Consensus 71 -~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---------- 138 (297)
T 3g4e_A 71 -I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---------- 138 (297)
T ss_dssp -E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT----------
T ss_pred -E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC----------
Confidence 3 5689999986544333321 123478899999998666543221 1122221110
Q ss_pred CCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeC--CCCce--
Q 010794 296 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNM--KQDKY-- 370 (501)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~--~~~~~-- 370 (501)
+ .+..+..+....+.++|+|+++.| ++.+.++.|.+|++ .++..
T Consensus 139 --------------------g-----------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~ 187 (297)
T 3g4e_A 139 --------------------H-----------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN 187 (297)
T ss_dssp --------------------S-----------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE
T ss_pred --------------------C-----------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC
Confidence 0 011111122345789999999865 56667889999987 34432
Q ss_pred ---eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEEC-CCCCEEEE
Q 010794 371 ---VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS-PTGEYLAS 446 (501)
Q Consensus 371 ---~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pdg~~las 446 (501)
+..+.........+++.++|. +.++....+.|..||..+++.+..+..+...+++++|+ |+++.|..
T Consensus 188 ~~~~~~~~~~~~~p~g~~~d~~G~---------lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 188 RRSVYKLEKEEQIPDGMCIDAEGK---------LWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp EEEEEECCGGGCEEEEEEEBTTSC---------EEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEE
T ss_pred cEEEEECCCCCCCCCeeEECCCCC---------EEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEE
Confidence 222333345667888888875 55666677889999999999998888777789999998 88876654
Q ss_pred Ee
Q 010794 447 GS 448 (501)
Q Consensus 447 gs 448 (501)
++
T Consensus 259 t~ 260 (297)
T 3g4e_A 259 TC 260 (297)
T ss_dssp EE
T ss_pred Ec
Confidence 44
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=6.8e-11 Score=115.33 Aligned_cols=264 Identities=8% Similarity=0.009 Sum_probs=168.5
Q ss_pred CCCCEEEEEeCC-----CeEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEEe----------cCCeEEEEeCCCc
Q 010794 222 GEGTLLATGSYD-----GQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKTE 285 (501)
Q Consensus 222 ~~~~~l~sg~~d-----g~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~s~s----------~D~~i~iwd~~~~ 285 (501)
+++.+++..... +.|.+.|.... ...++..-..+ .+.++|++++|+.+. .++.|.++|+.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 456655555442 68999998653 44455444455 899999999888776 3678999999999
Q ss_pred ceeEeeeec-------cCCeEEEecC--CCceEEEecC-CCeEEEEEcCCCcceeeecCCCCceeEEEEcCCC-CEEEEE
Q 010794 286 EWKQQFEFH-------SGPTLDVDWR--NNVSFATSST-DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASC 354 (501)
Q Consensus 286 ~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~-d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~ 354 (501)
+.+..+... ......+.+. ....+++... ++.|.+.|..+.+.+..+.--. +....|++ ..+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEE
Confidence 988877643 1122233443 3334444433 6889999999988777665211 12334443 556667
Q ss_pred eCCCeEEEEeCCCCceeee----cccCCCCE-EEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE--Eee-
Q 010794 355 SDDVTAKIWNMKQDKYVHD----LREHSKEI-YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY--SLN- 426 (501)
Q Consensus 355 s~Dg~i~iwd~~~~~~~~~----~~~~~~~v-~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~- 426 (501)
+.||.+.+.++.+++.... +.....++ ..+.|.+++. .+++ .+..+.|.+.|........ .+.
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~--------~~~~-~s~~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG--------RLVW-PTYTGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC--------EEEE-EBTTSEEEEEEECSSCEEECCCEES
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC--------EEEE-EeCCCcEEEEeccCCceEEeeeeee
Confidence 7788877777754443311 11111111 1234455543 2333 3467899999986544321 111
Q ss_pred -C-C-------CCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-EEE
Q 010794 427 -G-H-------REPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD-KIA 486 (501)
Q Consensus 427 -~-h-------~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~-~la 486 (501)
. . ......++|+|+++.|.+... .+.|.++|+.+++.+.++........++|+|||+ +++
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLY 386 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEE
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEE
Confidence 0 0 011223789999887665532 3579999999999999987666689999999999 888
Q ss_pred EEE-CCCeEEEEEee
Q 010794 487 ACF-ANHTVCVLDFR 500 (501)
Q Consensus 487 ~~~-~d~~v~v~~~~ 500 (501)
++. .++.|.|+|..
T Consensus 387 v~n~~s~~VsVID~~ 401 (426)
T 3c75_H 387 ALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEcCCCCeEEEEECC
Confidence 777 59999999964
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=1e-10 Score=110.18 Aligned_cols=238 Identities=13% Similarity=0.066 Sum_probs=147.4
Q ss_pred CCCceEEccCCccceeEEEECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE
Q 010794 142 PNSDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 220 (501)
Q Consensus 142 ~~~~~~~l~~H~~~V~~~~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 220 (501)
+...+..+..+.....+.+|+|+|+ +++++..++.|..|+.. +. .. .+. .....+..+++
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~---------~~--~~~-------~~~~~~~gl~~ 93 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT---------VD--VLL-------DATAFTNGNAV 93 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC---------EE--EEE-------ESCSCEEEEEE
T ss_pred CCCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC---------EE--EEe-------CCCCccceeeE
Confidence 3444555666667788999999998 67788788999999863 31 01 111 12345889999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCceeEeecCC----CCCEEEEEecCCCCEEEE----EecC-------------CeEEE
Q 010794 221 NGEGTLLATGSYDGQARIWSTNGDLKCTLSKH----KGPIFSLKWNKKGDYLLT----GSCD-------------KTAIV 279 (501)
Q Consensus 221 s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h----~~~V~~l~~~~~~~~l~s----~s~D-------------~~i~i 279 (501)
+++|+++++...++.|.+|+.++......... ...+..+++.|+|..+++ |..+ +.|..
T Consensus 94 d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 94 DAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEE
Confidence 99999777666678899999875433221111 123567888888887775 3211 22333
Q ss_pred EeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCC--
Q 010794 280 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-- 357 (501)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D-- 357 (501)
||..+++ .... . .....+.++|+|+++.|+.+...
T Consensus 174 ~d~~~g~-----------------------------------------~~~~-~-~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 174 LPPDGSP-----------------------------------------LQRM-A-DLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp ECSSSCC-----------------------------------------CEEE-E-EESSEEEEEECTTSSEEEEEECCC-
T ss_pred EcCCCCc-----------------------------------------EEEE-e-cCCCCcceEEcCCCCEEEEEecCCc
Confidence 3332222 1111 1 22345789999999977666554
Q ss_pred ----CeEEEEeCCCCcee--eec-ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010794 358 ----VTAKIWNMKQDKYV--HDL-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 430 (501)
Q Consensus 358 ----g~i~iwd~~~~~~~--~~~-~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 430 (501)
+.|.+|++..+... ..+ .........+++.++|. +. .+..+ .|.+|+. .++.+..+....
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~---------lw-v~~~~-gv~~~~~-~g~~~~~~~~~~- 277 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW---------LW-SSSGT-GVCVFDS-DGQLLGHIPTPG- 277 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC---------EE-ECCSS-EEEEECT-TSCEEEEEECSS-
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC---------EE-EecCC-cEEEECC-CCCEEEEEECCC-
Confidence 68999998654311 011 01122334566667664 33 33344 4999998 477777766554
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEE
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMH 454 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~ 454 (501)
.+.+++|+|+++.|..++.++..+
T Consensus 278 ~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CCCEEEECTTSCEEEEEETTEEEE
T ss_pred ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 588999999998888877765433
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.39 E-value=5.3e-11 Score=125.41 Aligned_cols=242 Identities=10% Similarity=0.108 Sum_probs=151.2
Q ss_pred cCCccceeEEEECCCCCEEEE-----EECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCC
Q 010794 150 EGHTSEVCACAWSPAGSLLAS-----GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 224 (501)
Q Consensus 150 ~~H~~~V~~~~~sp~~~~l~s-----gs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~ 224 (501)
.+|...+..++|||||++||- |+.+..|++||+.++.... . ..... ....++|+ ||
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~---------~---~~~~~------k~~~~~Ws-Dg 185 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLE---------T---PLKDV------KFSGISWL-GN 185 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEE---------E---EEEEE------ESCCCEEE-TT
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCc---------c---ccCCc------eeccEEEe-CC
Confidence 357778999999999998873 3334689999998875210 0 11000 02457899 99
Q ss_pred CEEEEEeCCC-------------eEEEEECCCce---eEee--cC-CCCCEEEEEecCCCCEEEEEec----CCeEEEEe
Q 010794 225 TLLATGSYDG-------------QARIWSTNGDL---KCTL--SK-HKGPIFSLKWNKKGDYLLTGSC----DKTAIVWD 281 (501)
Q Consensus 225 ~~l~sg~~dg-------------~i~iw~~~~~~---~~~~--~~-h~~~V~~l~~~~~~~~l~s~s~----D~~i~iwd 281 (501)
+.|+.++.+. .|++|++.... ...+ .. |...+.++.|+|+|++|+..+. ...|++||
T Consensus 186 ~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 186 EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred CEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 9999988874 38999876432 2222 23 4455788999999998864432 25899999
Q ss_pred CCCcc-eeEeeeeccCCeEE-EecCCCceEEEecC---CCeEEEEEcCCCcc--eeeecCCCCceeEEEEcCCCCEEEEE
Q 010794 282 VKTEE-WKQQFEFHSGPTLD-VDWRNNVSFATSST---DNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASC 354 (501)
Q Consensus 282 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---d~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~ 354 (501)
+.++. ....+..+...... +.......++.+.. .+.|+.+++..+.. .+.+..|...+. .|+++++.|+..
T Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 266 LSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp TTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred CCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 87763 22333333333322 23334444444443 36789999877654 345666666554 889999887766
Q ss_pred eCCC---eEEEEeCCCCceeeeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC---CCeEEEEeCCCCeE
Q 010794 355 SDDV---TAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASF---DSTVKLWDVELGKL 421 (501)
Q Consensus 355 s~Dg---~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~---dg~i~iwd~~~~~~ 421 (501)
..++ .|++|++..+. ...+.. ....+..+.++|++. .++++.+. -+.|..||+.+++.
T Consensus 344 ~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~--------~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 344 YMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDP--------ALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCS--------CEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCC--------EEEEEecCCCCCCEEEEEECCCCeE
Confidence 5544 68899987543 333332 234455666666554 23333332 27899999987754
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=8.2e-10 Score=105.08 Aligned_cols=219 Identities=10% Similarity=-0.026 Sum_probs=140.3
Q ss_pred ceeEEEECCCC-CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 155 EVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 155 ~V~~~~~sp~~-~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
-..+.+|+|++ .++++...++.|.+|+..++.. ..+. ....+.+++|+++|+++++. .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~--------------~~~~-----~~~~v~~i~~~~dg~l~v~~-~- 108 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK--------------TVHA-----LPFMGSALAKISDSKQLIAS-D- 108 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE--------------EEEE-----CSSCEEEEEEEETTEEEEEE-T-
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE--------------EEEE-----CCCcceEEEEeCCCeEEEEE-C-
Confidence 35678999984 5666777789999999865421 0111 12468999999999887764 3
Q ss_pred CeEEEEECCCceeEeecCC-----CCCEEEEEecCCCCEEEEEecC------CeEEEEeCCCcceeEeeeeccCCeEEEe
Q 010794 234 GQARIWSTNGDLKCTLSKH-----KGPIFSLKWNKKGDYLLTGSCD------KTAIVWDVKTEEWKQQFEFHSGPTLDVD 302 (501)
Q Consensus 234 g~i~iw~~~~~~~~~~~~h-----~~~V~~l~~~~~~~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (501)
..|.+|+..+.....+... ...+..++++|+|+.+++...+ +.|..++ +++..
T Consensus 109 ~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-------------- 172 (326)
T 2ghs_A 109 DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-------------- 172 (326)
T ss_dssp TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE--------------
T ss_pred CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE--------------
Confidence 4589999765433333221 2357899999999866654322 2233333 22110
Q ss_pred cCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCC--CC-ce-----eee
Q 010794 303 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMK--QD-KY-----VHD 373 (501)
Q Consensus 303 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~--~~-~~-----~~~ 373 (501)
.+..+....+.++|+|+++.+ ++.+.++.|.+|++. ++ .. +..
T Consensus 173 ----------------------------~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 173 ----------------------------KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp ----------------------------EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred ----------------------------EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE
Confidence 011111235689999999865 455567899999985 44 21 222
Q ss_pred cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEEC-CCCCEEEEEe
Q 010794 374 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS-PTGEYLASGS 448 (501)
Q Consensus 374 ~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pdg~~lasgs 448 (501)
+.........+++.++|. +.++...++.|..||. +++.+..+..+...+++++|+ |++..|..++
T Consensus 225 ~~~~~~~p~gi~~d~~G~---------lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGH---------IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp CTTSSSEEEEEEECTTSC---------EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCCCCCCeeEECCCCC---------EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 222334567788888774 4555555688999998 577777777666679999998 8887665444
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.35 E-value=6.8e-11 Score=112.52 Aligned_cols=297 Identities=14% Similarity=0.070 Sum_probs=184.8
Q ss_pred EEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q 010794 159 CAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 238 (501)
Q Consensus 159 ~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~i 238 (501)
..+..++. |..|+.++.|..|| .++...... . .....+.++...++|.+++ ++.+ +..
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~-------------~----~~~~~~~~~~~~~~g~l~v-~t~~--l~~ 82 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFF-------------K----SGEIIECRPSIGKDGTIYF-GSDK--VYA 82 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESS-------------C----GGGEEEECCEETTTTEECC-SSCE--EEE
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEE-------------e----cCCCcccceEEecCCcEEE-ecCc--EEE
Confidence 44444554 55566788888898 665421110 0 0112345666666765444 4444 888
Q ss_pred EECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeE
Q 010794 239 WSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMI 318 (501)
Q Consensus 239 w~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 318 (501)
++..+.....+...........+. +..|+.++.++.|..+|.. +.....+......+..+....+..+..++.++.+
T Consensus 83 ~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l 159 (330)
T 3hxj_A 83 INPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYL 159 (330)
T ss_dssp ECCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEE
T ss_pred ECCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEE
Confidence 886554433332222222222222 5578888889999999988 6655444443333333333434556667778899
Q ss_pred EEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCC
Q 010794 319 YVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQ 398 (501)
Q Consensus 319 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~ 398 (501)
+.++.. +..+..+......+.++...+++.+++.+ +.|..|| .+++.+..+......+.++...+++.
T Consensus 160 ~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~------- 227 (330)
T 3hxj_A 160 YAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT------- 227 (330)
T ss_dssp EEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-------
T ss_pred EEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-------
Confidence 999987 66655555555567778887888866544 7899999 66666555544445566666666653
Q ss_pred cEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEE
Q 010794 399 QLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVC 477 (501)
Q Consensus 399 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ 477 (501)
|..++.++.|..+|. ++..+..+......+.++.+.+++. |..++.+|.|..++. +++.+..+... ..+.++.
T Consensus 228 ---l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~ 301 (330)
T 3hxj_A 228 ---IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPV 301 (330)
T ss_dssp ---EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCE
T ss_pred ---EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceE
Confidence 445667888888874 5666666665544455566766664 556778888999996 77776666543 3356677
Q ss_pred ECCCCCEEEEEECCCeEEEEEe
Q 010794 478 WNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 478 ws~~g~~la~~~~d~~v~v~~~ 499 (501)
..++|+ |..++.+|.+++...
T Consensus 302 ~d~~g~-l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 302 IDENGT-IYFGTRNGKFYALFN 322 (330)
T ss_dssp ECTTCC-EEEECTTSCEEEEEC
T ss_pred EcCCCE-EEEEcCCCeEEEEec
Confidence 778876 556888898887754
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.35 E-value=2.2e-09 Score=104.21 Aligned_cols=304 Identities=9% Similarity=0.037 Sum_probs=183.3
Q ss_pred CCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-
Q 010794 164 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN- 242 (501)
Q Consensus 164 ~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~- 242 (501)
.+..|+.++.++.|..||..+++......... ...........+.+. ...++..++.++.++.|..+|..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAE--------KDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----------CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTT
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCcc--------ccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCC
Confidence 36678888889999999988775321110000 000000001112211 11235677888899999999975
Q ss_pred CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe-----EEEecCCCceEEEecCCCe
Q 010794 243 GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-----LDVDWRNNVSFATSSTDNM 317 (501)
Q Consensus 243 ~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~ 317 (501)
+.................. .+..++.++.++.|..+|..+++....+....... ..... .+..++.+..++.
T Consensus 123 G~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~ 199 (376)
T 3q7m_A 123 GTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVVGGDNGR 199 (376)
T ss_dssp CCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEECCTTTE
T ss_pred CCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEEEcCCCE
Confidence 5554444322211111111 24578888999999999999998766554422110 00111 1345666777889
Q ss_pred EEEEEcCCCcceeeecCCCC--c--------e-eEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEE
Q 010794 318 IYVCKIGENRPIKTFAGHQG--E--------V-NCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 386 (501)
Q Consensus 318 i~~~~~~~~~~~~~~~~h~~--~--------v-~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 386 (501)
++.++..+++.+-.+..... . + ..... .+..++.++.++.+..+|..+++.+..... .....+..
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~ 275 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV 275 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE
Confidence 99999888776655432110 0 1 01111 245677788899999999999887655432 22333333
Q ss_pred cCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010794 387 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 465 (501)
Q Consensus 387 ~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 465 (501)
. ++ .|..++.++.|..+|..+++.++..... ...+..... .+..|+.++.+|.|.++|..+|+++.
T Consensus 276 ~-~~----------~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 276 D-GN----------RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp E-TT----------EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred E-CC----------EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEE
Confidence 2 22 4566778999999999999998877622 222222333 25678888999999999999999887
Q ss_pred EEec-CCCEEE-EEECCCCCEEEEEECCCeEEEEE
Q 010794 466 TYTG-NGGIFE-VCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 466 ~~~~-~~~i~~-~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
.+.. ...+.. +.. .+..|..++.+|.|+.|+
T Consensus 343 ~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 343 QQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 7765 222221 111 356888899999999886
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.3e-10 Score=111.59 Aligned_cols=269 Identities=12% Similarity=0.066 Sum_probs=160.0
Q ss_pred cceeEEEECCCCCEEEEEE--CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEe
Q 010794 154 SEVCACAWSPAGSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs--~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
..+..++++|+|+++++.. .++.++||.+.++... ...........+...+..++++++|+++++-.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-----------~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-----------PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-----------ESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-----------cCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 5789999999999988864 2344777776533110 00000001112346799999999998766654
Q ss_pred C-----CCeEEEEECCC-ceeEeecC------CCCCEEEEEecCCCCEE-EEEe---cCCeEEEEeCCCcceeEeeeecc
Q 010794 232 Y-----DGQARIWSTNG-DLKCTLSK------HKGPIFSLKWNKKGDYL-LTGS---CDKTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 232 ~-----dg~i~iw~~~~-~~~~~~~~------h~~~V~~l~~~~~~~~l-~s~s---~D~~i~iwd~~~~~~~~~~~~~~ 295 (501)
. ++.|.+||... .....+.. +...+..+++++++..+ ++.+ .++.|.+||+.+++....+..|.
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 3 57899999864 43444332 22345789999865454 5555 67899999998887655443321
Q ss_pred CCeE-EEec-CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----
Q 010794 296 GPTL-DVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD----- 368 (501)
Q Consensus 296 ~~~~-~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~----- 368 (501)
.... ...+ .....|.....++.+..| ...++.++|+|+|+.|+.+..++. ++|.+...
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~--------------~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRP--------------HLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNL 230 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECC--------------CCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCT
T ss_pred cccccccceeECCEEEEeccCCCceece--------------ecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCC
Confidence 1100 0011 011222223334433222 123678999999998888776663 44443211
Q ss_pred c-----eeeec--ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-CCCCeEEEEECCC
Q 010794 369 K-----YVHDL--REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-HREPVYSLAFSPT 440 (501)
Q Consensus 369 ~-----~~~~~--~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spd 440 (501)
. ....+ .++......++++++|. ++++...++.|.+||..+++....... +...+++++|+++
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~---------l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHN---------IYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCC---------EEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCC---------EEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC
Confidence 0 00001 11222344577777764 667777889999999856764333332 2456899999999
Q ss_pred CCEEEEEeCCCcEEEEe
Q 010794 441 GEYLASGSLDKSMHIWS 457 (501)
Q Consensus 441 g~~lasgs~Dg~i~iw~ 457 (501)
|+++++.+..+.+.+|.
T Consensus 302 g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 302 GYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp SCEEEEECCGGGSGGGB
T ss_pred CcEEEEeCccccccccc
Confidence 99888887666555444
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.33 E-value=3e-14 Score=138.29 Aligned_cols=257 Identities=15% Similarity=0.106 Sum_probs=140.2
Q ss_pred CCCEEEEEeCCCeEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE--
Q 010794 223 EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL-- 299 (501)
Q Consensus 223 ~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~-- 299 (501)
++.++++++.||.|+.||.. ++....+.. +++.+..+..++..+++++.|+.|+.||..+++....+..+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 56789999999999999964 566555554 4555555566777788888999999999988876655543321100
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCC
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 379 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 379 (501)
......+..+++++.++.++.|+..+++.+..+..+. ...++|++..+++++.|+.|+.||..+++.+..+....
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 0011123345566778899999999888776665443 23456788899999999999999999988765543211
Q ss_pred CEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeE-EEEECCCCCEE----EEEeCCCcEE
Q 010794 380 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVY-SLAFSPTGEYL----ASGSLDKSMH 454 (501)
Q Consensus 380 ~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~spdg~~l----asgs~Dg~i~ 454 (501)
.....+.++. .... .++.++.||.|+.||..+|+.++.... ..++. ...++++|... +.+ ++.++
T Consensus 161 -~~~~~~~~~~----~~~~--~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~ 230 (369)
T 2hz6_A 161 -YAASLPEDDV----DYKM--SHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINVA--VETLR 230 (369)
T ss_dssp -ECCBCCCCCT----TCCC--CEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEEE--HHHHH
T ss_pred -ccCccccCCc----cccc--eEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceeec--cccee
Confidence 0111111111 0001 355688899999999999999988874 34544 34566777532 222 44566
Q ss_pred EEeCCCCe----eEEEEecCCCEEEEEECC--CCCEEEEEECCCeEEEEEee
Q 010794 455 IWSLKEGK----IVKTYTGNGGIFEVCWNK--EGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 455 iw~~~~~~----~~~~~~~~~~i~~~~ws~--~g~~la~~~~d~~v~v~~~~ 500 (501)
.++..+|+ .+..+...+.+. +| .+..|.+++.+|.|+.++.+
T Consensus 231 ~ld~~tG~~~~~~~W~~~~~~~~~----sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 231 YLTFMSGEVGRITKWKYPFPKETE----AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHHHTSCCCCCCHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred eeehhcCCcccceeeeeccCcccc----ccccccceEEEecccCCEEecCcc
Confidence 77776666 444443222221 22 23466677777777776653
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.32 E-value=1.9e-10 Score=110.29 Aligned_cols=245 Identities=7% Similarity=-0.065 Sum_probs=157.1
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEECCC-ceeEeecCC-------CCCEEEEEecCCCCEEEEEec--CCe
Q 010794 217 TLDWNGEGTLLATGS----------YDGQARIWSTNG-DLKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKT 276 (501)
Q Consensus 217 ~~~~s~~~~~l~sg~----------~dg~i~iw~~~~-~~~~~~~~h-------~~~V~~l~~~~~~~~l~s~s~--D~~ 276 (501)
.+.++||+++++.+. .++.|.+||+.. ....++... ......+.|+|+|++|+.+.. ...
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 699999999998886 368899999865 444444322 122357899999999998874 467
Q ss_pred EEE--EeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCC-----Cccee----eecCCCCceeEEEEc
Q 010794 277 AIV--WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-----NRPIK----TFAGHQGEVNCVKWD 345 (501)
Q Consensus 277 i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-----~~~~~----~~~~h~~~v~~v~~~ 345 (501)
+.+ +|+.+ +..+... +. ..+.......+++.+.|+.+.+.++.. ++.+. .+.-...+. . +
T Consensus 149 v~V~~iD~~t---v~~i~v~-~~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~ 219 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSA-SC-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-A 219 (368)
T ss_dssp EEEEETTTEE---EEEEECS-SC-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-E
T ss_pred EEEEEEchhh---ceEEECC-Cc-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-c
Confidence 888 99877 3333221 11 112223344566667788887777765 22211 011112232 3 5
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc--eeeecccC----------CCCEEEEEEcCCCCCCCCCCCcEEEEEEe---C---
Q 010794 346 PTGSLLASCSDDVTAKIWNMKQDK--YVHDLREH----------SKEIYTIRWSPTGSGTNNPNQQLILASAS---F--- 407 (501)
Q Consensus 346 ~~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~----------~~~v~~i~~~p~g~~~~~~~~~~~l~sgs---~--- 407 (501)
+++..++..+. +.+.+.|+.+.. .+..+... ......++++|++. .++++.. .
T Consensus 220 ~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~--------~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 220 NYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD--------GIMILTVEHSRSCL 290 (368)
T ss_dssp TTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT--------EEEEEEEECSSCTT
T ss_pred ccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC--------EEEEEeccccCccc
Confidence 66666666666 899999986432 22222110 01111256888875 2333322 2
Q ss_pred --CCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEECC
Q 010794 408 --DSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNK 480 (501)
Q Consensus 408 --dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~ 480 (501)
++.+.++|+.+.+.+..+.... ....|+|+|||+ .+++.. .++.|.++|+.+++++.++........+++++
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred ccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 2356699999999888776433 578999999997 556666 59999999999999999998766667777665
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.30 E-value=8.2e-10 Score=115.49 Aligned_cols=303 Identities=12% Similarity=0.107 Sum_probs=179.4
Q ss_pred CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeec-cccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-
Q 010794 165 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK-GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN- 242 (501)
Q Consensus 165 ~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~- 242 (501)
+..|+.++.++.|.-+|..+|+........... .... ........ .+++ ++..++.++.|+.+..+|..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~---~~a~--~~~~v~v~~~dg~l~alD~~t 147 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDR----STGFKGCCDVVNR---GVAL--WKGKVYVGAWDGRLIALDAAT 147 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCG----GGGGGSSSCSCCC---CCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCc----cccccccccCCCC---CceE--ECCEEEEEcCCCEEEEEECCC
Confidence 556777777888888998877532211100000 0000 00000001 1122 35678888999999999974
Q ss_pred CceeEeecCC-C----CCEEEEEecCCCCEEEEEec------CCeEEEEeCCCcceeEeeeeccCC--------------
Q 010794 243 GDLKCTLSKH-K----GPIFSLKWNKKGDYLLTGSC------DKTAIVWDVKTEEWKQQFEFHSGP-------------- 297 (501)
Q Consensus 243 ~~~~~~~~~h-~----~~V~~l~~~~~~~~l~s~s~------D~~i~iwd~~~~~~~~~~~~~~~~-------------- 297 (501)
++....+..+ . ..+.+--.- .+..++.++. ++.|+.||..+++.+-.+......
T Consensus 148 G~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~ 226 (677)
T 1kb0_A 148 GKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAA 226 (677)
T ss_dssp CCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHH
T ss_pred CCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccc
Confidence 5555555433 1 111110000 2345666554 799999999999877666542211
Q ss_pred --------------------eEEEecCCCceEEEecCC-------------------CeEEEEEcCCCcceeeecC--CC
Q 010794 298 --------------------TLDVDWRNNVSFATSSTD-------------------NMIYVCKIGENRPIKTFAG--HQ 336 (501)
Q Consensus 298 --------------------~~~~~~~~~~~~~~~~~d-------------------~~i~~~~~~~~~~~~~~~~--h~ 336 (501)
...++...+..++ +..+ +.|+.+|..+++.+-.+.. |.
T Consensus 227 ~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d 305 (677)
T 1kb0_A 227 RTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV-GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD 305 (677)
T ss_dssp TTSCGGGCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred ccccccCceeEeCCCcccccceeEcCCCCEEEE-ECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc
Confidence 0122222333333 3322 2588888888887665542 21
Q ss_pred -------CceeEEEEcCCC---CEEEEEeCCCeEEEEeCCCCceeeecccCCCC-----------EE-------------
Q 010794 337 -------GEVNCVKWDPTG---SLLASCSDDVTAKIWNMKQDKYVHDLREHSKE-----------IY------------- 382 (501)
Q Consensus 337 -------~~v~~v~~~~~~---~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~-----------v~------------- 382 (501)
.....+....+| ..++.++.+|.+.++|..+++.+..+...... +.
T Consensus 306 ~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~ 385 (677)
T 1kb0_A 306 NWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDA 385 (677)
T ss_dssp CSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEEC
T ss_pred ccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEE
Confidence 122233444477 68999999999999999999887654322100 10
Q ss_pred -----------EEEEcCCCCCCCCCCCcEEEEEEe------------------------------------------CCC
Q 010794 383 -----------TIRWSPTGSGTNNPNQQLILASAS------------------------------------------FDS 409 (501)
Q Consensus 383 -----------~i~~~p~g~~~~~~~~~~~l~sgs------------------------------------------~dg 409 (501)
.++++|++ .++++... ..|
T Consensus 386 ~P~~~G~~~w~~~a~dp~~--------~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 457 (677)
T 1kb0_A 386 VPGPYGAHNWHPMSFNPQT--------GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFG 457 (677)
T ss_dssp SSCTTCSSCSSCCEEETTT--------TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEE
T ss_pred CcCcccccCCCCceEcCCC--------CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCcc
Confidence 12333332 22322211 127
Q ss_pred eEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EEEEECCCCCEEEE
Q 010794 410 TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FEVCWNKEGDKIAA 487 (501)
Q Consensus 410 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~~~ws~~g~~la~ 487 (501)
.|..||+.+++.++.+. +..++....++..+.+++.++.||.+++||..+|+++..+....++ .-+.|.++|+.+++
T Consensus 458 ~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 458 RLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 89999999999999886 3345555667778888999999999999999999999988654332 34667789974443
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.30 E-value=8.3e-10 Score=115.69 Aligned_cols=304 Identities=11% Similarity=0.112 Sum_probs=177.6
Q ss_pred CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccc-cCC-CCe-EEEEECCCCCEEEEEeCCCeEEEEEC
Q 010794 165 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN-EKS-KDV-TTLDWNGEGTLLATGSYDGQARIWST 241 (501)
Q Consensus 165 ~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~V-~~~~~s~~~~~l~sg~~dg~i~iw~~ 241 (501)
+..|+.++.++.|.-+|..+|+........ ...... ... ..+ ..++. .+..++.++.|+.+..+|.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa 138 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQ---------SDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDA 138 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCC---------CCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCC---------CCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEEC
Confidence 667777888899999998887643211100 000000 000 000 01111 3567888999999999997
Q ss_pred C-CceeEeecC--CCCCEEEEEecC--CCCEEEEEe------cCCeEEEEeCCCcceeEeeeecc-CC------------
Q 010794 242 N-GDLKCTLSK--HKGPIFSLKWNK--KGDYLLTGS------CDKTAIVWDVKTEEWKQQFEFHS-GP------------ 297 (501)
Q Consensus 242 ~-~~~~~~~~~--h~~~V~~l~~~~--~~~~l~s~s------~D~~i~iwd~~~~~~~~~~~~~~-~~------------ 297 (501)
. ++....+.. +......+..+| .+..++.++ .++.|+.||+.+++.+-.+.... .+
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~ 218 (689)
T 1yiq_A 139 KTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIA 218 (689)
T ss_dssp TTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHH
T ss_pred CCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccc
Confidence 5 555444332 111111111122 123455544 37899999999998776654211 00
Q ss_pred --------------------eEEEecCCCceEEEecCCC-------------------eEEEEEcCCCcceeeecC--CC
Q 010794 298 --------------------TLDVDWRNNVSFATSSTDN-------------------MIYVCKIGENRPIKTFAG--HQ 336 (501)
Q Consensus 298 --------------------~~~~~~~~~~~~~~~~~d~-------------------~i~~~~~~~~~~~~~~~~--h~ 336 (501)
...++... ..+..+..++ .|+.+|..+++.+-.+.. |.
T Consensus 219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d 297 (689)
T 1yiq_A 219 AKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGD 297 (689)
T ss_dssp HTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred ccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcc
Confidence 11122222 3344444443 489999999887766643 21
Q ss_pred -------CceeEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceeeecccCC-CCEE-----------------------
Q 010794 337 -------GEVNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHS-KEIY----------------------- 382 (501)
Q Consensus 337 -------~~v~~v~~~~~~~---~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~~v~----------------------- 382 (501)
..+.......+|+ .++.++.+|.++++|..+++.+....... ....
T Consensus 298 ~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~ 377 (689)
T 1yiq_A 298 AWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGK 377 (689)
T ss_dssp CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSS
T ss_pred cccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCC
Confidence 1222223334565 78899999999999999998864322111 0000
Q ss_pred ---------------EEEEcCCCCCCCCCCCcEEEEEEe-----------------------------------------
Q 010794 383 ---------------TIRWSPTGSGTNNPNQQLILASAS----------------------------------------- 406 (501)
Q Consensus 383 ---------------~i~~~p~g~~~~~~~~~~~l~sgs----------------------------------------- 406 (501)
.++++|.. .++++...
T Consensus 378 ~~~~~p~~~Gg~~w~~~a~dp~~--------~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~ 449 (689)
T 1yiq_A 378 RNLVTPAFWGAHDWQPMSYNPDT--------GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEM 449 (689)
T ss_dssp CEEESSCTTCSSCSSCCEEETTT--------TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHH
T ss_pred eeEeCCCcccccCCCcceECCCC--------CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCC
Confidence 02233322 22222111
Q ss_pred ---CCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EEEEECCC
Q 010794 407 ---FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FEVCWNKE 481 (501)
Q Consensus 407 ---~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~~~ws~~ 481 (501)
.+|.|+.||+.+++.++.+..+. ++..-.++..+.+++.|+.||.|+.||.++|+++..+....++ .-+.|..+
T Consensus 450 ~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 450 AKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp HTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEEC
Confidence 14889999999999999887553 3444456667889999999999999999999999888754332 34777889
Q ss_pred CCE-EEEEE
Q 010794 482 GDK-IAACF 489 (501)
Q Consensus 482 g~~-la~~~ 489 (501)
|++ +++.+
T Consensus 529 G~qyv~~~~ 537 (689)
T 1yiq_A 529 GEQYVTFMA 537 (689)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 974 44443
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=5.3e-10 Score=116.92 Aligned_cols=269 Identities=10% Similarity=0.035 Sum_probs=174.1
Q ss_pred CCEEEEEeCCCeEEEEECC-CceeEeecCCCC-----------CEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 224 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKG-----------PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~-----------~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
+..++.++.++.|..+|.. ++.+..+..... ...++.+ .+..++.++.|+.|..+|..+++.+-.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 3456666677788888864 444433322110 0011222 3568889999999999999999887766
Q ss_pred eec-c----CCeE-EEecCCCceEEEec-----CCCeEEEEEcCCCcceeeecCCCC-----------------------
Q 010794 292 EFH-S----GPTL-DVDWRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAGHQG----------------------- 337 (501)
Q Consensus 292 ~~~-~----~~~~-~~~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~h~~----------------------- 337 (501)
... . ..+. ......+..++.++ .++.|+.+|..+++.+-.+.....
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 543 1 0110 00111333344333 268999999988887655432111
Q ss_pred ---------ceeEEEEcCCCCEEEEEeCCC-------------------eEEEEeCCCCceeeeccc--CC-------CC
Q 010794 338 ---------EVNCVKWDPTGSLLASCSDDV-------------------TAKIWNMKQDKYVHDLRE--HS-------KE 380 (501)
Q Consensus 338 ---------~v~~v~~~~~~~~l~s~s~Dg-------------------~i~iwd~~~~~~~~~~~~--~~-------~~ 380 (501)
....++++|++.+|+.++.++ .|..+|..+++.+-.++. |. ..
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 113578899999988887764 489999999987765443 21 11
Q ss_pred EEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----------CCe-----------------
Q 010794 381 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----------EPV----------------- 432 (501)
Q Consensus 381 v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----------~~v----------------- 432 (501)
..-+....+|. ...+|+.++.+|.|+++|..+|+.+..+.-.. .++
T Consensus 315 p~l~~~~~dG~------~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 315 MILADIKIAGK------PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CEEEEEEETTE------EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred cEEEecccCCc------EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 11111112331 01367889999999999999999987765221 111
Q ss_pred -------EEEEECCCCCEEEEEeC-------------------------------------------CCcEEEEeCCCCe
Q 010794 433 -------YSLAFSPTGEYLASGSL-------------------------------------------DKSMHIWSLKEGK 462 (501)
Q Consensus 433 -------~~l~~spdg~~lasgs~-------------------------------------------Dg~i~iw~~~~~~ 462 (501)
..++|+|++.++++... .|.|..||+.+|+
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~ 468 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK 468 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE
T ss_pred cccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc
Confidence 15789999888776542 2789999999999
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 463 IVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 463 ~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
++..+.....++...+..+|..++.++.++.|++||++
T Consensus 469 ~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 469 AAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 99888765555555677788888999999999999964
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.26 E-value=1.4e-09 Score=114.01 Aligned_cols=269 Identities=11% Similarity=0.051 Sum_probs=172.8
Q ss_pred CCEEEEEeCCCeEEEEECC-CceeEeecCCCC----------CE-EEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 224 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKG----------PI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~----------~V-~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
+..++.++.++.|..+|.. ++.+..+..+.. .+ .++.. .+..++.++.|+.|..+|..+++.+-.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 4566777778888888864 555444432211 00 11111 3567889999999999999999877665
Q ss_pred eec-c-CCeEEEe----cCCCceEEEec-----CCCeEEEEEcCCCcceeeecCC-------------------------
Q 010794 292 EFH-S-GPTLDVD----WRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAGH------------------------- 335 (501)
Q Consensus 292 ~~~-~-~~~~~~~----~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~h------------------------- 335 (501)
... . .....+. ..++..++.++ .++.|+.+|..+++.+-.+..-
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 542 1 0000000 11333344332 3689999999888876554310
Q ss_pred ------CCceeEEEEcCCCCEEEEEeCCCe-------------------EEEEeCCCCceeeeccc--CC-------CCE
Q 010794 336 ------QGEVNCVKWDPTGSLLASCSDDVT-------------------AKIWNMKQDKYVHDLRE--HS-------KEI 381 (501)
Q Consensus 336 ------~~~v~~v~~~~~~~~l~s~s~Dg~-------------------i~iwd~~~~~~~~~~~~--~~-------~~v 381 (501)
......++++|++.+|+.++.++. |..||..+++.+-.++. |. .+.
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 011135788999999999988864 99999999988765543 21 111
Q ss_pred EEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-CC-----------------------------
Q 010794 382 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-EP----------------------------- 431 (501)
Q Consensus 382 ~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-~~----------------------------- 431 (501)
.......+|. ...+++.++.+|.++++|..+|+.+....-.. ..
T Consensus 308 ~l~d~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~ 381 (689)
T 1yiq_A 308 ILAELPIDGK------PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLV 381 (689)
T ss_dssp EEEEEEETTE------EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEE
T ss_pred EEEeeccCCc------EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEe
Confidence 1111111221 01257789999999999999999885432111 00
Q ss_pred ---------eEEEEECCCCCEEEEEeC---------------------------------------------CCcEEEEe
Q 010794 432 ---------VYSLAFSPTGEYLASGSL---------------------------------------------DKSMHIWS 457 (501)
Q Consensus 432 ---------v~~l~~spdg~~lasgs~---------------------------------------------Dg~i~iw~ 457 (501)
-..++|+|+..+|++.+. +|.|+.||
T Consensus 382 ~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D 461 (689)
T 1yiq_A 382 TPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWD 461 (689)
T ss_dssp SSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEE
T ss_pred CCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEE
Confidence 112789998887776522 47899999
Q ss_pred CCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 458 LKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 458 ~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+.+|+++..+.....+....+...|..++.|+.|+.|++||.+
T Consensus 462 ~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 462 PVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp TTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECC
Confidence 9999999888765544444667788899999999999999964
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.25 E-value=8.4e-12 Score=121.00 Aligned_cols=203 Identities=13% Similarity=0.102 Sum_probs=120.1
Q ss_pred CCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec-CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCc-ee-
Q 010794 264 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE-VN- 340 (501)
Q Consensus 264 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~-v~- 340 (501)
++..+++++.|+.|+.||..+++....+.. +++.+..+ .++..+++++.|+.|+.|+..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 467899999999999999999998777665 33333222 23446777789999999999877765555433211 11
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe
Q 010794 341 CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK 420 (501)
Q Consensus 341 ~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 420 (501)
+..+. .+..|++|+.|+.|+.||..+++.+..+..+. ...++|.+. .+++++.|+.|+.||.++|+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~---------~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTS---------LLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-----------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCC---------EEEEEecCCEEEEEECCCCC
Confidence 11111 34567788899999999999998876665433 123345332 56778889999999999998
Q ss_pred EEEEeeCCCCCeEEEEECCCC---CEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEE-EEEECCCCCE
Q 010794 421 LLYSLNGHREPVYSLAFSPTG---EYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIF-EVCWNKEGDK 484 (501)
Q Consensus 421 ~~~~~~~h~~~v~~l~~spdg---~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~-~~~ws~~g~~ 484 (501)
.++.+..+. ....+++++. ..+++++.||.|+.||..+|+++..+.....+. ..+++++|..
T Consensus 152 ~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 152 LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 877654221 1223344432 567778999999999999999988877555543 4566777753
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.14 E-value=3.3e-08 Score=95.87 Aligned_cols=259 Identities=8% Similarity=0.030 Sum_probs=161.2
Q ss_pred CCEEEEEeCCCeEEEEECC-CceeEeecCC---------CCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 224 GTLLATGSYDGQARIWSTN-GDLKCTLSKH---------KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h---------~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
+..++.++.++.|..+|.. ++........ ...+.+. ....+..++.++.++.|..+|..+++..-.+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5677788888999999975 5544433321 1222221 122456788899999999999999987655544
Q ss_pred ccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCce-----eEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 010794 294 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV-----NCVKWDPTGSLLASCSDDVTAKIWNMKQD 368 (501)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v-----~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~ 368 (501)
.......... .+..++.++.++.++.++..+++.+-.+....... ...... +..++.++.++.+..+|..++
T Consensus 132 ~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 132 AGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp SSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTC
T ss_pred CCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCC
Confidence 3221111111 13456667778899999998887665554322111 112222 456777888999999999988
Q ss_pred ceeeecccCCCC----EEE---EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCC
Q 010794 369 KYVHDLREHSKE----IYT---IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG 441 (501)
Q Consensus 369 ~~~~~~~~~~~~----v~~---i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg 441 (501)
+.+......... +.. +...|.- ... .+..++.++.|..+|..+++.++.... .....+.. ++
T Consensus 209 ~~~w~~~~~~~~~~~~~~~~~~~~~~p~~------~~~-~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~ 277 (376)
T 3q7m_A 209 QMIWQQRISQATGSTEIDRLSDVDTTPVV------VNG-VVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DG 277 (376)
T ss_dssp CEEEEEECCC-----------CCCCCCEE------ETT-EEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ET
T ss_pred cEEEEEecccCCCCcccccccccCCCcEE------ECC-EEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--EC
Confidence 876554322100 000 0000100 001 355677899999999999999887653 23444544 35
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeEEEEec-CC-CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 442 EYLASGSLDKSMHIWSLKEGKIVKTYTG-NG-GIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 442 ~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~-~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
..|..++.++.|..+|..+|+.+..... .. .+..+.. .+..|.++..+|.|+++|.
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEEC
Confidence 6788888899999999999998877652 11 1222222 3568888888999998885
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.12 E-value=4.8e-09 Score=100.55 Aligned_cols=243 Identities=8% Similarity=-0.062 Sum_probs=147.7
Q ss_pred eEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEEe----------cCCeEEEEeCCCcceeEeeeecc-------C
Q 010794 235 QARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKTEEWKQQFEFHS-------G 296 (501)
Q Consensus 235 ~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s----------~D~~i~iwd~~~~~~~~~~~~~~-------~ 296 (501)
.|.+.|... +...++..-..+ .+.++|++++++.+. .+++|.+||+.+++.+.++.... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 788999765 444555544456 799999999988886 37899999999999988886541 1
Q ss_pred CeEEEec--CCCceEEEecC-CCeEEE--EEcCCCcceeeecCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEeCCC---
Q 010794 297 PTLDVDW--RNNVSFATSST-DNMIYV--CKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQ--- 367 (501)
Q Consensus 297 ~~~~~~~--~~~~~~~~~~~-d~~i~~--~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~i~iwd~~~--- 367 (501)
....+.+ .....+++... ...+.+ +|..+ +..+.-- + |+.+.|++ ..+++.+.||.+.+.++.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-S---CFHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-S---CCCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-C---ceEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 1222333 23334444333 456666 65544 2222210 0 11223444 3455667788888888876
Q ss_pred --Cceeee----cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeC-------CC---
Q 010794 368 --DKYVHD----LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNG-------HR--- 429 (501)
Q Consensus 368 --~~~~~~----~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~-------h~--- 429 (501)
++.+.. +.....+. . .+++. .++..+. +.|.+.|+.... .+..+.- +.
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~~~~---------~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-ANYPG---------MLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ETTTT---------EEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cccCC---------EEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 332211 11111222 2 33332 2233334 889999986532 2222210 00
Q ss_pred CCeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-EEEEEE-CCCeEEEEE
Q 010794 430 EPVYSLAFSPTGEYLASGSL---------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD-KIAACF-ANHTVCVLD 498 (501)
Q Consensus 430 ~~v~~l~~spdg~~lasgs~---------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~-~la~~~-~d~~v~v~~ 498 (501)
.....++|+|+++.|..+.. ++.+.++|+.+++.+.++........++|+|||+ .++++. .++.|.|+|
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 11122689999987775432 2356699999999998887666789999999998 566666 599999999
Q ss_pred ee
Q 010794 499 FR 500 (501)
Q Consensus 499 ~~ 500 (501)
+.
T Consensus 344 ~~ 345 (368)
T 1mda_H 344 AA 345 (368)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=2e-07 Score=85.61 Aligned_cols=246 Identities=11% Similarity=0.008 Sum_probs=149.3
Q ss_pred EEEEEeCCCeEEEEECCCceeE------eecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeeccCCe
Q 010794 226 LLATGSYDGQARIWSTNGDLKC------TLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPT 298 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~~~~~------~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 298 (501)
+|+.+.. +.|+.++.++.... .+......+.+++|++++..|+ +....+.|..+++.+......+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 46777777654321 1211223467899999766655 44557899999987665433222211233
Q ss_pred EEEec--CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeC--CCeEEEEeCCCCceeee
Q 010794 299 LDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSD--DVTAKIWNMKQDKYVHD 373 (501)
Q Consensus 299 ~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~--Dg~i~iwd~~~~~~~~~ 373 (501)
..+.+ .....+++....+.|.+++...................++++|++..| ++... .+.|..+++..... ..
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~ 160 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RI 160 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EE
Confidence 44444 455667777778889998886543222222222457899999965554 44433 46888888764322 22
Q ss_pred c-ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCc
Q 010794 374 L-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKS 452 (501)
Q Consensus 374 ~-~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~ 452 (501)
+ .........++++|++. .+.++-...+.|..+|+........+.+. .....|+.. .+.++++....+.
T Consensus 161 ~~~~~~~~P~gia~d~~~~--------~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 161 LAQDNLGLPNGLTFDAFSS--------QLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp EECTTCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEEEE-TTEEEEEETTTTE
T ss_pred EEECCCCCCcEEEEcCCCC--------EEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEEEe-CCEEEEEECCCCe
Confidence 2 12234567889988754 35556666789999999754433333332 234567664 3444444445689
Q ss_pred EEEEeCCCCeeEEEEecCC--CEEEEEECCCCC
Q 010794 453 MHIWSLKEGKIVKTYTGNG--GIFEVCWNKEGD 483 (501)
Q Consensus 453 i~iw~~~~~~~~~~~~~~~--~i~~~~ws~~g~ 483 (501)
|.+++..+|+.+.++.... ..+.+++.|++.
T Consensus 231 v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 231 VIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999999999888875432 467888888875
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=1.6e-08 Score=95.91 Aligned_cols=218 Identities=14% Similarity=0.069 Sum_probs=142.1
Q ss_pred CCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec
Q 010794 224 GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 303 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (501)
+..+..++.++.+..++..+........+...+.++...+++. |+.++.++.|..+|.. +.....+......+..+..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 4567778889999999987655555544444556666666665 6667788999999998 7665555544444444444
Q ss_pred CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEE
Q 010794 304 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 383 (501)
Q Consensus 304 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~ 383 (501)
..+..+..++ +.++.++ ..+..+..+......+.++...++|.+. .++.++.|..++. ++..+..+......+..
T Consensus 185 d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~ 259 (330)
T 3hxj_A 185 GKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINP-DGTEKWRFKTGKRIESS 259 (330)
T ss_dssp CTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEECT-TSCEEEEEECSSCCCSC
T ss_pred cCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEECC-CCCEeEEeeCCCCcccc
Confidence 3333344444 7788888 5555555555555668888888887655 4666778888874 44444444333222223
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010794 384 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 460 (501)
+...+++ .|..++.+|.|..+|. +++.+..+......+.++...++|.+ ..|+.+|.+++.....
T Consensus 260 ~~~~~~g----------~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 260 PVIGNTD----------TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEECTTS----------CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEEEEC--
T ss_pred ceEcCCC----------eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEEEeccc
Confidence 3333344 2556778889999996 67777776655566778888888875 4578899999887653
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.08 E-value=3.7e-06 Score=90.00 Aligned_cols=310 Identities=9% Similarity=0.064 Sum_probs=194.4
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCe
Q 010794 156 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 235 (501)
Q Consensus 156 V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~ 235 (501)
|.++...+++.+.+ |+.++-|..|+..++... .... ......|.++...+++.+.+ |+.++-
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~--------------~~~~--~~~~~~i~~i~~d~~g~lwi-gt~~~G 236 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFE--------------KVIP--ILGTKQIQAILQQSPTRIWV-ATEGAG 236 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEE--------------ECC------CCCEEEEEEEETTEEEE-EEBSSC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEE--------------EecC--CCCCCeeEEEEEcCCCCEEE-EECCCC
Confidence 88888888887655 555555888887554211 0000 01234688888877776555 444445
Q ss_pred EEEEECCCceeEeecC--------CCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee-------ccCCeEE
Q 010794 236 ARIWSTNGDLKCTLSK--------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-------HSGPTLD 300 (501)
Q Consensus 236 i~iw~~~~~~~~~~~~--------h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-------~~~~~~~ 300 (501)
+.+|+........+.. ....|.++...++|...+ |+.+ -|.+||..++.+...... ....+.+
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 314 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRS 314 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEE
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEE
Confidence 8888876544333321 135699999888887554 4444 588999887765432211 1234666
Q ss_pred EecCCCceEEEecCCCeEEEEEcCCCcceeeecC-------CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q 010794 301 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 373 (501)
Q Consensus 301 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-------h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 373 (501)
+.......+..++.++-|..++...... ..+.. ....|.++...++|.+. .|+.++-|..|+..++....-
T Consensus 315 i~~D~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 315 IFMDSQGGMWLGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp EEECTTSCEEEEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEE
T ss_pred EEEeCCcCEEEEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEE
Confidence 6665556666666666677776544321 22211 23468999998888755 577777799999877654332
Q ss_pred cc--------cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee----CCCCCeEEEEECCCC
Q 010794 374 LR--------EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN----GHREPVYSLAFSPTG 441 (501)
Q Consensus 374 ~~--------~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~spdg 441 (501)
.. .....|.++...+++. +|-.|+.++-|.+||..+++...-.. .....|.++...++|
T Consensus 393 ~~~~~~~~~~l~~~~v~~i~~d~~g~---------~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 393 TLQEDESARGIGSNNIKAVYVDEKKS---------LVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp CCC------CCSCSCEEEEEEETTTT---------EEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred ecCCCCcccCCCCccEEEEEEcCCCC---------EEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence 11 1235688888776663 25567777779999988776543221 124579999999998
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeEEEEec-------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 442 EYLASGSLDKSMHIWSLKEGKIVKTYTG-------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 442 ~~lasgs~Dg~i~iw~~~~~~~~~~~~~-------~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+.+... . -|.+|+..+++....... ...|.++...++|+..++.. +.|.+||..
T Consensus 464 ~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 464 NLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp CEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred CEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 8666543 4 588999888765432211 24589999999998766554 457777753
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.08 E-value=7.8e-08 Score=92.80 Aligned_cols=219 Identities=13% Similarity=0.170 Sum_probs=143.9
Q ss_pred CCCCEEE-EEecCCeEEEEeCCCc----ceeEeee---e----ccCCeEEEecCCCceEEEecCC------CeEEEEEcC
Q 010794 263 KKGDYLL-TGSCDKTAIVWDVKTE----EWKQQFE---F----HSGPTLDVDWRNNVSFATSSTD------NMIYVCKIG 324 (501)
Q Consensus 263 ~~~~~l~-s~s~D~~i~iwd~~~~----~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~d------~~i~~~~~~ 324 (501)
+++++|+ +|-.+.+|.++|+.+. +.+.+++ . .......+...++..++++..+ +.+.++|..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 7777765 4566889999998765 4555542 0 0111223333344455555444 789999999
Q ss_pred CCcceeeecCCC---CceeEEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCceeeecccC--CCC
Q 010794 325 ENRPIKTFAGHQ---GEVNCVKWDPTGSLLASCS-------------------DDVTAKIWNMKQDKYVHDLREH--SKE 380 (501)
Q Consensus 325 ~~~~~~~~~~h~---~~v~~v~~~~~~~~l~s~s-------------------~Dg~i~iwd~~~~~~~~~~~~~--~~~ 380 (501)
+.+.+..+.... ..-..+.|+|+++.+++.. ...+|.+||+.+++.+.++... ...
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 888887775221 2234588899999888884 3689999999988877776542 123
Q ss_pred EEEEEE--cCCCCCCCCCCCcEEEEEEe-----CCCeEEEEeCCCCeEE--EE--eeCC----------------CCCeE
Q 010794 381 IYTIRW--SPTGSGTNNPNQQLILASAS-----FDSTVKLWDVELGKLL--YS--LNGH----------------REPVY 433 (501)
Q Consensus 381 v~~i~~--~p~g~~~~~~~~~~~l~sgs-----~dg~i~iwd~~~~~~~--~~--~~~h----------------~~~v~ 433 (501)
...++| +|++. ...+++- .+++|.+|....+... .. +... .....
T Consensus 253 P~~i~f~~~Pdg~--------~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 253 ALELRPLHDPTKL--------MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp EEEEEECSSTTCC--------EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred cceeEeeECCCCC--------EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 344555 78775 3445555 6778888766554321 11 1110 13467
Q ss_pred EEEECCCCCEEEEEeC-CCcEEEEeCCC---CeeEEEEecCC---------------CEEEEEECCCCCEEEEEE
Q 010794 434 SLAFSPTGEYLASGSL-DKSMHIWSLKE---GKIVKTYTGNG---------------GIFEVCWNKEGDKIAACF 489 (501)
Q Consensus 434 ~l~~spdg~~lasgs~-Dg~i~iw~~~~---~~~~~~~~~~~---------------~i~~~~ws~~g~~la~~~ 489 (501)
.|.+||||++|.++.. .+.|.+|++.+ .+++..+...+ ....++++|||++|.++.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8999999999977664 68999999853 35665554331 357899999999999887
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.06 E-value=7.5e-06 Score=87.58 Aligned_cols=314 Identities=10% Similarity=0.057 Sum_probs=195.3
Q ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeec-cccccCCCCeEEEEECCCCCEEEEEe
Q 010794 153 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK-GRTNEKSKDVTTLDWNGEGTLLATGS 231 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~~~~~l~sg~ 231 (501)
...|.++...++|.+.+ |+.++-|.+|+..++.. ....... ....-....|.++...++|.+.+. +
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t 280 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEI-----------KNYLHSPSNPKSISSNYIRSLAMDSQNRLWIG-T 280 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEE-----------EEECCCTTCTTSCSCSBEEEEEECTTSCEEEE-E
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeE-----------EEeecCCCCccccCCCeEEEEEEcCCCCEEEE-e
Confidence 45688888887777655 44444488888654321 0000000 000112356999999998886654 4
Q ss_pred CCCeEEEEECCCceeEeecC--------CCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee------ccCC
Q 010794 232 YDGQARIWSTNGDLKCTLSK--------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF------HSGP 297 (501)
Q Consensus 232 ~dg~i~iw~~~~~~~~~~~~--------h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~------~~~~ 297 (501)
.+ -|.+|+........+.. ....|.++...++|. |..|+.++-|..|+..+..+...... ....
T Consensus 281 ~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~ 358 (795)
T 4a2l_A 281 FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNV 358 (795)
T ss_dssp SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSS
T ss_pred CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCe
Confidence 44 57888876554433321 235799999988886 55566777789998776554322111 1234
Q ss_pred eEEEecCCCceEEEecCCCeEEEEEcCCCcceeeec-C--------CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 010794 298 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-G--------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 368 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~--------h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~ 368 (501)
+.++....+..+..++.++-|..++....... .+. . ....|.++...+++.+|..|+.++-|.+||..++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFT-SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEE-EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEE-EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 56666555555666776767888876654322 221 1 1356889999888885666777777999998876
Q ss_pred ceeeecc----cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC------CCCCeEEEEEC
Q 010794 369 KYVHDLR----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG------HREPVYSLAFS 438 (501)
Q Consensus 369 ~~~~~~~----~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~s 438 (501)
+...-.. .....|.++...++|. +++ |+.. -|.+||..+++....... ....|.++...
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~--------lwi--gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGN--------LWL--GTLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSC--------EEE--EESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCC--------EEE--EecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEEC
Confidence 5433211 1345688888777664 233 4444 488899887765432211 23579999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeeEEEEe--------cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 439 PTGEYLASGSLDKSMHIWSLKEGKIVKTYT--------GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 439 pdg~~lasgs~Dg~i~iw~~~~~~~~~~~~--------~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
++|.+.+... +-|..|+..+++. .+. ....|.++...++|+..++.. + .|..||.
T Consensus 507 ~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~ 569 (795)
T 4a2l_A 507 SHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNE 569 (795)
T ss_dssp TTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEET
T ss_pred CCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECC
Confidence 9998766554 4588899887765 222 123588999999998665544 3 4777763
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.97 E-value=1e-07 Score=99.46 Aligned_cols=269 Identities=12% Similarity=0.067 Sum_probs=167.3
Q ss_pred CCEEEEEeCCCeEEEEECC-CceeEeecCCCC----------CE-EEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 224 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKG----------PI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~----------~V-~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
+..++.++.++.|..+|.. ++.+..+..... .+ .++.+ .+..++.++.|+.|..+|..+++.+-.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 4456667777888888864 444444322111 00 11122 2467888999999999999999877665
Q ss_pred eeccC----CeE-EEecCCCceEEEecC-----CCeEEEEEcCCCcceeeecCC--------------------------
Q 010794 292 EFHSG----PTL-DVDWRNNVSFATSST-----DNMIYVCKIGENRPIKTFAGH-------------------------- 335 (501)
Q Consensus 292 ~~~~~----~~~-~~~~~~~~~~~~~~~-----d~~i~~~~~~~~~~~~~~~~h-------------------------- 335 (501)
..... .+. ......+..++..+. ++.|+.+|..+++.+-.+...
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 54211 000 000113333333322 588999999888776555311
Q ss_pred -----CCceeEEEEcCCCCEEEEEeCCCe-------------------EEEEeCCCCceeeeccc--CC-------CCEE
Q 010794 336 -----QGEVNCVKWDPTGSLLASCSDDVT-------------------AKIWNMKQDKYVHDLRE--HS-------KEIY 382 (501)
Q Consensus 336 -----~~~v~~v~~~~~~~~l~s~s~Dg~-------------------i~iwd~~~~~~~~~~~~--~~-------~~v~ 382 (501)
......+++.|+..+++.++.++. |..+|..+++.+-.++. |. .+..
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 011124788888888888887764 89999999988765543 21 1111
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC------------CCe------------------
Q 010794 383 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR------------EPV------------------ 432 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~------------~~v------------------ 432 (501)
......+|. ...+++.++.+|.++++|..+|+.+....-.. .++
T Consensus 304 ~~d~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 304 LAELNIDGK------PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp EEEEEETTE------EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred EEEeccCCc------EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 111112321 01257889999999999999999885443211 000
Q ss_pred ------EEEEECCCCCEEEEE------------------------------------eCCCcEEEEeCCCCeeEEEEecC
Q 010794 433 ------YSLAFSPTGEYLASG------------------------------------SLDKSMHIWSLKEGKIVKTYTGN 470 (501)
Q Consensus 433 ------~~l~~spdg~~lasg------------------------------------s~Dg~i~iw~~~~~~~~~~~~~~ 470 (501)
..++|+|+..++... ..+|.|..||+.+|+.+..+...
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~ 457 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP 457 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC
Confidence 126788876655431 13488999999999998877654
Q ss_pred CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 471 GGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 471 ~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.......+...|.++++++.++.|++||.+
T Consensus 458 ~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 458 THWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 444444556678899999999999999864
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=1.9e-07 Score=84.61 Aligned_cols=193 Identities=10% Similarity=0.068 Sum_probs=136.8
Q ss_pred EEEEEecCCCCEEEEEec--CCeEEEEeCCCcceeEeeeeccCC-eEEEecCCCceEEEecCCCeEEEEEcCCCcceeee
Q 010794 256 IFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 332 (501)
Q Consensus 256 V~~l~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 332 (501)
..+|.|++++..+++.+. +++|.++|+.+++....+.....+ ...+.+..+..+++.-.++.+.++|..+.+.+..+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 579999998643344332 589999999999988877643322 23455556777888888999999999988888777
Q ss_pred cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCC-----CCEEEEEEcCCCCCCCCCCCcEEEEEEeC
Q 010794 333 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASASF 407 (501)
Q Consensus 333 ~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~p~g~~~~~~~~~~~l~sgs~ 407 (501)
..-...- ..+++||+.++.+..+++|.++|..+.+.+..+.... .....+.|. ++. +.+....
T Consensus 103 ~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~---------lyvn~~~ 170 (266)
T 2iwa_A 103 THQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE---------VWANIWQ 170 (266)
T ss_dssp ECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEETT
T ss_pred ECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE---------EEEecCC
Confidence 5221222 3345677766666678899999999888776654321 134566776 442 4455556
Q ss_pred CCeEEEEeCCCCeEEEEeeCC-------------CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCC
Q 010794 408 DSTVKLWDVELGKLLYSLNGH-------------REPVYSLAFSPTGE-YLASGSLDKSMHIWSLKE 460 (501)
Q Consensus 408 dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~ 460 (501)
++.|.+.|..+++.+..+.-. ....+.|+|+|+++ +++++...+.|.+.++..
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 889999999999998887531 12458999999986 556666788888887754
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=7.3e-07 Score=93.09 Aligned_cols=307 Identities=12% Similarity=0.152 Sum_probs=174.3
Q ss_pred CCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCe-EEEEECCCCCEEEEEeCCCeEEEEECC-
Q 010794 165 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV-TTLDWNGEGTLLATGSYDGQARIWSTN- 242 (501)
Q Consensus 165 ~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-~~~~~s~~~~~l~sg~~dg~i~iw~~~- 242 (501)
+..|+.++.++.|.-+|..+|+......... ............+ ..++. .+..++.++.|+.+..+|..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~t 136 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEV-------AKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKT 136 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCC-------CGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTT
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCC-------CccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCC
Confidence 5667777788889999988876432111000 0000000000000 01111 24578888899999999975
Q ss_pred CceeEeecCCC-CCEEEEEecC--CCCEEEEEec------CCeEEEEeCCCcceeEeeeeccC-C---------------
Q 010794 243 GDLKCTLSKHK-GPIFSLKWNK--KGDYLLTGSC------DKTAIVWDVKTEEWKQQFEFHSG-P--------------- 297 (501)
Q Consensus 243 ~~~~~~~~~h~-~~V~~l~~~~--~~~~l~s~s~------D~~i~iwd~~~~~~~~~~~~~~~-~--------------- 297 (501)
++....+.... .....+...| .+..++.+.. ++.|..+|+.+++.+-.+..... +
T Consensus 137 G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 137 GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp CCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred CCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccccccccccc
Confidence 55554443211 0000011111 1345555543 58999999999987766653210 0
Q ss_pred -----------------eEEEecCCCceEEEecCCC-------------------eEEEEEcCCCcceeeecC--CC---
Q 010794 298 -----------------TLDVDWRNNVSFATSSTDN-------------------MIYVCKIGENRPIKTFAG--HQ--- 336 (501)
Q Consensus 298 -----------------~~~~~~~~~~~~~~~~~d~-------------------~i~~~~~~~~~~~~~~~~--h~--- 336 (501)
...++...+ .+..+..++ .|+.+|..+++.+-.+.. |.
T Consensus 217 ~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd 295 (668)
T 1kv9_A 217 WQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWD 295 (668)
T ss_dssp CCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred CCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccc
Confidence 011222223 333333333 488888888887665543 22
Q ss_pred ----CceeEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceeeecccCCC------------CEE---------------
Q 010794 337 ----GEVNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHSK------------EIY--------------- 382 (501)
Q Consensus 337 ----~~v~~v~~~~~~~---~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~------------~v~--------------- 382 (501)
.+.....+..+|+ .++.++.+|.+.++|..+++.+........ ++.
T Consensus 296 ~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p 375 (668)
T 1kv9_A 296 FTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWP 375 (668)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESS
T ss_pred ccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECC
Confidence 2233333344665 688999999999999999988743321110 000
Q ss_pred ---------EEEEcCCCCCCCCCCCcEEEE-----------------------------------EEeCCCeEEEEeCCC
Q 010794 383 ---------TIRWSPTGSGTNNPNQQLILA-----------------------------------SASFDSTVKLWDVEL 418 (501)
Q Consensus 383 ---------~i~~~p~g~~~~~~~~~~~l~-----------------------------------sgs~dg~i~iwd~~~ 418 (501)
.++++|+ ..++.+ ....+|.|..||+.+
T Consensus 376 ~~~G~~~w~~~a~dp~--------~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t 447 (668)
T 1kv9_A 376 SPFGAHNWHSMSFNPG--------TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK 447 (668)
T ss_dssp CTTCSSCSSCCEEETT--------TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT
T ss_pred CCccccCCCcceECCC--------CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC
Confidence 0122222 112221 112358899999999
Q ss_pred CeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EEEEECCCCC-EEEEEEC
Q 010794 419 GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FEVCWNKEGD-KIAACFA 490 (501)
Q Consensus 419 ~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~~~ws~~g~-~la~~~~ 490 (501)
++.+++...+ .++....+...+.+++.|+.|+.|++||..+|+++..+.....+ .-+.+..+|+ +++.|..
T Consensus 448 G~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 448 QKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAG 521 (668)
T ss_dssp TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEec
Confidence 9999887643 33333344556788999999999999999999999888654433 2345566776 6666654
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=7.3e-07 Score=80.82 Aligned_cols=190 Identities=12% Similarity=0.089 Sum_probs=130.1
Q ss_pred eEEEecCC-CceEEEecC--CCeEEEEEcCCCcceeeecCCC-CceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q 010794 298 TLDVDWRN-NVSFATSST--DNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 373 (501)
Q Consensus 298 ~~~~~~~~-~~~~~~~~~--d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 373 (501)
...+.+.+ ...+++++. ++.|+++|..+++.+..+.-.. .....+++.. +++.++.-.++.+.++|..+.+.+.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEE
Confidence 34566655 444555543 6799999999998887764222 2233556552 34556666788999999999988877
Q ss_pred cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----CCeEEEEECCCCCEEEEEe
Q 010794 374 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----EPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 374 ~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~spdg~~lasgs 448 (501)
+......-..+ +++|. .++++ ..++.|.++|..+.+.+..+.-.. ..++.+.|. +|...+...
T Consensus 102 i~~g~~~g~gl--t~Dg~--------~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 102 FTHQMKDGWGL--ATDGK--------ILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp EECCSSSCCEE--EECSS--------SEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EECCCCCeEEE--EECCC--------EEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 75331222233 34553 23344 468899999999988877765221 136788888 776666665
Q ss_pred CCCcEEEEeCCCCeeEEEEecC--------------CCEEEEEECCCCCEE-EEEECCCeEEEEEee
Q 010794 449 LDKSMHIWSLKEGKIVKTYTGN--------------GGIFEVCWNKEGDKI-AACFANHTVCVLDFR 500 (501)
Q Consensus 449 ~Dg~i~iw~~~~~~~~~~~~~~--------------~~i~~~~ws~~g~~l-a~~~~d~~v~v~~~~ 500 (501)
.++.|.+.|..+++++..+... ...+.++|+|+++.| +++.....|.+.++.
T Consensus 170 ~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 170 QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 6889999999999998887532 256899999999754 556677889988874
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=1.1e-06 Score=83.20 Aligned_cols=236 Identities=12% Similarity=0.051 Sum_probs=141.4
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecC--------------------CCCCEEEEEecCCCCEEEEEecC
Q 010794 215 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK--------------------HKGPIFSLKWNKKGDYLLTGSCD 274 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~--------------------h~~~V~~l~~~~~~~~l~s~s~D 274 (501)
..+++|.++|++++++..++.|..|+..+.....+.. ....+.++++.+++..|+.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 4567889999878888889999999877643332221 01346889999733456656555
Q ss_pred CeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEE
Q 010794 275 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLAS 353 (501)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s 353 (501)
+.|..+|..++... .+..... +. .....+.+++.+ +|.+.++
T Consensus 101 ~~i~~~d~~~g~~~-~~~~~~~-----------------------------~~-------~~~~p~~i~~d~~~G~l~v~ 143 (322)
T 2fp8_A 101 YHLSVVGSEGGHAT-QLATSVD-----------------------------GV-------PFKWLYAVTVDQRTGIVYFT 143 (322)
T ss_dssp TEEEEECTTCEECE-EEESEET-----------------------------TE-------ECSCEEEEEECTTTCCEEEE
T ss_pred CCEEEEeCCCCEEE-EecccCC-----------------------------CC-------cccccceEEEecCCCEEEEE
Confidence 66888887654321 1110000 00 011244566666 6665554
Q ss_pred Ee-----------------CCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeC
Q 010794 354 CS-----------------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV 416 (501)
Q Consensus 354 ~s-----------------~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~ 416 (501)
-. .++.|..||..++....... .......++|+|++. .++++-+..+.|..|++
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~--------~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 144 DVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSS--------FVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp ESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSS--------EEEEEEGGGTEEEEEES
T ss_pred CCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCC--------EEEEEeCCCCeEEEEEC
Confidence 32 23667778876554322111 112335688888874 24445456789999998
Q ss_pred CCC---eEEEEeeCCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecC-----CCEEEEEE
Q 010794 417 ELG---KLLYSLNGHREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGN-----GGIFEVCW 478 (501)
Q Consensus 417 ~~~---~~~~~~~~h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~-----~~i~~~~w 478 (501)
... ... .+....+ ...|++.++|++.++... .+.|..++. +|+++..+... ..+..+++
T Consensus 215 ~~~~~~~~~-~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 215 EGPKKGTAE-VLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp SSTTTTCEE-EEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE
T ss_pred CCCcCCccc-eEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE
Confidence 742 211 1111223 688999999987777644 467889986 47777766543 23566666
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010794 479 NKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 479 s~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+|+..++...++.|.++++.
T Consensus 292 -~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 292 -HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp -ETTEEEEECSSCSEEEEEEC-
T ss_pred -eCCEEEEeecCCCceEEEecc
Confidence 466666666678899998764
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.88 E-value=1.2e-06 Score=89.48 Aligned_cols=262 Identities=14% Similarity=0.155 Sum_probs=149.2
Q ss_pred CCEEEEEeCCCeEEEEECC-CceeEeec--CCCCCEEEEEecC--CCCEEEEEec------CCeEEEEeCCCcceeEeee
Q 010794 224 GTLLATGSYDGQARIWSTN-GDLKCTLS--KHKGPIFSLKWNK--KGDYLLTGSC------DKTAIVWDVKTEEWKQQFE 292 (501)
Q Consensus 224 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~--~h~~~V~~l~~~~--~~~~l~s~s~------D~~i~iwd~~~~~~~~~~~ 292 (501)
+..++.++.|+.+..+|.. ++...... .+... ..+.-+| .+..++.++. ++.|..+|..+++.+-.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~-~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG-STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT-CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCcc-ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 5577888889999999974 55444332 11100 0011111 1345666655 7999999999998776554
Q ss_pred eccCC----------------------------------------eEEEecCCCceEEEecC-----------C----Ce
Q 010794 293 FHSGP----------------------------------------TLDVDWRNNVSFATSST-----------D----NM 317 (501)
Q Consensus 293 ~~~~~----------------------------------------~~~~~~~~~~~~~~~~~-----------d----~~ 317 (501)
..... ...++...+..++..+. + +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32110 01222222333443321 2 35
Q ss_pred EEEEEcCCCcceeeecC--CC--------CceeEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceeeecccCC------
Q 010794 318 IYVCKIGENRPIKTFAG--HQ--------GEVNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHS------ 378 (501)
Q Consensus 318 i~~~~~~~~~~~~~~~~--h~--------~~v~~v~~~~~~~---~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~------ 378 (501)
|+.++..+++.+-.+.. |. .++ -+...++|+ .++.++.+|.+.++|..+++.+..+....
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 88889888877655542 21 122 123334674 67788999999999999998775543211
Q ss_pred -------CCEE-----------EEEEcCCCC-------CCCCCCCcEEEEEE----------------------------
Q 010794 379 -------KEIY-----------TIRWSPTGS-------GTNNPNQQLILASA---------------------------- 405 (501)
Q Consensus 379 -------~~v~-----------~i~~~p~g~-------~~~~~~~~~~l~sg---------------------------- 405 (501)
.++. ....+|... ...+|...++++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 1111 000111100 00111222222221
Q ss_pred --------eCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EE
Q 010794 406 --------SFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FE 475 (501)
Q Consensus 406 --------s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~ 475 (501)
..+|.|..||+.+++.+.++... .++....+...+..++.++.||.|+.||.++|+++..+.....+ ..
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP 511 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeee
Confidence 14589999999999999887632 22333223334567777999999999999999999888754432 23
Q ss_pred EEECCCCCEEEEE
Q 010794 476 VCWNKEGDKIAAC 488 (501)
Q Consensus 476 ~~ws~~g~~la~~ 488 (501)
+.+..+|+.+++.
T Consensus 512 ~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 512 MTYSFKGKQYIGS 524 (571)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEECCEEEEEE
Confidence 4466788755543
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.86 E-value=6.2e-07 Score=80.28 Aligned_cols=179 Identities=13% Similarity=0.132 Sum_probs=126.6
Q ss_pred EEEEEecCCCCEEEEEecCC--eEEEEeCCCcceeEeeeeccCCe-EEEecCCCceEEEecCCCeEEEEEcCCCcceeee
Q 010794 256 IFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 332 (501)
Q Consensus 256 V~~l~~~~~~~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 332 (501)
..+|.|+ ++..+.+.+.+| +|+++|+.+++....+....... ..+....+..+++.-.++.++++|..+.+.+.++
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 5788998 565556666666 89999999999988876544322 2355566777888888999999999999888887
Q ss_pred cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCC-----CCEEEEEEcCCCCCCCCCCCcEEEEEEeC
Q 010794 333 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASASF 407 (501)
Q Consensus 333 ~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~p~g~~~~~~~~~~~l~sgs~ 407 (501)
.... .-..++ ++++.|+.+..++.|.++|..+.+.+..+.... ..+..+.|. +|. +.+..-.
T Consensus 124 ~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~---------lyan~w~ 190 (262)
T 3nol_A 124 NYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE---------IFANVWQ 190 (262)
T ss_dssp ECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEETT
T ss_pred ECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE---------EEEEEcc
Confidence 6322 223343 567666655557889999999888776654321 223446665 442 4555556
Q ss_pred CCeEEEEeCCCCeEEEEeeCC------------CCCeEEEEECCCCCEEEEEe
Q 010794 408 DSTVKLWDVELGKLLYSLNGH------------REPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 408 dg~i~iwd~~~~~~~~~~~~h------------~~~v~~l~~spdg~~lasgs 448 (501)
++.|.+.|..+++.+..+.-. ....+.|||+|+++.|...|
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 889999999999998877532 12458899999887666555
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.86 E-value=1.1e-06 Score=90.03 Aligned_cols=269 Identities=10% Similarity=0.029 Sum_probs=156.9
Q ss_pred CEEEEEeC-CCeEEEEEC--CCceeEeecCCCC-----------CEEEEEecCCCCE----EEEEecCCeEEEEeCCCcc
Q 010794 225 TLLATGSY-DGQARIWST--NGDLKCTLSKHKG-----------PIFSLKWNKKGDY----LLTGSCDKTAIVWDVKTEE 286 (501)
Q Consensus 225 ~~l~sg~~-dg~i~iw~~--~~~~~~~~~~h~~-----------~V~~l~~~~~~~~----l~s~s~D~~i~iwd~~~~~ 286 (501)
..++.++. ++.|..+|. .++.+..+..... ...++++.|.+.. ++.++.|+.|..+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 34555555 677777776 3444433321110 0122344333334 8888899999999999998
Q ss_pred eeEeeeeccC----CeE-EEecCCCceEEEec-----CCCeEEEEEcCCCcceeeecCCCCc------------------
Q 010794 287 WKQQFEFHSG----PTL-DVDWRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAGHQGE------------------ 338 (501)
Q Consensus 287 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~h~~~------------------ 338 (501)
.+-....... .+. ......+..++.++ .++.|+.+|..+++.+-.+......
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~ 222 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccc
Confidence 7655443210 000 00011333333332 3789999999888766444321100
Q ss_pred -------------------e-eEEEEcCCCCEEEEEeCC----------------CeEEEEeCCCCceeeecccCCC---
Q 010794 339 -------------------V-NCVKWDPTGSLLASCSDD----------------VTAKIWNMKQDKYVHDLREHSK--- 379 (501)
Q Consensus 339 -------------------v-~~v~~~~~~~~l~s~s~D----------------g~i~iwd~~~~~~~~~~~~~~~--- 379 (501)
+ ..+++.+...+|..++.+ +.|..+|.++++.+-.++....
T Consensus 223 ~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~w 302 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW 302 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccc
Confidence 0 134566777777777655 3789999999988755443211
Q ss_pred -------CEEEEEEc-CCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-------------CCe------
Q 010794 380 -------EIYTIRWS-PTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-------------EPV------ 432 (501)
Q Consensus 380 -------~v~~i~~~-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-------------~~v------ 432 (501)
++. +... .+|. ...+++.++.+|.+.++|.++|+.+....-.. .+|
T Consensus 303 d~d~~~~p~l-~d~~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 375 (599)
T 1w6s_A 303 DYAGVNVMML-SEQKDKDGK------ARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYG 375 (599)
T ss_dssp CCCCCCCCEE-EEEECTTSC------EEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGC
T ss_pred cccCCCccEE-EeccccCCc------EEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccC
Confidence 111 1111 2231 01357778899999999999999987754211 111
Q ss_pred --------------------EEEEECCCCCEEEEE---------------------------------e------CCCcE
Q 010794 433 --------------------YSLAFSPTGEYLASG---------------------------------S------LDKSM 453 (501)
Q Consensus 433 --------------------~~l~~spdg~~lasg---------------------------------s------~Dg~i 453 (501)
..++|+|+..++.+. + .+|.|
T Consensus 376 ~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l 455 (599)
T 1w6s_A 376 TRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQI 455 (599)
T ss_dssp CCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEE
T ss_pred CCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeE
Confidence 235677776655432 1 35789
Q ss_pred EEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 454 HIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 454 ~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
..||+.+|+++...........-.....|..+..++.|+.|+.||.+
T Consensus 456 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 456 KAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp EEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred EEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECC
Confidence 99999999998877543222211122356677778889999988854
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.86 E-value=8.9e-07 Score=90.52 Aligned_cols=229 Identities=12% Similarity=0.072 Sum_probs=142.5
Q ss_pred CCEEEEEecCCeEEEEeCCCcceeEeeeeccC----CeE-EEecCCCceEEEecC-----CCeEEEEEcCCCcceeeecC
Q 010794 265 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG----PTL-DVDWRNNVSFATSST-----DNMIYVCKIGENRPIKTFAG 334 (501)
Q Consensus 265 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~-----d~~i~~~~~~~~~~~~~~~~ 334 (501)
+..++.++.|+.+..+|..+++.+-.+..... .+. .....++..++.+.. ++.|+.+|..+++.+-.+..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 56788888999999999999987665543210 010 000113344444432 78999999988876654432
Q ss_pred CCCc--------------------------------------eeEEEEcCCCCEEEEEeCC----------------CeE
Q 010794 335 HQGE--------------------------------------VNCVKWDPTGSLLASCSDD----------------VTA 360 (501)
Q Consensus 335 h~~~--------------------------------------v~~v~~~~~~~~l~s~s~D----------------g~i 360 (501)
.... ...+++.+....+..++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 1100 0235666766666655532 358
Q ss_pred EEEeCCCCceeeecccCC----------CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-
Q 010794 361 KIWNMKQDKYVHDLREHS----------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR- 429 (501)
Q Consensus 361 ~iwd~~~~~~~~~~~~~~----------~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~- 429 (501)
..+|..+++.+-.++... .++. +...++|. ...+++.++.+|.+.++|..+|+.+....-..
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGK------MTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTE------EEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCc------EEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 899999988765544211 1111 11112221 00256778899999999999999987764221
Q ss_pred ------------CCe--------------------------EEEEECCCCCEEEEEe-----------------------
Q 010794 430 ------------EPV--------------------------YSLAFSPTGEYLASGS----------------------- 448 (501)
Q Consensus 430 ------------~~v--------------------------~~l~~spdg~~lasgs----------------------- 448 (501)
.+| ..++|+|+..+|...+
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 2367888877666543
Q ss_pred --------------CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 449 --------------LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 449 --------------~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+|.|..||+.+|+.+..+.....+........+..+.+++.|+.|.+||.+
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred cceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECC
Confidence 3578999999999998887654433333333456677778999999999864
No 248
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.85 E-value=4e-07 Score=87.87 Aligned_cols=183 Identities=15% Similarity=0.196 Sum_probs=125.7
Q ss_pred ceEEEecCCCeEEEEEcCCC----cceeeec------C-CCCceeEEEEcCCCCEEEEEeCC------CeEEEEeCCCCc
Q 010794 307 VSFATSSTDNMIYVCKIGEN----RPIKTFA------G-HQGEVNCVKWDPTGSLLASCSDD------VTAKIWNMKQDK 369 (501)
Q Consensus 307 ~~~~~~~~d~~i~~~~~~~~----~~~~~~~------~-h~~~v~~v~~~~~~~~l~s~s~D------g~i~iwd~~~~~ 369 (501)
..++.+..++.|+++|+.+. +.++++. . .......+.+.|+| +++++..+ |.|.++|..+.+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 45667778899999998644 3444442 0 11134567888999 77776665 789999999999
Q ss_pred eeeecccCC---CCEEEEEEcCCCCCCCCCCCcEEEEEEe-------------------CCCeEEEEeCCCCeEEEEeeC
Q 010794 370 YVHDLREHS---KEIYTIRWSPTGSGTNNPNQQLILASAS-------------------FDSTVKLWDVELGKLLYSLNG 427 (501)
Q Consensus 370 ~~~~~~~~~---~~v~~i~~~p~g~~~~~~~~~~~l~sgs-------------------~dg~i~iwd~~~~~~~~~~~~ 427 (501)
.+..+.... .--+.+.|+|++. ++++.. ....|.+||+.+++.+.++.-
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~---------~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNE---------VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTT---------EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEEEccCCCCccccceEEECCCCC---------EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 888775322 2245678888875 455553 378999999999988887764
Q ss_pred C-C-CCeEEEEE--CCCCCEEEEEe------CCCcEEEEeCCCCee--EEEE--ec-----------------CCCEEEE
Q 010794 428 H-R-EPVYSLAF--SPTGEYLASGS------LDKSMHIWSLKEGKI--VKTY--TG-----------------NGGIFEV 476 (501)
Q Consensus 428 h-~-~~v~~l~~--spdg~~lasgs------~Dg~i~iw~~~~~~~--~~~~--~~-----------------~~~i~~~ 476 (501)
- . .....|.| +|+|+++..++ .+++|.+|....|+. .+.+ .. ...+..+
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 2 1 23345656 99999887666 567888877665532 1211 11 1346789
Q ss_pred EECCCCCEEEEE-ECCCeEEEEEe
Q 010794 477 CWNKEGDKIAAC-FANHTVCVLDF 499 (501)
Q Consensus 477 ~ws~~g~~la~~-~~d~~v~v~~~ 499 (501)
.+||||++|.++ ...+.|.|||+
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEe
Confidence 999999988765 45789999997
No 249
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=6.3e-05 Score=80.24 Aligned_cols=314 Identities=11% Similarity=0.035 Sum_probs=186.3
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeecc-ccccCCCCeEEEEECCCCCEEEEEeC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-RTNEKSKDVTTLDWNGEGTLLATGSY 232 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~s~~~~~l~sg~~ 232 (501)
..|.++...++|.+.+. +.. -|.+|+..++.... ...... ........|.++...++|.+.+ |+.
T Consensus 211 ~~i~~i~~d~~g~lwig-t~~-Gl~~~d~~~~~~~~-----------~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~ 276 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIG-TSK-GLALFNANTETFTN-----------FHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATE 276 (781)
T ss_dssp SSEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEEC----------------------CCCCEEEEEECTTSEEEE-EES
T ss_pred CceeEEEEcCCCCEEEE-eCC-cHheECCCCCcEEE-----------EEcCCCccccccCceEEEEEECCCCCEEE-EeC
Confidence 46889998888886654 344 58888875442110 000000 0011245699999888887554 555
Q ss_pred CCeEEEEECCCceeEeec---------------CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeee-----
Q 010794 233 DGQARIWSTNGDLKCTLS---------------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE----- 292 (501)
Q Consensus 233 dg~i~iw~~~~~~~~~~~---------------~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~----- 292 (501)
.+-|.+++........+. -....|.++...++|. |-.|+.++-|..|+..+........
T Consensus 277 ~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~ 355 (781)
T 3v9f_A 277 LNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQM 355 (781)
T ss_dssp SSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CC
T ss_pred CCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcccc
Confidence 456778887643322111 1345789998888876 5556667778899887655432211
Q ss_pred ----eccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeee----cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEe
Q 010794 293 ----FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 364 (501)
Q Consensus 293 ----~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~----~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd 364 (501)
.....+.++....+..+..++.++-|..++...... ..+ ......|.++...++|.+.+ |+.++-+..++
T Consensus 356 ~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~ 433 (781)
T 3v9f_A 356 NESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYN 433 (781)
T ss_dssp CSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEEC
T ss_pred ccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEc
Confidence 112345566555545555555555677777654321 111 12235688998888887655 66667788898
Q ss_pred CCCCceeeecc--cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-----CCCeEEEEE
Q 010794 365 MKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-----REPVYSLAF 437 (501)
Q Consensus 365 ~~~~~~~~~~~--~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~l~~ 437 (501)
..+++...-.. .....|.++...+++. |-.|+. +-|..||..+++........ ...|.++..
T Consensus 434 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~----------lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 434 TRLKKFQIIELEKNELLDVRVFYEDKNKK----------IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp SSSCEEEECCSTTTCCCCEEEEEECTTSE----------EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred CCCCcEEEeccCCCCCCeEEEEEECCCCC----------EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 87665432211 1345788888777663 333444 55888998776543322211 357999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-----CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-----NGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-----~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
.++|.+.+.....| |..|+..+++... +.. ...|.++...++|+..++.. +|-|..||
T Consensus 503 d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 503 DSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp CTTCCEEEEESSSC-EEEECTTCCEEEE-ECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred cCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 99998666443344 7789887765433 321 23588999999998665544 55436665
No 250
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=3.7e-05 Score=81.99 Aligned_cols=322 Identities=11% Similarity=0.023 Sum_probs=186.8
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
..|.++...++|.+.+ |+..+-|.+++..+........ .. ...+.............|.++....+|.+ -.|+.+
T Consensus 258 ~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~-~~--f~~~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~~ 332 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQ-IR--FEFIREGDNNYSLSNASARYIFQDSFNNI-WIGTWG 332 (781)
T ss_dssp CCEEEEEECTTSEEEE-EESSSCEEEEETTCC------------CEEECBCSSTTSBSSSCEEEEEECSSCCE-EEEEBS
T ss_pred ceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeec-cc--cccccCCCCCCCCCCCeEEEEEEeCCCCE-EEEecC
Confidence 4688998888877554 5554567888876543210000 00 00000000011123456999999988874 456667
Q ss_pred CeEEEEECCCceeEeec----------CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee---eeccCCeEE
Q 010794 234 GQARIWSTNGDLKCTLS----------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF---EFHSGPTLD 300 (501)
Q Consensus 234 g~i~iw~~~~~~~~~~~----------~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~---~~~~~~~~~ 300 (501)
+-|..++........+. .....|.++...++|. |..|+.++-|..||..++...... ......+.+
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLC 411 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEE
Confidence 77888886644332221 1235689998888776 455665666889998765433211 112234556
Q ss_pred EecCCCceEEEecCCCeEEEEEcCCCcceeeec---CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccC
Q 010794 301 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA---GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 377 (501)
Q Consensus 301 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 377 (501)
+.......+..+..++.++.++..+++. ..+. .....|.++...+++.+.+ |+. +-|.+|+..+++........
T Consensus 412 i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 412 SLKDSEGNLWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEECTTSCEEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT
T ss_pred EEECCCCCEEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc
Confidence 6554444455555556677777655432 2222 1345788998888887655 444 45888998776543321111
Q ss_pred -----CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC---CCCCeEEEEECCCCCEEEEEeC
Q 010794 378 -----SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG---HREPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 378 -----~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spdg~~lasgs~ 449 (501)
...|.++...++|. |-.|+..+-|..||..+++...-... ....|.+|...++|.+.++..
T Consensus 489 ~~~~~~~~i~~i~~d~~g~----------lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGR----------FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp TSSCSCSCEEEEEECTTCC----------EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred ccccccceeEEEEEcCCCC----------EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 35688888877774 33345434477788876654332111 134689999999998666544
Q ss_pred CCcEEEEeCCCCeeEEEEec-----CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 450 DKSMHIWSLKEGKIVKTYTG-----NGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 450 Dg~i~iw~~~~~~~~~~~~~-----~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
.|.|..|+..+++.. .+.. ...|.++...++|++.+++ .+| |..|+
T Consensus 558 ~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~ 608 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYI 608 (781)
T ss_dssp TEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEE
T ss_pred CCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEE
Confidence 676588998877643 2321 2247788888888765554 444 55554
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.83 E-value=2.8e-06 Score=86.94 Aligned_cols=258 Identities=13% Similarity=0.145 Sum_probs=145.0
Q ss_pred EEEEeCCCeEEEEECC-CceeEeecCCC----CCEEE-EEecCCCCEEEEEe------cCCeEEEEeCCCcceeEeeeec
Q 010794 227 LATGSYDGQARIWSTN-GDLKCTLSKHK----GPIFS-LKWNKKGDYLLTGS------CDKTAIVWDVKTEEWKQQFEFH 294 (501)
Q Consensus 227 l~sg~~dg~i~iw~~~-~~~~~~~~~h~----~~V~~-l~~~~~~~~l~s~s------~D~~i~iwd~~~~~~~~~~~~~ 294 (501)
++.++.|+.+..+|.. ++......... ..+++ ... .+ ..++.++ .++.|+.+|..+++.+-.+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-EC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7788889999999964 44443332111 01111 001 13 3556555 3899999999999877655432
Q ss_pred cCC----------------------------------------eEEEecCCCceEEEecC---------------CCeEE
Q 010794 295 SGP----------------------------------------TLDVDWRNNVSFATSST---------------DNMIY 319 (501)
Q Consensus 295 ~~~----------------------------------------~~~~~~~~~~~~~~~~~---------------d~~i~ 319 (501)
... ...++...+..++..+. .+.|+
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 111 01222223333443332 14788
Q ss_pred EEEcCCCcceeeecC--CC--------CceeEEEEc-CCC---CEEEEEeCCCeEEEEeCCCCceeeecccCC-------
Q 010794 320 VCKIGENRPIKTFAG--HQ--------GEVNCVKWD-PTG---SLLASCSDDVTAKIWNMKQDKYVHDLREHS------- 378 (501)
Q Consensus 320 ~~~~~~~~~~~~~~~--h~--------~~v~~v~~~-~~~---~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~------- 378 (501)
.++..+++.+-.+.. |. .++ -+... .+| +.++.++.+|.+.++|..+++.+.......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 889888887655543 21 112 12332 567 567889999999999999998775443211
Q ss_pred ------CCEE--------------------------EEEEcCCCCCCC----------------CCCCcEE------EEE
Q 010794 379 ------KEIY--------------------------TIRWSPTGSGTN----------------NPNQQLI------LAS 404 (501)
Q Consensus 379 ------~~v~--------------------------~i~~~p~g~~~~----------------~~~~~~~------l~s 404 (501)
.++. .++++|+..... ......+ +..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 0110 112222211000 0000000 111
Q ss_pred --Ee------CCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--E
Q 010794 405 --AS------FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--F 474 (501)
Q Consensus 405 --gs------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~ 474 (501)
.+ ..|.|..||+.+++.+++.... .++..-.....+.+++.|+.|+.|+.||.++|+++..+....++ .
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 01 4588999999999999887521 22221112224667778999999999999999999888654332 2
Q ss_pred EEEECCCCCE-EEEE
Q 010794 475 EVCWNKEGDK-IAAC 488 (501)
Q Consensus 475 ~~~ws~~g~~-la~~ 488 (501)
-+.|..+|++ +++.
T Consensus 520 P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 520 PMTYTHKGTQYVAIY 534 (599)
T ss_dssp CEEEEETTEEEEEEE
T ss_pred cEEEEeCCEEEEEEE
Confidence 3566778874 4443
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.81 E-value=5.9e-06 Score=78.05 Aligned_cols=263 Identities=10% Similarity=0.041 Sum_probs=138.0
Q ss_pred ccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeec---------c----ccccCCCCe
Q 010794 149 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK---------G----RTNEKSKDV 215 (501)
Q Consensus 149 l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~V 215 (501)
+.+.-....+++|+++|++++++..++.|..|+..++.. . .+.... + ........+
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~---------~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~p 82 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF---------V--DFAYASPYWNKAFCENSTDAEKRPLCGRT 82 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE---------E--EEEESCTTCCHHHHTTCCCGGGHHHHCCE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce---------E--EEecccccccccccccccchhccccCCCC
Confidence 344334567889999999888888999999998754321 0 010000 0 000011347
Q ss_pred EEEEECC-CCCEEEEEeCCCeEEEEECCCceeEeecCC-----CCCEEEEEecC-CCCEEEEEecCCeEEEEeCCCccee
Q 010794 216 TTLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKH-----KGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWK 288 (501)
Q Consensus 216 ~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h-----~~~V~~l~~~~-~~~~l~s~s~D~~i~iwd~~~~~~~ 288 (501)
..+++.+ +++ |+.+...+.+..++..+.....+... ......+++.+ +|+..++-.... +..+. ..
T Consensus 83 ~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~----~~~~~--~~ 155 (322)
T 2fp8_A 83 YDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL----YDDRG--VQ 155 (322)
T ss_dssp EEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSS----CCTTC--HH
T ss_pred ceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccc----ccccc--cc
Confidence 8899997 565 44554455588888765433222211 12346677777 666544432210 00000 00
Q ss_pred EeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEeCCC
Q 010794 289 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~i~iwd~~~ 367 (501)
. .++.....+.|+.++....... .+.......+.++++|+++.| ++-+..+.|.+|++..
T Consensus 156 ~------------------~~~~~~~~g~v~~~d~~~~~~~-~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 156 Q------------------IMDTSDKTGRLIKYDPSTKETT-LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp H------------------HHHHTCCCEEEEEEETTTTEEE-EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred e------------------ehcccCCCceEEEEeCCCCEEE-EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 0 0000001122333333222111 111111235679999999854 4546678899999874
Q ss_pred Cc--eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEe---------CCCeEEEEeCCCCeEEEEeeCC----CCCe
Q 010794 368 DK--YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS---------FDSTVKLWDVELGKLLYSLNGH----REPV 432 (501)
Q Consensus 368 ~~--~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs---------~dg~i~iwd~~~~~~~~~~~~h----~~~v 432 (501)
.. ....+....+ ...+++.++|. ++++... ..+.|..+|.. ++.+..+... ...+
T Consensus 217 ~~~~~~~~~~~~~g-P~gi~~d~~G~--------l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~ 286 (322)
T 2fp8_A 217 PKKGTAEVLVKIPN-PGNIKRNADGH--------FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHF 286 (322)
T ss_dssp TTTTCEEEEEECSS-EEEEEECTTSC--------EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCC
T ss_pred CcCCccceEEeCCC-CCCeEECCCCC--------EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccc
Confidence 21 1111111222 56778877774 3444433 14668888874 6766665433 2346
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010794 433 YSLAFSPTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 433 ~~l~~spdg~~lasgs~Dg~i~iw~~~ 459 (501)
+.+++ .+++++++....+.|.++++.
T Consensus 287 ~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 287 EQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred eEEEE-eCCEEEEeecCCCceEEEecc
Confidence 67776 456666666677888888875
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.80 E-value=6.2e-07 Score=89.62 Aligned_cols=183 Identities=9% Similarity=0.070 Sum_probs=125.5
Q ss_pred ceEEEecCCCeEEEEEcCCCcceeeecC-CCCceeEEEE-c-CCCCEEEEEe------------------CCCeEEEEeC
Q 010794 307 VSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKW-D-PTGSLLASCS------------------DDVTAKIWNM 365 (501)
Q Consensus 307 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~-~-~~~~~l~s~s------------------~Dg~i~iwd~ 365 (501)
..|+....+..|.+.|+...+..+.+.- ....+..+++ + |+++++++++ .++.+.+.|.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 4566677788899999988887664431 1234778887 5 9999988885 3457899999
Q ss_pred CCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-------------------------------------
Q 010794 366 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD------------------------------------- 408 (501)
Q Consensus 366 ~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d------------------------------------- 408 (501)
.+.+.+.++.... ....++.+|+|. ++++.+.+
T Consensus 183 ~t~~v~~qI~Vgg-~pd~~~~spdGk---------~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 183 DKWEVAWQVLVSG-NLDNCDADYEGK---------WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp TTTEEEEEEEESS-CCCCEEECSSSS---------EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CCCeEEEEEEeCC-CccceEECCCCC---------EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 9887776655322 234556777765 22233222
Q ss_pred -CeEEEEeCCC--CeE-EEEeeCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCe------------eEEEEecCC
Q 010794 409 -STVKLWDVEL--GKL-LYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGK------------IVKTYTGNG 471 (501)
Q Consensus 409 -g~i~iwd~~~--~~~-~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~------------~~~~~~~~~ 471 (501)
+.|.+.|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ ++.......
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 2477777776 444 334432 12346799999999876655 67899999998653 344555455
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 472 GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 472 ~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+...++|+|+|....+...++.|.+||+.
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 78999999999555577889999999963
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.80 E-value=1.5e-05 Score=72.92 Aligned_cols=223 Identities=11% Similarity=0.034 Sum_probs=132.9
Q ss_pred CEEEEEecCCeEEEEeCCCccee-----EeeeeccCCeEEEec--CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCc
Q 010794 266 DYLLTGSCDKTAIVWDVKTEEWK-----QQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE 338 (501)
Q Consensus 266 ~~l~s~s~D~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~ 338 (501)
.+|+.+.. +.|+.+++...... ..+......+..+.+ ..+..+++....+.|+.++.........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34555543 47888887654321 111111122334444 34566777777889999998765543333333346
Q ss_pred eeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC--CCeEEEEe
Q 010794 339 VNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF--DSTVKLWD 415 (501)
Q Consensus 339 v~~v~~~~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~--dg~i~iwd 415 (501)
...++++|++. ++++....+.|.++++........+.........++++|++. .+.++... .+.|..++
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g--------~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRG--------NLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT--------EEEEEECCSSSCEEEEEE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCC--------EEEEEECCCCCcEEEEEe
Confidence 78999999754 555666678999999865432211211224567889988543 13333332 46888888
Q ss_pred CCCCeEEEEe-eCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCe
Q 010794 416 VELGKLLYSL-NGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHT 493 (501)
Q Consensus 416 ~~~~~~~~~~-~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~ 493 (501)
+... ....+ .......+.++++|++.+|. +-...+.|.+++..................++.. .+..+++...++.
T Consensus 153 ~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 153 MDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp TTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTE
T ss_pred cCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCe
Confidence 7532 22222 22234578999999876664 5556689999999765544444444446677764 3445555556788
Q ss_pred EEEEEe
Q 010794 494 VCVLDF 499 (501)
Q Consensus 494 v~v~~~ 499 (501)
|.++|.
T Consensus 231 v~~~d~ 236 (267)
T 1npe_A 231 VIAMDL 236 (267)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 988875
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.79 E-value=1.4e-05 Score=74.83 Aligned_cols=225 Identities=12% Similarity=0.070 Sum_probs=132.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecC-C-eEEEEeCCCcceeEe
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-K-TAIVWDVKTEEWKQQ 290 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D-~-~i~iwd~~~~~~~~~ 290 (501)
.....++|+++|+++++-..++.|..|+..+.....+. ......++++.++|+.+++.... + .|..+|..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 34678999999998777778899999998776544332 23467899999999865554332 2 466667666553221
Q ss_pred eeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 010794 291 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 370 (501)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~ 370 (501)
.... .......++..+.+..+++...++.|.++|..++..
T Consensus 111 ~~~~----------------------------------------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 111 LTLP----------------------------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp EECT----------------------------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EeCC----------------------------------------CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 1100 001112333334444444444566777777654311
Q ss_pred -ee---------ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeE--EEEeeCCCCCeEEEEE
Q 010794 371 -VH---------DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKL--LYSLNGHREPVYSLAF 437 (501)
Q Consensus 371 -~~---------~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~l~~ 437 (501)
+. ...........+ +|++. .++++-+..+.|..|++.. ++. ...+.. ......|++
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~--------~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~v 219 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGN--------FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAF 219 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETT--------EEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEE
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCC--------EEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEE
Confidence 10 000011122334 45543 3556666788999999864 321 111111 123466899
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEE--EEecC-CCEEEEEEC---CCCCEEEEEEC
Q 010794 438 SPTGEYLASGSLDKSMHIWSLKEGKIVK--TYTGN-GGIFEVCWN---KEGDKIAACFA 490 (501)
Q Consensus 438 spdg~~lasgs~Dg~i~iw~~~~~~~~~--~~~~~-~~i~~~~ws---~~g~~la~~~~ 490 (501)
+++|+++++....+.|.+|+.. |++.. .+... ..+.+++|. |+++.|..+..
T Consensus 220 d~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 220 DVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp BTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 9999988887778899999975 66532 23332 458999999 89887776654
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.77 E-value=4.8e-05 Score=77.80 Aligned_cols=80 Identities=19% Similarity=0.451 Sum_probs=57.8
Q ss_pred CCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEE--EEEECCCCC-E
Q 010794 408 DSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIF--EVCWNKEGD-K 484 (501)
Q Consensus 408 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~--~~~ws~~g~-~ 484 (501)
+|.|..||+.+++.+++..... ++..-.....+.+++.|+.||.|+.||.++|+++..+....++. -+.|..+|+ +
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 6889999999999998876432 22221112246678889999999999999999999887655443 366778897 4
Q ss_pred EEEE
Q 010794 485 IAAC 488 (501)
Q Consensus 485 la~~ 488 (501)
+++.
T Consensus 544 v~~~ 547 (582)
T 1flg_A 544 LGVT 547 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.76 E-value=6.5e-07 Score=89.49 Aligned_cols=216 Identities=11% Similarity=0.058 Sum_probs=138.9
Q ss_pred CCCCEEEEEec-CCeEEEEeCCCcceeEeeeecc-CCeEEEec---CCCce-EEEe-----------------cCCCeEE
Q 010794 263 KKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHS-GPTLDVDW---RNNVS-FATS-----------------STDNMIY 319 (501)
Q Consensus 263 ~~~~~l~s~s~-D~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~---~~~~~-~~~~-----------------~~d~~i~ 319 (501)
++|++|+.+.. +.+|.+.|+.+.++...+.... .....+.+ .+... |+++ ..++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47777766554 5679999999999888665432 23444443 33333 3332 2245788
Q ss_pred EEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCC--------------------------------------eEE
Q 010794 320 VCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--------------------------------------TAK 361 (501)
Q Consensus 320 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg--------------------------------------~i~ 361 (501)
+.|..+.+.+.++.--. ....++++|+|+++++++.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 88888776665554211 345688999999988877553 244
Q ss_pred EEeCCC--Cce-eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe------------EEEEee
Q 010794 362 IWNMKQ--DKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK------------LLYSLN 426 (501)
Q Consensus 362 iwd~~~--~~~-~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~------------~~~~~~ 426 (501)
+.|..+ ++. +..+.. .....++.++|+|. ++++++..+++|.++|+.+.+ .+.++.
T Consensus 258 VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk--------~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKK--------HLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp EEECSGGGCCSSEEEEEE-ESSCCCEEECTTSS--------EEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred EEeCcccCCceeEEEEec-CCCceEEEEcCCCC--------EEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 555554 222 222221 12345567777775 678888889999999998652 333443
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC----------CeeEEEEecCCCEEEE------EECCCCCEEEEEE
Q 010794 427 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE----------GKIVKTYTGNGGIFEV------CWNKEGDKIAACF 489 (501)
Q Consensus 427 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~----------~~~~~~~~~~~~i~~~------~ws~~g~~la~~~ 489 (501)
- ......++|+|+|...++.-.|+.|.+|++.+ ...+..+..+-.+-.. ..+|||++|+++.
T Consensus 329 v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 329 L-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp C-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred C-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 2 23468899999994445666799999999977 4567776655444223 4589999998873
No 258
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.73 E-value=7.9e-05 Score=70.41 Aligned_cols=266 Identities=11% Similarity=0.075 Sum_probs=142.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCcee-Ee--e--cCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcce
Q 010794 213 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK-CT--L--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 287 (501)
Q Consensus 213 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~--~--~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 287 (501)
..+.++.|.+.+..++. +..|.| +...++... .. . ......+.+|.|.+ + .++.++.++.|..-.=....|
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~S~DgG~tW 111 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLHTTDGGQSW 111 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEEESSTTSSC
T ss_pred CcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEEECCCCCCc
Confidence 46889999888887774 556765 333443221 11 1 11244688999986 3 344455667555432111223
Q ss_pred eEeeee--ccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcce-eeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEe
Q 010794 288 KQQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI-KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 364 (501)
Q Consensus 288 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd 364 (501)
...... ..+.+..+.+.+...+...+.++.|+.-. ..++.- ....++...+..+++.|++.+++.+...+..+-+|
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTK-DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEES-STTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred eECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEc-CCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 322111 11234444443333333333455443321 112111 12234456788999999998887765544444444
Q ss_pred C--CCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-C---CCCCeEEEEEC
Q 010794 365 M--KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-G---HREPVYSLAFS 438 (501)
Q Consensus 365 ~--~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~---h~~~v~~l~~s 438 (501)
- .+...+. ......+..+.+.+++. ++ .++.+|.+++++...++.-..+. . +...+.+|+|.
T Consensus 191 ~gG~tW~~~~--~~~~~~~~~~~~~~~g~---------~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 191 PGQTAWEPHN--RTTSRRLHNMGFTPDGR---------LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp TTCSSCEEEE--CCSSSCEEEEEECTTSC---------EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred CCCCceeECC--CCCCCccceeEECCCCC---------EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 2 2233322 23345678888888764 33 44567888776433233222222 1 22358999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeeEEEEe----cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 439 PTGEYLASGSLDKSMHIWSLKEGKIVKTYT----GNGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 439 pdg~~lasgs~Dg~i~iw~~~~~~~~~~~~----~~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
|++.+++++. +|.| ++....|+.=.... ....++++.|.+++ .+++++.+|.|..++
T Consensus 259 ~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 259 TPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp SSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred CCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 9888777655 6766 44555454322222 12457889897554 566667788876654
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=2.2e-06 Score=76.71 Aligned_cols=179 Identities=11% Similarity=0.024 Sum_probs=127.0
Q ss_pred CEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCe-EEEecCCCceEEEecCCCeEEEEEcCCCcceeeec
Q 010794 255 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA 333 (501)
Q Consensus 255 ~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 333 (501)
-..+|.|+. +..+++.+.+|.|+++|+.+++....+ ...... ..+....+..+++.-.++.++++|..+.+.+.++.
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 357888873 455667778889999999999988887 433221 33666677788888889999999999998888876
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCC-----CCEEEEEEcCCCCCCCCCCCcEEEEEEeCC
Q 010794 334 GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASASFD 408 (501)
Q Consensus 334 ~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d 408 (501)
.- ..-..++ ++++.|+.+..++.|.++|..+.+.+..+.... ..+..+.|. +|. +.+....+
T Consensus 134 ~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~---------lyanvw~s 200 (268)
T 3nok_A 134 YS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV---------IYANIWHS 200 (268)
T ss_dssp CS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEETTC
T ss_pred CC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE---------EEEEECCC
Confidence 42 2223444 567777666678899999999988776654321 133556665 442 44555568
Q ss_pred CeEEEEeCCCCeEEEEeeCC-------------CCCeEEEEECCCCCEEEEEe
Q 010794 409 STVKLWDVELGKLLYSLNGH-------------REPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 409 g~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spdg~~lasgs 448 (501)
+.|.+.|..+++.+..+.-. ....+.|||+|+++.|...+
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 89999999999998876531 13568899999865544433
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.71 E-value=1.1e-06 Score=91.82 Aligned_cols=269 Identities=15% Similarity=0.123 Sum_probs=146.3
Q ss_pred EEEECC-CCCEEEEEECCC-----------cEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 158 ACAWSP-AGSLLASGSGDS-----------TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 158 ~~~~sp-~~~~l~sgs~D~-----------~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
++++.| ++++++.||.+. .+.+||+.++.... +. ... . .+.....++++..+++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~------~~--~~~---~---~~~~~~~~~~~~~~g~ 255 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD------RT--VTV---T---KHDMFCPGISMDGNGQ 255 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC------CE--EEE---C---SCCCSSCEEEECTTSC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe------Cc--ccC---C---CCCCccccccCCCCCC
Confidence 566777 888999888653 57889887664321 00 000 0 1112233567788999
Q ss_pred EEEEEeC-CCeEEEEECCCceeEeecC-CC-CCEEEEEecCCCCEEEEEe-cC-----CeEEEEeCCCcceeEeeeeccC
Q 010794 226 LLATGSY-DGQARIWSTNGDLKCTLSK-HK-GPIFSLKWNKKGDYLLTGS-CD-----KTAIVWDVKTEEWKQQFEFHSG 296 (501)
Q Consensus 226 ~l~sg~~-dg~i~iw~~~~~~~~~~~~-h~-~~V~~l~~~~~~~~l~s~s-~D-----~~i~iwd~~~~~~~~~~~~~~~ 296 (501)
+++.|+. +..+.+||.....-..+.. +. ..-.++...++++.++.|+ .+ ..+.+||+.+..|...-.....
T Consensus 256 lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 256 IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred EEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence 9999985 4589999976443222211 11 1113445567888888888 34 5799999998887653110000
Q ss_pred CeE-----EEecCCCceEEEecCC---------CeEEEEEcCCCcceeeecCCC---------CceeEEEEc-CCCCEEE
Q 010794 297 PTL-----DVDWRNNVSFATSSTD---------NMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWD-PTGSLLA 352 (501)
Q Consensus 297 ~~~-----~~~~~~~~~~~~~~~d---------~~i~~~~~~~~~~~~~~~~h~---------~~v~~v~~~-~~~~~l~ 352 (501)
+.. .+...++..++.++.+ ..+..|+.....-......+. ..-.++.|. .++++++
T Consensus 336 p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 336 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 000 1111233334444333 345667766554222211111 112344443 3678888
Q ss_pred EEeCCC-----------eEEEEeCCCCceeeec--ccCCCC-EEEEEEcCCCCCCCCCCCcEEEEEEeCC----------
Q 010794 353 SCSDDV-----------TAKIWNMKQDKYVHDL--REHSKE-IYTIRWSPTGSGTNNPNQQLILASASFD---------- 408 (501)
Q Consensus 353 s~s~Dg-----------~i~iwd~~~~~~~~~~--~~~~~~-v~~i~~~p~g~~~~~~~~~~~l~sgs~d---------- 408 (501)
.|+.++ .|.+||..+....... ..+... ..+....|++. +++.|+.+
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~---------i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS---------TFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC---------EEEECCBSBCCTTCCCSB
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC---------EEEECCcccCcCcCCCCc
Confidence 887543 6778887765543321 111221 12333445654 55666643
Q ss_pred -CeEEEEeCCCCeEEE--EeeCCCCCeEEEEECCCCCEEEEEeC
Q 010794 409 -STVKLWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 409 -g~i~iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~ 449 (501)
..+.+||..+.+-.. .+...+....+..+.|+|++++.||.
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999987665321 12212222345567899999999985
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=7.4e-06 Score=72.68 Aligned_cols=181 Identities=13% Similarity=0.117 Sum_probs=124.7
Q ss_pred CCEEEEEecCCCCEEEEEecC--CeEEEEeCCCcceeEeeeeccCCe-EEEecCCCceEEEecCCCeEEEEEcCCCccee
Q 010794 254 GPIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIK 330 (501)
Q Consensus 254 ~~V~~l~~~~~~~~l~s~s~D--~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 330 (501)
.-..+|.|++ +..+.+.+.+ .+|+.+|+.+++............ ..+....+..++..-.++.++++|..+.+.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 3467899987 4445555554 489999999999988776544332 33455567778888889999999999988888
Q ss_pred eecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCC-----CCEEEEEEcCCCCCCCCCCCcEEEEEE
Q 010794 331 TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASA 405 (501)
Q Consensus 331 ~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~p~g~~~~~~~~~~~l~sg 405 (501)
++.... .-..++ ++++.|+.+..++.|.++|..+.+.+..+.... ..+..+.|. +|. +.+..
T Consensus 100 ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~---------lyanv 166 (243)
T 3mbr_X 100 RFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE---------LLANV 166 (243)
T ss_dssp EEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEE
T ss_pred EEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE---------EEEEE
Confidence 876422 224454 456655555568899999999888776654321 233455554 332 44555
Q ss_pred eCCCeEEEEeCCCCeEEEEeeCC-------------CCCeEEEEECCCCCEEEEEe
Q 010794 406 SFDSTVKLWDVELGKLLYSLNGH-------------REPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 406 s~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spdg~~lasgs 448 (501)
-.+..|.+.|..+++.+..+.-. ....+.|||+|+++.|...|
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 56789999999999998876521 12468899999876655544
No 262
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.70 E-value=7.2e-06 Score=73.39 Aligned_cols=177 Identities=8% Similarity=0.002 Sum_probs=123.0
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCC
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 378 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 378 (501)
..+.|..+..+++.+.++.|+++|+.+++.+..+......--.+++.. ++++++.-.++.+.+||..+.+.+.++....
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~ 136 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSG 136 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSS
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCC
Confidence 456666777888999999999999999988777621111123455543 3555666678999999999999888776432
Q ss_pred CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CC---CCeEEEEECCCCCEEEEEeCCCcE
Q 010794 379 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HR---EPVYSLAFSPTGEYLASGSLDKSM 453 (501)
Q Consensus 379 ~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~l~~spdg~~lasgs~Dg~i 453 (501)
.-..++ +++. .+++ +..++.|.++|..+.+.+.++.- +. ..++.+.|. +|...|..-.+..|
T Consensus 137 -eGwGLt--~Dg~--------~L~v-SdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 137 -EGWGLC--YWNG--------KLVR-SDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp -CCCCEE--EETT--------EEEE-ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred -ceeEEe--cCCC--------EEEE-ECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 223343 3332 2333 44588999999999988877653 21 245778887 77666655568899
Q ss_pred EEEeCCCCeeEEEEecC--------------CCEEEEEECCCCCEEEEEE
Q 010794 454 HIWSLKEGKIVKTYTGN--------------GGIFEVCWNKEGDKIAACF 489 (501)
Q Consensus 454 ~iw~~~~~~~~~~~~~~--------------~~i~~~~ws~~g~~la~~~ 489 (501)
.+.|..+|+++..+... ...+.+||+|+++.|...+
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999999998877431 2478999999876555443
No 263
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.68 E-value=4.9e-06 Score=74.47 Aligned_cols=178 Identities=12% Similarity=0.145 Sum_probs=120.6
Q ss_pred EEEecCCCceEEEecCCC--eEEEEEcCCCcceeeecCCCCc-eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecc
Q 010794 299 LDVDWRNNVSFATSSTDN--MIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 375 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 375 (501)
..+.|.++..+.+++.++ .|+++|+.+++.+..+.-.... --.++.. .+++.++.-.++.+.+||..+.+.+.++.
T Consensus 46 qGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred ceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence 445565666677777766 8999999999887776533222 1234443 23444555568899999999999888776
Q ss_pred cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--C---CCeEEEEECCCCCEEEEEeCC
Q 010794 376 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--R---EPVYSLAFSPTGEYLASGSLD 450 (501)
Q Consensus 376 ~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~---~~v~~l~~spdg~~lasgs~D 450 (501)
... .-..++ +++. .++++ ..++.|.++|..+.+.+.++.-. . ..++.+.|. +|...|..-.+
T Consensus 125 ~~~-eG~glt--~dg~--------~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 125 YDG-EGWGLT--HNDQ--------YLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp CSS-CCCCEE--ECSS--------CEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred CCC-CceEEe--cCCC--------EEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 432 223333 3332 23333 44788999999998888776532 1 335668886 77666665568
Q ss_pred CcEEEEeCCCCeeEEEEecC-------------CCEEEEEECCCCCEEEEEEC
Q 010794 451 KSMHIWSLKEGKIVKTYTGN-------------GGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 451 g~i~iw~~~~~~~~~~~~~~-------------~~i~~~~ws~~g~~la~~~~ 490 (501)
..|.+.|..+|+++..+... ...+.+||+|+++.|...+.
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 89999999999998887542 24689999999887666544
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.65 E-value=0.00013 Score=69.60 Aligned_cols=242 Identities=9% Similarity=-0.002 Sum_probs=147.3
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeee
Q 010794 215 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 215 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
.+|.+..+++ +|+.+. ...|+..++.+.....+......+.+++|++.+..|+ +-...+.|..+++........+..
T Consensus 36 ~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 36 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 3455545533 343333 3457777777654443333334578999998766665 445678899999877654333222
Q ss_pred c--cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCE-EEEEeCC-CeEEEEeCCCCc
Q 010794 294 H--SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDD-VTAKIWNMKQDK 369 (501)
Q Consensus 294 ~--~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~D-g~i~iwd~~~~~ 369 (501)
. ...-+.++|.....+++-...+.|.+.+.........+.........++++|.+.. +++-... +.|..+++....
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 1 12235677777777888888889999988765433333334456789999996554 4554444 778888876443
Q ss_pred eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeC
Q 010794 370 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 370 ~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~ 449 (501)
....+.........++++|.+. .+..+-+..+.|..+++........+.........|++. .+.++++-..
T Consensus 194 ~~~~~~~~~~~PnGla~d~~~~--------~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 194 RRIIADTHLFWPNGLTIDYAGR--------RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp CEESCCSSCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred cEEEEECCCCCcceEEEeCCCC--------EEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 2222222234567899987653 244445567889999987433222233233456778883 4555566566
Q ss_pred CCcEEEEeCCCCeeEEEE
Q 010794 450 DKSMHIWSLKEGKIVKTY 467 (501)
Q Consensus 450 Dg~i~iw~~~~~~~~~~~ 467 (501)
.+.|..++..+|+.+..+
T Consensus 265 ~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 265 TKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTEEEEEETTTCCSCEEE
T ss_pred CCeEEEEEccCCCccEEe
Confidence 788999987677655444
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.61 E-value=1.9e-05 Score=80.81 Aligned_cols=229 Identities=13% Similarity=0.101 Sum_probs=138.2
Q ss_pred CCEEEEEecCCeEEEEeCCCcceeEeeeecc---------CCeEEEecCCCc-eEEEec------CCCeEEEEEcCCCcc
Q 010794 265 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS---------GPTLDVDWRNNV-SFATSS------TDNMIYVCKIGENRP 328 (501)
Q Consensus 265 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~------~d~~i~~~~~~~~~~ 328 (501)
+..++.++.|+.|..+|..+++.+-.+.... .++..-.-.... .++.++ .++.|+.+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 4678888899999999999998765554322 122111100111 333332 367888888877765
Q ss_pred eeeecCCC-----------------------------------------CceeEEEEcCCCCEEEEEeC-----------
Q 010794 329 IKTFAGHQ-----------------------------------------GEVNCVKWDPTGSLLASCSD----------- 356 (501)
Q Consensus 329 ~~~~~~h~-----------------------------------------~~v~~v~~~~~~~~l~s~s~----------- 356 (501)
+-.+.... ..-..+++.|...+|..++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 43332110 00023566777777766553
Q ss_pred ---------C----CeEEEEeCCCCceeeeccc--CC--------CCEEEEEEc-CCCCCCCCCCCcEEEEEEeCCCeEE
Q 010794 357 ---------D----VTAKIWNMKQDKYVHDLRE--HS--------KEIYTIRWS-PTGSGTNNPNQQLILASASFDSTVK 412 (501)
Q Consensus 357 ---------D----g~i~iwd~~~~~~~~~~~~--~~--------~~v~~i~~~-p~g~~~~~~~~~~~l~sgs~dg~i~ 412 (501)
| +.|..+|..+++.+-.++. |. .++. +... .+|. ...+++.++.+|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~------~~~~v~~~~~~G~l~ 349 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGK------IVKATAHADRNGFFY 349 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSC------EEEEEEEECTTSEEE
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCC------EEEEEEEECCCceEE
Confidence 2 5899999999988765532 21 1111 1110 2221 012677899999999
Q ss_pred EEeCCCCeEEEEeeCCC-------------CCe--------------------------------EEEEECCCCCEEEEE
Q 010794 413 LWDVELGKLLYSLNGHR-------------EPV--------------------------------YSLAFSPTGEYLASG 447 (501)
Q Consensus 413 iwd~~~~~~~~~~~~h~-------------~~v--------------------------------~~l~~spdg~~lasg 447 (501)
++|..+|+.+....... .++ ..++|+|+..++.+.
T Consensus 350 ~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~ 429 (582)
T 1flg_A 350 VVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVP 429 (582)
T ss_dssp EEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEE
T ss_pred EEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEe
Confidence 99999999987765331 000 135677765554433
Q ss_pred e---------------------------------CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeE
Q 010794 448 S---------------------------------LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTV 494 (501)
Q Consensus 448 s---------------------------------~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~d~~v 494 (501)
. .+|.|..||+.+|+.+........+..-.....|..+..|+.|+.|
T Consensus 430 ~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l 509 (582)
T 1flg_A 430 ANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYF 509 (582)
T ss_dssp EECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEE
T ss_pred chhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcE
Confidence 2 3688999999999998776543322221222346678889999999
Q ss_pred EEEEee
Q 010794 495 CVLDFR 500 (501)
Q Consensus 495 ~v~~~~ 500 (501)
+.||.+
T Consensus 510 ~A~D~~ 515 (582)
T 1flg_A 510 KAFDAK 515 (582)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999864
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.59 E-value=3e-05 Score=68.83 Aligned_cols=179 Identities=11% Similarity=0.071 Sum_probs=122.9
Q ss_pred eEEEecCCCceEEEecCC--CeEEEEEcCCCcceeeecCCCCc-eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeec
Q 010794 298 TLDVDWRNNVSFATSSTD--NMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 374 (501)
Q Consensus 298 ~~~~~~~~~~~~~~~~~d--~~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 374 (501)
+..+.|.++..+.+.+.+ ..|+.+|+.+++.+....-.... --.+++. .+++++..-.++.+.+||..+.+.+.++
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 345667677777777775 48999999999888766533221 1234443 2455566667899999999999988887
Q ss_pred ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----CCeEEEEECCCCCEEEEEeC
Q 010794 375 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----EPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 375 ~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~spdg~~lasgs~ 449 (501)
.... .-..++ +++. .+++| ..++.|.++|..+.+.+.++.-.. ..++.+.|. +|...|..-.
T Consensus 102 ~~~~-~Gwglt--~dg~--------~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 102 RYPG-EGWALT--SDDS--------HLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp ECSS-CCCEEE--ECSS--------CEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred eCCC-CceEEe--eCCC--------EEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 6533 334444 3332 23444 457899999999998887765321 345677776 6666665556
Q ss_pred CCcEEEEeCCCCeeEEEEecC--------------CCEEEEEECCCCCEEEEEEC
Q 010794 450 DKSMHIWSLKEGKIVKTYTGN--------------GGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 450 Dg~i~iw~~~~~~~~~~~~~~--------------~~i~~~~ws~~g~~la~~~~ 490 (501)
+..|.+.|..+|+++..+... ...+.+||+|+++.|...+.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 789999999999998877521 24689999999876665543
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.59 E-value=0.00011 Score=71.22 Aligned_cols=242 Identities=9% Similarity=0.006 Sum_probs=147.4
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeec
Q 010794 216 TTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFH 294 (501)
Q Consensus 216 ~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~ 294 (501)
.|.+..+. .+|+.+. ...|+..++.+.....+......+.+++|++.+..|+ +-...+.|..+++........+...
T Consensus 80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred eECCcccc-ceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 34444443 3444333 3567777877654443333344578999998666555 5556788999998776543332221
Q ss_pred --cCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCC-CeEEEEeCCCCce
Q 010794 295 --SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDD-VTAKIWNMKQDKY 370 (501)
Q Consensus 295 --~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~D-g~i~iwd~~~~~~ 370 (501)
...-+.++|.....+++-...+.|.+.++........+.........++++|.+..| ++-... +.|..+++.....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 122356677777777887778888888876544333333334567899999876654 444444 6788888764432
Q ss_pred eeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCC
Q 010794 371 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 450 (501)
Q Consensus 371 ~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 450 (501)
...+.........|+++|.+. .+..+-+..+.|..+++........+.........|++ ..+.++++-...
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~--------~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~ 308 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGR--------RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHT 308 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGT--------EEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTT
T ss_pred EEEEECCCCCeeeEEEeCCCC--------EEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCC
Confidence 222222234467899987653 24445556788999998643322223333345678888 344555666677
Q ss_pred CcEEEEeCCCCeeEEEEe
Q 010794 451 KSMHIWSLKEGKIVKTYT 468 (501)
Q Consensus 451 g~i~iw~~~~~~~~~~~~ 468 (501)
+.|..++..+|+.+..+.
T Consensus 309 ~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 309 KSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TEEEEEETTTCCSCEEEE
T ss_pred CeEEEEECCCCcceEEEc
Confidence 899999977776655554
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=2.7e-05 Score=82.50 Aligned_cols=195 Identities=12% Similarity=0.078 Sum_probs=112.4
Q ss_pred CCcc-ceeEEEEC-CCCCEEEEE-ECCC----cEEEEecCCC-CCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECC
Q 010794 151 GHTS-EVCACAWS-PAGSLLASG-SGDS----TARIWTIADG-TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 222 (501)
Q Consensus 151 ~H~~-~V~~~~~s-p~~~~l~sg-s~D~----~i~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~ 222 (501)
+|.. .+...+|| |||++||-+ +.+| .|+++|+.++ .... .. +. .....++|+|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~----~~-----~~----------~~~~~~~Wsp 230 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA----DK-----VS----------GTNGEIVWGP 230 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC----CC-----EE----------EECSCCEECS
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC----cc-----cc----------CceeeEEEec
Confidence 4554 68889999 999987743 3333 5999999876 4210 00 00 0124578999
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCce---eEeec-CCCCCEEEEEecCCCCEEEEEec---CCeEEEEeCCCc--ce-
Q 010794 223 EGTLLATGSYD-----GQARIWSTNGDL---KCTLS-KHKGPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKTE--EW- 287 (501)
Q Consensus 223 ~~~~l~sg~~d-----g~i~iw~~~~~~---~~~~~-~h~~~V~~l~~~~~~~~l~s~s~---D~~i~iwd~~~~--~~- 287 (501)
||+.|+....+ ..|+++++.+.. ...+. .......++.|+|+|++|+..+. ...|.++|+.++ ..
T Consensus 231 Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~ 310 (751)
T 2xe4_A 231 DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT 310 (751)
T ss_dssp STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce
Confidence 99888877765 257777776532 12222 22344678899999998876553 345788898765 23
Q ss_pred -eEeeeeccCCeEEEecCCCce-EEEecCC----CeEEEEEcCCCcceee-ecCCCC--ceeEEEEcCCCCEEEEEeCCC
Q 010794 288 -KQQFEFHSGPTLDVDWRNNVS-FATSSTD----NMIYVCKIGENRPIKT-FAGHQG--EVNCVKWDPTGSLLASCSDDV 358 (501)
Q Consensus 288 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~d----~~i~~~~~~~~~~~~~-~~~h~~--~v~~v~~~~~~~~l~s~s~Dg 358 (501)
.........+...++|..... ++.+..+ ..|+.+++........ +..|.. .+..+.+. .+.++++...++
T Consensus 311 ~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g 389 (751)
T 2xe4_A 311 LEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAG 389 (751)
T ss_dssp EEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETT
T ss_pred eEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCC
Confidence 222223334555666433433 3443332 3677777754222222 233333 34556655 345567777788
Q ss_pred eEE--EEeC
Q 010794 359 TAK--IWNM 365 (501)
Q Consensus 359 ~i~--iwd~ 365 (501)
..+ ++++
T Consensus 390 ~~~l~~~dl 398 (751)
T 2xe4_A 390 LTRIWTMMA 398 (751)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 654 4554
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=0.00012 Score=72.04 Aligned_cols=237 Identities=10% Similarity=0.149 Sum_probs=142.5
Q ss_pred CeEEEEECC-CCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecC-C----eEEEEeCCCcce
Q 010794 214 DVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-K----TAIVWDVKTEEW 287 (501)
Q Consensus 214 ~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D-~----~i~iwd~~~~~~ 287 (501)
....|+|+| ++..|+.+...+.|+.++..+.....+.........|+|++++++|+.+... + .+.+.+ ..+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCce
Confidence 457889998 4555666655588899998876555554445567899999999966665542 2 122222 11111
Q ss_pred eEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCC
Q 010794 288 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMK 366 (501)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~ 366 (501)
.. ...+. .......++++| ++.++++-...+.|..++..
T Consensus 217 ~~---------------------------------------~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 217 KV---------------------------------------ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp CS---------------------------------------EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred ee---------------------------------------eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 00 00000 012345688899 77777777778899999987
Q ss_pred CCceeeeccc-CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--CeE--EEEeeCC-------------
Q 010794 367 QDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--GKL--LYSLNGH------------- 428 (501)
Q Consensus 367 ~~~~~~~~~~-~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~--~~~~~~h------------- 428 (501)
.+........ .......++|+|++. .++++-...+.|..++... +.. +..+.+.
T Consensus 257 ~~~~~~~~~~~~~~~P~gia~~pdG~--------~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 328 (430)
T 3tc9_A 257 TQETTPLFTIQDSGWEFHIQFHPSGN--------YAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKK 328 (430)
T ss_dssp TTEEEEEEECSSSSCCEEEEECTTSS--------EEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGG
T ss_pred CCcEEEEEEcCCCCcceeEEEcCCCC--------EEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcc
Confidence 6543221111 123457899999885 2445556678898887652 222 1122111
Q ss_pred --CCCeE-EEEEC--------CCCCEEEEEeCCCcEEEEeCCCCeeEEEEec---------CC---------CEEEEEEC
Q 010794 429 --REPVY-SLAFS--------PTGEYLASGSLDKSMHIWSLKEGKIVKTYTG---------NG---------GIFEVCWN 479 (501)
Q Consensus 429 --~~~v~-~l~~s--------pdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~---------~~---------~i~~~~ws 479 (501)
-..-. .++.. ++|.++++=...+.|+.++ .+|.+...... .+ ....++++
T Consensus 329 a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd 407 (430)
T 3tc9_A 329 ARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYD 407 (430)
T ss_dssp CBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEE
T ss_pred eEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEE
Confidence 01123 45553 4466667666678899998 45665433311 11 47899999
Q ss_pred C-CCCEEEEEECCCeEEEEEee
Q 010794 480 K-EGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 480 ~-~g~~la~~~~d~~v~v~~~~ 500 (501)
| +|.++++-..+..|+.+++.
T Consensus 408 ~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 408 EERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEccC
Confidence 9 57777777888999988764
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.46 E-value=3.6e-05 Score=80.32 Aligned_cols=263 Identities=10% Similarity=0.026 Sum_probs=145.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEECCCcee---Eee-cCCCCCEEEEEecCCCCEEEEEec-CCeEEE
Q 010794 217 TLDWNG-EGTLLATGSYDG-----------QARIWSTNGDLK---CTL-SKHKGPIFSLKWNKKGDYLLTGSC-DKTAIV 279 (501)
Q Consensus 217 ~~~~s~-~~~~l~sg~~dg-----------~i~iw~~~~~~~---~~~-~~h~~~V~~l~~~~~~~~l~s~s~-D~~i~i 279 (501)
.+++.+ ++++++.|+.+. .+.+||...... ..+ ..+.....++++..++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888999888653 578888764321 112 122223345677788998888884 568999
Q ss_pred EeCCCcceeEeeeeccCC--eEEEecCCCceEEEec-CC-----CeEEEEEcCCCcceee-------ecCCCCceeEEEE
Q 010794 280 WDVKTEEWKQQFEFHSGP--TLDVDWRNNVSFATSS-TD-----NMIYVCKIGENRPIKT-------FAGHQGEVNCVKW 344 (501)
Q Consensus 280 wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~d-----~~i~~~~~~~~~~~~~-------~~~h~~~v~~v~~ 344 (501)
||+.+..|...-...... .......++..++.++ .+ ..+.+||..+..-... +..... ...+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~---~~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK---QGLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT---TGGG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc---ccee
Confidence 999998877643322221 1122233566677766 33 4678888765431111 000000 0112
Q ss_pred cCCCCEEEEEeCCC---------eEEEEeCCCCceeeecccCC---------CCEEEEEEcCCCCCCCCCCCcEEEEEEe
Q 010794 345 DPTGSLLASCSDDV---------TAKIWNMKQDKYVHDLREHS---------KEIYTIRWSPTGSGTNNPNQQLILASAS 406 (501)
Q Consensus 345 ~~~~~~l~s~s~Dg---------~i~iwd~~~~~~~~~~~~~~---------~~v~~i~~~p~g~~~~~~~~~~~l~sgs 406 (501)
..++..++.|+.+| .+..||..+......+.... ....++.|...+ . .+++.|+
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~-------~-~i~v~GG 418 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVK-------G-KILTFGG 418 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTT-------T-EEEEECC
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCC-------C-eEEEEeC
Confidence 24555555565544 46778877655332221111 112333332211 1 2556666
Q ss_pred CCC-----------eEEEEeCCCCeEEEEe--eCCCCC-eEEEEECCCCCEEEEEeCC-----------CcEEEEeCCCC
Q 010794 407 FDS-----------TVKLWDVELGKLLYSL--NGHREP-VYSLAFSPTGEYLASGSLD-----------KSMHIWSLKEG 461 (501)
Q Consensus 407 ~dg-----------~i~iwd~~~~~~~~~~--~~h~~~-v~~l~~spdg~~lasgs~D-----------g~i~iw~~~~~ 461 (501)
.++ .|.+||..+..-.... ...... -.+++..|+|++++.||.+ ..+.+||..+.
T Consensus 419 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 419 SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 432 6788888766543322 111121 2345677899999999864 46899998876
Q ss_pred eeEEE--EecC-CCEEEEEECCCCCEEEEEEC
Q 010794 462 KIVKT--YTGN-GGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 462 ~~~~~--~~~~-~~i~~~~ws~~g~~la~~~~ 490 (501)
+-... .... .......+.|+|+.+++|+.
T Consensus 499 ~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 499 TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 53221 1111 11234557799999999874
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.44 E-value=0.0012 Score=61.98 Aligned_cols=224 Identities=12% Similarity=0.078 Sum_probs=133.8
Q ss_pred CeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCC----cceeEeeee--ccCCeEEEecCCC
Q 010794 234 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKT----EEWKQQFEF--HSGPTLDVDWRNN 306 (501)
Q Consensus 234 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~----~~~~~~~~~--~~~~~~~~~~~~~ 306 (501)
..|+..++.+.....+........+++|++.+..|+ +-...+.|..+++.+ ......+.. ....-+.++|...
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 457777876543333333345568999998766555 555578999999876 222222211 1222355667677
Q ss_pred ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceeeec-ccCCCCEEE
Q 010794 307 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-D-VTAKIWNMKQDKYVHDL-REHSKEIYT 383 (501)
Q Consensus 307 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-D-g~i~iwd~~~~~~~~~~-~~~~~~v~~ 383 (501)
..+++-...+.|.+++.........+.........++++|.+..|..+.. . +.|...++.... ...+ ...-.....
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~g 168 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNG 168 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceE
Confidence 77777788889999988654433333333456789999996665444433 3 678888875432 2222 122345678
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 384 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
++++|++. .+..+-+..+.|..+|+.... .+............|++. .+.++++-...+.|..++..+|
T Consensus 169 la~d~~~~--------~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 169 ITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp EEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeccCC--------EEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 89988654 244455567889999987422 222211122345778885 3555566667789999998777
Q ss_pred eeEEEE
Q 010794 462 KIVKTY 467 (501)
Q Consensus 462 ~~~~~~ 467 (501)
+.+..+
T Consensus 240 ~~~~~i 245 (316)
T 1ijq_A 240 SDVNLL 245 (316)
T ss_dssp CCCEEE
T ss_pred cceEEE
Confidence 655444
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.43 E-value=0.00029 Score=65.72 Aligned_cols=217 Identities=12% Similarity=0.078 Sum_probs=127.9
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
.....++|+|+|+++++-...+.|..|+..... ...... ......+++.++|+++++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~------------~~~~~~-------~~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------------QIHATV-------EGKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------------EEEEEC-------SSEEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce------------EEEEeC-------CCCceeEEEcCCCcEEEEeccC
Confidence 456789999999987777788999999865321 011111 2347889999999976665443
Q ss_pred C--eEEEEECCCceeEeecC--CCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEe-ee---------eccCCeE
Q 010794 234 G--QARIWSTNGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FE---------FHSGPTL 299 (501)
Q Consensus 234 g--~i~iw~~~~~~~~~~~~--h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~-~~---------~~~~~~~ 299 (501)
. .|..++........+.. .......++..+.+..+++....+.|.++|..++..... .. .......
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 2 35556644332222211 122234555555554455555688999999865421110 00 0001223
Q ss_pred EEecCCCceEEEecCCCeEEEEEcCC-Ccc--eeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeec
Q 010794 300 DVDWRNNVSFATSSTDNMIYVCKIGE-NRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDL 374 (501)
Q Consensus 300 ~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~--~~~~ 374 (501)
.+.......+++....+.|+.+++.. +.. ...+.. ......++++++|+++++....+.|.+++.. ++. +..+
T Consensus 173 gis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 173 GLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp EEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred CcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 34333445667777788899998764 211 112211 1345678999999988888888899999975 444 2233
Q ss_pred ccCCCCEEEEEEc---CCCC
Q 010794 375 REHSKEIYTIRWS---PTGS 391 (501)
Q Consensus 375 ~~~~~~v~~i~~~---p~g~ 391 (501)
........+++|. |++.
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTT
T ss_pred ccccCCceEEEEecccCCCC
Confidence 3333567888887 6653
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.39 E-value=0.0015 Score=63.36 Aligned_cols=233 Identities=12% Similarity=0.053 Sum_probs=141.1
Q ss_pred EEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEE-ecCCeEEEEeCCCcc----eeEeeeeccC--Ce
Q 010794 226 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEE----WKQQFEFHSG--PT 298 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~-s~D~~i~iwd~~~~~----~~~~~~~~~~--~~ 298 (501)
+|+.+. ...|+..++.+.....+......+.+|+|++.+..|+-+ ...+.|+.+++.... ....+..... .-
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444433 467888887765444444455677899999876666544 457889999886521 2222221111 23
Q ss_pred EEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEe-C-CCeEEEEeCCCCceeeeccc
Q 010794 299 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-D-DVTAKIWNMKQDKYVHDLRE 376 (501)
Q Consensus 299 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~-Dg~i~iwd~~~~~~~~~~~~ 376 (501)
++++|.....+++-...+.|.+.++........+.........|+++|.+.+|.... . .+.|...++........+..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 567777777788888888999888876554444443445578999999765554443 2 36788888765433222222
Q ss_pred CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 010794 377 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASGSLDKSMH 454 (501)
Q Consensus 377 ~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasgs~Dg~i~ 454 (501)
.-.....|+++|.+. .+..+=+..+.|..+|+........+. +.......|++. .+.++.+-...+.|.
T Consensus 244 ~l~~P~glavd~~~~--------~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 244 NIQWPNGITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 314 (400)
T ss_dssp SCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEE
T ss_pred CCCceEEEEEEeCCC--------EEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEE
Confidence 334567899987654 233444557789999986433222222 222345677773 334555666678899
Q ss_pred EEeCCCCeeEEEEe
Q 010794 455 IWSLKEGKIVKTYT 468 (501)
Q Consensus 455 iw~~~~~~~~~~~~ 468 (501)
.++..+|+.+..+.
T Consensus 315 ~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 315 SANRLTGSDVNLLA 328 (400)
T ss_dssp EEESSSCCCCEEEE
T ss_pred EEEcCCCCceEEEe
Confidence 99987886655554
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=3.1e-05 Score=82.08 Aligned_cols=224 Identities=10% Similarity=0.019 Sum_probs=116.6
Q ss_pred CeEEEEEC-CCCCEEEEEeC-CC----eEEEEECCCc-eeEeecCC-CCCEEEEEecCCCCEEEEEecCC-----eEEEE
Q 010794 214 DVTTLDWN-GEGTLLATGSY-DG----QARIWSTNGD-LKCTLSKH-KGPIFSLKWNKKGDYLLTGSCDK-----TAIVW 280 (501)
Q Consensus 214 ~V~~~~~s-~~~~~l~sg~~-dg----~i~iw~~~~~-~~~~~~~h-~~~V~~l~~~~~~~~l~s~s~D~-----~i~iw 280 (501)
.+...+|| |||++|+-+.. +| .|+++++.+. ... ..+ .....++.|+|+|+.|+....|. .|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--CccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57788999 99998885543 22 5999998765 311 111 11124678999998887776552 23334
Q ss_pred eCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeec-CCCCceeEEEEcCCCCEEEEEeC---
Q 010794 281 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSD--- 356 (501)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~--- 356 (501)
++.++.. .....+. .+......+.|+|||++|+..+.
T Consensus 253 ~lgt~~~---------------------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 293 (751)
T 2xe4_A 253 VMGKLQS---------------------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE 293 (751)
T ss_dssp ETTSCGG---------------------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS
T ss_pred ECCCCch---------------------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCC
Confidence 4332210 0111121 12233567899999998876553
Q ss_pred CCeEEEEeCCCCc-ee--eec-ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC----CeEEEEeCCCCeEEEE-eeC
Q 010794 357 DVTAKIWNMKQDK-YV--HDL-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFD----STVKLWDVELGKLLYS-LNG 427 (501)
Q Consensus 357 Dg~i~iwd~~~~~-~~--~~~-~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d----g~i~iwd~~~~~~~~~-~~~ 427 (501)
...|.++|+.++. .. ..+ .......+++.|+..+ .+++....+ ..|..+++.++..... +..
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~---------~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~ 364 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS---------HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVD 364 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT---------EEEEEECTTTCTTCEEEEEETTSTTCCCCEEEC
T ss_pred CceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC---------EEEEEeCCCCCCCcEEEEEcCCCcccceeeEEC
Confidence 3468888887652 11 222 2233444555543322 233443333 3566777764211112 222
Q ss_pred CCC--CeEEEEECCCCCEEEEEeCCCc--EEEEeC-------CCCeeEEEE--ecCCCEEEEEE----CCCCCEEEEE
Q 010794 428 HRE--PVYSLAFSPTGEYLASGSLDKS--MHIWSL-------KEGKIVKTY--TGNGGIFEVCW----NKEGDKIAAC 488 (501)
Q Consensus 428 h~~--~v~~l~~spdg~~lasgs~Dg~--i~iw~~-------~~~~~~~~~--~~~~~i~~~~w----s~~g~~la~~ 488 (501)
+.. .+..+.+. .+.++++...++. |.++++ .+++.+..+ .....+..+.+ +++++.++..
T Consensus 365 ~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (751)
T 2xe4_A 365 HSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRME 441 (751)
T ss_dssp CCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEE
T ss_pred CCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEE
Confidence 333 34555554 2344566677775 555564 344412333 22233455555 4577644433
No 275
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.36 E-value=0.0013 Score=67.68 Aligned_cols=328 Identities=9% Similarity=0.018 Sum_probs=172.9
Q ss_pred CccceeEEEECCCCCEEE-EEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCE-EEE
Q 010794 152 HTSEVCACAWSPAGSLLA-SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL-LAT 229 (501)
Q Consensus 152 H~~~V~~~~~sp~~~~l~-sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~-l~s 229 (501)
....+.+++|++.+..|+ +=...+.|..+++...... ..+ +. ........+++.+.+.. .++
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~----------~~v--~~----~~~~~P~GlAvD~~~~~ly~~ 101 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV----------QNV--VV----SGLLSPDGLACDWLGEKLYWT 101 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C----------EEE--EC----SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce----------EEE--Ee----CCCCCcCeEEEEecCCEEEEE
Confidence 344578999999766555 4445678888887532100 000 00 01234678888885554 444
Q ss_pred EeCCCeEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEEec--CCeEEEEeCCCcceeEeeeeccCCe--EEEecC
Q 010794 230 GSYDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPT--LDVDWR 304 (501)
Q Consensus 230 g~~dg~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 304 (501)
-...+.|.+.+.++.....+. ..-....+|++.|.+.+|+.... ...|...++................ +.++..
T Consensus 102 d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~ 181 (619)
T 3s94_A 102 DSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE 181 (619)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETT
T ss_pred eCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEcc
Confidence 556789999999886554443 33334578899997666655543 3566666665433222221111222 344444
Q ss_pred CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCC----
Q 010794 305 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE---- 380 (501)
Q Consensus 305 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~---- 380 (501)
....+++-...+.|+.+++..........+......++++..+ .++++-...+.|...|..+++....+......
T Consensus 182 ~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i 260 (619)
T 3s94_A 182 EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDI 260 (619)
T ss_dssp TTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEE
T ss_pred CCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEE
Confidence 5666666667778888877654332222222223456777655 55566666778888887665433222110000
Q ss_pred ---------------------E--EEE---------EEcCCCC-------CCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010794 381 ---------------------I--YTI---------RWSPTGS-------GTNNPNQQLILASASFDSTVKLWDVELGKL 421 (501)
Q Consensus 381 ---------------------v--~~i---------~~~p~g~-------~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 421 (501)
+ .|+ +..|.|. .+...... +|+.+. .+.|+..++.....
T Consensus 261 ~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~-~Ll~~~-~~~i~~i~l~~~~~ 338 (619)
T 3s94_A 261 HAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATE-LLLLAR-RTDLRRISLDTPDF 338 (619)
T ss_dssp EECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSE-EEEEEE-SSCEEEEESSSTTC
T ss_pred EEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCce-EEEEEc-ccceEEEecCCCcc
Confidence 0 111 1112221 11111122 333332 35677777765421
Q ss_pred ---EEEeeCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCC-EEEEEECCCeEE
Q 010794 422 ---LYSLNGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGD-KIAACFANHTVC 495 (501)
Q Consensus 422 ---~~~~~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~-~la~~~~d~~v~ 495 (501)
...+.+ ...+.+|+|.+.+..|. +-...+.|+.++.........+.. -..+..+++...+. ...+-...+.|.
T Consensus 339 ~~~~~~~~~-l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~ 417 (619)
T 3s94_A 339 TDIVLQLED-IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIE 417 (619)
T ss_dssp CCEECCCSC-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ceeEEeccc-cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEE
Confidence 111122 24578899998655554 444578899999875433323322 23467788886554 444545677787
Q ss_pred EEEe
Q 010794 496 VLDF 499 (501)
Q Consensus 496 v~~~ 499 (501)
|.++
T Consensus 418 v~~~ 421 (619)
T 3s94_A 418 VTRL 421 (619)
T ss_dssp EEET
T ss_pred EEeC
Confidence 7764
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.33 E-value=0.0002 Score=70.31 Aligned_cols=233 Identities=14% Similarity=0.153 Sum_probs=137.5
Q ss_pred EEEEEecCC--CCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc-eEEEecCC---C-eEEEEEcCCCcc
Q 010794 256 IFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTD---N-MIYVCKIGENRP 328 (501)
Q Consensus 256 V~~l~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d---~-~i~~~~~~~~~~ 328 (501)
..+|+|+|+ +..|+.+...+.|+.+|+.++....... .......+.+.... .+++.... . .+...+......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 468899984 4556665555899999997776544332 22234444443322 33333211 1 122222111110
Q ss_pred -eeeecCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeccc--CCCCEEEEEEcCCCCCCCCCCCcEEEEE
Q 010794 329 -IKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILAS 404 (501)
Q Consensus 329 -~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~--~~~~v~~i~~~p~g~~~~~~~~~~~l~s 404 (501)
...+. .......++++| +|.++++-..++.|+.++..++.....+.. .......++|+|++. .+.++
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~--------~LYva 290 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD--------WAYII 290 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS--------EEEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC--------EEEEE
Confidence 01111 123456788999 777777777788999999876655222211 112234689999874 24455
Q ss_pred EeCCCeEEEEeCC--CCeE--EEEeeCC---------------CCCeEEEEE---------CCCCCEEEEEeCCCcEEEE
Q 010794 405 ASFDSTVKLWDVE--LGKL--LYSLNGH---------------REPVYSLAF---------SPTGEYLASGSLDKSMHIW 456 (501)
Q Consensus 405 gs~dg~i~iwd~~--~~~~--~~~~~~h---------------~~~v~~l~~---------spdg~~lasgs~Dg~i~iw 456 (501)
-...+.|+.+++. ++.. ...+.+. -..-..+++ .++|.++++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 5567889997764 2321 1122111 123567999 7888888887788899999
Q ss_pred eCCCCeeEEEEecC-------------------CCEEEEEEC-CCCCEEEEEECCCeEEEEEee
Q 010794 457 SLKEGKIVKTYTGN-------------------GGIFEVCWN-KEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 457 ~~~~~~~~~~~~~~-------------------~~i~~~~ws-~~g~~la~~~~d~~v~v~~~~ 500 (501)
+. +|.+.. +.+. .....++++ ++|+++++=..++.|+.+++.
T Consensus 371 ~~-~G~v~t-~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 371 TP-EGRVTT-YAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CT-TSEEEE-EECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCCEEE-EEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 85 665433 2221 136789999 678787787889999998864
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.0014 Score=62.37 Aligned_cols=228 Identities=10% Similarity=0.020 Sum_probs=133.5
Q ss_pred EEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec--CCCceEEEecCCCeEEEEEcCCCcceeeecCC
Q 010794 258 SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGH 335 (501)
Q Consensus 258 ~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h 335 (501)
+.+..+. .+|+.+. ...|+..++.......... ....+..++| ..+..+++-...+.|+.++.........+...
T Consensus 38 C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 114 (349)
T 3v64_C 38 CKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 114 (349)
T ss_dssp EEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred ccccccC-ceeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC
Confidence 4444442 3444333 3457777776654433322 2223455555 45566677777888888888765543333333
Q ss_pred CCceeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-CeEEE
Q 010794 336 QGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKL 413 (501)
Q Consensus 336 ~~~v~~v~~~~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-g~i~i 413 (501)
......+++.+. +.++++-...+.|.+.++........+.........+++.|.+. .+..+-... +.|..
T Consensus 115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g--------~ly~td~~~~~~I~r 186 (349)
T 3v64_C 115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG--------TIYWTDWGNTPRIEA 186 (349)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT--------EEEEEECSSSCEEEE
T ss_pred CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC--------eEEEeccCCCCEEEE
Confidence 345678999875 45556666778999999875433222223334567888888543 244444444 77888
Q ss_pred EeCCCCeEEEEe-eCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEEC
Q 010794 414 WDVELGKLLYSL-NGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 414 wd~~~~~~~~~~-~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~ 490 (501)
+++.... ...+ .......+.|+|+|++..|. +-+..+.|..+++........+. .......+++ ..+...++-..
T Consensus 187 ~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~ 264 (349)
T 3v64_C 187 SSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH 264 (349)
T ss_dssp EETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred EeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCC
Confidence 8876332 2222 22234568999998766554 44556789999986543222222 2335677777 34455555566
Q ss_pred CCeEEEEE
Q 010794 491 NHTVCVLD 498 (501)
Q Consensus 491 d~~v~v~~ 498 (501)
++.|..+|
T Consensus 265 ~~~V~~~~ 272 (349)
T 3v64_C 265 TKSINSAN 272 (349)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 77777665
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.33 E-value=0.0022 Score=60.09 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=130.3
Q ss_pred EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC--CCceEEEecCCCeEEEEEcCC----CcceeeecCCCCcee
Q 010794 267 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGE----NRPIKTFAGHQGEVN 340 (501)
Q Consensus 267 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~----~~~~~~~~~h~~~v~ 340 (501)
+|+.+. ...|+..|+.+......+. ....+..+.|. .+..+++....+.|+.++... ......+........
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3568888888776544332 23344556554 456777777788999988765 222222322234567
Q ss_pred EEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCC
Q 010794 341 CVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVEL 418 (501)
Q Consensus 341 ~v~~~~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~ 418 (501)
.+++.+. +.++++-...+.|.++++........+.........+++.|.+. .++.+.... +.|...++..
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g--------~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG--------FMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT--------EEEEEECSSSCEEEEEETTS
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCC--------EEEEEccCCCCeEEEEcCCC
Confidence 8999875 45556667788999999875433222222334567888887543 233443333 6788888753
Q ss_pred CeEEEEe-eCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCe
Q 010794 419 GKLLYSL-NGHREPVYSLAFSPTGEYLASG-SLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHT 493 (501)
Q Consensus 419 ~~~~~~~-~~h~~~v~~l~~spdg~~lasg-s~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~d~~ 493 (501)
.....+ ...-...+.|+++|++..|..+ +..+.|..+++........... ......+++. .+..+++-..++.
T Consensus 153 -~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 153 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 230 (316)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE
T ss_pred -CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe
Confidence 332222 2233457899999987666544 4567999999874332222221 2346778874 3556666667778
Q ss_pred EEEEE
Q 010794 494 VCVLD 498 (501)
Q Consensus 494 v~v~~ 498 (501)
|..++
T Consensus 231 V~~~~ 235 (316)
T 1ijq_A 231 IFSAN 235 (316)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87776
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.33 E-value=0.0015 Score=61.12 Aligned_cols=226 Identities=9% Similarity=0.011 Sum_probs=135.7
Q ss_pred CCeEEEEECCCce--eEeecCCCCCEEEEEecCCCCEE-EEEecCCeEEEEeCCCcceeEe-eee--ccCCeEEEecCCC
Q 010794 233 DGQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQ-FEF--HSGPTLDVDWRNN 306 (501)
Q Consensus 233 dg~i~iw~~~~~~--~~~~~~h~~~V~~l~~~~~~~~l-~s~s~D~~i~iwd~~~~~~~~~-~~~--~~~~~~~~~~~~~ 306 (501)
...|+..++.+.. ...+......+.++.|++.+..| .+-...+.|..+++........ +.. ....-++++|...
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 3577888876542 11111122345789999865555 4555678899999876632211 111 1222356777777
Q ss_pred ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeecccCCCCEEEE
Q 010794 307 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTI 384 (501)
Q Consensus 307 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i 384 (501)
..+++-...+.|.+++.........+.........+++.|.+..|..+. ..+.|...++........+...-.....+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pngl 171 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 171 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEE
Confidence 7788877888999998865443333334445678999998765554444 35778888876432221112223345788
Q ss_pred EEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010794 385 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV 464 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~ 464 (501)
+++|++. .+..+=+..+.|..+|+........+.+.......|++.. +.++.+-...+.|..++..+|+..
T Consensus 172 avd~~~~--------~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 172 TLDYEEQ--------KLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEeccCC--------EEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCce
Confidence 9988653 2444455678899999863322222232334457777753 344555556789999998777654
Q ss_pred EEE
Q 010794 465 KTY 467 (501)
Q Consensus 465 ~~~ 467 (501)
..+
T Consensus 243 ~~i 245 (318)
T 3sov_A 243 REI 245 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.33 E-value=0.0023 Score=60.28 Aligned_cols=272 Identities=8% Similarity=0.027 Sum_probs=141.8
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
..+.+|.|.+.+..++ ++.+|.|.. ....+.. .... ..........+.++.|.+ +..++ ++..
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i~~-s~DgG~t-W~~~------------~~~~~~~~~~~~~i~~~~-~~~~~-~g~~ 98 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATLME-TRDGGQT-WEPR------------TLVLDHSDYRFNSVSFQG-NEGWI-VGEP 98 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEEEE-ESSTTSS-CEEC------------CCCCSCCCCEEEEEEEET-TEEEE-EEET
T ss_pred CcEEEEEECCCCcEEE-EcCCCeEEE-eCCCCCC-CeEC------------CCCCCCCCccEEEEEecC-CeEEE-EECC
Confidence 4689999988888777 456776532 2222221 0000 000011134578888876 44444 4556
Q ss_pred CeEEEEECCCcee-Eeec---CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceE
Q 010794 234 GQARIWSTNGDLK-CTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF 309 (501)
Q Consensus 234 g~i~iw~~~~~~~-~~~~---~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (501)
+.|.. ..++... ..+. .+.+.++.+.+.+++..++++ .++.|..-.=....+..........+..+.+.+...+
T Consensus 99 g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~ 176 (327)
T 2xbg_A 99 PIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEY 176 (327)
T ss_dssp TEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCE
T ss_pred CeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcE
Confidence 65544 3333221 1111 234567888877766555544 4565433211223344433333345566666555555
Q ss_pred EEecCCCeEEEEEcCCCcceee-ecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeccc----CCCCEEEE
Q 010794 310 ATSSTDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE----HSKEIYTI 384 (501)
Q Consensus 310 ~~~~~d~~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~----~~~~v~~i 384 (501)
+..+..+.++.-.-..+..-.. -.+....+..+.+.+++.+++ ++.+|.+++++...++.-..+.. ....++.+
T Consensus 177 ~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v 255 (327)
T 2xbg_A 177 VAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDL 255 (327)
T ss_dssp EEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEE
T ss_pred EEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEE
Confidence 5555556555543211111111 123455788899999987664 45678887764222222111211 12357888
Q ss_pred EEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee---CCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 010794 385 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN---GHREPVYSLAFSPTGEYLASGSLDKSMHIWS 457 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 457 (501)
.+.+++. +++.+ .+|.| ++....|+.-..+. .+...+++|.|.+++. +++++.+|.|.-++
T Consensus 256 ~~~~~~~---------~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 256 AYRTPNE---------VWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EESSSSC---------EEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EecCCCE---------EEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 8887653 44444 46766 34444444333333 2235678899976555 55667788877665
No 281
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.29 E-value=0.00074 Score=65.27 Aligned_cols=222 Identities=10% Similarity=0.016 Sum_probs=133.0
Q ss_pred CEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec--CCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEE
Q 010794 266 DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVK 343 (501)
Q Consensus 266 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~ 343 (501)
.+|+.+. ...|+..++.......... ....+..+.| ..+..|++-...+.|+.++.........+.........++
T Consensus 88 ~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gla 165 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLA 165 (386)
T ss_dssp CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEE
T ss_pred ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEE
Confidence 3444443 3568888887665443332 2233455555 3556677777788898888876554333333334567788
Q ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCCCeE
Q 010794 344 WDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVELGKL 421 (501)
Q Consensus 344 ~~~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~~~~ 421 (501)
+.+. +.++++-...+.|.+.++........+.........+++.|.+. .+..+-... +.|..+++.....
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g--------~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG--------TIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTT--------EEEEEECSSSCEEEEEETTSCSC
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCC--------eEEEeccCCCCEEEEEeCCCCCc
Confidence 8875 45556666778898888765433222223334567888887653 234444444 7788888764332
Q ss_pred EEEeeCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 422 LYSLNGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 422 ~~~~~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
...+.......+.|+|+|++..|. +-+..+.|..+++........+. .......+++ ..+..+++-..++.|..+|
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 222222334568999998766554 44556789999986443322222 2345778888 4445566666777887776
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.25 E-value=0.0019 Score=57.93 Aligned_cols=200 Identities=10% Similarity=0.165 Sum_probs=125.4
Q ss_pred eecCCCCCEEEEEecCCCCEEEE-EecCCeEEEEeCCCcceeEeeeecc-CCeEEEecCCCceE-EEecCCCeEEEEEcC
Q 010794 248 TLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDVDWRNNVSF-ATSSTDNMIYVCKIG 324 (501)
Q Consensus 248 ~~~~h~~~V~~l~~~~~~~~l~s-~s~D~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~d~~i~~~~~~ 324 (501)
.+.+-...+.+++|+|+++.|++ ...++.|...|+. ++..+.+.... ...-.+.+..+..| ++.-.++.++++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34566678999999998776665 6668889999987 77777665432 34556666555555 454567788888876
Q ss_pred CCcce---eeec------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCC---Cceeeec-------ccCCCCEEEEE
Q 010794 325 ENRPI---KTFA------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ---DKYVHDL-------REHSKEIYTIR 385 (501)
Q Consensus 325 ~~~~~---~~~~------~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~---~~~~~~~-------~~~~~~v~~i~ 385 (501)
....+ .... ........++|+|.++.|.++.......||.+.. ...+..+ ........+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 54422 1111 1234568999999987766666655555555431 1111111 01223456778
Q ss_pred EcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe--e-CC------CCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010794 386 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL--N-GH------REPVYSLAFSPTGEYLASGSLDKSMHIW 456 (501)
Q Consensus 386 ~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~--~-~h------~~~v~~l~~spdg~~lasgs~Dg~i~iw 456 (501)
+.|... .+++.......|..+|.. ++.+..+ . +. -..-..|+|.|+|++.++ |.-+.+++|
T Consensus 180 ~dp~tg--------~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 180 FNQQKN--------TLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp EETTTT--------EEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred EcCCCC--------eEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 877643 356666778889999976 5554443 3 11 124578999999985555 777777777
Q ss_pred eC
Q 010794 457 SL 458 (501)
Q Consensus 457 ~~ 458 (501)
.-
T Consensus 250 ~~ 251 (255)
T 3qqz_A 250 TP 251 (255)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.21 E-value=0.0029 Score=61.36 Aligned_cols=221 Identities=11% Similarity=0.027 Sum_probs=131.9
Q ss_pred EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecC--CCceEEEecCCCeEEEEEcCCC----cceeeecCCCCcee
Q 010794 267 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGEN----RPIKTFAGHQGEVN 340 (501)
Q Consensus 267 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~----~~~~~~~~h~~~v~ 340 (501)
+|+.+. ...|+..++.......... ....+..++|. .+..+++-...+.|+.+++... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444443 4688888887765544332 23345556554 5666777777788888887642 22223333345677
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCC
Q 010794 341 CVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVEL 418 (501)
Q Consensus 341 ~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~ 418 (501)
.+++.+ .++++++-...+.|.+.++........+.........|++.|.+. .+..+- +..+.|...++..
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g--------~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG--------FMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTT--------EEEEEECSSSCCEEEEETTS
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccC--------eEEEEeCCCCCEEEEEeCCC
Confidence 899987 456666777788999999876544333333344567888888543 233332 2346788888764
Q ss_pred CeEEEEeeCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeE
Q 010794 419 GKLLYSLNGHREPVYSLAFSPTGEYLASG-SLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTV 494 (501)
Q Consensus 419 ~~~~~~~~~h~~~v~~l~~spdg~~lasg-s~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~d~~v 494 (501)
......+...-...+.|+++|++..|..+ +..+.|..+++........... -.....++.. .+..+.+-..++.|
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence 33222233333567899999887766655 4567899999865433222222 2346677762 33455555667777
Q ss_pred EEEE
Q 010794 495 CVLD 498 (501)
Q Consensus 495 ~v~~ 498 (501)
..+|
T Consensus 314 ~~~~ 317 (400)
T 3p5b_L 314 FSAN 317 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7766
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.18 E-value=0.0034 Score=61.54 Aligned_cols=233 Identities=9% Similarity=0.044 Sum_probs=128.6
Q ss_pred CeEEEEECCC--CCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecC---Ce-EEEEeCCCcce
Q 010794 214 DVTTLDWNGE--GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KT-AIVWDVKTEEW 287 (501)
Q Consensus 214 ~V~~~~~s~~--~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D---~~-i~iwd~~~~~~ 287 (501)
....++|.++ ...|+.+...+.|+.++........+........+++|+++|+.+++.... .. +...+.. +.+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-SGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-GTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC-CCe
Confidence 4568999984 344555544488999998655555555445567899999999944443321 22 3333322 221
Q ss_pred e--EeeeeccCCeEEEec--CCCceEEEecCCCeEEEEEcCCCcceeee-c-CCCCceeEEEEcCCCC-EEEEEeCCCeE
Q 010794 288 K--QQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTF-A-GHQGEVNCVKWDPTGS-LLASCSDDVTA 360 (501)
Q Consensus 288 ~--~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~-~h~~~v~~v~~~~~~~-~l~s~s~Dg~i 360 (501)
. ..+. .......+.+ .....+++...++.|+.++...+.....+ . +.......++|+|+++ ++++-...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1 1111 1111222223 23445556666778888887655432222 1 1122334799999998 55666677889
Q ss_pred EEEeCC--CCcee--eecccC---------------CCCEEEEEE---------cCCCCCCCCCCCcEEEEEEeCCCeEE
Q 010794 361 KIWNMK--QDKYV--HDLREH---------------SKEIYTIRW---------SPTGSGTNNPNQQLILASASFDSTVK 412 (501)
Q Consensus 361 ~iwd~~--~~~~~--~~~~~~---------------~~~v~~i~~---------~p~g~~~~~~~~~~~l~sgs~dg~i~ 412 (501)
+.+++. ++... ..+.+. -.....+++ .+.+. +.++-...+.|+
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~---------lyvaD~~n~~I~ 368 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD---------FYFCDRDSHTVR 368 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE---------EEEEETTTTEEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc---------EEEEECCCCEEE
Confidence 998765 22211 111110 112445666 34332 445555677888
Q ss_pred EEeCCCCeEEEEeeCC------------------CCCeEEEEEC-CCCCEEEEEeCCCcEEEEeCC
Q 010794 413 LWDVELGKLLYSLNGH------------------REPVYSLAFS-PTGEYLASGSLDKSMHIWSLK 459 (501)
Q Consensus 413 iwd~~~~~~~~~~~~h------------------~~~v~~l~~s-pdg~~lasgs~Dg~i~iw~~~ 459 (501)
.++. +|... ++.+. -..-..|+++ ++|.++++=...++|+.++++
T Consensus 369 ~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 369 VLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 8885 45433 33221 1225678888 566666666666778777653
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.14 E-value=0.0038 Score=65.87 Aligned_cols=226 Identities=12% Similarity=0.075 Sum_probs=135.5
Q ss_pred CCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCc----ceeEeee--eccCCeEEEecCC
Q 010794 233 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTE----EWKQQFE--FHSGPTLDVDWRN 305 (501)
Q Consensus 233 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~----~~~~~~~--~~~~~~~~~~~~~ 305 (501)
...|+..++.+.....+......+.+|+|++....|+ +-...+.|+.+++... .....+. .....-++++|..
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence 3567777776544444444455678999998655554 5555688999988653 2222222 1222346788888
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeecccCCCCEEE
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DD-VTAKIWNMKQDKYVHDLREHSKEIYT 383 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~D-g~i~iwd~~~~~~~~~~~~~~~~v~~ 383 (501)
...|++-...+.|.+.++........+.........|+++|.+.+|+... .. +.|...++........+.........
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~G 562 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 562 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceE
Confidence 88888888889999999876544333333445688999999755554443 33 67888888654433323333346678
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 384 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
|++.+.+. .+..+=...+.|..+++........+.. ......+|++..+ .++++-...+.|...+..+|
T Consensus 563 LavD~~~~--------~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 563 ITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTC
T ss_pred EEEecCCC--------eEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCC
Confidence 88886543 2333444567899998864333222322 2223456776433 34445556678888887777
Q ss_pred eeEEEE
Q 010794 462 KIVKTY 467 (501)
Q Consensus 462 ~~~~~~ 467 (501)
+.+..+
T Consensus 634 ~~~~~l 639 (791)
T 3m0c_C 634 SDVNLL 639 (791)
T ss_dssp CCCEEE
T ss_pred cceEEe
Confidence 554444
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.0054 Score=60.52 Aligned_cols=240 Identities=12% Similarity=0.150 Sum_probs=140.0
Q ss_pred CeEEEEECCC--CCEEEEEeCCCeEEEEECCCceeEeecCC----CCCEEEEEe-------cCCCCEEEEEecCC-e---
Q 010794 214 DVTTLDWNGE--GTLLATGSYDGQARIWSTNGDLKCTLSKH----KGPIFSLKW-------NKKGDYLLTGSCDK-T--- 276 (501)
Q Consensus 214 ~V~~~~~s~~--~~~l~sg~~dg~i~iw~~~~~~~~~~~~h----~~~V~~l~~-------~~~~~~l~s~s~D~-~--- 276 (501)
....|+|.|. ++++++-...+.|++.|.....+..+..- ......|+| ++++.+|+.+...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 44444444456788888877655544322 224789999 99999777665543 2
Q ss_pred ---EEEEeCCC-cceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcC-CCCEE
Q 010794 277 ---AIVWDVKT-EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLL 351 (501)
Q Consensus 277 ---i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l 351 (501)
|.+.+... +.+.. ... + ..+..+. ....++++| ++.++
T Consensus 220 ~~~V~~i~r~~~G~~~~--------------~~~---------~----------~~v~~~~----~p~giavdp~~g~LY 262 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDD--------------RSD---------I----------QLIAAYK----QCNGATIHPINGELY 262 (496)
T ss_dssp EEEEEEEECCTTSCCST--------------TSC---------E----------EEEEEES----CCCCEEECTTTCCEE
T ss_pred CceEEEEecCCCCceee--------------ccc---------c----------eeeccCC----CceEEEEcCCCCeEE
Confidence 33433211 11100 000 0 0011111 234678899 56667
Q ss_pred EEEeCCCeEEEEeCC-------CCce-----------eeec-c-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeE
Q 010794 352 ASCSDDVTAKIWNMK-------QDKY-----------VHDL-R-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 411 (501)
Q Consensus 352 ~s~s~Dg~i~iwd~~-------~~~~-----------~~~~-~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i 411 (501)
++-..++.|..+|+. ++.. ...+ . ......+.++|+|+|. .+.++=+....|
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~--------~lYvaD~~~h~I 334 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK--------YAYFGVINNHYF 334 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS--------EEEEEETTTTEE
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC--------EEEEEeCCCCEE
Confidence 777788889999987 4432 1111 1 1223457899999885 234444567788
Q ss_pred EEEeC--CCCeEE--EEeeCC---C------------CCeE-EEEEC-------CCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010794 412 KLWDV--ELGKLL--YSLNGH---R------------EPVY-SLAFS-------PTGEYLASGSLDKSMHIWSLKEGKIV 464 (501)
Q Consensus 412 ~iwd~--~~~~~~--~~~~~h---~------------~~v~-~l~~s-------pdg~~lasgs~Dg~i~iw~~~~~~~~ 464 (501)
+.++. ..+... ..+-+. . ..-. .++.. ++|.++++=....+|+.++ .+|.+
T Consensus 335 ~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v- 412 (496)
T 3kya_A 335 MRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV- 412 (496)
T ss_dssp EEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-
T ss_pred EEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCE-
Confidence 88554 333320 122111 0 1233 45554 5677777777788999998 46643
Q ss_pred EEEecC-------------------------CCEEEEEECCC-CCEEEEEECCCeEEEEEee
Q 010794 465 KTYTGN-------------------------GGIFEVCWNKE-GDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 465 ~~~~~~-------------------------~~i~~~~ws~~-g~~la~~~~d~~v~v~~~~ 500 (501)
.++.+. .....|+++++ |+++++=..+..|+.+++.
T Consensus 413 ~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 413 STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 343221 12578999997 8777777889999988764
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.06 E-value=0.0026 Score=59.43 Aligned_cols=192 Identities=17% Similarity=0.258 Sum_probs=121.8
Q ss_pred CCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCc---------eEEEecC--CCeEEEEEcC-CCcceee
Q 010794 264 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV---------SFATSST--DNMIYVCKIG-ENRPIKT 331 (501)
Q Consensus 264 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--d~~i~~~~~~-~~~~~~~ 331 (501)
....++.....+-+.+||+ .++.++.+.. +.+..++..+.. .+++.-. ++.|.++++. ...++..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456776777788999999 6776666543 445555554332 2344445 6899999884 2233444
Q ss_pred ecC------CC-CceeEEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCceeeecccCCCCEEEEEEcCCCCCC
Q 010794 332 FAG------HQ-GEVNCVKW--DPT-GS-LLASCSDDVTAKIWNMK-------QDKYVHDLREHSKEIYTIRWSPTGSGT 393 (501)
Q Consensus 332 ~~~------h~-~~v~~v~~--~~~-~~-~l~s~s~Dg~i~iwd~~-------~~~~~~~~~~~~~~v~~i~~~p~g~~~ 393 (501)
+.. .. ..+..+++ +|. ++ +++....+|.+..|++. +.+.+++|... ..+..+...+...
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g-- 192 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYG-- 192 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTT--
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCC--
Confidence 421 11 45666777 774 44 57788888999999873 33455666543 4566666666543
Q ss_pred CCCCCcEEEEEEeCCCeEEEEeCC-----CCeEEEEee-CC-CCCeEEEEE--CCCCC-EEEEEe-CCCcEEEEeCC-CC
Q 010794 394 NNPNQQLILASASFDSTVKLWDVE-----LGKLLYSLN-GH-REPVYSLAF--SPTGE-YLASGS-LDKSMHIWSLK-EG 461 (501)
Q Consensus 394 ~~~~~~~~l~sgs~dg~i~iwd~~-----~~~~~~~~~-~h-~~~v~~l~~--spdg~-~lasgs-~Dg~i~iw~~~-~~ 461 (501)
.|..+-.+.-|..++.+ +++.+..+. ++ ...+..|++ .++++ ||++++ .+.+..+|+.. +.
T Consensus 193 -------~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~ 265 (355)
T 3amr_A 193 -------RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN 265 (355)
T ss_dssp -------EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC
T ss_pred -------eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC
Confidence 56778888666666654 345665542 22 236788877 56666 666555 67899999997 67
Q ss_pred eeEEEEe
Q 010794 462 KIVKTYT 468 (501)
Q Consensus 462 ~~~~~~~ 468 (501)
+.+..+.
T Consensus 266 ~~vg~f~ 272 (355)
T 3amr_A 266 KYVADFR 272 (355)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 7777773
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.02 E-value=0.0038 Score=59.40 Aligned_cols=59 Identities=20% Similarity=0.272 Sum_probs=39.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCe-------eEEEEecCCCEEEEEECCCCCEEEEEEC
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK-------IVKTYTGNGGIFEVCWNKEGDKIAACFA 490 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~-------~~~~~~~~~~i~~~~ws~~g~~la~~~~ 490 (501)
....++| .+|.++++.-..+.|...++.... ....+.....+.++++.|||..+++...
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 4567888 467776666667788887775432 1122233457899999999987776643
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.99 E-value=0.0078 Score=56.25 Aligned_cols=216 Identities=8% Similarity=-0.005 Sum_probs=124.3
Q ss_pred CCeEEEEeCCCcc--eeEeeeeccCCeEEEecC--CCceEEEecCCCeEEEEEcCCCcce-eeecCCCCceeEEEEcCC-
Q 010794 274 DKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPI-KTFAGHQGEVNCVKWDPT- 347 (501)
Q Consensus 274 D~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~- 347 (501)
...|+..++.... ....+. .......++|. .+..+.+-...+.|+.++....... ..+...-.....+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4678888887653 111111 12234456664 4566777777888888887655321 122222245678889874
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCCCeEEEEee
Q 010794 348 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVELGKLLYSLN 426 (501)
Q Consensus 348 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~~~~~~~~~ 426 (501)
+.++++-...+.|.++++........+.........+++.|.+. .+..+- +..+.|...++........+.
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g--------~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG--------FMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGT--------EEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCC--------EEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 55666666778999999875432222223334567888887543 133332 235778888776322211222
Q ss_pred CCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 427 GHREPVYSLAFSPTGEYLAS-GSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 427 ~h~~~v~~l~~spdg~~las-gs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
..-..-+.|+|+|++..|.. =+..+.|..+++.......... .......+++.. +..+.+-..++.|..++.
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 22345689999997665554 4567889999986433222222 233467777743 334455556677777653
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.97 E-value=0.0025 Score=59.56 Aligned_cols=181 Identities=14% Similarity=0.251 Sum_probs=118.7
Q ss_pred eEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCC----CC---E-EEEEeC--CCeEEEEeCC--CCceeeecc
Q 010794 308 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT----GS---L-LASCSD--DVTAKIWNMK--QDKYVHDLR 375 (501)
Q Consensus 308 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~----~~---~-l~s~s~--Dg~i~iwd~~--~~~~~~~~~ 375 (501)
.++.....+-+.++++ .++.++.+.. +.++.+..-|. |+ + +++... +++|++|++. ++ .+..+.
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~ 117 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMT 117 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECS
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeecc
Confidence 3555566778999999 7777777653 56777777663 22 2 444444 6899999763 33 243332
Q ss_pred c------CC-CCEEEEEE--cCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-------CCeEEEEeeCCCCCeEEEEECC
Q 010794 376 E------HS-KEIYTIRW--SPTGSGTNNPNQQLILASASFDSTVKLWDVE-------LGKLLYSLNGHREPVYSLAFSP 439 (501)
Q Consensus 376 ~------~~-~~v~~i~~--~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~sp 439 (501)
. .. ..++.+++ +|.+ +..+++....+|.+..|++. +.+.+.++.- ...+..++..+
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~-------g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd 189 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKT-------GKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD 189 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTT-------CCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET
T ss_pred ccccCcCCCCCCeeEEEEEecCCC-------CcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC
Confidence 1 11 45566666 5532 23467777788999999872 3355666663 35688899999
Q ss_pred CCCEEEEEeCCCcEEEEeCC-----CCeeEEEEecC---CCEEEEEE--CCCCC-EEEEEE-CCCeEEEEEee
Q 010794 440 TGEYLASGSLDKSMHIWSLK-----EGKIVKTYTGN---GGIFEVCW--NKEGD-KIAACF-ANHTVCVLDFR 500 (501)
Q Consensus 440 dg~~lasgs~Dg~i~iw~~~-----~~~~~~~~~~~---~~i~~~~w--s~~g~-~la~~~-~d~~v~v~~~~ 500 (501)
....|..+-.+.-|..++.+ +++++..+... ..+-.++. .++|+ +|++.+ .+.++.|||..
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 88999999998777777755 35566555332 34677776 67776 555555 67799999863
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.97 E-value=0.0008 Score=62.27 Aligned_cols=158 Identities=13% Similarity=0.120 Sum_probs=107.4
Q ss_pred cCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeee-ccc----C--CCCEEEEEE---cCCCCCCCCCCCcEE
Q 010794 333 AGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHD-LRE----H--SKEIYTIRW---SPTGSGTNNPNQQLI 401 (501)
Q Consensus 333 ~~h~~~v~~v~~~~~~~~l~s~s-~Dg~i~iwd~~~~~~~~~-~~~----~--~~~v~~i~~---~p~g~~~~~~~~~~~ 401 (501)
.+......+++|++....|..++ ..++|..|+...+..... +.. . ...+..|.| .|.+. +
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr---------L 79 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR---------L 79 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE---------E
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc---------E
Confidence 33445567899988655555555 789999999875543322 221 0 113578888 57653 4
Q ss_pred EEEEe-------------CCCeEEEEeCC---CCeEEEEee--CC-----------CCCeEEEEECCCCCEEEEEeCC-C
Q 010794 402 LASAS-------------FDSTVKLWDVE---LGKLLYSLN--GH-----------REPVYSLAFSPTGEYLASGSLD-K 451 (501)
Q Consensus 402 l~sgs-------------~dg~i~iwd~~---~~~~~~~~~--~h-----------~~~v~~l~~spdg~~lasgs~D-g 451 (501)
+++.. .+..|..+|+. +++.++... .. ....++++..++|+..++++.- +
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~ 159 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP 159 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC
Confidence 44333 26789999999 787766543 11 1248899999999999999988 8
Q ss_pred cEEEEeCCCCeeEEEEe-c------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 452 SMHIWSLKEGKIVKTYT-G------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 452 ~i~iw~~~~~~~~~~~~-~------~~~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.|...+.... .+..+. . ..+.+.++++|+|+.|++....+.|..+|++
T Consensus 160 ~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 160 AIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 8888876543 332221 1 1246799999999988888779999998864
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.92 E-value=0.00012 Score=76.49 Aligned_cols=227 Identities=11% Similarity=0.056 Sum_probs=128.6
Q ss_pred CCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEE-ecCCeEEEEeCCC----cceeEeeee--ccCCeEEEecCC
Q 010794 233 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKT----EEWKQQFEF--HSGPTLDVDWRN 305 (501)
Q Consensus 233 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~-s~D~~i~iwd~~~----~~~~~~~~~--~~~~~~~~~~~~ 305 (501)
.+.|+..++.+.....+......+.+|+|++.+..|+.+ ...+.|+.+++.+ ......+.. ....-+.++|..
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 356777776654333333233445788999877766655 4467899999875 221111111 111234556666
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEE-EEEeCC-CeEEEEeCCCCceeeecccCCCCEEE
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDD-VTAKIWNMKQDKYVHDLREHSKEIYT 383 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~D-g~i~iwd~~~~~~~~~~~~~~~~v~~ 383 (501)
...+++-...+.|.++++........+.........|+++|.+.+| ++-... +.|..+++........+.........
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 6777777777889888876554333333223456788999865544 443222 67777776533221111112233456
Q ss_pred EEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 384 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 384 i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
|+|+|++. .+.++-+..+.|..+++........+. ........|++..+ .++++....+.|..++..+|
T Consensus 545 lavd~~~~--------~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 545 ITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp EEECTTTC--------CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE
T ss_pred EEEeccCC--------EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC
Confidence 88887653 244455667889999986432222221 11122345566544 44455566789999998888
Q ss_pred eeEEEEe
Q 010794 462 KIVKTYT 468 (501)
Q Consensus 462 ~~~~~~~ 468 (501)
+.+..+.
T Consensus 616 ~~~~~i~ 622 (699)
T 1n7d_A 616 SDVNLLA 622 (699)
T ss_dssp EEEECCC
T ss_pred CceEEee
Confidence 8776664
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.017 Score=57.05 Aligned_cols=113 Identities=8% Similarity=0.069 Sum_probs=65.2
Q ss_pred eeEEEECCC-C-CEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEE-------CCCCCE
Q 010794 156 VCACAWSPA-G-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-------NGEGTL 226 (501)
Q Consensus 156 V~~~~~sp~-~-~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-------s~~~~~ 226 (501)
...|+|+|. + +++++-...+.|++.|+.++. +..+.. ...........++| +++|.+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-----------v~~l~~---~~~~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-----------LSSPLN---INTIPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-----------EEEEEC---CTTSSCSBEEEEEECCCBTTTBCTTCE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-----------EEEEEc---cCccccCCCcEEEEeecccccCCCCCE
Confidence 568999993 4 444454445678888876542 111111 11112235788999 999997
Q ss_pred EEEEeCCC-------eEEEEECCC--cee-----EeecCCCCCEEEEEecCCC-CEEEEEecCCeEEEEeCC
Q 010794 227 LATGSYDG-------QARIWSTNG--DLK-----CTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVK 283 (501)
Q Consensus 227 l~sg~~dg-------~i~iw~~~~--~~~-----~~~~~h~~~V~~l~~~~~~-~~l~s~s~D~~i~iwd~~ 283 (501)
|+.+...+ .|.+.+... ... ..+..... ..+++++|++ ..+++-..++.|..+|+.
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~-p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQ-CNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESC-CCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCC-ceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 77666554 255554332 221 12222122 2567889954 445566677889999987
No 294
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.88 E-value=0.0062 Score=54.62 Aligned_cols=190 Identities=10% Similarity=0.098 Sum_probs=115.6
Q ss_pred CeEEEecC--CCceEEEecCCCeEEEEEcCCCcceeeec-CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---
Q 010794 297 PTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--- 370 (501)
Q Consensus 297 ~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~--- 370 (501)
.+..+.|. .+..+++...++.|+..+.. ++.++.+. +-....-.|++.+++.++++.-.++.+.++++.....
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 34555554 34566667778889999987 66665553 2224677899999998877766778888888765432
Q ss_pred eeecc------cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC-eEEEEeC-CCCeEEEEee-------CCCCCeEEE
Q 010794 371 VHDLR------EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-TVKLWDV-ELGKLLYSLN-------GHREPVYSL 435 (501)
Q Consensus 371 ~~~~~------~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg-~i~iwd~-~~~~~~~~~~-------~h~~~v~~l 435 (501)
+.... ........++|+|.+. . ++++.-.+. .|.-|+- .....+..+. .+...+.+|
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~-------~-L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDH-------T-FWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTT-------E-EEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred eeeeccccccccccCCcceEEEeCCCC-------E-EEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 11111 1233457899988764 2 333333333 4555541 1111111121 123356889
Q ss_pred EECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEEecC----------CCEEEEEECCCCCEEEEEECCCeEEEE
Q 010794 436 AFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTYTGN----------GGIFEVCWNKEGDKIAACFANHTVCVL 497 (501)
Q Consensus 436 ~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~~~~----------~~i~~~~ws~~g~~la~~~~d~~v~v~ 497 (501)
+|+|.. .+++.......|.++|.. |+++..+.-. ...-.++|.++|+..+++-. ..+++|
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f 249 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRF 249 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEE
Confidence 999964 556666677889999965 6665555332 25689999999996666544 455555
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.88 E-value=0.019 Score=60.61 Aligned_cols=221 Identities=10% Similarity=0.025 Sum_probs=128.5
Q ss_pred EEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEec--CCCceEEEecCCCeEEEEEcCCC----cceeeecCCCCcee
Q 010794 267 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGEN----RPIKTFAGHQGEVN 340 (501)
Q Consensus 267 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~----~~~~~~~~h~~~v~ 340 (501)
+|+.+ ....|+..++....+..... ....+..+++ ..+..|++-...+.|+.+++... .....+........
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccc-cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 44433 34567888877665443332 2233444444 45667777777888888887642 22233333345677
Q ss_pred EEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCC
Q 010794 341 CVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVEL 418 (501)
Q Consensus 341 ~v~~~~~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~ 418 (501)
.|++.+.+ +++++-...+.|.+.++........+.........|++.|... .++.+- +..+.|...++..
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g--------~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG--------FMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT--------EEEEEECSSSCEEEEEETTS
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC--------CEEEecCCCCCeEEEEecCC
Confidence 89998776 5566667788999999875543332333344578889888643 133332 2336788888864
Q ss_pred CeEEEEeeCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeE
Q 010794 419 GKLLYSLNGHREPVYSLAFSPTGEYLASG-SLDKSMHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTV 494 (501)
Q Consensus 419 ~~~~~~~~~h~~~v~~l~~spdg~~lasg-s~Dg~i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~d~~v 494 (501)
......+.......+.|++++.+..|..+ ...+.|..+++............ ...++|+...+ .++++-..++.|
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I 625 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAI 625 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEE
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEE
Confidence 44333333334567899999877666555 45678999998654433333321 23566666322 333344456666
Q ss_pred EEEE
Q 010794 495 CVLD 498 (501)
Q Consensus 495 ~v~~ 498 (501)
.++|
T Consensus 626 ~~~d 629 (791)
T 3m0c_C 626 FSAN 629 (791)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6655
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=0.00075 Score=66.23 Aligned_cols=152 Identities=11% Similarity=0.204 Sum_probs=94.4
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC----eEE
Q 010794 338 EVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS----TVK 412 (501)
Q Consensus 338 ~v~~v~~~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg----~i~ 412 (501)
....|+++| ++..|..+...+.|+.+|+..+.... +.........++|++++. .++++...++ .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~--------~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEAD--------SMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSS--------EEEEEECCSCTTSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCC--------EEEEEeCCCCcccceEE
Confidence 456889998 34444444444889999987665433 333445678899998875 2344433222 233
Q ss_pred EEeCCCCeEE--EEeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEE-
Q 010794 413 LWDVELGKLL--YSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIA- 486 (501)
Q Consensus 413 iwd~~~~~~~--~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la- 486 (501)
+++.. +... ..+.. ......++++| +|.++++-...+.|..|+..++....... .......++|+|+|++|.
T Consensus 209 ~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 209 ILTRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp EEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred EEeCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 33322 2111 12221 22357789999 67777776678899999998776533222 223478999999999554
Q ss_pred EEECCCeEEEEEee
Q 010794 487 ACFANHTVCVLDFR 500 (501)
Q Consensus 487 ~~~~d~~v~v~~~~ 500 (501)
+-..++.|.+++..
T Consensus 287 ~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 287 VVVNQHYILRSDYD 300 (430)
T ss_dssp EETTTTEEEEEEEE
T ss_pred EECCCCEEEEEeCC
Confidence 55667889888753
No 297
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.79 E-value=0.075 Score=58.55 Aligned_cols=321 Identities=14% Similarity=0.151 Sum_probs=163.1
Q ss_pred ccceeEEEECCC------CCEEEEEEC-CCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCC
Q 010794 153 TSEVCACAWSPA------GSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 225 (501)
Q Consensus 153 ~~~V~~~~~sp~------~~~l~sgs~-D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~ 225 (501)
...|.|+++.|. +.+++.|.. |++|+|+.+.+... .....+... .....|.-+.+ ....
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~-----------~~~~~L~~~--~~p~si~l~~~-~~~~ 618 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL-----------LHKEMLGGE--IIPRSILMTTF-ESSH 618 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE-----------EEEEECCSS--CCEEEEEEEEE-TTEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe-----------EEEEECCCC--CCCcEEEEEEe-CCCc
Confidence 357999999874 368999996 99999999874221 111111110 01122333444 2346
Q ss_pred EEEEEeCCCeEEEEECC---Ccee---EeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeE
Q 010794 226 LLATGSYDGQARIWSTN---GDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 299 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~---~~~~---~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (501)
+|..|-.||.+.-+..+ +.+. ..+-| +.+|.=..+...+..-+-+..++...++--+. .+. .......++.
T Consensus 619 ~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~-~l~-~s~l~~~~v~ 695 (1158)
T 3ei3_A 619 YLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNH-KLV-FSNVNLKEVN 695 (1158)
T ss_dssp EEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSS-SEE-EEEBSSSCCC
T ss_pred EEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCC-ceE-EeccChHHhc
Confidence 88999999988666543 2221 12223 34554444444444333333355555554332 211 1111111221
Q ss_pred EE-ecCC---CceEEEecCCCeEEEEEcCCCc--ceeeecCCCCceeEEEEcCCCCEEEEEeCC----------------
Q 010794 300 DV-DWRN---NVSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCSDD---------------- 357 (501)
Q Consensus 300 ~~-~~~~---~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D---------------- 357 (501)
.+ .|.. ...++... ++.+++..+..-. +++.+. -...+..++++|..+.++.+..+
T Consensus 696 ~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 773 (1158)
T 3ei3_A 696 YMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPS 773 (1158)
T ss_dssp EEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCC
T ss_pred eEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhh
Confidence 11 2221 23344333 4458887765432 222221 12456778888877765443211
Q ss_pred ---------------------------------CeEEEEeCCCCceeeecccC-CCCEEEEEEcCCCCCCCCCCCcEEEE
Q 010794 358 ---------------------------------VTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILA 403 (501)
Q Consensus 358 ---------------------------------g~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~p~g~~~~~~~~~~~l~ 403 (501)
+.|++.|..+.+.+..+.-. ...+.+++...-.. ....+|+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~-----~~~~~lv 848 (1158)
T 3ei3_A 774 ASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGK-----DPNTYFI 848 (1158)
T ss_dssp HHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTT-----CCCCEEE
T ss_pred hhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEcc-----CCCEEEE
Confidence 23566666655554433221 22344443222111 0112555
Q ss_pred EEe----------CCCeEEEEeCCCCeEEEEe-eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE-EEecCC
Q 010794 404 SAS----------FDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK-TYTGNG 471 (501)
Q Consensus 404 sgs----------~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~-~~~~~~ 471 (501)
.|. ..|.|.+|++..++..... ....++|++|+-- +|+ |++|- .+.|++|++...+.+. ......
T Consensus 849 VGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~~~~~~~~ 925 (1158)
T 3ei3_A 849 VGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKELRTECNHYN 925 (1158)
T ss_dssp EEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEEEEEEECC
T ss_pred EEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCE-EEEEc-CCEEEEEECCCCceEEEEeeccc
Confidence 554 3578999998654432221 2246789988632 354 44433 4789999998765443 111122
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 472 GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 472 ~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
.+..+.....|+++++|..-.+|.++.++
T Consensus 926 ~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 926 NIMALYLKTKGDFILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp CSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred cEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence 22233333457889999888888777655
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.74 E-value=0.019 Score=54.46 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=41.8
Q ss_pred CCeEEEEEC-------CCCCEEEEEeCCCcEEEEeCCC-CeeE--EEEe-c-CCCEEEEEECCCCCEEEEEE
Q 010794 430 EPVYSLAFS-------PTGEYLASGSLDKSMHIWSLKE-GKIV--KTYT-G-NGGIFEVCWNKEGDKIAACF 489 (501)
Q Consensus 430 ~~v~~l~~s-------pdg~~lasgs~Dg~i~iw~~~~-~~~~--~~~~-~-~~~i~~~~ws~~g~~la~~~ 489 (501)
.....++|. .+|.++++.-..+.|...++.. ++.. ..+- . ...+..+++.|||.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 456788884 5677777766778899888875 3332 2232 2 34689999999998777664
No 299
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.68 E-value=0.039 Score=52.31 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=44.9
Q ss_pred CCeEEEEECC-------CCCEEEEEeCCCcEEEEeCCCCeeEEE--E-ec-CCCEEEEEECCCCCEEEEEE-CCCeEE
Q 010794 430 EPVYSLAFSP-------TGEYLASGSLDKSMHIWSLKEGKIVKT--Y-TG-NGGIFEVCWNKEGDKIAACF-ANHTVC 495 (501)
Q Consensus 430 ~~v~~l~~sp-------dg~~lasgs~Dg~i~iw~~~~~~~~~~--~-~~-~~~i~~~~ws~~g~~la~~~-~d~~v~ 495 (501)
..+..++|.+ +|.++++.-..+.|...++..++.+.. + .. ...+..+++.|||.+.++.. .+|.|.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ 348 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELL 348 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEE
Confidence 3567788864 467777766778888888877654432 2 12 34689999999999766544 456553
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.66 E-value=0.073 Score=54.69 Aligned_cols=221 Identities=10% Similarity=0.012 Sum_probs=136.0
Q ss_pred CCCeEEEEECCCcee-Eeec-CCCCCEEEEEecCCCCEEE-EEecCCeEEEEeCCCcceeEeeeec--cCCeEEEecCCC
Q 010794 232 YDGQARIWSTNGDLK-CTLS-KHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFH--SGPTLDVDWRNN 306 (501)
Q Consensus 232 ~dg~i~iw~~~~~~~-~~~~-~h~~~V~~l~~~~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~ 306 (501)
....|+..++.+... ..+. ..-..+.+|+|++.+..|+ +-..++.|..+++........+... ...-++++|...
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 456788888765322 2221 1234578999999776665 5556789999998765443333222 223467788888
Q ss_pred ceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeecccCCCCEEEE
Q 010794 307 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTI 384 (501)
Q Consensus 307 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i 384 (501)
..+++-...+.|.+.++........+...-.....|++.|....|.... ..+.|...++...... .+.........|
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceE
Confidence 8888888889999999865543323323345678999998655544443 2567777777644322 222234456788
Q ss_pred EEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010794 385 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 463 (501)
Q Consensus 385 ~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 463 (501)
++++.+. .+..+=...+.|..+|+..... ..+.........|++.. +.++++-...+.|...|..+|+.
T Consensus 172 alD~~~~--------~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 172 TIDYAKR--------RLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEETTTT--------EEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEccccC--------EEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 8888653 2344445677899999864332 22222233456787765 44445555578899999777653
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.59 E-value=0.00047 Score=72.10 Aligned_cols=215 Identities=10% Similarity=-0.006 Sum_probs=114.4
Q ss_pred CCeEEEEeCCCcceeEeeeeccCCeEEEec--CCCceEEEecCCCeEEEEEcCC----CcceeeecCCCCceeEEEEcCC
Q 010794 274 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGE----NRPIKTFAGHQGEVNCVKWDPT 347 (501)
Q Consensus 274 D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~----~~~~~~~~~h~~~v~~v~~~~~ 347 (501)
.+.|+..++.+..+...+... ..+..+.| ..+..|++-...+.|+.+++.. ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 457888888776554333221 22334444 3455666666677888888764 2222222212223556888754
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC-CCeEEEEeCCCCeEEEEe
Q 010794 348 -GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-DSTVKLWDVELGKLLYSL 425 (501)
Q Consensus 348 -~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~-dg~i~iwd~~~~~~~~~~ 425 (501)
++++++-...+.|.++++........+.........|++.|.+. . ++.+-.. .+.|..+++........+
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g-------~-ly~td~~~~~~I~~~~~dG~~~~~l~ 535 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHG-------F-MYWTDWGTPAKIKKGGLNGVDIYSLV 535 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSS-------C-CEECCCSSSCCEEBCCSSSCCCCEES
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCC-------c-EEEcccCCCCeEEEEeCCCCCeeEEE
Confidence 55666666778899999875543322222223345667766532 1 2233222 367777766532221112
Q ss_pred eCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010794 426 NGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 426 ~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~d~~v~v~~ 498 (501)
.......+.|+|+|++..| ++-+..+.|.++++........+.. ......+++..+ .++++....+.|.+++
T Consensus 536 ~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 536 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 611 (699)
T ss_dssp CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence 2222345789999986544 5555678899999864332222221 122345555443 3444556677887776
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.57 E-value=0.057 Score=51.14 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=57.9
Q ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC---CCEEEE
Q 010794 153 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLAT 229 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~---~~~l~s 229 (501)
-.....++|.|+|+++++ ..+|.|++++ ++.. ..+.... ...........|+|+|+ +.+|+.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-----------~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-----------STYAELS-VYHRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-----------EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-----------cEeecce-EeecCCCCceeEEECCCCCCCCEEEE
Confidence 344679999999996655 5669998887 3321 0111111 11111345789999998 455544
Q ss_pred EeC-C-----CeEEEEECCCc----e--e-Eeec-----CCCCCEEEEEecCCCCEEEEE
Q 010794 230 GSY-D-----GQARIWSTNGD----L--K-CTLS-----KHKGPIFSLKWNKKGDYLLTG 271 (501)
Q Consensus 230 g~~-d-----g~i~iw~~~~~----~--~-~~~~-----~h~~~V~~l~~~~~~~~l~s~ 271 (501)
+.. . +.|..++..+. . . ..+. .|. ...|+|.|+|...++.
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSCEEEEC
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcC--CceEEECCCCCEEEEE
Confidence 433 2 56666765532 1 1 1122 122 2579999999755553
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.43 E-value=0.021 Score=52.83 Aligned_cols=188 Identities=11% Similarity=0.159 Sum_probs=111.2
Q ss_pred EEecCC--CceEEEecCCCeEEEEEcCCCcceee-ecC----CC--CceeEEEE---cCCCCEEEEEe------------
Q 010794 300 DVDWRN--NVSFATSSTDNMIYVCKIGENRPIKT-FAG----HQ--GEVNCVKW---DPTGSLLASCS------------ 355 (501)
Q Consensus 300 ~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~-~~~----h~--~~v~~v~~---~~~~~~l~s~s------------ 355 (501)
++.|.. ...+++.-..+.|..|+...+..... +.+ .. ..+..|.| .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 445532 33445555789999998865433222 222 11 13579999 68888877543
Q ss_pred -CCCeEEEEeCC---CCceeeecc--c-----------CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-CeEEEEeCC
Q 010794 356 -DDVTAKIWNMK---QDKYVHDLR--E-----------HSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVE 417 (501)
Q Consensus 356 -~Dg~i~iwd~~---~~~~~~~~~--~-----------~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~ 417 (501)
.+..+..||+. +++.+.... . .......++..++|. ..++++.- +.|...+..
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn---------aYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN---------SYVAFALGMPAIARVSAD 167 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC---------EEEEEEESSCEEEEECTT
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC---------EEEeCCCCCCeEEEEeCC
Confidence 26779999998 676653322 1 112467888888886 45667777 777777765
Q ss_pred CCeEE-EEee----CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEEe-cC----CCEEE-EEECCCCCE
Q 010794 418 LGKLL-YSLN----GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTYT-GN----GGIFE-VCWNKEGDK 484 (501)
Q Consensus 418 ~~~~~-~~~~----~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~~-~~----~~i~~-~~ws~~g~~ 484 (501)
..... +-+. ......+.|+++|+|..|++....|.|..+|+.+-.. +..-. +. ..... +.-..+|+.
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 33222 1111 1122367999999999888876699999999874322 21110 11 12233 344457776
Q ss_pred -EEEEECCCeEEE
Q 010794 485 -IAACFANHTVCV 496 (501)
Q Consensus 485 -la~~~~d~~v~v 496 (501)
|++...++.+.+
T Consensus 248 llV~~~~~~~~~l 260 (334)
T 2p9w_A 248 VLVGARAPYAISF 260 (334)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEcCCCCEEEE
Confidence 444455554444
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.33 E-value=0.055 Score=51.01 Aligned_cols=108 Identities=15% Similarity=0.177 Sum_probs=64.9
Q ss_pred ceeEEEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcE
Q 010794 338 EVNCVKWDPTGSLLASCS-----------------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQL 400 (501)
Q Consensus 338 ~v~~v~~~~~~~~l~s~s-----------------~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~ 400 (501)
..+.+++.++|.+.++.. ..|.|.-++. ++ +..+...-.....++|+|++. .
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~--------~ 234 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGK--------Y 234 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSS--------E
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCC--------E
Confidence 467888888888777654 1234444443 32 222222234567899999986 3
Q ss_pred EEEEEeCCCeEEEEeCCC-CeE--EEEeeCCCCCeEEEEECC-CCCEEEEEeCC-CcEEEEe
Q 010794 401 ILASASFDSTVKLWDVEL-GKL--LYSLNGHREPVYSLAFSP-TGEYLASGSLD-KSMHIWS 457 (501)
Q Consensus 401 ~l~sgs~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~l~~sp-dg~~lasgs~D-g~i~iw~ 457 (501)
+.++-+..+.|..|++.. ++. ...+. .......+++.+ +|++.+++..+ +.|..|+
T Consensus 235 lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred EEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 555566778999999863 332 12232 234567899999 59988877644 2344344
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.25 E-value=0.046 Score=51.56 Aligned_cols=155 Identities=13% Similarity=0.104 Sum_probs=90.4
Q ss_pred eeEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCc-eeeecc--c-----CCCCEEEEEEcCCCCCCCCCCC
Q 010794 339 VNCVKWDPTGSLLASCS------------DDVTAKIWNMKQDK-YVHDLR--E-----HSKEIYTIRWSPTGSGTNNPNQ 398 (501)
Q Consensus 339 v~~v~~~~~~~~l~s~s------------~Dg~i~iwd~~~~~-~~~~~~--~-----~~~~v~~i~~~p~g~~~~~~~~ 398 (501)
.-.+...|+|..+++++ .+|.|.++|.++.. ....+. + ..-....+.+.++.. ..
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d-----g~ 126 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD-----NT 126 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT-----CC
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC-----Cc
Confidence 44666788876666652 68999999987421 112221 1 122445555544311 01
Q ss_pred cEEEEEEeC--CCeEEEEeCCC--Ce--EEEEeeCC-CCCeEEEEECCCCCEEEEEeC-----------------CCcEE
Q 010794 399 QLILASASF--DSTVKLWDVEL--GK--LLYSLNGH-REPVYSLAFSPTGEYLASGSL-----------------DKSMH 454 (501)
Q Consensus 399 ~~~l~sgs~--dg~i~iwd~~~--~~--~~~~~~~h-~~~v~~l~~spdg~~lasgs~-----------------Dg~i~ 454 (501)
..++++-.. +..|.+|++.. +. .+.++.+. -...+++++.++|.+.++... .|.|.
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 123333222 56788877654 22 22334432 245799999999998887641 24555
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEE-ECCCeEEEEEee
Q 010794 455 IWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAAC-FANHTVCVLDFR 500 (501)
Q Consensus 455 iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~-~~d~~v~v~~~~ 500 (501)
.++. +++.....+-...+.++|||||+.|..+ +..+.|.+|++.
T Consensus 207 r~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 207 YYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 5554 3333333444557899999999877766 457889999874
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.21 E-value=0.25 Score=50.62 Aligned_cols=306 Identities=8% Similarity=0.035 Sum_probs=157.9
Q ss_pred cceeEEEECCCCC-EEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeC
Q 010794 154 SEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 232 (501)
Q Consensus 154 ~~V~~~~~sp~~~-~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~ 232 (501)
.....+++.+.+. +.++-...+.|.+.++..... .... . ........|++.|.+.+|+....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~---------~~l~----~----~~l~~P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---------KVLF----W----QELDQPRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---------EEEE----C----SSCSCCCCEEEETTTTEEEEEEC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE---------EEEE----e----CCCCCCceEEEecCCCeEEEecc
Confidence 4678999999655 455555678899998764321 1110 0 01223467888886555555443
Q ss_pred --CCeEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEE-ecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCce
Q 010794 233 --DGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 308 (501)
Q Consensus 233 --dg~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (501)
.+.|...+.++.....+. ..-....+|++.+.+..|+.+ +..+.|...|+..................+.+..+..
T Consensus 147 g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~l 226 (619)
T 3s94_A 147 GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDIL 226 (619)
T ss_dssp SSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEE
T ss_pred CCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEE
Confidence 356666677765444332 223345899999987776655 4457788888865433222221122223455555566
Q ss_pred EEEecCCCeEEEEEcCCCcceeeecC-----------CC--------------CceeEEEE-cC----------------
Q 010794 309 FATSSTDNMIYVCKIGENRPIKTFAG-----------HQ--------------GEVNCVKW-DP---------------- 346 (501)
Q Consensus 309 ~~~~~~d~~i~~~~~~~~~~~~~~~~-----------h~--------------~~v~~v~~-~~---------------- 346 (501)
+++-...+.|...+..+++....+.. |. +....+++ +|
T Consensus 227 y~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~ 306 (619)
T 3s94_A 227 YWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLL 306 (619)
T ss_dssp EEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBC
T ss_pred EEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheec
Confidence 66666677787777654432221110 10 00111111 11
Q ss_pred -CCC--------EEEEEeCCCeEEEEeCCCCceee-ecc-cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEe
Q 010794 347 -TGS--------LLASCSDDVTAKIWNMKQDKYVH-DLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWD 415 (501)
Q Consensus 347 -~~~--------~l~s~s~Dg~i~iwd~~~~~~~~-~~~-~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd 415 (501)
|++ +|+.+ ..+.|+..++....... .+. ..-..+..+.|.+.+. .++.+-...+.|+-++
T Consensus 307 ~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~--------~ly~sD~~~~~I~r~~ 377 (619)
T 3s94_A 307 ENGKTCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEG--------YIYWTDDEVRAIRRSF 377 (619)
T ss_dssp TTSSCBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTT--------EEEEEETTTTEEEEEE
T ss_pred ccCcccCCCCceEEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCC--------eEEEEeCCCCeEEEEE
Confidence 111 12222 22345555554332110 010 1123456677766432 2344444567777777
Q ss_pred CCCCeEEEEeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEE
Q 010794 416 VELGKLLYSLNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIA 486 (501)
Q Consensus 416 ~~~~~~~~~~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la 486 (501)
+........+.........|++.+.+. +..+-+..+.|.+.++.... ..++. .-....++++.|....|.
T Consensus 378 ~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly 450 (619)
T 3s94_A 378 IDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMY 450 (619)
T ss_dssp TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEE
T ss_pred cCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEE
Confidence 764332222332234567899987544 55555567899999986543 33332 234578888888633333
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.20 E-value=0.26 Score=50.58 Aligned_cols=151 Identities=11% Similarity=-0.004 Sum_probs=84.4
Q ss_pred cceeEEEECCCCCEE-EEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeC
Q 010794 154 SEVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 232 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l-~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~ 232 (501)
.....+|+.+.+..| ++-...+.|.+.++..... ..+. . ........|++.|...+|+....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~---------~~l~----~----~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR---------QVLV----W----KDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC---------EEEE----C----SSCCCEEEEEEETTTTEEEEEEC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE---------EEEE----e----CCCCCcccEEEccCCCeEEEeCC
Confidence 456789998875544 5555677888888753211 1110 0 11234578999985555555442
Q ss_pred --CCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEE-ecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceE
Q 010794 233 --DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF 309 (501)
Q Consensus 233 --dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (501)
.+.|...++++.....+...-....+|++.+.+..|+.+ ...+.|...|+..... ..+.........+....+..+
T Consensus 143 g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly 221 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIY 221 (628)
T ss_dssp SSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEE
T ss_pred CCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEE
Confidence 467777777776544443334456889999987776655 4467888888865433 222222222233333333444
Q ss_pred EEecCCCeEEEEE
Q 010794 310 ATSSTDNMIYVCK 322 (501)
Q Consensus 310 ~~~~~d~~i~~~~ 322 (501)
++-...+.|...+
T Consensus 222 ~tD~~~~~I~~~d 234 (628)
T 4a0p_A 222 WTDWSRRSIERAN 234 (628)
T ss_dssp EEETTTTEEEEEE
T ss_pred EecCCCCEEEEEE
Confidence 4444444444444
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.10 E-value=0.2 Score=47.37 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=56.9
Q ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC---CCEEEE
Q 010794 153 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLAT 229 (501)
Q Consensus 153 ~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~---~~~l~s 229 (501)
-....+++|.|+|+++++ ..+|.|++++ .++. ..+..+. ...........|+|+|+ +..|+.
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~------------~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK------------KLVASFD-VANVGEAGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE------------EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc------------eEeeccc-eeecCCCceeeEEeCCCCCcCCEEEE
Confidence 345689999999986555 5569898886 2221 0111111 00111245789999997 444444
Q ss_pred EeC----C----CeEEEEECCCc------eeE---eec---CCCCCEEEEEecCCCCEEEEE
Q 010794 230 GSY----D----GQARIWSTNGD------LKC---TLS---KHKGPIFSLKWNKKGDYLLTG 271 (501)
Q Consensus 230 g~~----d----g~i~iw~~~~~------~~~---~~~---~h~~~V~~l~~~~~~~~l~s~ 271 (501)
+.. + +.|..|+..+. ... .+. .|. ...|+|.|+|..+++-
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEEC
T ss_pred EEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEE
Confidence 433 2 45666665432 111 122 233 2568999999766653
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.85 E-value=0.067 Score=49.19 Aligned_cols=208 Identities=12% Similarity=0.133 Sum_probs=101.6
Q ss_pred CeEEEEeCCCcceeEeeeeccCC-eEEEecCCCceEEEecCC-----CeEEEEEcCCCc---c--eeeecCCCCceeEEE
Q 010794 275 KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENR---P--IKTFAGHQGEVNCVK 343 (501)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~---~--~~~~~~h~~~v~~v~ 343 (501)
..+.+||+.+.+|...-...... -......++..++.++.+ ..+++++..+.. - +..+........++.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 36788898888766532211110 111222345556665543 457888876654 1 111111111112222
Q ss_pred EcCCCCEEEEEeCCC-----eEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----CeE
Q 010794 344 WDPTGSLLASCSDDV-----TAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STV 411 (501)
Q Consensus 344 ~~~~~~~l~s~s~Dg-----~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~i 411 (501)
+ ++++++.|+.++ .+.+||..+.+... .+.........+.+ ++ . +++.|+.+ ..+
T Consensus 111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SG--------V-IYCLGGYDGLNILNSV 177 (301)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TT--------E-EEEECCBCSSCBCCCE
T ss_pred E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CC--------E-EEEECCCCCCcccceE
Confidence 2 677777777543 57888877654322 11111111111111 22 2 44455543 458
Q ss_pred EEEeCCCCeEEEE--eeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--EecCC-CEEEEEECCC
Q 010794 412 KLWDVELGKLLYS--LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTGNG-GIFEVCWNKE 481 (501)
Q Consensus 412 ~iwd~~~~~~~~~--~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~~~-~i~~~~ws~~ 481 (501)
.+||+.+.+-... +.........+.+ ++.+++.|+.+ ..|.+||+.+.+-... .+... ....+.+ +
T Consensus 178 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 253 (301)
T 2vpj_A 178 EKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--R 253 (301)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred EEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--C
Confidence 8888876643221 1111112223333 56777777764 4699999987754322 11111 1122222 6
Q ss_pred CCEEEEEECC-----CeEEEEEe
Q 010794 482 GDKIAACFAN-----HTVCVLDF 499 (501)
Q Consensus 482 g~~la~~~~d-----~~v~v~~~ 499 (501)
++.++.|+.+ ..|.+||.
T Consensus 254 ~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 254 GRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp TEEEEECCBCSSSBEEEEEEEET
T ss_pred CEEEEEcCcCCCcccccEEEEcC
Confidence 6777777655 35677775
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.82 E-value=0.14 Score=48.89 Aligned_cols=112 Identities=15% Similarity=0.196 Sum_probs=73.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc------------eeeeccc------CCCCEEEEEEcCCCCCCCCCCCc
Q 010794 338 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK------------YVHDLRE------HSKEIYTIRWSPTGSGTNNPNQQ 399 (501)
Q Consensus 338 ~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~------------~~~~~~~------~~~~v~~i~~~p~g~~~~~~~~~ 399 (501)
.|..+..+|+|.+||..+. ..|.|-.+..+. ....++- ...+|..+.|+|-+.. .
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~------d 139 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYR------D 139 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGG------G
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCC------C
Confidence 5778999999999988865 478887765221 0111111 2467999999998752 1
Q ss_pred EEEEEEeCCCeEEEEeCCCC--eEE--------EEeeCCCCCeEEEEECCCCCEEEEE--eCCCcEEEE
Q 010794 400 LILASASFDSTVKLWDVELG--KLL--------YSLNGHREPVYSLAFSPTGEYLASG--SLDKSMHIW 456 (501)
Q Consensus 400 ~~l~sgs~dg~i~iwd~~~~--~~~--------~~~~~h~~~v~~l~~spdg~~lasg--s~Dg~i~iw 456 (501)
..|++-..|+.||+||+... ++. +.+......|.+++|+++|-.|... +..|.|+-.
T Consensus 140 s~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 140 SCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 24667778999999999752 111 1122233568999999988655554 477877644
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.71 E-value=0.41 Score=45.13 Aligned_cols=54 Identities=19% Similarity=0.321 Sum_probs=34.6
Q ss_pred ceeEEEEcC-------CCCEEEEEeCCCeEEEEeCCCCceeee--c-ccCCCCEEEEEEcCCCC
Q 010794 338 EVNCVKWDP-------TGSLLASCSDDVTAKIWNMKQDKYVHD--L-REHSKEIYTIRWSPTGS 391 (501)
Q Consensus 338 ~v~~v~~~~-------~~~~l~s~s~Dg~i~iwd~~~~~~~~~--~-~~~~~~v~~i~~~p~g~ 391 (501)
.+..+.|.. +|.++++....+.|...++..++.+.. + ......+..+++.|+|.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 456777753 467777777777887777765543322 1 12234678888888885
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.62 E-value=1.2 Score=49.14 Aligned_cols=305 Identities=12% Similarity=0.106 Sum_probs=147.4
Q ss_pred CCCCCEEEEEECCCcEEEEecCCCCC-CCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 010794 162 SPAGSLLASGSGDSTARIWTIADGTS-NGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWS 240 (501)
Q Consensus 162 sp~~~~l~sgs~D~~i~iWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw~ 240 (501)
..++..++-+..+|.+.+-.+..... ... ..+....+..+. ....-.++++-.+| +|+.|+..|.-.+|.
T Consensus 283 ~~~~~~~LL~~~~G~l~~l~l~~d~~~~~~---~~V~~l~i~~~~-----~~~~~ssl~~l~~g-~lFvgS~~Gds~l~~ 353 (1158)
T 3ei3_A 283 DPNGSRYLLGDMEGRLFMLLLEKEEQMDGT---VTLKDLRVELLG-----ETSIAECLTYLDNG-VVFVGSRLGDSQLVK 353 (1158)
T ss_dssp STTSSEEEEEETTCEEEEEEEEEEC--------CEEEEEEEEEEE-----ECSCCSEEEECSTT-EEEEECSSSCEEEEE
T ss_pred ecCCCEEEEEeCCCCEEEEEEEEcCCccCc---eeEEEEEEEEcC-----CccCccEEEEECCC-EEEEEEecCCcEEEE
Confidence 34556677777889887665532100 000 001111111111 11223567766655 788888888888877
Q ss_pred CCCc---------eeEeecCCCCCEEEEEecCC----CCEEEEEec---CCeEEEEeCCCccee---Eeeeec-cCCeEE
Q 010794 241 TNGD---------LKCTLSKHKGPIFSLKWNKK----GDYLLTGSC---DKTAIVWDVKTEEWK---QQFEFH-SGPTLD 300 (501)
Q Consensus 241 ~~~~---------~~~~~~~h~~~V~~l~~~~~----~~~l~s~s~---D~~i~iwd~~~~~~~---~~~~~~-~~~~~~ 300 (501)
.... ....+. .-+||..++.... ...|++++. +|++++.- .+--. ..+... ...+..
T Consensus 354 ~~~~~~~~~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr--~Gi~~~~~~~~~l~gv~~iWt 430 (1158)
T 3ei3_A 354 LNVDSNEQGSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR--NGIGIHEHASIDLPGIKGLWP 430 (1158)
T ss_dssp ECSSCCTTSCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEE--ESBCEEEEEEECCCSCCEEEE
T ss_pred EecCCCCccceEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEe--cCCCEEEEEeecCCCccEEEE
Confidence 5421 112232 3478888876432 246766553 57788763 22111 111111 011222
Q ss_pred EecC----CCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeC---------CCeEEEEeCCC
Q 010794 301 VDWR----NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD---------DVTAKIWNMKQ 367 (501)
Q Consensus 301 ~~~~----~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~---------Dg~i~iwd~~~ 367 (501)
+... .+..++.+..+.+ .++.+... .+.... ...|..+...|+++.- ...|++.+...
T Consensus 431 l~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e-~veev~-------~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~ 501 (1158)
T 3ei3_A 431 LRSDPNRETDDTLVLSFVGQT-RVLMLNGE-EVEETE-------LMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEP 501 (1158)
T ss_dssp ECCCSSCSSCCEEEEEETTEE-EEEEEETT-EEEEEC-------CTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSS
T ss_pred EeecCCCCCCCEEEEECCCCe-EEEEEeCC-cccccc-------cccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCC
Confidence 2211 1223333333333 33333111 111111 0011222233333321 22456666544
Q ss_pred CceeeecccCC-CCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCeEEEEECCC-----
Q 010794 368 DKYVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPT----- 440 (501)
Q Consensus 368 ~~~~~~~~~~~-~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spd----- 440 (501)
...+..+.... ..|...+.+. . .++.++ .+.|.++.+..+..... -..-...|.|+++.|.
T Consensus 502 ~~~~~~w~~p~~~~I~~As~n~----------~-~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 502 KALVSEWKEPQAKNISVASCNS----------S-QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CCEEEEECCTTCCCCCEEEECS----------S-EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred CeEEEEEECCCCCEEEEEEeCC----------C-EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 43443333221 2233333221 1 233334 57888887766543211 1113457999999864
Q ss_pred -CCEEEEEeC-CCcEEEEeCCCCeeEEEEec--CCCEEEEEECC--CCCEEEEEECCCeEEEEEe
Q 010794 441 -GEYLASGSL-DKSMHIWSLKEGKIVKTYTG--NGGIFEVCWNK--EGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 441 -g~~lasgs~-Dg~i~iw~~~~~~~~~~~~~--~~~i~~~~ws~--~g~~la~~~~d~~v~v~~~ 499 (501)
+.++|.|.+ |++|+|+++.+.+.+....- ...+.+++... ..-+|..|..||.+..+.+
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 379999997 99999999987665543322 22344443322 2357889999998876655
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.59 E-value=0.17 Score=46.37 Aligned_cols=223 Identities=11% Similarity=0.117 Sum_probs=107.8
Q ss_pred CCCEEEEEe-CC-----CeEEEEECCCceeEeecCCC---CCEEEEEecCCCCEEEEEecC-----CeEEEEeCCCcc--
Q 010794 223 EGTLLATGS-YD-----GQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEE-- 286 (501)
Q Consensus 223 ~~~~l~sg~-~d-----g~i~iw~~~~~~~~~~~~h~---~~V~~l~~~~~~~~l~s~s~D-----~~i~iwd~~~~~-- 286 (501)
++.+++.|+ .+ ..+.+||.....-..+..-. .....+. .++..++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 344556665 22 36777887654332222111 1111222 245566667654 468999998887
Q ss_pred -eeEeeeeccCC-eEEEecCCCceEEEecCC-----CeEEEEEcCCCcc--eeeecCCCCceeEEEEcCCCCEEEEEeCC
Q 010794 287 -WKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDD 357 (501)
Q Consensus 287 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~D 357 (501)
|...-...... -..+...++..++.++.+ ..+.+++..+..- +..+......-.++.+ ++++++.|+.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 76543221111 011112245555655432 3577777665431 1111111111122222 67777887765
Q ss_pred C-----eEEEEeCCCCceeee--cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEEE-
Q 010794 358 V-----TAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLYS- 424 (501)
Q Consensus 358 g-----~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~~- 424 (501)
+ .+.+||..+...... +.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-...
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~---------~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND---------HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT---------EEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC---------EEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 3 578888876643321 1111111111221 12 245556553 4688999887653221
Q ss_pred -eeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010794 425 -LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 462 (501)
Q Consensus 425 -~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 462 (501)
+.........+.+ ++++++.|+.+ ..|.+||..+.+
T Consensus 239 ~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 239 SMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 1111112223333 56777777765 357888887654
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.52 E-value=0.49 Score=43.51 Aligned_cols=224 Identities=12% Similarity=0.161 Sum_probs=133.3
Q ss_pred ecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCC-CcceeeecCCC---
Q 010794 261 WNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAGHQ--- 336 (501)
Q Consensus 261 ~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~h~--- 336 (501)
.||..+.++.=+ ..++.++|+.+...++.+... .++.=-.|.+...++... +..|+.|++.. ..|++.|..|.
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~ 150 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLA 150 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGT
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhcc
Confidence 477777665544 688999999999888877764 355555666655544333 45799999864 57888887764
Q ss_pred -CceeEEEEcCCCCEEEEEeC-------CCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC-
Q 010794 337 -GEVNCVKWDPTGSLLASCSD-------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF- 407 (501)
Q Consensus 337 -~~v~~v~~~~~~~~l~s~s~-------Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~- 407 (501)
..|..-..+++.++++..+- .|.+.+|....+ .-+.+.+|......+. .+|. +....+++-+..
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~--~~g~----~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFK--MEGN----AEESTLFCFAVRG 223 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEEC--CTTC----SSCEEEEEEEEEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEe--cCCC----CCCceEEEEEEec
Confidence 35667778899998765432 367788987644 3344556654433332 2322 111223333332
Q ss_pred --CCeEEEEeCCCC---eE-----EEEe--e--CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCC
Q 010794 408 --DSTVKLWDVELG---KL-----LYSL--N--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGG 472 (501)
Q Consensus 408 --dg~i~iwd~~~~---~~-----~~~~--~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~ 472 (501)
.+.++|.++... .. ...+ . +-.+.--++..|+--..+..-+.-|.|++||+.+|.++..-.- ...
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 257888887432 11 1111 0 1123334566666666777778899999999999988655432 233
Q ss_pred EEEEEECCCCCEEEEEECCCeE
Q 010794 473 IFEVCWNKEGDKIAACFANHTV 494 (501)
Q Consensus 473 i~~~~ws~~g~~la~~~~d~~v 494 (501)
|+..+-+....-+++-...|.|
T Consensus 304 iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 304 IFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEEEEEEGGGTEEEEEETTCEE
T ss_pred eEEecccCCCCcEEEEcCCCEE
Confidence 5444444443344444455554
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.42 E-value=0.4 Score=43.95 Aligned_cols=221 Identities=9% Similarity=0.111 Sum_probs=107.1
Q ss_pred CEEEEEeCC--CeEEEEECCCceeEeecC---CCCCEEEEEecCCCCEEEEEecC----CeEEEEeCCCcceeEeeeecc
Q 010794 225 TLLATGSYD--GQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFEFHS 295 (501)
Q Consensus 225 ~~l~sg~~d--g~i~iw~~~~~~~~~~~~---h~~~V~~l~~~~~~~~l~s~s~D----~~i~iwd~~~~~~~~~~~~~~ 295 (501)
.+++.|+.+ ..+.+||.....-..+.. ....-..+.+ ++..++.|+.+ ..+.+||+.+..|...-....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 355556553 567788876543222211 1111112222 45566667654 678899999988765432211
Q ss_pred CC-eEEEecCCCceEEEecCC------CeEEEEEcCCCccee--eecCCCCceeEEEEcCCCCEEEEEeC---------C
Q 010794 296 GP-TLDVDWRNNVSFATSSTD------NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSD---------D 357 (501)
Q Consensus 296 ~~-~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~---------D 357 (501)
.. -......++..++.++.+ ..+.+++..+..-.. .+......-.++. .++++++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccccc
Confidence 11 011122245556666543 457777776543111 1111111111222 26677777764 2
Q ss_pred CeEEEEeCCCCceeee--cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEE--EEeeCC
Q 010794 358 VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLL--YSLNGH 428 (501)
Q Consensus 358 g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~--~~~~~h 428 (501)
..+.+||..+...... +.........+.+ ++ . +++.|+.+ ..+.+||+.+.+=. ..+...
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV--KD--------K-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------E-EEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE--CC--------E-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 3478888876643221 1111111111111 22 2 44445433 35888888765421 112211
Q ss_pred CCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010794 429 REPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 462 (501)
Q Consensus 429 ~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 462 (501)
......+.+ ++.+++.||.+ ..|.+||+.+.+
T Consensus 238 r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 238 GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 222233344 66788888854 468899988764
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.42 E-value=0.43 Score=46.77 Aligned_cols=109 Identities=10% Similarity=0.126 Sum_probs=61.0
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeeccc------CCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC-
Q 010794 337 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDLRE------HSKEIYTIRWSPTGSGTNNPNQQLILASASF- 407 (501)
Q Consensus 337 ~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~--~~~~~~------~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~- 407 (501)
.....++|.|+|+++++-...+.|++++...+.. +..+.. .......|+|+|+-. .++.++++....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~----~~g~lYv~~s~~~ 102 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFK----NNPYIYISGTFKN 102 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTT----TSCEEEEEEEEEC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcC----cCCEEEEEEeccc
Confidence 3567999999999887765555788887654432 222211 234567899998521 012234433220
Q ss_pred ----------CCeEEEEeCCCC-------eEEEE-eeC-CCCCeEEEEECCCCCEEEEEeC
Q 010794 408 ----------DSTVKLWDVELG-------KLLYS-LNG-HREPVYSLAFSPTGEYLASGSL 449 (501)
Q Consensus 408 ----------dg~i~iwd~~~~-------~~~~~-~~~-h~~~v~~l~~spdg~~lasgs~ 449 (501)
...|.-|++..+ +.+.. +.. .......|+|.|||.+.++.+.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124444443221 22222 221 1124689999999988777553
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.36 E-value=0.18 Score=46.22 Aligned_cols=209 Identities=14% Similarity=0.167 Sum_probs=98.5
Q ss_pred CeEEEEeCCCcceeEeeeeccCC-eEEEecCCCceEEEecCC-----CeEEEEEcCCCcc--eeeecCCCCceeEEEEcC
Q 010794 275 KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDP 346 (501)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~ 346 (501)
..+.+||+.+..|...-...... -..+...++..++.++.+ ..+++++..+..- +..+........++.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--
Confidence 35778888887765532111110 011122244555555533 3467777655431 1111111111122222
Q ss_pred CCCEEEEEeCCC-----eEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC-------CCeEE
Q 010794 347 TGSLLASCSDDV-----TAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-------DSTVK 412 (501)
Q Consensus 347 ~~~~l~s~s~Dg-----~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~-------dg~i~ 412 (501)
++.+++.|+.++ .+.+||..+.+... .+.........+.+ ++ . +++.|+. -..+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG--------L-LYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------E-EEEECCEETTTTEECCCEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC--------E-EEEEeCCCCCCCccccEEE
Confidence 577777777654 47788877654322 11111111111111 11 2 3344443 23588
Q ss_pred EEeCCCCeEEE--EeeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--EecCC-CEEEEEECCCC
Q 010794 413 LWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTGNG-GIFEVCWNKEG 482 (501)
Q Consensus 413 iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~~~-~i~~~~ws~~g 482 (501)
+||+.+.+=.. .+.........+.+ ++.+++.||.+ ..+.+||+.+.+-... ..... ....+. -++
T Consensus 177 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~ 252 (302)
T 2xn4_A 177 CYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNG 252 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETT
T ss_pred EEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECC
Confidence 88887664222 12211122223333 56777888764 3699999987653322 11111 111222 266
Q ss_pred CEEEEEECCC-----eEEEEEee
Q 010794 483 DKIAACFANH-----TVCVLDFR 500 (501)
Q Consensus 483 ~~la~~~~d~-----~v~v~~~~ 500 (501)
+.++.|+.++ .|.+||..
T Consensus 253 ~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 253 LLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEEECCcCCCcccccEEEEcCC
Confidence 7777776553 47888753
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.34 E-value=0.29 Score=44.96 Aligned_cols=217 Identities=6% Similarity=0.024 Sum_probs=105.3
Q ss_pred EEEEEec--CCeEEEEeCCCcceeEeeeeccCC-eEEEecCCCceEEEecCC----CeEEEEEcCCCcce--eeecCCCC
Q 010794 267 YLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD----NMIYVCKIGENRPI--KTFAGHQG 337 (501)
Q Consensus 267 ~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d----~~i~~~~~~~~~~~--~~~~~h~~ 337 (501)
.++.|+. ...+.+||+.+.+|...-...... -..+...++..++.++.+ ..+.+++..+..-. ..+.....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 3445554 357899999998876532211110 011222345556666543 56777777654311 11111111
Q ss_pred ceeEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeee--cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC--
Q 010794 338 EVNCVKWDPTGSLLASCSDD------VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-- 407 (501)
Q Consensus 338 ~v~~v~~~~~~~~l~s~s~D------g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~-- 407 (501)
...++.+ ++++++.|+.+ ..+.+||..+...... +.........+.+ ++ . +++.|+.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~ 160 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NG--------L-IYVCGGSLG 160 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------E-EEEECCEES
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CC--------E-EEEECCCCC
Confidence 1122222 67777888765 3588888877643221 1111111111111 22 2 3344432
Q ss_pred -------CCeEEEEeCCCCeEEEE--eeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--EecCC
Q 010794 408 -------DSTVKLWDVELGKLLYS--LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTGNG 471 (501)
Q Consensus 408 -------dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~~~ 471 (501)
-..+.+||+.+.+=... +......-..+.+ ++++++.||.+ ..+.+||+.+.+-... ++...
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 34588888887642211 1111111222333 56677777654 4689999987653222 21111
Q ss_pred -CEEEEEECCCCCEEEEEECC-----CeEEEEEee
Q 010794 472 -GIFEVCWNKEGDKIAACFAN-----HTVCVLDFR 500 (501)
Q Consensus 472 -~i~~~~ws~~g~~la~~~~d-----~~v~v~~~~ 500 (501)
....+.+ ++++++.|+.+ ..+.+||..
T Consensus 239 ~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 239 VTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp SCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred cceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 1222223 66777777644 457777753
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.33 E-value=0.27 Score=45.01 Aligned_cols=222 Identities=15% Similarity=0.179 Sum_probs=103.7
Q ss_pred CEEEEEeCC----CeEEEEECCCceeEeecCCCCC--EEEEEecCCCCEEEEEecC-----CeEEEEeCCCcceeEeeee
Q 010794 225 TLLATGSYD----GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 225 ~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~--V~~l~~~~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~ 293 (501)
.+++.|+.+ ..+.+||.....-..+.....+ -.++... ++..++.|+.+ ..+.+||+.+.+|...-..
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 445555543 3567777655433222111111 0111111 45566666654 3588999998887654322
Q ss_pred ccCC-eEEEecCCCceEEEecCCC-----eEEEEEcCCCcce--eeecCCCCceeEEEEcCCCCEEEEEeCC-------C
Q 010794 294 HSGP-TLDVDWRNNVSFATSSTDN-----MIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDD-------V 358 (501)
Q Consensus 294 ~~~~-~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~D-------g 358 (501)
.... -......++..++.++.++ .+.+++..+..-. ..+........++.+ ++++++.|+.+ .
T Consensus 96 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 96 RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECC
T ss_pred CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCcccc
Confidence 1111 0111222445555554332 4666776554311 111111111122222 56777777643 3
Q ss_pred eEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEE--EeeCCC
Q 010794 359 TAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLY--SLNGHR 429 (501)
Q Consensus 359 ~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~--~~~~h~ 429 (501)
.+.+||..+..... .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-.. .+....
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~---------~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 242 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMSTRRSGAGVGVL--NN---------LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR 242 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT---------EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred EEEEEeCCCCcEEECCCCccccccccEEEE--CC---------EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc
Confidence 47888887664322 11111111111111 22 245556543 368889988764322 111111
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCe
Q 010794 430 EPVYSLAFSPTGEYLASGSLDK-----SMHIWSLKEGK 462 (501)
Q Consensus 430 ~~v~~l~~spdg~~lasgs~Dg-----~i~iw~~~~~~ 462 (501)
.....+.+ ++++++.||.++ .|.+||+.+.+
T Consensus 243 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 243 RNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 11122233 667777777653 48889888764
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.29 E-value=0.35 Score=45.37 Aligned_cols=149 Identities=14% Similarity=0.155 Sum_probs=83.8
Q ss_pred CCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeec----ccCCCCEEEEEEcCCCCCCCCCCCcEEEE-EEeC
Q 010794 335 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDL----REHSKEIYTIRWSPTGSGTNNPNQQLILA-SASF 407 (501)
Q Consensus 335 h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~--~~~~----~~~~~~v~~i~~~p~g~~~~~~~~~~~l~-sgs~ 407 (501)
.-.....++|.|+|.++++-...|.|++++...+.. +..+ .........|+++|+-.. +..+|+. +...
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~----~g~lYv~yt~~~ 105 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYAS----DHMVYAYFTSAS 105 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHH----HCEEEEEEECSS
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecccccc----CCEEEEEEecCC
Confidence 344577999999999888776689999998655443 2111 123456788999985110 0112332 1123
Q ss_pred CCeEEEEeCCC----------CeEEEE-eeC-CCCCeEEEEECCCCCEEEEEeC-------------CCcEEEEeCCCCe
Q 010794 408 DSTVKLWDVEL----------GKLLYS-LNG-HREPVYSLAFSPTGEYLASGSL-------------DKSMHIWSLKEGK 462 (501)
Q Consensus 408 dg~i~iwd~~~----------~~~~~~-~~~-h~~~v~~l~~spdg~~lasgs~-------------Dg~i~iw~~~~~~ 462 (501)
++.|.-|.+.. .+.+.. +.. ....-..|+|.|||.+.++.+. -|.|.-.+.. |+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ 184 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GE 184 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SS
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CC
Confidence 44454454432 223332 321 1113467999999988777542 2445544543 22
Q ss_pred e--------EEEE-ecCCCEEEEEECCCCCEEEEE
Q 010794 463 I--------VKTY-TGNGGIFEVCWNKEGDKIAAC 488 (501)
Q Consensus 463 ~--------~~~~-~~~~~i~~~~ws~~g~~la~~ 488 (501)
+ ...+ .+......++|+|+|...++=
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 1 0112 233446789999998766654
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.26 E-value=0.7 Score=42.56 Aligned_cols=219 Identities=11% Similarity=0.124 Sum_probs=102.1
Q ss_pred EEEEEeCCCeEEEEECCCceeE--eecCC-CCCEEEEEecCCCCEEEEEec----C-------CeEEEEeCCCcceeEee
Q 010794 226 LLATGSYDGQARIWSTNGDLKC--TLSKH-KGPIFSLKWNKKGDYLLTGSC----D-------KTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~~~~~--~~~~h-~~~V~~l~~~~~~~~l~s~s~----D-------~~i~iwd~~~~~~~~~~ 291 (501)
+++.|+ ..+.+||.....-. .+... ...-.++. ..++..++.|+. + ..+.+||+.+.+|...-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLV-TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEE-CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEE-EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344455 57888887654322 11111 11122333 346666677763 1 12778899988875432
Q ss_pred eeccCC-eEEEecCCCceEEEecCC--------CeEEEEEcCCCcc--eeeecCCCCceeEEEEcCCCCEEEEEeC-C--
Q 010794 292 EFHSGP-TLDVDWRNNVSFATSSTD--------NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSD-D-- 357 (501)
Q Consensus 292 ~~~~~~-~~~~~~~~~~~~~~~~~d--------~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~-D-- 357 (501)
...... -..+...++..++.++.+ ..+.+++..+..= +..+......-.++. .++++++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCC
Confidence 211110 011122244555555521 3577777765421 111111111111222 35677777776 2
Q ss_pred ---CeEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCC-----eEEEEeCCCCeEEEE--e
Q 010794 358 ---VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-----TVKLWDVELGKLLYS--L 425 (501)
Q Consensus 358 ---g~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg-----~i~iwd~~~~~~~~~--~ 425 (501)
..+.+||..+.+... .+.........+.+ ++ . +++.|+.++ .+.+||+.+.+=... +
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DG--------R-IIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT--------E-EEEEEEECSSSEEEEEEEEETTTTEEEEECCC
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CC--------E-EEEEeccCCCCccceEEEEECCCCeEEECCCC
Confidence 358888887664322 11111111111111 22 2 444555443 578888877642221 1
Q ss_pred eCCCCCeEEEEECCCCCEEEEEeCCC--------------cEEEEeCCCCe
Q 010794 426 NGHREPVYSLAFSPTGEYLASGSLDK--------------SMHIWSLKEGK 462 (501)
Q Consensus 426 ~~h~~~v~~l~~spdg~~lasgs~Dg--------------~i~iw~~~~~~ 462 (501)
...+.....+.+ ++++++.||.++ .|.+||+.+.+
T Consensus 231 p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 231 PQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp SSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 111112223333 567777777642 36788887654
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.08 Score=49.46 Aligned_cols=193 Identities=12% Similarity=0.026 Sum_probs=102.4
Q ss_pred CEEEEEecCCeEEEEeCCCcceeEeeeec-cCCeEEEecC----CCceEEEe-cCCCeEEEEEcCCCcceeeecC----C
Q 010794 266 DYLLTGSCDKTAIVWDVKTEEWKQQFEFH-SGPTLDVDWR----NNVSFATS-STDNMIYVCKIGENRPIKTFAG----H 335 (501)
Q Consensus 266 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~----h 335 (501)
..++.++.||.|.-.|..+|+..-++... ..++...... +...++.. ..||.++.++...+.....+.- .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46889999999999999999877766554 1233322211 22334443 6899999998776533222210 1
Q ss_pred CCceeE---EEE-c----CCCCEEEEEeCCCeEEEEeCCCCceeeecccCCC--CE-----EEEEEcCCCCCCCCCCCcE
Q 010794 336 QGEVNC---VKW-D----PTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK--EI-----YTIRWSPTGSGTNNPNQQL 400 (501)
Q Consensus 336 ~~~v~~---v~~-~----~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~--~v-----~~i~~~p~g~~~~~~~~~~ 400 (501)
..++.. ... . ..+..+++|+.+|.+.-.|+.+|+.+..+..... .+ .|.+...-.. .....
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~----d~~~~ 166 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKL----QECEN 166 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC------------------------CC
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccccccccccccccc----ccCCC
Confidence 111111 000 0 1456788999999999999999998877653211 00 0111000000 00001
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEee-----CCCCC--e-EEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010794 401 ILASASFDSTVKLWDVELGKLLYSLN-----GHREP--V-YSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 465 (501)
Q Consensus 401 ~l~sgs~dg~i~iwd~~~~~~~~~~~-----~h~~~--v-~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 465 (501)
.|..|..+..+.+.+ ++|+ ++.+. ..... + ..-.++.|+.++ .++.||.|.-+|..+|+.+.
T Consensus 167 ~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 167 MIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-APFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-EEETTTEEEEECSTTCCEEE
T ss_pred eEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEE-EECCCCEEEEEECCCCcEEE
Confidence 345566666666655 3443 22211 11000 0 000012346664 47889999999998888776
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.16 E-value=0.25 Score=42.64 Aligned_cols=139 Identities=11% Similarity=0.034 Sum_probs=79.5
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeecccCCCC--------EEEEEEcCCCCCCCCCCCcEEEEEEeCCC
Q 010794 338 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE--------IYTIRWSPTGSGTNNPNQQLILASASFDS 409 (501)
Q Consensus 338 ~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~--------v~~i~~~p~g~~~~~~~~~~~l~sgs~dg 409 (501)
.+..++|+|+|.+.+. .+|.+.-.+..+.... ........ ..++.|.|+|. +.++ .||
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~t~IG~~Gw~~F~a~~fD~~G~---------LYav--~dG 107 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRAKKIGNGGWNQFQFLFFDPNGY---------LYAV--SKD 107 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHCEEEECSCGGGCSEEEECTTSC---------EEEE--ETT
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccccEecccccccceEEEECCCCC---------EEEe--CCC
Confidence 5679999999998777 6677665554332111 11111112 25678888884 3333 569
Q ss_pred eEEEEeCCCC-eEE-----EEe-eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCe------eEEEEe-cC-CCEE
Q 010794 410 TVKLWDVELG-KLL-----YSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK------IVKTYT-GN-GGIF 474 (501)
Q Consensus 410 ~i~iwd~~~~-~~~-----~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~------~~~~~~-~~-~~i~ 474 (501)
.|.-++-.+. ..- ..+ .+--..+..|.|.|+|.+.+.. |+.++-+...++. ....+- .. ....
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr 185 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK 185 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence 9987775321 100 111 1112457999999999988776 7776544433221 111111 11 1244
Q ss_pred EEEECCCCCEEEEEECCCeE
Q 010794 475 EVCWNKEGDKIAACFANHTV 494 (501)
Q Consensus 475 ~~~ws~~g~~la~~~~d~~v 494 (501)
.+.|.++|...++. ++.+
T Consensus 186 ~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEEECTTSCEEEEE--TTEE
T ss_pred EEEECCCCcEEEEe--CCeE
Confidence 57799999888777 6654
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.06 E-value=0.4 Score=44.23 Aligned_cols=204 Identities=9% Similarity=0.053 Sum_probs=95.8
Q ss_pred EEEEecCCeEEEEeCCCcceeEeeeecc---CCeEEEecCCCceEEEecC-----C------CeEEEEEcCCCcc--eee
Q 010794 268 LLTGSCDKTAIVWDVKTEEWKQQFEFHS---GPTLDVDWRNNVSFATSST-----D------NMIYVCKIGENRP--IKT 331 (501)
Q Consensus 268 l~s~s~D~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----d------~~i~~~~~~~~~~--~~~ 331 (501)
++.|+ ..+.+||+.+.+|.. ..... ..-.++...++..++.++. . ..++.++..+.+- +..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 44455 579999999998864 22111 1122333345555555552 1 1266677655431 111
Q ss_pred ecCCCCceeEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEE
Q 010794 332 FAGHQGEVNCVKWDPTGSLLASCSDD--------VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLI 401 (501)
Q Consensus 332 ~~~h~~~v~~v~~~~~~~~l~s~s~D--------g~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~ 401 (501)
+.........+.+ ++.+++.|+.+ ..+.+||..+.+... .+.........+. .++ . +
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~--------~-i 151 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMD--------L-V 151 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETT--------E-E
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECC--------E-E
Confidence 1110111112222 56777777742 357888887654322 1111111111111 122 2 4
Q ss_pred EEEEeC-C-----CeEEEEeCCCCeEEE--EeeCCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCeeEEE--
Q 010794 402 LASASF-D-----STVKLWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSLDK-----SMHIWSLKEGKIVKT-- 466 (501)
Q Consensus 402 l~sgs~-d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~Dg-----~i~iw~~~~~~~~~~-- 466 (501)
++.|+. + ..+.+||+.+.+=.. .+......-..+.+ ++++++.||.++ .+.+||+.+.+-...
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 445554 2 468888887654221 11111111223333 667778887654 588999987653322
Q ss_pred EecCC-CEEEEEECCCCCEEEEEECC
Q 010794 467 YTGNG-GIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 467 ~~~~~-~i~~~~ws~~g~~la~~~~d 491 (501)
.+... ....+.+ +++.++.|+.+
T Consensus 230 ~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 230 FPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred CCCcccceeEEEE--CCEEEEECCcc
Confidence 11111 1122222 56677777653
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.00 E-value=1.2 Score=42.76 Aligned_cols=226 Identities=12% Similarity=0.165 Sum_probs=136.9
Q ss_pred EecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcC-CCcceeeecCCC--
Q 010794 260 KWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQ-- 336 (501)
Q Consensus 260 ~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~-- 336 (501)
-.||..+.++-=+ ..++.|+|+.+......+.... ++.=-.|.+...++.. ++..|+.|++. ...|++.|..|.
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-CSSEEEEEESSSSCCCEEEEECCGGG
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-cCCeeEEecccCCCCchhheecchhc
Confidence 3577776655443 6899999999998888777644 3444455544444332 35689999986 456888887764
Q ss_pred --CceeEEEEcCCCCEEEEEe-------CCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC
Q 010794 337 --GEVNCVKWDPTGSLLASCS-------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF 407 (501)
Q Consensus 337 --~~v~~v~~~~~~~~l~s~s-------~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~ 407 (501)
..|..-..++++++++..+ -.|.+.+|....+ .-+.+.+|......+.. +|. +....+++-+..
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~--~g~----~~~~~lf~fa~r 221 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM--EGN----AEESTLFCFAVR 221 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEEC--TTC----SSEEEEEEEEEC
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEec--CCC----CCCceEEEEEEe
Confidence 3567777889999876443 2467888987644 33445666554444432 221 111224444443
Q ss_pred C---CeEEEEeCCCC---e-----EEEEe--e--CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CC
Q 010794 408 D---STVKLWDVELG---K-----LLYSL--N--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NG 471 (501)
Q Consensus 408 d---g~i~iwd~~~~---~-----~~~~~--~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~ 471 (501)
. +.++|.++... . ....+ . .-.+.--++..|+.-..+..-+.-|.|++||+.+|.++..-.- ..
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~ 301 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC
Confidence 3 67888887432 1 11111 0 1123345677777777777888999999999999987654432 23
Q ss_pred CEEEEEECCCCCEEEEEECCCeEE
Q 010794 472 GIFEVCWNKEGDKIAACFANHTVC 495 (501)
Q Consensus 472 ~i~~~~ws~~g~~la~~~~d~~v~ 495 (501)
.|+..+-+....-+++-...|.|.
T Consensus 302 ~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 302 TIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEE
T ss_pred ceEEecccCCCCcEEEEccCceEE
Confidence 455545444444444444555543
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.87 E-value=0.57 Score=43.03 Aligned_cols=225 Identities=13% Similarity=0.133 Sum_probs=106.5
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCceeEeecCCCCC--EEEEEecCCCCEEEEEec----C-----CeEEEEeCCCcc
Q 010794 222 GEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSC----D-----KTAIVWDVKTEE 286 (501)
Q Consensus 222 ~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~--V~~l~~~~~~~~l~s~s~----D-----~~i~iwd~~~~~ 286 (501)
-++.+++.||.+ ..+.++|.....-..+..-..+ -.+++.. ++..++.|+. + ..+.+||+.+..
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 355677777642 3677888765433222111110 0112211 4555566655 2 468899998887
Q ss_pred eeEeeeeccCC-eEEEecCCCceEEEecCC-----CeEEEEEcCCCcce--eeecCCCCceeEEEEcCCCCEEEEEeCC-
Q 010794 287 WKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDD- 357 (501)
Q Consensus 287 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~D- 357 (501)
|...-...... -..+...++..++.++.+ ..+.+++..+..-. ..+......-.++.+ ++++++.|+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 179 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDG 179 (308)
T ss_dssp EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCC
Confidence 76542211110 011112244455555422 35677776554211 111111111122222 67777777765
Q ss_pred ----CeEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEE--E
Q 010794 358 ----VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLY--S 424 (501)
Q Consensus 358 ----g~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~--~ 424 (501)
..+.+||..+..... .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-.. .
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~---------~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HN---------CIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT---------EEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CC---------EEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 357888887654322 11111111111221 22 245555543 468889987764221 1
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010794 425 LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 462 (501)
Q Consensus 425 ~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 462 (501)
+.........+.+ ++++++.||.+ ..|.+||+.+.+
T Consensus 249 ~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 249 MKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1111112222333 56777777754 357888887654
No 327
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.77 E-value=0.81 Score=41.53 Aligned_cols=220 Identities=13% Similarity=0.027 Sum_probs=109.7
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 214 DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
.|..++-.....+++ . ||.++.|-.+. ++-.. ......|..++..... .++. . ||.|..|-..........
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p-~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMP-AATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCC-GGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCC-ccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 455665544333333 4 89999996542 21110 1112345666554332 3333 4 899999965432111100
Q ss_pred eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q 010794 292 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 371 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 371 (501)
......+..+..-....++.. ++.|+.|-......+-........|..++......++ -. ||.|..|-......+
T Consensus 98 ~~~~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gql 172 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQT 172 (282)
T ss_dssp GGGSSSEEEEEEETTEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTSTT
T ss_pred cccCCCeEEEECcCCEEEEEe--CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCCC
Confidence 011224555555445555554 8999999765432211111122356667665433222 23 799999976543222
Q ss_pred eecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCC
Q 010794 372 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 451 (501)
Q Consensus 372 ~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 451 (501)
..-......|..|+..... .++. .||.|..|-....-.+-.-......|..|+-...-.++++ ||
T Consensus 173 g~p~~~~~~v~~i~~G~~h----------s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g 237 (282)
T 3qhy_B 173 TVPAEAQSGVDDVAGGIFH----------SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NG 237 (282)
T ss_dssp SCCGGGGSSEEEEEECSSE----------EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TT
T ss_pred CCceecCCCeEEEEecCCE----------EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CC
Confidence 1111123456666654332 3444 4899999965432111110111234677776554333333 99
Q ss_pred cEEEEeCCC
Q 010794 452 SMHIWSLKE 460 (501)
Q Consensus 452 ~i~iw~~~~ 460 (501)
.|+.|=...
T Consensus 238 ~v~~wG~n~ 246 (282)
T 3qhy_B 238 KVIAWGSSR 246 (282)
T ss_dssp EEEEESTTC
T ss_pred EEEEecCCC
Confidence 999997654
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.55 E-value=0.48 Score=43.55 Aligned_cols=210 Identities=10% Similarity=0.095 Sum_probs=98.6
Q ss_pred CeEEEEeCCCcceeEeeeeccCC-eEEEecCCCceEEEecC----C-----CeEEEEEcCCCcc--eeeecCCCCceeEE
Q 010794 275 KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSST----D-----NMIYVCKIGENRP--IKTFAGHQGEVNCV 342 (501)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----d-----~~i~~~~~~~~~~--~~~~~~h~~~v~~v 342 (501)
..+.+||+.+.+|...-...... -..+...++..++.++. + ..+++++..+..- +..+........++
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 118 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 118 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE
Confidence 35788888887776532111110 01112224455555543 2 3567777655431 11111111111222
Q ss_pred EEcCCCCEEEEEeCC-----CeEEEEeCCCCceee--ecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-----Ce
Q 010794 343 KWDPTGSLLASCSDD-----VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----ST 410 (501)
Q Consensus 343 ~~~~~~~~l~s~s~D-----g~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-----g~ 410 (501)
.+ ++++++.|+.+ ..+.+||..+.+... .+.........+.+ ++ .+++.|+.+ ..
T Consensus 119 ~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~---------~iyv~GG~~~~~~~~~ 185 (308)
T 1zgk_A 119 VI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR---------LLYAVGGFDGTNRLNS 185 (308)
T ss_dssp EE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT---------EEEEECCBCSSCBCCC
T ss_pred EE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC---------EEEEEeCCCCCCcCce
Confidence 22 67777777644 357788887654322 11111111111221 22 244455543 45
Q ss_pred EEEEeCCCCeEEE--EeeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--EecCCCEEEEEECCC
Q 010794 411 VKLWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTGNGGIFEVCWNKE 481 (501)
Q Consensus 411 i~iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~~~~i~~~~ws~~ 481 (501)
+.+||+.+.+=.. .+.........+.+ ++++++.||.+ ..+.+||+.+.+-... ++....-.+++. -+
T Consensus 186 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 262 (308)
T 1zgk_A 186 AECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQ 262 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ET
T ss_pred EEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-EC
Confidence 8888887654221 11111112233333 66777777765 5699999987653322 211111112222 25
Q ss_pred CCEEEEEECC-----CeEEEEEee
Q 010794 482 GDKIAACFAN-----HTVCVLDFR 500 (501)
Q Consensus 482 g~~la~~~~d-----~~v~v~~~~ 500 (501)
+++++.|+.+ ..|.+||..
T Consensus 263 ~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 263 GRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETT
T ss_pred CEEEEEcCcCCCcccceEEEEcCC
Confidence 6777777644 356777753
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.48 E-value=2.5 Score=46.92 Aligned_cols=195 Identities=12% Similarity=0.201 Sum_probs=114.6
Q ss_pred ecCCCCEEEEEecCCeEEEEeCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcC-CCcceeeecCCC---
Q 010794 261 WNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQ--- 336 (501)
Q Consensus 261 ~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~--- 336 (501)
.||..+.++.=+ ..++.|+|+.+......+.... +|.=-.|.+...++.. ++..|+.|++. ...|++.|.-|.
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~ 149 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLA 149 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCeeEEE-cCCeEEEeccCCCCccHHHHhcchhcc
Confidence 577766555443 6899999999887777666543 4444566555544333 34579999996 346777777663
Q ss_pred -CceeEEEEcCCCCEEEEEe-------CCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC-
Q 010794 337 -GEVNCVKWDPTGSLLASCS-------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF- 407 (501)
Q Consensus 337 -~~v~~v~~~~~~~~l~s~s-------~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~- 407 (501)
..|..-..+++.++++..| -.|.+.+|....+. -+.+.+|......+.. +|.. ....+++-+..
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~--~~~~----~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKM--EGNA----EESTLFCFAVRG 222 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheecc--CCCC----CCceEEEEEEec
Confidence 4566777788999876443 34778888865432 2334555544333322 1111 11113332222
Q ss_pred --CCeEEEEeCCCC---eEEEEe-------e--CCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010794 408 --DSTVKLWDVELG---KLLYSL-------N--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 465 (501)
Q Consensus 408 --dg~i~iwd~~~~---~~~~~~-------~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 465 (501)
.+.++|.++... ...+.. . .-...--++..|+.-..+..-+.-|.|++||+.+|..+.
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 267888877432 111110 0 011222345666666667777788999999999997653
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.33 E-value=1.2 Score=41.03 Aligned_cols=171 Identities=12% Similarity=0.120 Sum_probs=80.9
Q ss_pred eEEEEeCCCcceeEeeeec---cCCeEEEecCCCceEEEecC----CC-------eEEEEEcCCCccee--eecCCCCce
Q 010794 276 TAIVWDVKTEEWKQQFEFH---SGPTLDVDWRNNVSFATSST----DN-------MIYVCKIGENRPIK--TFAGHQGEV 339 (501)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----d~-------~i~~~~~~~~~~~~--~~~~h~~~v 339 (501)
.+.+||+.+.+|... ... ...-.++...++..++.++. ++ .++.++..+..-.. .+.......
T Consensus 25 ~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 478899998888662 211 11122333445556666652 11 16667765432111 111111111
Q ss_pred eEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeee--cccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeC---
Q 010794 340 NCVKWDPTGSLLASCSDD-------VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASF--- 407 (501)
Q Consensus 340 ~~v~~~~~~~~l~s~s~D-------g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~--- 407 (501)
..+.+ ++++++.|+.+ ..+.+||..+.+.... +.........+. .++ . +++.|+.
T Consensus 104 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~--------~-iyv~GG~~~~ 170 (318)
T 2woz_A 104 GLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNG--------M-IYCLGGKTDD 170 (318)
T ss_dssp EEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETT--------E-EEEECCEESS
T ss_pred ceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECC--------E-EEEEcCCCCC
Confidence 12222 56777777754 2477888876543321 111000011111 122 2 3344442
Q ss_pred ---CCeEEEEeCCCCeEEEE--eeCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010794 408 ---DSTVKLWDVELGKLLYS--LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 462 (501)
Q Consensus 408 ---dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 462 (501)
-..+.+||+.+.+=... +.........+.+ ++++++.||.+ ..+.+||+.+.+
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 23588899887642211 1111111223333 56777777754 357789988764
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.20 E-value=1.9 Score=41.26 Aligned_cols=138 Identities=15% Similarity=0.281 Sum_probs=84.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeecccC----CCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--
Q 010794 347 TGSLLASCSDDVTAKIWNMKQDKYVHDLREH----SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-- 420 (501)
Q Consensus 347 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~----~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-- 420 (501)
+|.-++.+- ++.||.-++......+.+... -..+..+..+|+|. +||.. .+..|.|-.+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~---------lLAl~-g~~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD---------LLCLF-NDNEIFVMEVPWGYSN 99 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS---------EEEEE-CSSEEEEEECCTTCSC
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC---------EEEEe-cCCeEEEEEecCcccc
Confidence 344443332 356777676643333343332 22567788899986 55554 45678888776221
Q ss_pred ----------EE--EEeeC----CCCCeEEEEECCCC---CEEEEEeCCCcEEEEeCCCCe-eEEEEe------c----C
Q 010794 421 ----------LL--YSLNG----HREPVYSLAFSPTG---EYLASGSLDKSMHIWSLKEGK-IVKTYT------G----N 470 (501)
Q Consensus 421 ----------~~--~~~~~----h~~~v~~l~~spdg---~~lasgs~Dg~i~iw~~~~~~-~~~~~~------~----~ 470 (501)
.. +.+.. ...+|..+.|||-| ..|++-..|+.|++||+.... ....+. + .
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARV 179 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSC
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCccc
Confidence 11 22221 24679999999964 689999999999999998632 111221 1 1
Q ss_pred CCEEEEEECCCCCEEEEEE--CCCeEE
Q 010794 471 GGIFEVCWNKEGDKIAACF--ANHTVC 495 (501)
Q Consensus 471 ~~i~~~~ws~~g~~la~~~--~d~~v~ 495 (501)
..+.++||.++|-.|.+.+ .+|-|+
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 3578999999887666644 667664
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.14 E-value=1.9 Score=39.56 Aligned_cols=140 Identities=11% Similarity=0.079 Sum_probs=64.5
Q ss_pred EEEEEeCCCeEEEEECCCceeEe--ecC-CCCCEEEEEecCCCCEEEEEec----CC-------eEEEEeCCCcceeEee
Q 010794 226 LLATGSYDGQARIWSTNGDLKCT--LSK-HKGPIFSLKWNKKGDYLLTGSC----DK-------TAIVWDVKTEEWKQQF 291 (501)
Q Consensus 226 ~l~sg~~dg~i~iw~~~~~~~~~--~~~-h~~~V~~l~~~~~~~~l~s~s~----D~-------~i~iwd~~~~~~~~~~ 291 (501)
+++.|+. .+.+||.....-.. +.. ....-.+++ ..++..++.|+. ++ .+.+||+.+.+|...-
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 36778876543222 111 111122332 345666777763 12 2778899888876532
Q ss_pred eeccCC-eEEEecCCCceEEEecCC-------CeEEEEEcCCCccee--eecCCCCceeEEEEcCCCCEEEEEeCC----
Q 010794 292 EFHSGP-TLDVDWRNNVSFATSSTD-------NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDD---- 357 (501)
Q Consensus 292 ~~~~~~-~~~~~~~~~~~~~~~~~d-------~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~D---- 357 (501)
...... ...+...++..++.++.+ ..+.+++..+.+=.. .+......- +++. .++++++.|+.+
T Consensus 95 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSC
T ss_pred CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCC
Confidence 211110 111222244555555432 246667765542111 111000011 1222 367777777642
Q ss_pred --CeEEEEeCCCCce
Q 010794 358 --VTAKIWNMKQDKY 370 (501)
Q Consensus 358 --g~i~iwd~~~~~~ 370 (501)
..+.+||..+...
T Consensus 173 ~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 173 CTNRVFIYNPKKGDW 187 (318)
T ss_dssp BCCCEEEEETTTTEE
T ss_pred ccceEEEEcCCCCEE
Confidence 3588899877643
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.75 E-value=0.98 Score=42.07 Aligned_cols=188 Identities=12% Similarity=0.134 Sum_probs=100.9
Q ss_pred CEEEEEeCCCeEEEEECC-CceeEeecCC-CCCEEEEEec--CCCCEEEEE--ecCCeEEEEeCCCcceeEeeeec----
Q 010794 225 TLLATGSYDGQARIWSTN-GDLKCTLSKH-KGPIFSLKWN--KKGDYLLTG--SCDKTAIVWDVKTEEWKQQFEFH---- 294 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~-~~~~~~~~~h-~~~V~~l~~~--~~~~~l~s~--s~D~~i~iwd~~~~~~~~~~~~~---- 294 (501)
.+++.++.||.|.-.|.. ++....+... ..++....-. +.+..++.+ +.||.|..++..++.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 367888999999988864 5555555432 1233222111 112244433 68999999999888554333211
Q ss_pred cCCeEE-----E-ec---CCCceEEEecCCCeEEEEEcCCCcceeeecCCC--Cc-----eeEEEEc-----CCCCEEEE
Q 010794 295 SGPTLD-----V-DW---RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ--GE-----VNCVKWD-----PTGSLLAS 353 (501)
Q Consensus 295 ~~~~~~-----~-~~---~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~--~~-----v~~v~~~-----~~~~~l~s 353 (501)
..|... + +. ..+..+.+++.++.++..+..+++.+..+.... +. ..|.... -.+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 111211 0 00 145567788899999999999999888775321 11 1122211 12356777
Q ss_pred EeCCCeEEEEeCCCCceeeecccCCCCEEEEEEcCCCCC-------CCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE
Q 010794 354 CSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSG-------TNNPNQQLILASASFDSTVKLWDVELGKLLY 423 (501)
Q Consensus 354 ~s~Dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~-------~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~ 423 (501)
+..+..+.+.+ ++++ +-.+. --.|.+.... ....+.. + +.++.||.|.-+|..+|..++
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~-------~s~~~~~~~~~~~~~~~~~s~Dg~-~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVT-------YSTWQQNVLDVPLALQNTFSKDGM-C-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCE-------EEEEECCTTTHHHHTTCSSCSSSC-C-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEe-------cccccccccccccccccccccCCc-E-EEECCCCEEEEEECCCCcEEE
Confidence 77777777666 3332 21111 1112221110 0000112 2 347889999999999999887
No 334
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.73 E-value=1.7 Score=37.48 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=55.5
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee---e--c--ccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeE
Q 010794 339 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH---D--L--REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 411 (501)
Q Consensus 339 v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~---~--~--~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i 411 (501)
..++.|.|+|.+.++ .||.|.-++-.+...-. . . ..--..+..|.+.|+|. |.... |+.+
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~----------Lyav~-dg~l 156 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY----------LYAVH-GQQF 156 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC----------EEEEE-TTEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce----------EEEEe-CCcE
Confidence 467899999998888 45888777653221110 0 0 11114678999999995 44444 7775
Q ss_pred EEEeCCCCe------EEEEee-CCCCCeEEEEECCCCCEEEEEeCCCc
Q 010794 412 KLWDVELGK------LLYSLN-GHREPVYSLAFSPTGEYLASGSLDKS 452 (501)
Q Consensus 412 ~iwd~~~~~------~~~~~~-~h~~~v~~l~~spdg~~lasgs~Dg~ 452 (501)
+-+...++. ....+. .....-.-+.|.|+|.+.+.. ++.
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 433322111 011111 222234456788988877665 653
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.05 E-value=6.8 Score=41.00 Aligned_cols=266 Identities=9% Similarity=0.072 Sum_probs=145.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCceeEeecC------CCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCc
Q 010794 212 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 285 (501)
Q Consensus 212 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~------h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~ 285 (501)
...|.++....+|.+.+ |... -+..++........+.. ....|.++...+++..|..|+. +-+..+|..++
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 34688888888887665 4444 46677765543322211 1224888887777765555554 45888998776
Q ss_pred ceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecC--------CCCceeEEEEcCCCCEEEEEeCC
Q 010794 286 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG--------HQGEVNCVKWDPTGSLLASCSDD 357 (501)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s~s~D 357 (501)
............+.++....+..+..++. +-+.+++...... ..+.. ....|.++....+|.+-+ |+..
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~ 298 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDY 298 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCTTSCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESS
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCC
Confidence 55432222223345554444444444443 4567776654332 22211 124588888887777544 4455
Q ss_pred CeEEEEeCCCCceeeecc-----cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeC---
Q 010794 358 VTAKIWNMKQDKYVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNG--- 427 (501)
Q Consensus 358 g~i~iwd~~~~~~~~~~~-----~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~--- 427 (501)
| +.++.....-...... .....|.++.-..+|. +++ |+.+| +..++..++. ....+..
T Consensus 299 G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~--------lWi--Gt~~G-l~~~~~~~~~~~~~~~~~~~~~ 366 (758)
T 3ott_A 299 G-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGF--------YWF--GGANG-LIRFTDPAGERHDAIWYRMGDK 366 (758)
T ss_dssp S-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCC--------EEE--EETTE-EEEESCTTSSCCCCEEECTTCS
T ss_pred c-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCC--------EEE--eeCCc-ceeecccccccceeEEeccCCc
Confidence 6 5444322111010110 1124577777666664 333 44455 5566655421 1111110
Q ss_pred ----CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE--e-----cCCCEEEEEECCCCCEEEEEECCCeEEE
Q 010794 428 ----HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY--T-----GNGGIFEVCWNKEGDKIAACFANHTVCV 496 (501)
Q Consensus 428 ----h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~--~-----~~~~i~~~~ws~~g~~la~~~~d~~v~v 496 (501)
....|.++.-.++|.+-+ |+ ++-|..|+..+++..... . ....|.++.-.++|+.. .|...+.|.+
T Consensus 367 ~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl~~ 443 (758)
T 3ott_A 367 TYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLW-ISTCLGGIFV 443 (758)
T ss_dssp SSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEE-EEESSSCEEE
T ss_pred CCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEE-EEECCCceEE
Confidence 123589999888887655 33 456999999887654322 1 12347888887877644 4555555777
Q ss_pred EE
Q 010794 497 LD 498 (501)
Q Consensus 497 ~~ 498 (501)
+|
T Consensus 444 ~~ 445 (758)
T 3ott_A 444 VD 445 (758)
T ss_dssp EE
T ss_pred Ec
Confidence 65
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.97 E-value=4.7 Score=44.82 Aligned_cols=203 Identities=15% Similarity=0.221 Sum_probs=118.8
Q ss_pred EECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q 010794 160 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 239 (501)
Q Consensus 160 ~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~dg~i~iw 239 (501)
-.+|..+.||--+ ..++.|+++.+....+. +. -..+|..-.|-....+-+.+ +..|.-|
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks----------------~~--~~e~VvfWkWis~~~l~lVT--~~aVyHW 130 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKA----------------HT--MTDDVTFWKWISLNTVALVT--DNAVYHW 130 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhcc----------------cc--cCCCceEEEecCCCeeEEEc--CCeEEEe
Confidence 3577777776554 57899999876432211 10 13457777786655443332 3579999
Q ss_pred ECCC--ceeEeecCC----CCCEEEEEecCCCCEEEEEe-------cCCeEEEEeCCCcceeEeeeeccCCeEEEecC--
Q 010794 240 STNG--DLKCTLSKH----KGPIFSLKWNKKGDYLLTGS-------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-- 304 (501)
Q Consensus 240 ~~~~--~~~~~~~~h----~~~V~~l~~~~~~~~l~s~s-------~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-- 304 (501)
+..+ .+...|..| ...|..-+-+++.++++..+ -.|.+.+|....+ ..+.+.+|.+.-..+...
T Consensus 131 ~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~ 209 (1630)
T 1xi4_A 131 SMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGN 209 (1630)
T ss_pred ccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCC
Confidence 9865 233344444 34566677788888876433 3477888876543 344455555443332221
Q ss_pred --CCceEEEe---cCCCeEEEEEcCCC----c-----ceeeecCC---CCceeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 010794 305 --NNVSFATS---STDNMIYVCKIGEN----R-----PIKTFAGH---QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 367 (501)
Q Consensus 305 --~~~~~~~~---~~d~~i~~~~~~~~----~-----~~~~~~~h---~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~ 367 (501)
+...|+.+ ...+.+++.+++.. . .+..+... ..-..++..++....+..-+.-|.|.+||+.+
T Consensus 210 ~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 210 AEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred CCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc
Confidence 11223222 22368888888653 1 11111111 22344677888888888889999999999999
Q ss_pred CceeeecccCCCCEEEE
Q 010794 368 DKYVHDLREHSKEIYTI 384 (501)
Q Consensus 368 ~~~~~~~~~~~~~v~~i 384 (501)
+.++..-+-...+|...
T Consensus 290 ~~~i~~~ris~~~iF~~ 306 (1630)
T 1xi4_A 290 GTCIYMNRISGETIFVT 306 (1630)
T ss_pred chhhhhccccCCceEEe
Confidence 98775544334444433
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.90 E-value=1 Score=42.31 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=19.0
Q ss_pred cEEEEeCCCCe--eEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010794 452 SMHIWSLKEGK--IVKTYTGNGGIFEVCWNKEGDKIAACFAN 491 (501)
Q Consensus 452 ~i~iw~~~~~~--~~~~~~~~~~i~~~~ws~~g~~la~~~~d 491 (501)
.+.+||+.+.+ .+..++... ....+...++++++.|+.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGR-AYGVSLPWNNSLLIIGGET 326 (357)
T ss_dssp CCEEEECC---CEEEEECSSCC-BSSEEEEETTEEEEEEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCc-ccceeEEeCCEEEEEeeeC
Confidence 57889987654 333332211 1122223467778888754
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.47 E-value=3 Score=43.23 Aligned_cols=191 Identities=10% Similarity=0.071 Sum_probs=94.6
Q ss_pred CCCCEEEEEecC----CeEEEEeCCCcceeEee-ee-----ccC-CeEEEecC--CCceEEEecCC------CeEEEEEc
Q 010794 263 KKGDYLLTGSCD----KTAIVWDVKTEEWKQQF-EF-----HSG-PTLDVDWR--NNVSFATSSTD------NMIYVCKI 323 (501)
Q Consensus 263 ~~~~~l~s~s~D----~~i~iwd~~~~~~~~~~-~~-----~~~-~~~~~~~~--~~~~~~~~~~d------~~i~~~~~ 323 (501)
.++..++.|+.+ ..+.+||+.+..|...- .. ... .-.+.... ++..++.++.+ +.+++++.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345566666643 46889999988876644 21 110 01122222 55556665432 24667776
Q ss_pred CCCcc--eeeecCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeee-----cccCCCCEEEEEEcCCCCCCC
Q 010794 324 GENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDV--TAKIWNMKQDKYVHD-----LREHSKEIYTIRWSPTGSGTN 394 (501)
Q Consensus 324 ~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg--~i~iwd~~~~~~~~~-----~~~~~~~v~~i~~~p~g~~~~ 394 (501)
.+..= +..+.... .-.+++...++++++.|+.++ .+.+||..+...... +........++.+....
T Consensus 476 ~t~~W~~~~~~p~~R-~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~---- 550 (695)
T 2zwa_A 476 KTREWSMIKSLSHTR-FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVS---- 550 (695)
T ss_dssp TTTEEEECCCCSBCC-BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTT----
T ss_pred CCCcEEECCCCCCCc-ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCC----
Confidence 65321 11111111 111233324788888888765 688999877654321 11111111112322220
Q ss_pred CCCCcEEEEEEeC--C-----CeEEEEeCCCCe--------EEEEee-CCCCCeEEEEECCCCCEEEEEeC--------C
Q 010794 395 NPNQQLILASASF--D-----STVKLWDVELGK--------LLYSLN-GHREPVYSLAFSPTGEYLASGSL--------D 450 (501)
Q Consensus 395 ~~~~~~~l~sgs~--d-----g~i~iwd~~~~~--------~~~~~~-~h~~~v~~l~~spdg~~lasgs~--------D 450 (501)
+. +++.|+. + +.+.+||+.+.. .+.... ..+.....+.+ .++.+++.||. .
T Consensus 551 ---~~-iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 625 (695)
T 2zwa_A 551 ---KQ-GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRT 625 (695)
T ss_dssp ---TE-EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTT
T ss_pred ---CE-EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCC
Confidence 12 4444554 2 458889987765 111111 11112223333 33677777774 3
Q ss_pred CcEEEEeCCCCee
Q 010794 451 KSMHIWSLKEGKI 463 (501)
Q Consensus 451 g~i~iw~~~~~~~ 463 (501)
..|.+||+.+.+-
T Consensus 626 ~~v~~yd~~t~~W 638 (695)
T 2zwa_A 626 NSIISLDPLSETL 638 (695)
T ss_dssp TSEEEEETTTTEE
T ss_pred CeEEEEECCCCeE
Confidence 4699999988754
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.43 E-value=4.7 Score=37.12 Aligned_cols=235 Identities=12% Similarity=0.150 Sum_probs=125.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCC-cceeEeeeeccC-
Q 010794 219 DWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSG- 296 (501)
Q Consensus 219 ~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~- 296 (501)
-.+|..+.+|--. ..++.|++++.+.+..-.....+|.--+|-.....-+.. +..|.-|++.. ....+.|..|..
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT--~taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE--SSEEEEEESSTTCCCEEEEECCGGG
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc--CCcEEEEcccCCCCCceeeecchhc
Confidence 3467767666655 678999999876554333345678888887655432322 46899999864 345566665543
Q ss_pred ---CeEEEecC--CCceEEEec--C----CCeEEEEEcCCCcceeeecCCCCceeEEEEcCC---CCEEEEEeC---CCe
Q 010794 297 ---PTLDVDWR--NNVSFATSS--T----DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT---GSLLASCSD---DVT 359 (501)
Q Consensus 297 ---~~~~~~~~--~~~~~~~~~--~----d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~---Dg~ 359 (501)
.+...... ....++.+- . .|.+.+|.... +.-+.+.||.+....+.+.-+ .++|+.+.. .++
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 22222222 222333221 2 24566676643 334566777655433332211 123333332 257
Q ss_pred EEEEeCCCC-ceeeecccCCCCEEEEEEcCCCCCCCCC------CCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCe
Q 010794 360 AKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNP------NQQLILASASFDSTVKLWDVELGKLLYSLNGHREPV 432 (501)
Q Consensus 360 i~iwd~~~~-~~~~~~~~~~~~v~~i~~~p~g~~~~~~------~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v 432 (501)
++|-++... .-- .........+-|.|+....+ | ...-++..-..-|.|.+||+.++.+++.-+-...+|
T Consensus 229 LhIiEi~~~~~~~---~~f~kk~vdi~fppea~~DF-PVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~i 304 (365)
T 2xzh_A 229 LHIIEVGTPPTGN---QPFPKKAVDVFFPPEAQNDF-PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 304 (365)
T ss_dssp EEEEECSSCCTTC---CCCCCEEEEECCCTTCTTCC-EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEEEEcCCCCCCC---CCcccccceeeCCccccCCc-eEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCce
Confidence 888887432 000 11122234444544422111 0 001134455678999999999999998877666666
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 433 YSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 433 ~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
..-+.+....-++.....|.|.--.+.+.
T Consensus 305 F~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 305 FVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 55554444334444445555555444443
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.16 E-value=9.5 Score=39.87 Aligned_cols=312 Identities=11% Similarity=0.091 Sum_probs=164.4
Q ss_pred cceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCCCCEEEEEeCC
Q 010794 154 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 233 (501)
Q Consensus 154 ~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~~~~l~sg~~d 233 (501)
..|.++...++|.+.+ |+..| |..++..++.. ... ............|.++....++..|..|..
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~-----------~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKF-----------EGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE-EEEEETTTTEE-----------EEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred CeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCce-----------EEe-cCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 4588888888887665 44444 66677544321 000 000000111234888888777665445553
Q ss_pred CeEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee-------ccCCeEEEecCC
Q 010794 234 GQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-------HSGPTLDVDWRN 305 (501)
Q Consensus 234 g~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~ 305 (501)
+-+..++........+. -....|.++...++|...+ |+. +-+.+++..+..+...... ....+.++....
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~ 288 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQ 288 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECT
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcC
Confidence 45777886654332221 1234578888777776544 444 4588888877654322111 112344444433
Q ss_pred CceEEEecCCCeEEEEEcCCCcceeeec-------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeecc-
Q 010794 306 NVSFATSSTDNMIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDLR- 375 (501)
Q Consensus 306 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~--~~~~~- 375 (501)
...+-.+...| +.+.... .....+. .....|.++.-..+|.+-+ |+.+| +..++..++.. ...+.
T Consensus 289 ~g~lWiGT~~G-l~~~~~~--~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~ 363 (758)
T 3ott_A 289 EHNIWLGTDYG-ISLSRYN--SALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRM 363 (758)
T ss_dssp TCCEEEEESSS-EEEECCC--C-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECT
T ss_pred CCCEEEEeCCc-ccccccC--CceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEecc
Confidence 33344444445 3333221 1111111 1124588888888887654 44555 55566544211 11111
Q ss_pred ------cCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eC-----CCCCeEEEEECCCCCE
Q 010794 376 ------EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NG-----HREPVYSLAFSPTGEY 443 (501)
Q Consensus 376 ------~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~-----h~~~v~~l~~spdg~~ 443 (501)
.....|.++.-..+|. +++ |+ ++-|..||..+++...-. .. ....|.++...++|.+
T Consensus 364 ~~~~~~l~~~~v~~i~~d~~g~--------lWi--gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 432 (758)
T 3ott_A 364 GDKTYPLSHNRIRHIYEDKEQQ--------LWI--AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQL 432 (758)
T ss_dssp TCSSSCCSCSCEEEEEECTTSC--------EEE--EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEE
T ss_pred CCcCCCCCCCceEEEEECCCCC--------EEE--Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCE
Confidence 1123577777666653 344 44 356889998877654321 11 1245889988888765
Q ss_pred EEEEeCCCcEEEEeCCC------CeeE--EEEec-----CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010794 444 LASGSLDKSMHIWSLKE------GKIV--KTYTG-----NGGIFEVCWNKEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 444 lasgs~Dg~i~iw~~~~------~~~~--~~~~~-----~~~i~~~~ws~~g~~la~~~~d~~v~v~~~ 499 (501)
.+ |+..+-|.+++..+ +... ..+.. ...|.++.-.++|+.-++++..+.|..||.
T Consensus 433 Wi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~ 500 (758)
T 3ott_A 433 WI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINP 500 (758)
T ss_dssp EE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEET
T ss_pred EE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeC
Confidence 54 55555688887542 1121 12211 224888999999987664443455777764
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.77 E-value=7.7 Score=37.77 Aligned_cols=102 Identities=10% Similarity=0.157 Sum_probs=56.6
Q ss_pred CEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee--------ccCCeEEEecCC-----CceEEEecC-------
Q 010794 255 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--------HSGPTLDVDWRN-----NVSFATSST------- 314 (501)
Q Consensus 255 ~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~-----~~~~~~~~~------- 314 (501)
..++|+|.|+|..+++-...+.|++++..++........ .....+.+.+.+ ...+++.+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 457999999998666654445788887655543222111 123345666653 334444332
Q ss_pred -----CCeEEEEEcCCC-------ccee-eec-CCCCceeEEEEcCCCCEEEEEeC
Q 010794 315 -----DNMIYVCKIGEN-------RPIK-TFA-GHQGEVNCVKWDPTGSLLASCSD 356 (501)
Q Consensus 315 -----d~~i~~~~~~~~-------~~~~-~~~-~h~~~v~~v~~~~~~~~l~s~s~ 356 (501)
...|..++.... +.+. .+. +..+....|+|.|||.++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 1111 122 12235788999999998887654
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.38 E-value=7.1 Score=36.41 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=62.5
Q ss_pred EEccCCccceeEEEECCCCCEEEEEECCCcEEEEecCCCCCCCCCCCCCceEEEEEeeccccccCCCCeEEEEECCC---
Q 010794 147 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE--- 223 (501)
Q Consensus 147 ~~l~~H~~~V~~~~~sp~~~~l~sgs~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~~--- 223 (501)
.++...-.....|+|.|+|.++++--..|.|++++..++.. ..+..+.............|+|+|+
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-----------~~v~~~~~v~~~g~~GllGia~~Pdf~~ 93 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-----------TELGEVPGVSPSGEGGLLGIALSPDYAS 93 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----------EEEEECTTCCCBTTBSEEEEEECTTHHH
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-----------eeecccCceeecCCCCceeeEecccccc
Confidence 33444445578999999999888776689999887543321 1111111111122346789999995
Q ss_pred CCEEEEE-e--CCCeEEEEECCC---------ceeE---ee---cCCCCCEEEEEecCCCCEEEEEe
Q 010794 224 GTLLATG-S--YDGQARIWSTNG---------DLKC---TL---SKHKGPIFSLKWNKKGDYLLTGS 272 (501)
Q Consensus 224 ~~~l~sg-~--~dg~i~iw~~~~---------~~~~---~~---~~h~~~V~~l~~~~~~~~l~s~s 272 (501)
..+|+.. + .++.|.-|.... .... .+ ..|.. ..|.|.|+|..+++.+
T Consensus 94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g--~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNG--GRIAFGPDKMLYAGTG 158 (347)
T ss_dssp HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCC--CCEEECTTSCEEEECB
T ss_pred CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccC--ccccCCCCCCEEEEEC
Confidence 3444432 2 233444444332 1111 12 12433 4689999998666643
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.09 E-value=9.4 Score=37.22 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=56.5
Q ss_pred EEEEEecCCCC-EEEEEecCCeEEEEeCCCcc---eeEeee--e-------ccCCeEEEecCCC-----ceEEEec--CC
Q 010794 256 IFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEE---WKQQFE--F-------HSGPTLDVDWRNN-----VSFATSS--TD 315 (501)
Q Consensus 256 V~~l~~~~~~~-~l~s~s~D~~i~iwd~~~~~---~~~~~~--~-------~~~~~~~~~~~~~-----~~~~~~~--~d 315 (501)
-+.|+|.|++. .|+.+...|.|++++..... .+..+. . .....+.+.+.++ ..+++-+ .+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 47899999996 56667788999999754321 111110 0 0233556666653 3333322 11
Q ss_pred ----------CeEEEEEcCCC----------cceeeec--CCCCceeEEEEcCCCCEEEEEeCCC
Q 010794 316 ----------NMIYVCKIGEN----------RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDV 358 (501)
Q Consensus 316 ----------~~i~~~~~~~~----------~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~Dg 358 (501)
..|.-+.+... +.+..+. ........|+|.|||.++++.+..+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 13444555321 1222221 1223467899999999888776644
No 344
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.77 E-value=7.2 Score=35.15 Aligned_cols=181 Identities=15% Similarity=0.066 Sum_probs=90.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEee
Q 010794 214 DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 291 (501)
Q Consensus 214 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 291 (501)
.|..++-......++ . ||.|+.|-.+. ++-. -..-...|..++.... +.+.-. ||.|..|-..........
T Consensus 64 ~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~-P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTV-PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCC-CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCC-CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCC
Confidence 466666554433333 4 89999997542 2110 0111246777765543 333334 899999965432111111
Q ss_pred eeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q 010794 292 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 371 (501)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 371 (501)
......+..+..-....++.. ++.++.|-......+..-..-...|..|+...... ++. .||.|..|-......+
T Consensus 137 ~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYTALAVK--NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp GGGGSSEEEEEECSSEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTT
T ss_pred ccCCCCeEEEEcccCEEEEEE--CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCC
Confidence 111234555554444444443 68999997654322211111124566776654333 333 5999999976543222
Q ss_pred eecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010794 372 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 418 (501)
Q Consensus 372 ~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 418 (501)
..-......|..|+..... .++.. ||.|..|-...
T Consensus 212 g~p~~~~~~v~~i~~G~~h----------~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 212 TVPTEALSGVSAIASGEWY----------SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp CCCGGGGSSCCEEEECSSC----------EEEEE--TTEEEEESTTC
T ss_pred CCCcccCCCceEEEcCCCE----------EEEEE--CCEEEEecCCC
Confidence 1111112345555543322 23333 89999997654
No 345
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.53 E-value=10 Score=36.45 Aligned_cols=235 Identities=11% Similarity=0.136 Sum_probs=125.4
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecCCeEEEEeCCC-cceeEeeeeccC-
Q 010794 219 DWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSG- 296 (501)
Q Consensus 219 ~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~- 296 (501)
-.+|..+.++--. ..++.|++++.+.+..-.....+|.--+|-.... |.-.+ +..|.-|++.. ....+.|..|..
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~-l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTE-EEEEC-SSEEEEEESSSSCCCEEEEECCGGG
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCe-EEEEc-CCeeEEecccCCCCchhheecchhc
Confidence 3466666666554 6799999998765433222345676777865543 33222 56899999864 345566665543
Q ss_pred ---CeEEEecC--CCceEEEe--cC----CCeEEEEEcCCCcceeeecCCCCceeEEEEcCC---CCEEEEEeCC---Ce
Q 010794 297 ---PTLDVDWR--NNVSFATS--ST----DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT---GSLLASCSDD---VT 359 (501)
Q Consensus 297 ---~~~~~~~~--~~~~~~~~--~~----d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~D---g~ 359 (501)
.+...... ....++.| .. .|.+.+|.... +.-+.+.||.+....+...-+ ..+|+.+... +.
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 22222222 22233222 12 35566776644 334567788765544443211 1244444443 68
Q ss_pred EEEEeCCCCc-eeeecccCCCCEEEEEEcCCCCCCC------CCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCe
Q 010794 360 AKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTN------NPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPV 432 (501)
Q Consensus 360 i~iwd~~~~~-~~~~~~~~~~~v~~i~~~p~g~~~~------~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v 432 (501)
++|-++.... --. ........+-|.|+....+ ++. .-++..-..-|.|.+||+.++.+++.-+-...+|
T Consensus 228 Lhi~Ei~~~~~~~~---~f~kk~vdv~fppe~~~DFPvamqvs~k-ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQ---PFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp EEEEECSCCCTTCC---CCCCEEEECCCCTTSTTCCEEEEEEETT-TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEEEEcCCCccCCC---CccceeeeeeCCcccccCceeEEEeccc-CCEEEEEecCceEEEEecccceeeeeecccCCce
Confidence 8888874320 000 1112223333434322110 000 1134455678999999999999998877666666
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010794 433 YSLAFSPTGEYLASGSLDKSMHIWSLKEG 461 (501)
Q Consensus 433 ~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 461 (501)
..-+.+....-++.....|.|.--.+...
T Consensus 304 F~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 304 FVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEecccCCCCcEEEEccCceEEEEEEccc
Confidence 65555544444444455665555544443
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.37 E-value=2.9 Score=39.00 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=26.2
Q ss_pred CeEEEEeCCCcceeEeeeeccCC-e-EEEecCCCceEEEecC------CCeEEEEEc
Q 010794 275 KTAIVWDVKTEEWKQQFEFHSGP-T-LDVDWRNNVSFATSST------DNMIYVCKI 323 (501)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~------d~~i~~~~~ 323 (501)
..+.+||+.+..|...-...... . .++...++..++.++. ...++.+++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 57899999998887653322111 1 2222234555555542 234666665
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.58 E-value=9.9 Score=39.34 Aligned_cols=148 Identities=12% Similarity=0.128 Sum_probs=76.6
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCceeEeec-C-------CCCCEEEEEecC-CCCEEEEEecC------CeEEEEeC
Q 010794 222 GEGTLLATGSYD----GQARIWSTNGDLKCTLS-K-------HKGPIFSLKWNK-KGDYLLTGSCD------KTAIVWDV 282 (501)
Q Consensus 222 ~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~-~-------h~~~V~~l~~~~-~~~~l~s~s~D------~~i~iwd~ 282 (501)
.++.+++.||.+ ..+.+||.....-..+. . ....-.+++..+ ++..++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777777754 45777776543222222 1 000112222333 56666777654 35789999
Q ss_pred CCcceeEeeeeccC--CeEEEecCCCceEEEecCCC--eEEEEEcCCCcceee-----ecCCCCceeEEEEcCC-CCEEE
Q 010794 283 KTEEWKQQFEFHSG--PTLDVDWRNNVSFATSSTDN--MIYVCKIGENRPIKT-----FAGHQGEVNCVKWDPT-GSLLA 352 (501)
Q Consensus 283 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~~~~-----~~~h~~~v~~v~~~~~-~~~l~ 352 (501)
.+..|...-..... ....+.+.++..++.++.++ .+.+|+..+..=... +........++.+... +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 98877654222111 11122223555666665433 678888765431110 1111112233555555 67777
Q ss_pred EEeC--C-----CeEEEEeCCCCc
Q 010794 353 SCSD--D-----VTAKIWNMKQDK 369 (501)
Q Consensus 353 s~s~--D-----g~i~iwd~~~~~ 369 (501)
.|+. + ..+.+||+.+..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7775 2 358888987765
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.16 E-value=0.76 Score=45.45 Aligned_cols=89 Identities=13% Similarity=0.208 Sum_probs=61.1
Q ss_pred EEEEeCCC----Ce-EEEEeeCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCC------Cee-------EEEEecCC
Q 010794 411 VKLWDVEL----GK-LLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKE------GKI-------VKTYTGNG 471 (501)
Q Consensus 411 i~iwd~~~----~~-~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~------~~~-------~~~~~~~~ 471 (501)
|.+.|.+. +. .++.+. -......+.++|||++++.++ .+.++.++++.+ +++ +...+..-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 66677665 22 222222 223346788999999987765 588999999874 222 22333334
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010794 472 GIFEVCWNKEGDKIAACFANHTVCVLDFR 500 (501)
Q Consensus 472 ~i~~~~ws~~g~~la~~~~d~~v~v~~~~ 500 (501)
+....+|.++|+-..+.+.|..|.-||+.
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEecc
Confidence 68999999999766777899999999974
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.22 E-value=13 Score=33.88 Aligned_cols=235 Identities=7% Similarity=-0.006 Sum_probs=117.9
Q ss_pred CCCCEEEEEe--CCCeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEecC--------------CeEEEEeCCCc
Q 010794 222 GEGTLLATGS--YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD--------------KTAIVWDVKTE 285 (501)
Q Consensus 222 ~~~~~l~sg~--~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~D--------------~~i~iwd~~~~ 285 (501)
.++.+++-.. .++.|...+.++.....+... .+--+++++.+|+-+... ..|+..++...
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 3555555543 245666666666544444322 123457888888766542 35777777666
Q ss_pred ceeEeeeeccCCeEEEecCCCceEEEe---cCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeC-CCeEE
Q 010794 286 EWKQQFEFHSGPTLDVDWRNNVSFATS---STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAK 361 (501)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-Dg~i~ 361 (501)
+..... ..+...+....+..+.+. .....|+..++...... .+..+.. .+++|+++.|.-.+. ...|.
T Consensus 99 ~~~~l~---~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy 170 (302)
T 3s25_A 99 GSTVLD---PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQLY 170 (302)
T ss_dssp CCEEEE---CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCEE
T ss_pred cceEee---cCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceEE
Confidence 532221 222233444444444444 34556777777654433 3333322 345778888776654 56777
Q ss_pred EEeCCCCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCCCeEEEEeeCCCCCeEEEEECCC
Q 010794 362 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVELGKLLYSLNGHREPVYSLAFSPT 440 (501)
Q Consensus 362 iwd~~~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 440 (501)
.-++..+.....+. +... ..+.|.+. .+..+-..+ ..|..-++..+. ...+.. ..+ ..|+|+
T Consensus 171 ~~~l~g~~~~~l~~---~~~~-~~~~P~g~--------~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~ 233 (302)
T 3s25_A 171 RYDTASQSEALFYD---CNCY-KPVVLDDT--------NVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVY 233 (302)
T ss_dssp EEETTTTEEEEEEC---SCEE-EEEEEETT--------EEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEE
T ss_pred EEECCCCCEEEEeC---CCcc-ceeeecCC--------EEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEEC
Confidence 77776554322222 2222 23446664 222232222 356555655333 233332 233 347888
Q ss_pred CCEEEEEeC--CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEE
Q 010794 441 GEYLASGSL--DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACF 489 (501)
Q Consensus 441 g~~lasgs~--Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~ 489 (501)
+.+|.-++. .+.|..-++........... .+. .+++.+++|....
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKNDGTGFKELAKG--EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCCEEEEES--CEE--EEEECSSEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCCccEEeeCC--ccc--eEEEeCCEEEEEE
Confidence 888876533 34566666543322222222 122 3455666666554
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.07 E-value=13 Score=33.81 Aligned_cols=139 Identities=8% Similarity=0.012 Sum_probs=79.0
Q ss_pred EECCCCCEEEEEeCC--------------CeEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEEe----cCCeEEEE
Q 010794 219 DWNGEGTLLATGSYD--------------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS----CDKTAIVW 280 (501)
Q Consensus 219 ~~s~~~~~l~sg~~d--------------g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s----~D~~i~iw 280 (501)
-++++|.+|+-+... ..|+..++.+.....+.... +..|++++++|+-.. ....|..-
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 456778777766543 35677777765544443222 235677888887655 23445555
Q ss_pred eCCCcceeEeeeeccCCeEEEecCCCceEEEecCCCeEEEEEcCCCcceeeecCCCCceeEEEEcCCCCEEEEEeCCC--
Q 010794 281 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV-- 358 (501)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg-- 358 (501)
++..... +.+..+.. ..++|.....+.+......|++.++........+.+ ... ..++|++.+|+-....+
T Consensus 135 ~~dGs~~-~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 135 RIDGEEK-KKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp ETTSCCC-EEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTT
T ss_pred ECCCCCe-EEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCc
Confidence 6654432 22322222 345666666666666677899888876654444432 222 23568998887665443
Q ss_pred eEEEEeCCCC
Q 010794 359 TAKIWNMKQD 368 (501)
Q Consensus 359 ~i~iwd~~~~ 368 (501)
.|..-++...
T Consensus 208 ~I~~~~ldG~ 217 (302)
T 3s25_A 208 AIVHVNINNP 217 (302)
T ss_dssp EEEEECSSSC
T ss_pred EEEEEECCCC
Confidence 4544455443
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.27 E-value=1.5 Score=43.47 Aligned_cols=92 Identities=12% Similarity=0.141 Sum_probs=62.4
Q ss_pred CCCcEEEEEEeCCCeEEEEeCCCC------e-------EEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-
Q 010794 396 PNQQLILASASFDSTVKLWDVELG------K-------LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG- 461 (501)
Q Consensus 396 ~~~~~~l~sgs~dg~i~iwd~~~~------~-------~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~- 461 (501)
|++++++++|-.+.++.++|++.. + ...+.. -...-...+|.++|.-..|--.|..|.-|++...
T Consensus 332 PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~ 410 (638)
T 3sbq_A 332 SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAV 410 (638)
T ss_dssp TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHH
T ss_pred CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccHHH
Confidence 334578888889999999998731 1 122333 2234577899999955566668999999998653
Q ss_pred ---------eeEEEEecCCCEEEEEE------CCCCCEEEEE
Q 010794 462 ---------KIVKTYTGNGGIFEVCW------NKEGDKIAAC 488 (501)
Q Consensus 462 ---------~~~~~~~~~~~i~~~~w------s~~g~~la~~ 488 (501)
.++..+..+-.+-.+.- .|||++|++.
T Consensus 411 ~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 411 RAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp HHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred HHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 34555555444555543 7789999887
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.92 E-value=26 Score=37.67 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=33.3
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 467 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 467 (501)
.|.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5778888889999999999999999999999988775
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=68.83 E-value=1.1e+02 Score=31.52 Aligned_cols=225 Identities=14% Similarity=0.103 Sum_probs=113.1
Q ss_pred ecCCCCEEEEE-e---cC-CeEEEEeCCCcceeEe-eeeccCCe--------EEEecCCCceEEEec-----------CC
Q 010794 261 WNKKGDYLLTG-S---CD-KTAIVWDVKTEEWKQQ-FEFHSGPT--------LDVDWRNNVSFATSS-----------TD 315 (501)
Q Consensus 261 ~~~~~~~l~s~-s---~D-~~i~iwd~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~-----------~d 315 (501)
++|++++++.+ | +| ..++++|+.+++.+.. +. ..... ..+.|.+...+..+. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 78888876532 2 22 3689999999886642 22 11100 223565433333321 12
Q ss_pred CeEEEEEcCCCc--ceeeecCCCCce-eEEEEcCCCC-----EEEEEeCC---CeEEEEeCCC--CceeeecccCCCCEE
Q 010794 316 NMIYVCKIGENR--PIKTFAGHQGEV-NCVKWDPTGS-----LLASCSDD---VTAKIWNMKQ--DKYVHDLREHSKEIY 382 (501)
Q Consensus 316 ~~i~~~~~~~~~--~~~~~~~h~~~v-~~v~~~~~~~-----~l~s~s~D---g~i~iwd~~~--~~~~~~~~~~~~~v~ 382 (501)
..++.|.+++.. ....|.+....+ .++..+++++ .+++.+.+ ..+.+.+... +.. ..+......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~-- 292 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSDA-- 292 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTTC--
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCcc--
Confidence 468888888753 334455443332 3455566766 35554422 3345555442 221 122111111
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEE---------eCCCeEEEEeCCCCe-------EEEE-ee-CCCCCeEEEEECCCCCEE
Q 010794 383 TIRWSPTGSGTNNPNQQLILASA---------SFDSTVKLWDVELGK-------LLYS-LN-GHREPVYSLAFSPTGEYL 444 (501)
Q Consensus 383 ~i~~~p~g~~~~~~~~~~~l~sg---------s~dg~i~iwd~~~~~-------~~~~-~~-~h~~~v~~l~~spdg~~l 444 (501)
.+...+.+. +++.+. ...+.|...++.++. .... +. .....+..+.|..+ .++
T Consensus 293 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 293 TLQGSFKEY--------VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp EEEEEETTE--------EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred eEeeeECCE--------EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 112223321 233221 235677788776531 1122 22 22345778889876 566
Q ss_pred EEEeCCC--cEEEEeCCCCe-eEEE---EecCCCEEEEEECCCCCEEEEEEC----CCeEEEEE
Q 010794 445 ASGSLDK--SMHIWSLKEGK-IVKT---YTGNGGIFEVCWNKEGDKIAACFA----NHTVCVLD 498 (501)
Q Consensus 445 asgs~Dg--~i~iw~~~~~~-~~~~---~~~~~~i~~~~ws~~g~~la~~~~----d~~v~v~~ 498 (501)
++...++ .|.++++.+|+ .+.. ++..+.+..+.++++++.++.... -..+..+|
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d 427 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWV 427 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEe
Confidence 7777776 46777776665 2222 333455777778888865554322 23455554
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=68.33 E-value=20 Score=36.02 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=40.7
Q ss_pred eEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEE
Q 010794 432 VYSLAFSPTGEYLASGSLD------------KSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAAC 488 (501)
Q Consensus 432 v~~l~~spdg~~lasgs~D------------g~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~ 488 (501)
.-.|+|+|.|.+++.-..+ ..+.+.+..+|++.+.+.+. ..++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4669999999966653221 24667777788876666553 348999999999987665
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.00 E-value=30 Score=37.23 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=33.0
Q ss_pred CEEEEEecCCCCEEEEEecCCeEEEEeCCCcceeEeeee
Q 010794 255 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 293 (501)
Q Consensus 255 ~V~~l~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 293 (501)
.+.++...++..++++-+.|+++|+|++.++.++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 467777788888999999999999999999988776543
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.24 E-value=90 Score=29.14 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=25.4
Q ss_pred CEEEEEeCCCeEEEEECCC--ceeEee--cCCCCCEEEEEecC-CCCEEEEEecCC
Q 010794 225 TLLATGSYDGQARIWSTNG--DLKCTL--SKHKGPIFSLKWNK-KGDYLLTGSCDK 275 (501)
Q Consensus 225 ~~l~sg~~dg~i~iw~~~~--~~~~~~--~~h~~~V~~l~~~~-~~~~l~s~s~D~ 275 (501)
..|..|...| +.+++... ..-..+ ......|.+|++.| +...|+.+...+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 3566677766 44444321 211111 12235689999998 233455555454
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=64.52 E-value=29 Score=34.62 Aligned_cols=60 Identities=12% Similarity=0.187 Sum_probs=43.0
Q ss_pred CCeEEEEECCCCCEEE-EEeC-----------CCcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEEE
Q 010794 430 EPVYSLAFSPTGEYLA-SGSL-----------DKSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAACF 489 (501)
Q Consensus 430 ~~v~~l~~spdg~~la-sgs~-----------Dg~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~~ 489 (501)
.....|+|+++|.+.+ +=+. .+.|..++..+|++...+... ..++.++|+||++.|.++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3467899999998777 3211 126777788788876666542 3589999999999887653
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.90 E-value=17 Score=37.22 Aligned_cols=38 Identities=18% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec
Q 010794 430 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG 469 (501)
Q Consensus 430 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~ 469 (501)
..|.++.+ +..+|++-+.|.++|+|++.+++++.+..-
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666655 367999999999999999999998877643
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.21 E-value=8.6 Score=42.45 Aligned_cols=38 Identities=26% Similarity=0.308 Sum_probs=32.3
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe
Q 010794 431 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT 468 (501)
Q Consensus 431 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~ 468 (501)
.|.+++..++..+|++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556677888999999999999999999999887753
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=47.37 E-value=1.8e+02 Score=27.02 Aligned_cols=75 Identities=11% Similarity=0.092 Sum_probs=38.8
Q ss_pred CCeEEEEECC--CCCEEEEEeCCC----eEEEEECCCceeEeec------C--------CCCCEEEEEecCC--CCEEEE
Q 010794 213 KDVTTLDWNG--EGTLLATGSYDG----QARIWSTNGDLKCTLS------K--------HKGPIFSLKWNKK--GDYLLT 270 (501)
Q Consensus 213 ~~V~~~~~s~--~~~~l~sg~~dg----~i~iw~~~~~~~~~~~------~--------h~~~V~~l~~~~~--~~~l~s 270 (501)
..|.+|++.| .+.+.+. +..| .|...+-.+..-..+. . +...|.+|++.|. ...|+.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g-~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMA-ARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEE-EEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEE-ecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4689999998 5555544 4344 3433322222111111 1 1125788999873 456676
Q ss_pred EecCCeEEEEeCCCccee
Q 010794 271 GSCDKTAIVWDVKTEEWK 288 (501)
Q Consensus 271 ~s~D~~i~iwd~~~~~~~ 288 (501)
+...+.|...+-....+.
T Consensus 134 g~~~ggl~~S~DgG~tW~ 151 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWE 151 (394)
T ss_dssp EEETTEEEEESSTTSBCE
T ss_pred EecCCcEEEEcCCCCCeE
Confidence 666666666543333443
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.48 E-value=15 Score=40.61 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=31.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeec
Q 010794 338 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 374 (501)
Q Consensus 338 ~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 374 (501)
.+.+++..++..++++-+.|+++|||++.++.++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4556677788899999999999999999999887653
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.15 E-value=33 Score=35.26 Aligned_cols=35 Identities=17% Similarity=0.450 Sum_probs=28.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeec
Q 010794 338 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 374 (501)
Q Consensus 338 ~v~~v~~~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 374 (501)
.|.++.+ +..++++-+.|.++|+|++++++++.+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 4555554 4789999999999999999999877654
No 363
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=39.64 E-value=2.7e+02 Score=26.85 Aligned_cols=51 Identities=16% Similarity=0.287 Sum_probs=34.3
Q ss_pred CeEEEEECCCCC-EEEEEeCCCeEEEEECCCce----eEeec---------CCCCCEEEEEecCC
Q 010794 214 DVTTLDWNGEGT-LLATGSYDGQARIWSTNGDL----KCTLS---------KHKGPIFSLKWNKK 264 (501)
Q Consensus 214 ~V~~~~~s~~~~-~l~sg~~dg~i~iw~~~~~~----~~~~~---------~h~~~V~~l~~~~~ 264 (501)
.-+.|+|.|+|. .|+.+...|.|++++..+.. ...+. ........|+|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 357899999996 45556788999999765431 11111 11356789999996
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=34.69 E-value=2.9e+02 Score=25.81 Aligned_cols=162 Identities=9% Similarity=0.149 Sum_probs=86.1
Q ss_pred eEEEEeCCCc--ceeEeeeeccCC------eE--EEec-C------CCceEEEecCCCeEEEEEcCCCcceeeec-----
Q 010794 276 TAIVWDVKTE--EWKQQFEFHSGP------TL--DVDW-R------NNVSFATSSTDNMIYVCKIGENRPIKTFA----- 333 (501)
Q Consensus 276 ~i~iwd~~~~--~~~~~~~~~~~~------~~--~~~~-~------~~~~~~~~~~d~~i~~~~~~~~~~~~~~~----- 333 (501)
.|.+||+.+. +.++++.+.... .. .++. . ....+++-+....|.|+++.+++.-+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888888 777777654221 22 2331 1 22335566667889999988765443331
Q ss_pred ---------CC----CCceeEEEEcCC----CCEEEEEeCCCeEEEEeCCCC-----ce---eeecccC--CCCEEEEEE
Q 010794 334 ---------GH----QGEVNCVKWDPT----GSLLASCSDDVTAKIWNMKQD-----KY---VHDLREH--SKEIYTIRW 386 (501)
Q Consensus 334 ---------~h----~~~v~~v~~~~~----~~~l~s~s~Dg~i~iwd~~~~-----~~---~~~~~~~--~~~v~~i~~ 386 (501)
|. ...+..++++|+ ++.|.-+...+ -++|.+.+. .. +..+-.. .......+.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 11 135778888887 66666555443 234443221 11 1111000 112222333
Q ss_pred c-CCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-C------eEEEEeeCCCCCeEEEEECCCCCEEEEEe
Q 010794 387 S-PTGSGTNNPNQQLILASASFDSTVKLWDVEL-G------KLLYSLNGHREPVYSLAFSPTGEYLASGS 448 (501)
Q Consensus 387 ~-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~------~~~~~~~~h~~~v~~l~~spdg~~lasgs 448 (501)
. .+| .++++--..+.|..|+..+ . ..+.. ...-..+..+++.++|.+.+..+
T Consensus 283 D~~~G---------~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~-d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 283 DPKTK---------VIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT-SSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CTTTC---------EEEEEESSSSEEEEEETTSCSBCGGGEEEEEE-CTTCCSEEEEEECTTSCEEEEEC
T ss_pred eCCCC---------eEEEEeccCCeEEEEeCCCCccccCceEEEEE-CCCccccCeEEECCCCeEEEEEC
Confidence 2 233 3555666778899999875 1 12221 22334577888877776656554
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.19 E-value=2e+02 Score=28.85 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=26.3
Q ss_pred eEEEEeCCCCeEEEEeeCCC-CCeEEEEECCCCCEEEEE
Q 010794 410 TVKLWDVELGKLLYSLNGHR-EPVYSLAFSPTGEYLASG 447 (501)
Q Consensus 410 ~i~iwd~~~~~~~~~~~~h~-~~v~~l~~spdg~~lasg 447 (501)
.+.+.+..+++...-+.+.. ..++.++|+||++.|...
T Consensus 510 ~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35555666777655555543 568999999999877654
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.10 E-value=2e+02 Score=28.66 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=26.8
Q ss_pred eEEEEeCCCCeEEEEeeCC-CCCeEEEEECCCCCEEEEE
Q 010794 410 TVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLASG 447 (501)
Q Consensus 410 ~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~lasg 447 (501)
.|..++..+++....+.+. ...++.++||||++.|..+
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 5666777777765555433 3458999999999887654
No 367
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=27.22 E-value=3.5e+02 Score=24.46 Aligned_cols=144 Identities=8% Similarity=0.106 Sum_probs=0.0
Q ss_pred CCCCEEEEEeCCCeEEEEeCC----CCceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeC-----
Q 010794 346 PTGSLLASCSDDVTAKIWNMK----QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV----- 416 (501)
Q Consensus 346 ~~~~~l~s~s~Dg~i~iwd~~----~~~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~----- 416 (501)
|+...+++.+.+|.|+--.+. .+.....++....-+..+..+... .|+..+..|.+.-+..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d----------~ll~fT~~Gr~~~~~~~elp~ 72 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKD----------VLLLFTNKGNYLYCPVHELPD 72 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTS----------EEEEEETTSEEEEEEGGGSCB
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCC----------EEEEEECCCEEEEEEHHHCcC
Q ss_pred ----CCCe---EEEEeeCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeC--------CCCeeEEEEecCCCEEEEEEC
Q 010794 417 ----ELGK---LLYSLNGHREPVYSLAFSP--TGEYLASGSLDKSMHIWSL--------KEGKIVKTYTGNGGIFEVCWN 479 (501)
Q Consensus 417 ----~~~~---~~~~~~~h~~~v~~l~~sp--dg~~lasgs~Dg~i~iw~~--------~~~~~~~~~~~~~~i~~~~ws 479 (501)
..|. ....+..-...+..+...+ ++.+|+.++..|.++...+ ..|...-.+.....+..+...
T Consensus 73 ~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~ 152 (323)
T 1wp5_A 73 IRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLT 152 (323)
T ss_dssp CCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEE
T ss_pred CCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEe
Q ss_pred CCCCEEEEEECCCeEEEEEe
Q 010794 480 KEGDKIAACFANHTVCVLDF 499 (501)
Q Consensus 480 ~~g~~la~~~~d~~v~v~~~ 499 (501)
...+.|+..+.+|.+..+.+
T Consensus 153 ~~~~~i~l~T~~G~~irf~~ 172 (323)
T 1wp5_A 153 DGMNELFLVTHNGYALWFDE 172 (323)
T ss_dssp CSCSEEEEEETTSEEEEEEG
T ss_pred CCCCEEEEEeCCCcEEEEEH
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=26.34 E-value=3.7e+02 Score=24.39 Aligned_cols=141 Identities=15% Similarity=0.098 Sum_probs=78.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-------ceeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--
Q 010794 347 TGSLLASCSDDVTAKIWNMKQD-------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-- 417 (501)
Q Consensus 347 ~~~~l~s~s~Dg~i~iwd~~~~-------~~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-- 417 (501)
+..+++..+..|.++--.+..- .....++.. ..+..+....... .|+..+..|.+..+...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d---------~ill~T~~G~~~rf~~~~~ 177 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGD---------DLLLVSANGQSIRFSATDE 177 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTC---------EEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCC---------EEEEEECCCeEEEEECccc
Confidence 5789999999999998765431 112223332 3333333222211 34556678887777655
Q ss_pred C---------CeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCe-------eEEEE--ec-CCCEEEEEE
Q 010794 418 L---------GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK-------IVKTY--TG-NGGIFEVCW 478 (501)
Q Consensus 418 ~---------~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~-------~~~~~--~~-~~~i~~~~w 478 (501)
. |.....+. ....|.++..-+.+.+|+..+..|.++.-.+.... -+..+ .. .+.+..+..
T Consensus 178 eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~ 256 (327)
T 3uc1_A 178 ALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALI 256 (327)
T ss_dssp TSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEE
T ss_pred ccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEE
Confidence 2 12222222 23456666666667789999999999988764321 12222 12 334544444
Q ss_pred CCCCCEEEEEECCCeEEEEE
Q 010794 479 NKEGDKIAACFANHTVCVLD 498 (501)
Q Consensus 479 s~~g~~la~~~~d~~v~v~~ 498 (501)
..+...++..+.+|.+..+.
T Consensus 257 ~~~~~~i~l~T~~G~~ir~~ 276 (327)
T 3uc1_A 257 VDDDSELYAVTSGGGVIRTA 276 (327)
T ss_dssp ECTTCEEEEEEGGGCEEEEE
T ss_pred eCCCccEEEEcCCCeEEEEe
Confidence 34455677777777766554
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=25.87 E-value=3.4e+02 Score=23.84 Aligned_cols=139 Identities=15% Similarity=0.046 Sum_probs=76.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc------eeeecccCCCCEEEEEEcCCCCCCCCCCCcEEEEEEeCCCeEEEEeCC---
Q 010794 347 TGSLLASCSDDVTAKIWNMKQDK------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--- 417 (501)
Q Consensus 347 ~~~~l~s~s~Dg~i~iwd~~~~~------~~~~~~~~~~~v~~i~~~p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--- 417 (501)
+..+++..+.+|.++-..+..-. ....++. ...+..+...... + .++..+..|.+..+...
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~-------~--~ill~T~~G~~~r~~~~eip 148 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDE-------T--HILLFTKKGRVARFSVREVP 148 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSS-------C--EEEEEETTSEEEEEEGGGSC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCC-------C--EEEEEECCCEEEEEEhhhCC
Confidence 46788999999999988754321 1112222 2234333332211 1 35556778888777642
Q ss_pred ------CCeEEEEeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-------CeeEEEEecCCCEEEEEECCCCCE
Q 010794 418 ------LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE-------GKIVKTYTGNGGIFEVCWNKEGDK 484 (501)
Q Consensus 418 ------~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~-------~~~~~~~~~~~~i~~~~ws~~g~~ 484 (501)
.|.....+... ..|..+...+++.+|+..+..|.++...+.. ++-+..+...+.+..+..-.....
T Consensus 149 ~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~ 227 (276)
T 3no0_A 149 PSTPGARGVQGIKLEKN-DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVE 227 (276)
T ss_dssp BCCTTCCCEECCCCCTT-CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEE
T ss_pred CcCCCCCCEEEEccCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCE
Confidence 12232233322 4455555445567888999999999988643 222233333334444333233456
Q ss_pred EEEEECCCeEEE
Q 010794 485 IAACFANHTVCV 496 (501)
Q Consensus 485 la~~~~d~~v~v 496 (501)
++..+.+|.+..
T Consensus 228 i~~~t~~G~~ir 239 (276)
T 3no0_A 228 LLITTKNGKAFY 239 (276)
T ss_dssp EEEEETTSCEEE
T ss_pred EEEEcCCCeEEE
Confidence 667777777666
No 370
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=21.07 E-value=6.2e+02 Score=25.11 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=27.5
Q ss_pred eEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC
Q 010794 432 VYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN 470 (501)
Q Consensus 432 v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~ 470 (501)
|++|.+.+ ++.+|+|+-.- .|..-+. +|+++..+.++
T Consensus 357 iNsv~~d~~dd~~liSsR~~-~I~~Id~-tG~V~W~LGg~ 394 (571)
T 3elq_A 357 VNSIAYDAKDDSIILSSRHQ-GVVKIGR-DKQVKWILAPS 394 (571)
T ss_dssp EEEEEEETTTTEEEEEETTT-EEEEEET-TSCEEEEESCS
T ss_pred ecceeEcCCCCEEEEECCcc-EEEEEcC-CCcEEEEECCC
Confidence 89999988 45677777666 6666675 88888887554
Done!