BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010797
(501 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 281 bits (718), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 248/456 (54%), Gaps = 51/456 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + LG+G FG LC + TG++ A K ISKR++ K DK+ + RE+Q+++ L P
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 110
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK ++V E+ GGELFD II++ +SE AA I
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK ++A ++ DFGLS E K +D +G+AYY+APEVL Y +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 230
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILLSG PPF E I + +G FE W +S SAKDL+R+ML
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
Query: 293 TQDPKKRITSAQVLEHPWI----KEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIA 348
T P RI++ L+H WI KE +D+A+L+ ++QF+ KL + AL +
Sbjct: 291 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMG 349
Query: 349 ENLSTE-EIQGLKQMFTNIDTDNSGTITYEELKAGL-----------ARLGSKLTEAEVQ 396
L+++ E + L +F +D + G + EL G + L + E EV
Sbjct: 350 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 409
Query: 397 QLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMK 456
Q+++A D D NG I+Y EF+T M R L + L +AF+ FD DNSG I+ EL
Sbjct: 410 QVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-- 467
Query: 457 DYGMGDDD--TIKEIISEVDTDNDGRINYDEFCAMM 490
+G+ D D T K ++SEVD +NDG +++DEF M+
Sbjct: 468 -FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 281 bits (718), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 248/456 (54%), Gaps = 51/456 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + LG+G FG LC + TG++ A K ISKR++ K DK+ + RE+Q+++ L P
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 109
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK ++V E+ GGELFD II++ +SE AA I
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK ++A ++ DFGLS E K +D +G+AYY+APEVL Y +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 229
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILLSG PPF E I + +G FE W +S SAKDL+R+ML
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
Query: 293 TQDPKKRITSAQVLEHPWI----KEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIA 348
T P RI++ L+H WI KE +D+A+L+ ++QF+ KL + AL +
Sbjct: 290 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMG 348
Query: 349 ENLSTE-EIQGLKQMFTNIDTDNSGTITYEELKAGL-----------ARLGSKLTEAEVQ 396
L+++ E + L +F +D + G + EL G + L + E EV
Sbjct: 349 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 408
Query: 397 QLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMK 456
Q+++A D D NG I+Y EF+T M R L + L +AF+ FD DNSG I+ EL
Sbjct: 409 QVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-- 466
Query: 457 DYGMGDDD--TIKEIISEVDTDNDGRINYDEFCAMM 490
+G+ D D T K ++SEVD +NDG +++DEF M+
Sbjct: 467 -FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 281 bits (718), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 248/456 (54%), Gaps = 51/456 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + LG+G FG LC + TG++ A K ISKR++ K DK+ + RE+Q+++ L P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK ++V E+ GGELFD II++ +SE AA I
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK ++A ++ DFGLS E K +D +G+AYY+APEVL Y +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 206
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILLSG PPF E I + +G FE W +S SAKDL+R+ML
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
Query: 293 TQDPKKRITSAQVLEHPWI----KEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIA 348
T P RI++ L+H WI KE +D+A+L+ ++QF+ KL + AL +
Sbjct: 267 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMG 325
Query: 349 ENLSTE-EIQGLKQMFTNIDTDNSGTITYEELKAGL-----------ARLGSKLTEAEVQ 396
L+++ E + L +F +D + G + EL G + L + E EV
Sbjct: 326 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 385
Query: 397 QLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMK 456
Q+++A D D NG I+Y EF+T M R L + L +AF+ FD DNSG I+ EL
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-- 443
Query: 457 DYGMGDDD--TIKEIISEVDTDNDGRINYDEFCAMM 490
+G+ D D T K ++SEVD +NDG +++DEF M+
Sbjct: 444 -FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 281 bits (718), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 256/454 (56%), Gaps = 48/454 (10%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K+LG G +G LC + T + A K I K + T ++ + E+ +++ L P
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLD-HP 96
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK++ ++VME GGELFD II + ++E AA I
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK+++AL+K DFGLS E K ++ +G+AYY+APEVLR++Y +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDE 216
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVIL+ILL+G PPF +T++ I + +G F+S W +S AKDL+++ML
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML 276
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPID----SAVLSRMKQFRAMNKLKKLALKVIA 348
D ++RI++ Q LEHPWIKE + I+ + + M++F+ KL + AL +A
Sbjct: 277 QFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMA 336
Query: 349 ENL-STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSK--------LTEAEVQQLM 399
L S EE + L +F +ID + G + +EL G ++L + E+EV ++
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 400 EAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYG 459
AAD D NG IDY EF+T M R L D L AFQ FD+D +G I++DEL +G
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---FG 453
Query: 460 MG--DDDTIKEIISEVDTDNDGRINYDEFCAMMR 491
+ + T KE+IS +D++NDG ++++EFC M++
Sbjct: 454 LDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 249/459 (54%), Gaps = 54/459 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K+LG G +G LC + TG + A K I K + T ++ + E+ +++ L P
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK++ ++VME+ GGELFD II + +SE AA I
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK +AL+K DFGLS E G ++ +G+AYY+APEVLR++Y +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 184
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILL G PPF +T++ I + +G F+ W +S AK LV+ ML
Sbjct: 185 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 244
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPID------SAVLSRMKQFRAMNKLKKLALKV 346
T +P KRI++ + L HPWI + S K D + L MK+F++ KL + A+
Sbjct: 245 TYEPSKRISAEEALNHPWIVKF--CSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLF 302
Query: 347 IAENLST-EEIQGLKQMFTNIDTDNSGTITYEELKAG-----------LARLGSKLTEAE 394
+ L+T EE + L Q+F +D + G + +EL G ++ L S EAE
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 395 VQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIA 454
V ++++ D D NG I+Y EF+T M + L + L AFQ FD D SG IT +EL
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG-- 420
Query: 455 MKDYGMG--DDDTIKEIISEVDTDNDGRINYDEFCAMMR 491
+ +G+ DD+T +++ E D +NDG ++++EF MM+
Sbjct: 421 -RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 248/458 (54%), Gaps = 58/458 (12%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G FG C + T +++A K I+K K D I RE+++++ L PNI++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HPNIMKLF 87
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------------- 187
ED S ++V EL GGELFD II + +SE AA I
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 188 KDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWS 238
K EN LL K DFGLS ++ +D +G+AYY+APEVLR Y ++ D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
AGVILYILLSG PPF+ + E I + G F+ W TIS AKDL+R+MLT P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 299 RITSAQVLEHPWIK----EGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLST- 353
RIT+ Q LEHPWI+ E SD P + ++ ++QF+A KL + AL +A L+T
Sbjct: 268 RITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTL 327
Query: 354 EEIQGLKQMFTNIDTDNSGTITYEELKAG---LARL------------GSKLTEAEVQQL 398
+E + L ++F +DT+N G + +EL G RL GS + E ++ L
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI-EDQIDSL 386
Query: 399 MEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDY 458
M D+DG+G+I+Y EFI + + R L + + +AF+ FDKD SG I+ EL K +
Sbjct: 387 MPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL---FKLF 443
Query: 459 GMGDD----DTIKEIISEVDTDNDGRINYDEFCAMMRS 492
D + ++ II +VD + DG ++++EF M+++
Sbjct: 444 SQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 241/452 (53%), Gaps = 51/452 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + LG+G FG LC + TG++ A K ISKR++ K DK+ + RE+Q+++ L P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI + +EDK ++V E+ GGELFD II++ +SE AA I
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK ++A ++ DFGLS E K +D +G+AYY+APEVL Y +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE 206
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILLSG PPF E I + +G FE W +S SAKDL+R+ L
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXL 266
Query: 293 TQDPKKRITSAQVLEHPWI----KEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIA 348
T P RI++ L+H WI KE +D+A+L+ ++QF+ KL + AL
Sbjct: 267 TYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYXG 325
Query: 349 ENLSTE-EIQGLKQMFTNIDTDNSGTITYEELKAGL-----------ARLGSKLTEAEVQ 396
L+++ E + L +F D + G + EL G + L + E EV
Sbjct: 326 SKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVD 385
Query: 397 QLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMK 456
Q+++A D D NG I+Y EF+T R L + L +AF+ FD DNSG I+ EL
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI-- 443
Query: 457 DYGMGDDD--TIKEIISEVDTDNDGRINYDEF 486
+G+ D D T K ++SEVD +NDG +++DEF
Sbjct: 444 -FGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 230/458 (50%), Gaps = 56/458 (12%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD----------IKREIQIMQ 134
++LG G +G LC E + + A K I K + DD I EI +++
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------- 187
L PNI++ +EDK+ ++V E GGELF++II + + E AA+I
Sbjct: 102 SLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 188 ------------KDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL 226
K EN LL K DFGLS F + RD +G+AYY+APEVL
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 227 RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKD 286
+++Y ++ D+WS GVI+YILL G PPF + ++ I + +G F+ W IS AK+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 287 LVRRMLTQDPKKRITSAQVLEHPWIKEGG---EASDKPIDSAVLSRMKQFRAMNKLKKLA 343
L++ MLT D KR T+ + L WIK+ SD+ LS M++F KL + A
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAA 340
Query: 344 LKVIAENLST-EEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGS--------KLTEAE 394
+ I L+T EE + L +F +D + G + +EL G L + K E E
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 395 VQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIA 454
V +++ D D NG I+Y EFI+ M + L ++ L +AF FD D SG IT +EL
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANL 460
Query: 455 MKDYGMG--DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
+G+ + T +++ E D + D I++DEF +MM
Sbjct: 461 ---FGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 126/164 (76%), Gaps = 1/164 (0%)
Query: 331 KQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKL 390
KQF A NK KK AL+VIAE+LS EEI GLK+ F ID D SG IT+EELKAGL R+G+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 391 TEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDE 450
E+E+ L +AADVD +GTIDY EFI AT+H +K+ER+DHL+ AF +FDKD SG+IT DE
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 451 LEIAMKDYGMGDDDTIKEIISEVDTDNDGRINYDEFCAMMRSGT 494
L+ A +++G+ +D I+E+ +VD DNDGRI+Y+EF A + G+
Sbjct: 121 LQQACEEFGV-EDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 146/260 (56%), Gaps = 29/260 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + LG+G FG LC + TG++ A K ISKR++ K DK+ + RE+Q+++ L P
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK ++V E+ GGELFD II++ +SE AA I
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK ++A ++ DFGLS E K +D +G+AYY+APEVL Y +
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 212
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILLSG PPF E I + +G FE W +S SAKDL+R+ML
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
Query: 293 TQDPKKRITSAQVLEHPWIK 312
T P RI++ L+H WI+
Sbjct: 273 TYVPSMRISARDALDHEWIQ 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 169/306 (55%), Gaps = 33/306 (10%)
Query: 65 DTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
++++ K ED+K + F + LG G F L E +TG+ FA K I K+ L K +
Sbjct: 8 ESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKES 65
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS 184
I+ EI +++ + + NIV + YE +++VM+L +GGELFDRI+ KG Y+E+ A++
Sbjct: 66 SIENEIAVLRKIKHE-NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST 124
Query: 185 IC----------------------------SKDENALLKATDFGLSVFIEEGKVYRDIVG 216
+ S+DE + + +DFGLS +G V G
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Query: 217 SAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
+ YVAPEVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ + +F+S
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP 244
Query: 276 PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRA 335
W IS SAKD +R ++ +DP KR T Q HPWI G A +K I +V +++++ A
Sbjct: 245 YWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA-GDTALNKNIHESVSAQIRKNFA 303
Query: 336 MNKLKK 341
+K ++
Sbjct: 304 KSKWRQ 309
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 143/261 (54%), Gaps = 30/261 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y+ LG+G FG C + T +++A K I+K K D I RE+++++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
NI++ ED S ++V EL GGELFD II + +SE AA I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 188 ------KDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
K EN LL K DFGLS ++ +D +G+AYY+APEVLR Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WSAGVILYILLSG PPF+ + E I + G F+ W TIS AKDL+R+ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 293 TQDPKKRITSAQVLEHPWIKE 313
T P RIT+ Q LEHPWI++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 143/261 (54%), Gaps = 30/261 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y+ LG+G FG C + T +++A K I+K K D I RE+++++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
NI++ ED S ++V EL GGELFD II + +SE AA I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 188 ------KDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
K EN LL K DFGLS ++ +D +G+AYY+APEVLR Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WSAGVILYILLSG PPF+ + E I + G F+ W TIS AKDL+R+ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 293 TQDPKKRITSAQVLEHPWIKE 313
T P RIT+ Q LEHPWI++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 145/259 (55%), Gaps = 29/259 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K+LG G +G LC + TG + A K I K + T ++ + E+ +++ L P
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NI++ +EDK++ ++VME+ GGELFD II + +SE AA I
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 141
Query: 187 --------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK +AL+K DFGLS E G ++ +G+AYY+APEVLR++Y +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 201
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+ D+WS GVILYILL G PPF +T++ I + +G F+ W +S AK LV+ ML
Sbjct: 202 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 261
Query: 293 TQDPKKRITSAQVLEHPWI 311
T +P KRI++ + L HPWI
Sbjct: 262 TYEPSKRISAEEALNHPWI 280
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 161/299 (53%), Gaps = 33/299 (11%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQ 131
K ED++ Y F LG G F L + T + A K I+K+ L K + ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK--EGSMENEIA 68
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC----- 186
++ H PNIV YE ++++M+L +GGELFDRI+ KG Y+ER A+ +
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 187 -----------------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
S DE++ + +DFGLS + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 224 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS 282
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ + +F+S W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKK 341
SAKD +R ++ +DP+KR T Q L+HPWI G A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 160/299 (53%), Gaps = 33/299 (11%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQ 131
K ED++ Y F LG G F L + T + A K I+K L K + ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIA 68
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC----- 186
++ H PNIV YE ++++M+L +GGELFDRI+ KG Y+ER A+ +
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 187 -----------------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
S DE++ + +DFGLS + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 224 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS 282
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ + +F+S W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKK 341
SAKD +R ++ +DP+KR T Q L+HPWI G A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 160/299 (53%), Gaps = 33/299 (11%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQ 131
K ED++ Y F LG G F L + T + A K I+K L K + ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIA 68
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC----- 186
++ H PNIV YE ++++M+L +GGELFDRI+ KG Y+ER A+ +
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 187 -----------------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
S DE++ + +DFGLS + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 224 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS 282
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ + +F+S W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKK 341
SAKD +R ++ +DP+KR T Q L+HPWI G A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 160/295 (54%), Gaps = 38/295 (12%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELGRG + Y C + T + +A K + K DK ++ EI ++ LS PNI++
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVRTEIGVLLRLS-HPNIIKL 113
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------------ 187
K +E + +V+EL GGELFDRI+ KG+YSER AA
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 188 -KDENAL---------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR-RYGKEIDI 236
K EN L LK DFGLS +E + + + G+ Y APE+LR YG E+D+
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDM 233
Query: 237 WSAGVILYILLSGVPPFWAET-EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQD 295
WS G+I YILL G PF+ E ++ +F IL + F S W +S +AKDLVR+++ D
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 296 PKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAEN 350
PKKR+T+ Q L+HPW+ G A+ +D+A ++++F A KLK V+A +
Sbjct: 294 PKKRLTTFQALQHPWVT-GKAANFVHMDTA-QKKLQEFNARRKLKAAVKAVVASS 346
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 168/318 (52%), Gaps = 37/318 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +ELG+G F V C + TG+++A K I+ +KL + D ++RE +I + L P
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRLLK-HP 63
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NIV + ++ ++V +L GGELF+ I+A+ +YSE A AS C
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIQQILESVNHCHLN 122
Query: 187 ---------------SKDENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ ++ + + + G+ Y++PEVLR+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAE 349
+MLT +P KRIT+++ L+HPWI + + + +K+F A KLK L +
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM-- 300
Query: 350 NLSTEEIQGLKQMFTNID 367
L+T K + D
Sbjct: 301 -LATRNFSAAKSLLKKPD 317
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 158/291 (54%), Gaps = 34/291 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +ELG+G F V C + G+++A K I+ +KL + D ++RE +I + L P
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NIV + ++ +++ +L GGELF+ I+A+ +YSE A AS C
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHCIQQILEAVLHCHQM 140
Query: 187 ---------------SKDENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ +E E + + G+ Y++PEVLR+
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLK 340
+MLT +P KRIT+A+ L+HPWI + + +K+F A KLK
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 165/312 (52%), Gaps = 37/312 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +ELG+G F V C + G+++A I+ +KL + D ++RE +I + L P
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICR-LLKHP 70
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NIV + ++ +++ +L GGELF+ I+A+ +YSE A AS C
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHCIQQILEAVLHCHQM 129
Query: 187 ---------------SKDENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ +E E + + G+ Y++PEVLR+
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAE 349
+MLT +P KRIT+A+ L+HPWI + + +K+F A KLK L V+
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM-- 307
Query: 350 NLSTEEIQGLKQ 361
L+T KQ
Sbjct: 308 -LATRNFSVRKQ 318
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 145/273 (53%), Gaps = 32/273 (11%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D+ +Y+ +GRG +G + + T + A K I K + D D K+EI+IM+
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 79
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
L PNI+ +ED +++VMELC GGELF+R++ K + E AA I
Sbjct: 80 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 188 -----------KDENAL---------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR 227
K EN L LK DFGL+ + GK+ R VG+ YYV+P+VL
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG E D WSAGV++Y+LL G PPF A T+ + I +G F W +S A+ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDK 320
+RR+LT+ PK+RITS Q LEH W ++ +S +
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 145/273 (53%), Gaps = 32/273 (11%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D+ +Y+ +GRG +G + + T + A K I K + D D K+EI+IM+
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 62
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
L PNI+ +ED +++VMELC GGELF+R++ K + E AA I
Sbjct: 63 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 188 -----------KDENAL---------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR 227
K EN L LK DFGL+ + GK+ R VG+ YYV+P+VL
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG E D WSAGV++Y+LL G PPF A T+ + I +G F W +S A+ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDK 320
+RR+LT+ PK+RITS Q LEH W ++ +S +
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 274
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
AE LS EEI GLK++F IDTDNSGTIT++ELK GL R+GS+L E+E++ LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 408 GTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIK 467
GTIDY EFI AT+H +KLER+++L AF +FDKD SG+IT+DE++ A KD+G+ DD I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHID 119
Query: 468 EIISEVDTDNDGRINYDEFCAMMR 491
++I E+D DNDG+I+Y EF AMMR
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 34/291 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +ELG+G F V C + TG+++A K I+ +KL + D ++RE +I + L P
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 63
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NIV + ++ ++V +L GGELF+ I+A+ +YSE A AS C
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIQQILESVNHCHLN 122
Query: 187 ---------------SKDENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ ++ + + + G+ Y++PEVLR+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLK 340
+MLT +P KRIT+++ L+HPWI + + + +K+F A KLK
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 151/284 (53%), Gaps = 33/284 (11%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQ 131
K ED++ Y F LG G F L + T + A K I+K L K + ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIA 68
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC----- 186
++ H PNIV YE ++++M+L +GGELFDRI+ KG Y+ER A+ +
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 187 -----------------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
S DE++ + +DFGLS + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 224 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS 282
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ + +F+S W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAV 326
SAKD +R ++ +DP+KR T Q L+HPWI G A DK I +V
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSV 290
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 164/306 (53%), Gaps = 36/306 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +ELG+G F V C + + +++A K I+ +KL + D ++RE +I + L P
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 90
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NIV + ++ ++V +L GGELF+ I+A+ +YSE A AS C
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIHQILESVNHIHQH 149
Query: 187 ---------------SKDENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ ++ E + + G+ Y++PEVLR+
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGK +DIW+ GVILYILL G PPFW E + ++ I G DF S W T++ AK+L+
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKK--LALKVI 347
+MLT +P KRIT+ Q L+HPW+ + + + +++F A KLK L ++
Sbjct: 270 QMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLV 329
Query: 348 AENLST 353
+ N S
Sbjct: 330 SRNFSV 335
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 163/316 (51%), Gaps = 36/316 (11%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y +ELG+G F V C +TG +FA K I+ +KL + D ++RE +I + L
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ-H 87
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC------------- 186
PNIV + +++ ++V +L GGELF+ I+A+ YSE A AS C
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYCHS 146
Query: 187 ----------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ + + + + G+ Y++PEVL++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
Y K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAE 349
MLT +PKKRIT+ Q L+ PWI + + +K+F A KLK L +
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM-- 324
Query: 350 NLSTEEIQGLKQMFTN 365
++T + L + N
Sbjct: 325 -IATRNLSNLGRNLLN 339
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 157/305 (51%), Gaps = 43/305 (14%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDS-AVLSRMKQFRAMNKLK 340
+ AKD +RR+L +DPKKR+T L+HPWI KP D+ LSR M K K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSRKASAVNMEKFK 297
Query: 341 KLALK 345
K A +
Sbjct: 298 KFAAR 302
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 146/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
EDV+ HY G+ELG GQF + C + TG+++A K I KR+L + +++I+RE+
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PNI+ +E+K V +++EL +GGELFD + K +E A
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFG++ IE G +++I G+ +VA
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF ET++ I + DF+ + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 246
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
AKD +RR+L +DPK+R+ AQ LEH WIK
Sbjct: 247 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 34/269 (12%)
Query: 77 VKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQIM 133
V+ HY G+ELG GQF + C + TG+++A K I KR+L + +++I+RE+ I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 134 QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------ 187
+ + PNI+ +E+K V +++EL +GGELFD + K +E A
Sbjct: 63 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 188 -------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVAPE 224
K EN +L K DFG++ IE G +++I G+ +VAPE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 225 VLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSS 283
++ G E D+WS GVI YILLSG PF ET++ I + DF+ + S
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 284 AKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
AKD +RR+L +DPK+R+T AQ LEH WIK
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 144/269 (53%), Gaps = 34/269 (12%)
Query: 77 VKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQIM 133
V+ HY G+ELG GQF + C + TG+++A K I KR+L + +++I+RE+ I+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 134 QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------ 187
+ + PNI+ +E+K V +++EL +GGELFD + K +E A
Sbjct: 84 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 188 -------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVAPE 224
K EN +L K DFG++ IE G +++I G+ +VAPE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 225 VLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSS 283
++ G E D+WS GVI YILLSG PF ET++ I + DF+ + S
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 284 AKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
AKD +RR+L +DPK+R+ AQ LEH WIK
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 157/291 (53%), Gaps = 34/291 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +++G+G F V C + TG ++A K I+ +KL + D ++RE +I + L
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICRLLK-HS 63
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC-------------- 186
NIV + ++ ++V +L GGELF+ I+A+ +YSE A AS C
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIQQILEAVLHCHQM 122
Query: 187 ---------------SKDENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ ++ + + + G+ Y++PEVLR+
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGK +DIW+ GVILYILL G PPFW E + ++ I G DF S W T++ AK+L+
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLK 340
+MLT +P KRIT+ + L+HPW+ + + + +K+F A KLK
Sbjct: 243 QMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG G+F V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 144/262 (54%), Gaps = 33/262 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y +ELG+G F V C +TG +FA K I+ +KL + D ++RE +I + L
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 63
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC------------- 186
PNIV + +++ ++V +L GGELF+ I+A+ YSE A AS C
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYCHS 122
Query: 187 ----------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ + + + + G+ Y++PEVL++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
Y K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 242
Query: 290 RMLTQDPKKRITSAQVLEHPWI 311
MLT +PKKRIT+ Q L+ PWI
Sbjct: 243 SMLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 144/262 (54%), Gaps = 33/262 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y +ELG+G F V C +TG +FA K I+ +KL + D ++RE +I + L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 64
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC------------- 186
PNIV + +++ ++V +L GGELF+ I+A+ YSE A AS C
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYCHS 123
Query: 187 ----------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ + + + + G+ Y++PEVL++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
Y K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 290 RMLTQDPKKRITSAQVLEHPWI 311
MLT +PKKRIT+ Q L+ PWI
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 144/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG GQF V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V ++ EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 144/262 (54%), Gaps = 33/262 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y +ELG+G F V C +TG +FA K I+ +KL + D ++RE +I + L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 64
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC------------- 186
PNIV + +++ ++V +L GGELF+ I+A+ YSE A AS C
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYCHS 123
Query: 187 ----------------SKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR- 229
SK + A +K DFGL++ + + + + G+ Y++PEVL++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
Y K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 290 RMLTQDPKKRITSAQVLEHPWI 311
MLT +PKKRIT+ Q L+ PWI
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 144/271 (53%), Gaps = 34/271 (12%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDIKREIQ 131
E+V +Y G+ELG G F V C E STG Q+A K I KR+ + ++DI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---- 187
I++ + PN++ YE+K V +++EL AGGELFD + K +E A
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 188 ---------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVA 222
K EN +L K DFGL+ I+ G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 223 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
PE++ G E D+WS GVI YILLSG PF +T++ + + +FE + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+ AKD +RR+L +DPKKR+T L+HPWIK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 35/295 (11%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
+++ + F + LG G F +L + TG+ FA K I K + ++ EI +++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS---LENEIAVLKK 62
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------- 188
+ + NIV + YE ++VM+L +GGELFDRI+ +G Y+E+ A+ + +
Sbjct: 63 IKHE-NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 189 ---------------------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR 227
+EN+ + TDFGLS +E+ + G+ YVAPEVL
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLA 180
Query: 228 RR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKD 286
++ Y K +D WS GVI YILL G PPF+ ETE +F+ I +G +FES W IS SAKD
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 287 LVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKK 341
+ +L +DP +R T + L HPWI +G A + I +V ++++ A +K ++
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWI-DGNTALHRDIYPSVSLQIQKNFAKSKWRQ 294
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 157/313 (50%), Gaps = 41/313 (13%)
Query: 74 YEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN--DKDDIKREIQ 131
+EDV Y + +G+G F V C TG+QFA K + K + +D+KRE
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH----YSERAAAS--- 184
I H+ P+IVE Y +++V E G +L I+ + YSE A+
Sbjct: 79 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 185 -------------------------ICSKDENALLKATDFGLSVFI-EEGKVYRDIVGSA 218
+ SK+ +A +K DFG+++ + E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 219 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPW 277
+++APEV++R YGK +D+W GVIL+ILLSG PF+ E+ +F+ I++G W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 278 PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
IS SAKDLVRRML DP +RIT + L HPW+KE + K + ++++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 338 KLKKLALKVIAEN 350
KLK L ++ +
Sbjct: 317 KLKGAVLAAVSSH 329
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 156/313 (49%), Gaps = 41/313 (13%)
Query: 74 YEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN--DKDDIKREIQ 131
+EDV Y + +G+G F V C TG+QFA K + K + +D+KRE
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH----YSERAAAS--- 184
I H+ P+IVE Y +++V E G +L I+ + YSE A+
Sbjct: 79 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 185 -------------------------ICSKDENALLKATDFGLSVFI-EEGKVYRDIVGSA 218
+ SK+ +A +K FG+++ + E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 219 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPW 277
+++APEV++R YGK +D+W GVIL+ILLSG PF+ E+ +F+ I++G W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 278 PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
IS SAKDLVRRML DP +RIT + L HPW+KE + K + ++++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 338 KLKKLALKVIAEN 350
KLK L ++ +
Sbjct: 317 KLKGAVLAAVSSH 329
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 156/313 (49%), Gaps = 41/313 (13%)
Query: 74 YEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN--DKDDIKREIQ 131
+EDV Y + +G+G F V C TG+QFA K + K + +D+KRE
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 80
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH----YSERAAAS--- 184
I H+ P+IVE Y +++V E G +L I+ + YSE A+
Sbjct: 81 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 185 -------------------------ICSKDENALLKATDFGLSVFI-EEGKVYRDIVGSA 218
+ SK+ +A +K FG+++ + E G V VG+
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 219 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPW 277
+++APEV++R YGK +D+W GVIL+ILLSG PF+ E+ +F+ I++G W
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 258
Query: 278 PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
IS SAKDLVRRML DP +RIT + L HPW+KE + K + ++++F A
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 318
Query: 338 KLKKLALKVIAEN 350
KLK L ++ +
Sbjct: 319 KLKGAVLAAVSSH 331
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 34/264 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND---KDDIKREIQIMQHLS 137
Y G+ELG GQF + C E STG ++A K I KR+ +++I+RE+ I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 138 GQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS---------- 187
PNI+ YE++ V +++EL +GGELFD + K SE A S
Sbjct: 74 -HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 188 ---------KDENALL----------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR 228
K EN +L K DFGL+ IE+G +++I G+ +VAPE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 229 R-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
G E D+WS GVI YILLSG PF +T++ I DF+ + S AKD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDF 252
Query: 288 VRRMLTQDPKKRITSAQVLEHPWI 311
+R++L ++ +KR+T + L HPWI
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 163/321 (50%), Gaps = 53/321 (16%)
Query: 72 KPYEDVKLH--YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDI 126
+P++ K+ Y G+ELG GQF + C E STG ++A K I KR+ +++I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 127 KREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC 186
+RE+ I++ + N++ YE++ V +++EL +GGELFD + K SE A S
Sbjct: 63 EREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 187 S-------------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGS 217
K EN +L K DFGL+ IE+G +++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 218 AYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP 276
+VAPE++ G E D+WS GVI YILLSG PF +T++ I DF+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 277 WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDS--AVLSR----- 329
+ S AKD +R++L ++ +KR+T + L HPWI P+D+ A++ R
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDNQQAMVRRESVVN 293
Query: 330 MKQFRA--MNKLKKLALKVIA 348
++ FR + + KLA +++
Sbjct: 294 LENFRKQYVRRRSKLAFSIVS 314
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 163/321 (50%), Gaps = 53/321 (16%)
Query: 72 KPYEDVKLH--YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDI 126
+P++ K+ Y G+ELG GQF + C E STG ++A K I KR+ +++I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 127 KREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC 186
+RE+ I++ + N++ YE++ V +++EL +GGELFD + K SE A S
Sbjct: 63 EREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 187 S-------------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGS 217
K EN +L K DFGL+ IE+G +++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 218 AYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP 276
+VAPE++ G E D+WS GVI YILLSG PF +T++ I DF+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 277 WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDS--AVLSR----- 329
+ S AKD +R++L ++ +KR+T + L HPWI P+D+ A++ R
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDNQQAMVRRESVVN 293
Query: 330 MKQFRA--MNKLKKLALKVIA 348
++ FR + + KLA +++
Sbjct: 294 LENFRKQYVRRRSKLAFSIVS 314
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 143/275 (52%), Gaps = 36/275 (13%)
Query: 72 KPYEDVKLH--YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDI 126
+P++ K+ Y G+ELG GQF + C E STG ++A K I KR+ +++I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 127 KREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC 186
+RE+ I++ + N++ YE++ V +++EL +GGELFD + K SE A S
Sbjct: 63 EREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 187 S-------------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGS 217
K EN +L K DFGL+ IE+G +++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 218 AYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP 276
+VAPE++ G E D+WS GVI YILLSG PF +T++ I DF+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 277 WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S AKD +R++L ++ +KR+T + L HPWI
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 143/275 (52%), Gaps = 36/275 (13%)
Query: 72 KPYEDVKLH--YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDI 126
+P++ K+ Y G+ELG GQF + C E STG ++A K I KR+ +++I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 127 KREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC 186
+RE+ I++ + N++ YE++ V +++EL +GGELFD + K SE A S
Sbjct: 63 EREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 187 S-------------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGS 217
K EN +L K DFGL+ IE+G +++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 218 AYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP 276
+VAPE++ G E D+WS GVI YILLSG PF +T++ I DF+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 277 WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S AKD +R++L ++ +KR+T + L HPWI
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 143/275 (52%), Gaps = 36/275 (13%)
Query: 72 KPYEDVKLH--YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN---DKDDI 126
+P++ K+ Y G+ELG GQF + C E STG ++A K I KR+ +++I
Sbjct: 3 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 127 KREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASIC 186
+RE+ I++ + N++ YE++ V +++EL +GGELFD + K SE A S
Sbjct: 63 EREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 187 S-------------------KDENALL----------KATDFGLSVFIEEGKVYRDIVGS 217
K EN +L K DFGL+ IE+G +++I G+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 218 AYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP 276
+VAPE++ G E D+WS GVI YILLSG PF +T++ I DF+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 277 WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S AKD +R++L ++ +KR+T + L HPWI
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 37/263 (14%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACK--SISKRKLVTKN---DKDDIKREIQIMQHLSGQPN 141
+GRG V C +TG +FA K ++ +L + ++ +RE I++ ++G P+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------------- 188
I+ +YE + +V +L GELFD + K SE+ SI
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 189 ------------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR------- 229
D+N ++ +DFG S +E G+ R++ G+ Y+APE+L+
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YGKE+D+W+ GVIL+ LL+G PPFW + + I++G F S W SS+ KDL+
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS 341
Query: 290 RMLTQDPKKRITSAQVLEHPWIK 312
R+L DP+ R+T+ Q L+HP+ +
Sbjct: 342 RLLQVDPEARLTAEQALQHPFFE 364
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 38/265 (14%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSI------SKRKLVTKNDKDDIKREIQIMQHLSGQP 140
LGRG V C T +++A K I S + ++ +E+ I++ +SG P
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI--------CS----- 187
NI++ K YE +V +L GELFD + K SE+ I C+
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 188 ------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR------ 229
K EN LL K TDFG S ++ G+ R++ G+ Y+APE++
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 204
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G+ F S W S + KDLV
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 264
Query: 289 RRMLTQDPKKRITSAQVLEHPWIKE 313
R L P+KR T+ + L HP+ ++
Sbjct: 265 SRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 151/304 (49%), Gaps = 38/304 (12%)
Query: 58 KQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL 117
K+ VP+P G Y+ +Y +ELG G FGV + C E +TGR F K I+
Sbjct: 35 KKYVPQP-VEVKQGSVYD----YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP 89
Query: 118 VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG-- 175
+ DK +K EI IM L P ++ A+EDK + +++E +GGELFDRI A+
Sbjct: 90 L---DKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK 145
Query: 176 ------------------HYSERAAASICSKDENAL--------LKATDFGLSVFIEEGK 209
H E + + K EN + +K DFGL+ + +
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205
Query: 210 VYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 268
+ + +A + APE++ R G D+W+ GV+ Y+LLSG+ PF E + + +
Sbjct: 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC 265
Query: 269 DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLS 328
D +F+ + ++S AKD ++ +L ++P+KR+T LEHPW+K I S+ +
Sbjct: 266 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYN 325
Query: 329 RMKQ 332
+++Q
Sbjct: 326 KIRQ 329
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 38/265 (14%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSI------SKRKLVTKNDKDDIKREIQIMQHLSGQP 140
LGRG V C T +++A K I S + ++ +E+ I++ +SG P
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI--------CS----- 187
NI++ K YE +V +L GELFD + K SE+ I C+
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 188 ------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR------ 229
K EN LL K TDFG S ++ G+ R++ G+ Y+APE++
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 191
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G+ F S W S + KDLV
Sbjct: 192 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 251
Query: 289 RRMLTQDPKKRITSAQVLEHPWIKE 313
R L P+KR T+ + L HP+ ++
Sbjct: 252 SRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 38/265 (14%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSI------SKRKLVTKNDKDDIKREIQIMQHLSGQP 140
LGRG V C T +++A K I S + ++ +E+ I++ +SG P
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI--------CS----- 187
NI++ K YE +V +L GELFD + K SE+ I C+
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 188 ------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR------ 229
K EN LL K TDFG S ++ G+ R + G+ Y+APE++
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHP 204
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G+ F S W S + KDLV
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 264
Query: 289 RRMLTQDPKKRITSAQVLEHPWIKE 313
R L P+KR T+ + L HP+ ++
Sbjct: 265 SRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A K ISKRK + ++ +++ EI+I++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 72 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL- 226
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 227 ---RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A K ISKRK + ++ +++ EI+I++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 72 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL- 226
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 227 ---RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A K ISKRK + ++ +++ EI+I++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 71 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL- 226
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 227 ---RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 248
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A K ISKRK + ++ +++ EI+I++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 78 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL- 226
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 227 ---RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 255
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 256 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A K ISKRK + ++ +++ EI+I++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 72 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL- 226
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 227 ---RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 39/304 (12%)
Query: 58 KQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL 117
KQ P+P + ++ V HY +ELG G FGV + TE +TG FA K +
Sbjct: 35 KQYYPQP-----VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH- 88
Query: 118 VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI------ 171
++DK+ +++EIQ M L P +V A+ED + ++ E +GGELF+++
Sbjct: 89 --ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 145
Query: 172 ------------IAKG--HYSERAAASICSKDENAL--------LKATDFGLSVFIEEGK 209
+ KG H E + K EN + LK DFGL+ ++ +
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
Query: 210 VYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 268
+ G+A + APEV + G D+WS GV+ YILLSG+ PF E + +
Sbjct: 206 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 265
Query: 269 DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEG-GEASDKPIDSAVL 327
D + + + + IS KD +R++L DP R+T Q LEHPW+ G D I S+
Sbjct: 266 DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRY 325
Query: 328 SRMK 331
++++
Sbjct: 326 TKIR 329
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 39/304 (12%)
Query: 58 KQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL 117
KQ P+P + ++ V HY +ELG G FGV + TE +TG FA K +
Sbjct: 141 KQYYPQP-----VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH- 194
Query: 118 VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI------ 171
++DK+ +++EIQ M L P +V A+ED + ++ E +GGELF+++
Sbjct: 195 --ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 251
Query: 172 ------------IAKG--HYSERAAASICSKDENAL--------LKATDFGLSVFIEEGK 209
+ KG H E + K EN + LK DFGL+ ++ +
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 210 VYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 268
+ G+A + APEV + G D+WS GV+ YILLSG+ PF E + +
Sbjct: 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 371
Query: 269 DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEG-GEASDKPIDSAVL 327
D + + + + IS KD +R++L DP R+T Q LEHPW+ G D I S+
Sbjct: 372 DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRY 431
Query: 328 SRMK 331
++++
Sbjct: 432 TKIR 435
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A + ISKRK + ++ +++ EI+I++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 211 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR 227
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 328
Query: 228 RR----YGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 329 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 388
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 40/271 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-----DIKREIQIMQH 135
Y K LG G G L E T ++ A + ISKRK + ++ +++ EI+I++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
L+ P I++ K + D + ++V+EL GGELFD+++ E
Sbjct: 197 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 183 ---------------ASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL- 226
+ S++E+ L+K TDFG S + E + R + G+ Y+APEVL
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314
Query: 227 ---RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGDIDFESAPWPTISS 282
Y + +D WS GVIL+I LSG PPF T+ + D I G +F W +S
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
A DLV+++L DPK R T+ + L HPW+++
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 143/304 (47%), Gaps = 53/304 (17%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G F + C + + FA K ISKR + + ++EI ++ G PNIV+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVK 70
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ D+ +VMEL GGELF+RI K H+SE A+ I K
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 189 ------------DENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEI 234
++N +K DFG + + + + + +Y APE+L + Y +
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 235 DIWSAGVILYILLSGVPPFWAE-------TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
D+WS GVILY +LSG PF + + I I +GD FE W +S AKDL
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPI---------DSAVLSRMK-QFRAMN 337
++ +LT DP KR+ + + + W+++G + S P+ +AV + +K F A N
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFN 310
Query: 338 KLKK 341
K K+
Sbjct: 311 KYKR 314
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 128/265 (48%), Gaps = 41/265 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +++G G + V C +T +FA K I K K D EI+I+ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK-------SKRDPTEEIEILLRYGQHP 76
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
NI+ K Y+D + V+VV EL GGEL D+I+ + +SER A+++
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 188 ------KDENAL----------LKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
K N L ++ DFG + + E + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWA---ETEKGIFDAILQGDIDFESAPWPTISSSAKD 286
Y DIWS GV+LY +L+G PF +T + I I G W ++S +AKD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 287 LVRRMLTQDPKKRITSAQVLEHPWI 311
LV +ML DP +R+T+A VL HPWI
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 41/267 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + +G G + C +T ++A K I K K D EI+I+ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDPSEEIEILLRYGQHP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAA----------------- 183
NI+ K Y+D + V++V EL GGEL D+I+ + +SER A+
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 184 ---------SICSKDENA---LLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
+I DE+ L+ DFG + + E + +A +VAPEVL+R+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPFW---AETEKGIFDAILQGDIDFESAPWPTISSSAKD 286
Y + DIWS G++LY +L+G PF ++T + I I G W T+S +AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 287 LVRRMLTQDPKKRITSAQVLEHPWIKE 313
LV +ML DP +R+T+ QVL+HPW+ +
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 41/267 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y + +G G + C +T ++A K I K K D EI+I+ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDPSEEIEILLRYGQHP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAA----------------- 183
NI+ K Y+D + V++V EL GGEL D+I+ + +SER A+
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 184 ---------SICSKDENA---LLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
+I DE+ L+ DFG + + E + +A +VAPEVL+R+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPFW---AETEKGIFDAILQGDIDFESAPWPTISSSAKD 286
Y + DIWS G++LY +L+G PF ++T + I I G W T+S +AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 287 LVRRMLTQDPKKRITSAQVLEHPWIKE 313
LV +ML DP +R+T+ QVL+HPW+ +
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 141/266 (53%), Gaps = 36/266 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ F ++LG G FG +L E S+G + K+I+K + ++ + I+ EI++++ L P
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HP 80
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---AKGH-YSERAAASICSKDENAL--- 193
NI++ +ED ++++VME C GGEL +RI+ A+G SE A + + NAL
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 194 -------------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR 228
+K DFGL+ + + + G+A Y+APEV +R
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 229 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
+ DIWSAGV++Y LL+G PF + + + + ++ P ++ A DL+
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLL 259
Query: 289 RRMLTQDPKKRITSAQVLEHPWIKEG 314
++MLT+DP++R ++AQVL H W K+
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 126/265 (47%), Gaps = 41/265 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y +++G G + V C +T +FA K I K K D EI+I+ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK-------SKRDPTEEIEILLRYGQHP 76
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
NI+ K Y+D + V+VV EL GGEL D+I+ + +SER A+++
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 188 ------KDENAL----------LKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR- 229
K N L ++ DFG + + E + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWA---ETEKGIFDAILQGDIDFESAPWPTISSSAKD 286
Y DIWS GV+LY L+G PF +T + I I G W ++S +AKD
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 287 LVRRMLTQDPKKRITSAQVLEHPWI 311
LV + L DP +R+T+A VL HPWI
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 133/285 (46%), Gaps = 49/285 (17%)
Query: 81 YSFGKE-LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
Y K+ LG G G C TG++ A K + D ++E+ SG
Sbjct: 11 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGG 62
Query: 140 PNIVEFKGAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI-------- 185
P+IV YE+ K+ + ++ME GGELF RI +G ++ER AA I
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 186 --------------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV 225
SK+++A+LK TDFG + + + + + YYVAPEV
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEV 181
Query: 226 L-RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA----ILQGDIDFESAPWPTI 280
L +Y K D+WS GVI+YILL G PPF++ T + I I G F + W +
Sbjct: 182 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 241
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S AK L+R +L DP +R+T Q + HPWI + P+ +A
Sbjct: 242 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 133/285 (46%), Gaps = 49/285 (17%)
Query: 81 YSFGKE-LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
Y K+ LG G G C TG++ A K + D ++E+ SG
Sbjct: 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGG 81
Query: 140 PNIVEFKGAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI-------- 185
P+IV YE+ K+ + ++ME GGELF RI +G ++ER AA I
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 186 --------------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV 225
SK+++A+LK TDFG + + + + + YYVAPEV
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEV 200
Query: 226 L-RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA----ILQGDIDFESAPWPTI 280
L +Y K D+WS GVI+YILL G PPF++ T + I I G F + W +
Sbjct: 201 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 260
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S AK L+R +L DP +R+T Q + HPWI + P+ +A
Sbjct: 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)
Query: 60 AVPRPDTNTILGKPYEDVKLHYSFGKE--LGRGQFGVTYLCTENSTGRQFACKSISKRKL 117
A P P + I+ V Y+ K LG G+FG + C E +TG + A K I R +
Sbjct: 68 APPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM 127
Query: 118 VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG-- 175
DK+++K EI +M L N+++ A+E K + +VME GGELFDRII +
Sbjct: 128 ---KDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN 183
Query: 176 --------------------------HYSERAAASICSKDENALLKATDFGLSVFIEEGK 209
H + +C + +K DFGL+ + +
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 210 VYRDIVGSAYYVAPEVLRRRY-GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 268
+ G+ ++APEV+ + D+WS GVI Y+LLSG+ PF + + + IL
Sbjct: 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC 303
Query: 269 DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLS 328
D E + IS AK+ + ++L ++ RI++++ L+HPW+ SD + S + +
Sbjct: 304 RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL------SDHKLHSRLSA 357
Query: 329 RMKQFRA 335
+ K+ R
Sbjct: 358 QKKKNRG 364
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 140/317 (44%), Gaps = 40/317 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
HY G LG G FG + TG + A K ++++K+ + + I+REIQ ++ L
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRH 75
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI----------CS-- 187
P+I++ + +VME +GGELFD I G E+ + + C
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G+ R GS Y APEV+ R G
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+DIWS+GVILY LL G PF + +F I G P++ S L++ ML
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS----LLKHML 251
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLS 352
DP KR T + EH W K+ P D + S M + ALK + E
Sbjct: 252 QVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM--------IDDEALKEVCEKFE 303
Query: 353 TEEIQGLKQMFTNIDTD 369
E + L ++ D
Sbjct: 304 CSEEEVLSCLYNRNHQD 320
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 145/297 (48%), Gaps = 38/297 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y ++LGRG+FG+ + C E S+ + + K + V D+ +K+EI I+ +++
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISIL-NIARHR 61
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK-------------------------- 174
NI+ ++E + + ++ E +G ++F+RI
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 175 --GHYSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR-RYG 231
GH+ R I ++ +K +FG + ++ G +R + + Y APEV +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
D+WS G ++Y+LLSG+ PF AET + I + I+ + F+ + IS A D V R+
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRL 241
Query: 292 LTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIA 348
L ++ K R+T+++ L+HPW+K+ E + + V+ +K R + L K L ++
Sbjct: 242 LVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDLNMVV 294
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
HY G LG G FG + TG + A K ++++K+ + + IKREIQ ++ L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRH 70
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
P+I++ +VME +GGELFD I G E +A C
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G+ RD GS Y APEV+ R G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+DIWS GVILY LL G PF E +F I G ++ S L+ ML
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLMHML 246
Query: 293 TQDPKKRITSAQVLEHPWIKE 313
DP KR T + EH W K+
Sbjct: 247 QVDPLKRATIKDIREHEWFKQ 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E A K + K +L + + ++REI+I HL P
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 75
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
NI+ + D++ +++++E GEL+ + G + E+ +A+
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 188 ------KDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
K EN L LK DFG SV + R + G+ Y+ PE++ + + +++
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+W AGV+ Y L G+PPF + + I+ D+ F P +S +KDL+ ++L
Sbjct: 195 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRY 250
Query: 295 DPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSR 329
P +R+ V+EHPW+K P+ + S+
Sbjct: 251 HPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 285
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E A K + K +L + + ++REI+I HL P
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
NI+ + D++ +++++E GEL+ + G + E+ +A+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 188 ------KDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
K EN L LK DFG SV + R + G+ Y+ PE++ + + +++
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+W AGV+ Y L G+PPF + + I+ D+ F P +S +KDL+ ++L
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRY 249
Query: 295 DPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSR 329
P +R+ V+EHPW+K P+ + S+
Sbjct: 250 HPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 75
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 135
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + + YYVAPEVL +Y
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 82
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKG--HYSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 83 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 142
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 143 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 202
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 203 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 262
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 263 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 127
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 128 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 187
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 188 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 247
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 248 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 307
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 308 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 77
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 81
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKG--HYSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 82 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 141
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 142 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 201
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 261
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 262 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 37/268 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 194 ------------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLR-RRYGKE 233
LK DFG SV + RD + G+ Y+ PE++ R + ++
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D+WS GV+ Y L G+PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF----VTEGARDLISRLLK 246
Query: 294 QDPKKRITSAQVLEHPWIKEGGEASDKP 321
+ +R+T A+VLEHPWIK S KP
Sbjct: 247 HNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 83
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKG--HYSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 84 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 143
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 203
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 204 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 263
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 264 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 76
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKG--HYSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 77 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 136
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 137 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 196
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 197 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 256
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 257 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
HY G LG G FG + TG + A K ++++K+ + + IKREIQ ++ L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRH 70
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
P+I++ +VME +GGELFD I G E +A C
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G+ R GS Y APEV+ R G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+DIWS GVILY LL G PF E +F I G ++ S L+ ML
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLMHML 246
Query: 293 TQDPKKRITSAQVLEHPWIKE 313
DP KR T + EH W K+
Sbjct: 247 QVDPLKRATIKDIREHEWFKQ 267
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 121
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 181
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 242 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 301
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 302 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 77
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 75
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKG--HYSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 135
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 195
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 91
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKG--HYSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 92 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 151
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 211
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 271
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 272 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 145/313 (46%), Gaps = 67/313 (21%)
Query: 66 TNTILGKPYEDVKLHYSFGKEL-GRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
T+++ GK +ED+ Y EL G G + G+++A K I K+ + +
Sbjct: 3 TDSLPGK-FEDM---YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---AGHSRS 55
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS 184
+ RE++ + G NI+E +ED ++V E GG + I + H++ER A+
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR 115
Query: 185 ICS-------------------KDENAL---------LKATDFGLSVFIEEGKVYRDI-- 214
+ K EN L +K DF L ++ I
Sbjct: 116 VVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITT 175
Query: 215 ------VGSAYYVAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF--------- 253
GSA Y+APEV+ Y K D+WS GV+LYI+LSG PPF
Sbjct: 176 PELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCG 235
Query: 254 WAETE------KGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
W E +F++I +G +F W ISS AKDL+ ++L +D K+R+++AQVL+
Sbjct: 236 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 308 HPWIKEGGEASDK 320
HPW++ G+A +K
Sbjct: 296 HPWVQ--GQAPEK 306
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 35/267 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G+PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF----VTEGARDLISRLLKH 247
Query: 295 DPKKRITSAQVLEHPWIKEGGEASDKP 321
+ +R+T A+VLEHPWIK S KP
Sbjct: 248 NASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 53/341 (15%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TGR+ A K I K +L + RE++IM+ L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-H 70
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS--------------- 184
PNIV+ E +++++++ME +GGE+FD ++A G E+ A S
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 185 -ICSKD---ENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
I +D EN LL K DFG S G GS Y APE+ + ++Y G
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++R L
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKRFL 246
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASD-KPIDSAVLSRMKQFRAMNKLKKLALKVIAENL 351
+P KR T Q+++ WI G E + KP L Q K++ + ++
Sbjct: 247 VLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQ-------KRIDI-MVGMGY 298
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTE 392
S EEIQ ++ + Y+E+ A LG K +E
Sbjct: 299 SQEEIQ-----------ESLSKMKYDEITATYLLLGRKSSE 328
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 32/271 (11%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+ LG+G+FG YL E A K + K +L + + ++REI+I HL PNI+
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILR 78
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS----------------- 187
+ D++ +++++E GEL+ + G + E+ +A+
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 188 --KDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWS 238
K EN L LK DFG SV + R + G+ Y+ PE++ + + +++D+W
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
AGV+ Y L G+PPF + + I+ D+ F P +S +KDL+ ++L P +
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQ 253
Query: 299 RITSAQVLEHPWIKEGGEASDKPIDSAVLSR 329
R+ V+EHPW+K P+ + S+
Sbjct: 254 RLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 137/271 (50%), Gaps = 34/271 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TGR+ A K I K +L + RE++IM+ L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-H 73
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS--------------- 184
PNIV+ E +++++++ME +GGE+FD ++A G E+ A S
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 185 -ICSKD---ENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
I +D EN LL K DFG S G G+ Y APE+ + ++Y G
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++R L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKRFL 249
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASD-KPI 322
+P KR T Q+++ WI G E + KP
Sbjct: 250 VLNPIKRGTLEQIMKDRWINAGHEEDELKPF 280
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 32/261 (12%)
Query: 84 GKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIV 143
KELGRG+F V C STG+++A K + KR+ ++ + +I EI +++ P ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVI 92
Query: 144 EFKGAYEDKQSVHVVMELCAGGELFD-------------------RIIAKGHY--SERAA 182
YE+ + +++E AGGE+F + I +G Y +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 183 ASICSKDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR-YGK 232
+ K +N LL K DFG+S I R+I+G+ Y+APE+L
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITT 212
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
D+W+ G+I Y+LL+ PF E + + I Q ++D+ + ++S A D ++ +L
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 293 TQDPKKRITSAQVLEHPWIKE 313
++P+KR T+ L H W+++
Sbjct: 273 VKNPEKRPTAEICLSHSWLQQ 293
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + D+ G+ Y+ PE++ R + +++
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 269
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 270 NPSQRPMLREVLEHPWI 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E GE++ + + E+ A+ ++ NAL
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E GE++ + + E+ A+ ++ NAL
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + D+ G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A K I K +L + + RE++IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G GS Y APE+ + ++Y G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+++ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKFL 248
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+++ W+ G E
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + D+ G+ Y+ PE++ R + +++
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + D+ G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A K I K +L + + RE++IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G GS Y APE+ + ++Y G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+++ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKFL 248
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+++ W+ G E
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A + I K +L + + RE++IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G + GS Y APE+ + ++Y G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+++ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKFL 248
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+++ W+ G E
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + D+ G+ Y+ PE++ R + +++
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 244
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 245 NPSQRPMLREVLEHPWI 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + D+ G+ Y+ PE++ R + +++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDEKV 190
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 36/271 (13%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQ 131
K Y+++ +Y + +G G F L TG A K + K L +D IK EI+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIE 60
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------- 180
+++L Q +I + E + +V+E C GGELFD II++ SE
Sbjct: 61 ALKNLRHQ-HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 181 AAASICS--------KDENAL------LKATDFGLSVFIEEGKVY--RDIVGSAYYVAPE 224
A A + S K EN L LK DFGL + K Y + GS Y APE
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE 179
Query: 225 VLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS 282
+++ + G E D+WS G++LY+L+ G PF + ++ I++G D W +S
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSP 235
Query: 283 SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
S+ L+++ML DPKKRI+ +L HPWI +
Sbjct: 236 SSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A + I K +L + + RE++IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G GS Y APE+ + ++Y G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+++ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKFL 248
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+++ W+ G E
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A K I K +L + + RE++IM+ L+
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-H 65
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G GS Y APE+ + ++Y G
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 185
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+++ L
Sbjct: 186 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKFL 241
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+++ W+ G E
Sbjct: 242 ILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A K I K +L + + RE++IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G G+ Y APE+ + ++Y G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+++ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKFL 248
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+++ W+ G E
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + ++ G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 34/258 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 194 ------------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLR-RRYGKE 233
LK DFG SV + RD + G+ Y+ PE++ R + ++
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLK 243
Query: 294 QDPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 269
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 270 NPSQRPMLREVLEHPWI 286
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 32/258 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K ++ + + ++REI+I HL P
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HP 83
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENALLKA---- 196
NI+ + D++ +++++E GEL+ + + E+ A+I + +AL+
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 197 ---------------------TDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
DFG SV + + + G+ Y+ PE++ R + +++
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR-RKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+W GV+ Y LL G PPF + + + I++ D+ F + ++ + A+DL+ ++L
Sbjct: 203 DLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISKLLRH 258
Query: 295 DPKKRITSAQVLEHPWIK 312
+P +R+ AQV HPW++
Sbjct: 259 NPSERLPLAQVSAHPWVR 276
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E ++ A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 85
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 260
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 261 NPSQRPMLREVLEHPWI 277
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 67
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 242
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 243 NPSQRPMLREVLEHPWI 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 247
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 248 NPSQRPMLREVLEHPWI 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 245
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 246 NPSQRPMLREVLEHPWI 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 118/278 (42%), Gaps = 47/278 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXL--------QDCPKARREVELHWRASQCPHIVRIV 121
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +V E GGELF RI +G ++ER A+ I
Sbjct: 122 DVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN 181
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYG 231
SK NA+LK TDFG + + YYVAPEVL +Y
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 232 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
K D WS GVI YILL G PPF++ G I G +F + W +S K L
Sbjct: 242 KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXL 301
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+R +L +P +R T + HPWI + + P+ ++
Sbjct: 302 IRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE + R + +++
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 249 NPSQRPXLREVLEHPWI 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E A K + K +L + ++RE++I HL P
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG SV + + G+ Y+ PE++ R + +++
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 240
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 241 NPSQRPMLREVLEHPWI 257
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK DFG S + + G+ Y+ PE++ R + +++
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 244
Query: 295 DPKKRITSAQVLEHPWIKEGGEASDKPIDS 324
+P +R +VLEHPWI S KP +S
Sbjct: 245 NPSQRPMLREVLEHPWITAN---SSKPSNS 271
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 38/260 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+ LG G FG +L GR +A K + K+++V + + + + ++M + P I+
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMK-VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHY----SERAAASIC-------SKD---- 189
G ++D Q + ++M+ GGELF + + ++ AA +C SKD
Sbjct: 71 MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 190 ----ENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
EN LL K TDFG + ++ + V + G+ Y+APEV+ + Y K ID WS
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVSTKPYNKSIDWWS 188
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++Y +L+G PF+ ++ IL ++ F P + KDL+ R++T+D +
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQ 244
Query: 299 RITSAQ-----VLEHPWIKE 313
R+ + Q V HPW KE
Sbjct: 245 RLGNLQNGTEDVKNHPWFKE 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 33/260 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K LG G FG L +TG++ A K I+K+ L + + I+REI ++ L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 63
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
P+I++ + K + +V+E AG ELFD I+ + SE+ +A C
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G + GS Y APEV+ + G
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY++L PF E+ +F I G +S A L++RML
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 238
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+P RI+ ++++ W K
Sbjct: 239 IVNPLNRISIHEIMQDDWFK 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K LG G FG L +TG++ A K I+K+ L + + I+REI ++ L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 73
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
P+I++ + K + +V+E AG ELFD I+ + SE+ +A C
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G + GS Y APEV+ + G
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY++L PF E+ +F I G + P +S A L++RML
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG---VYTLP-KFLSPGAAGLIKRML 248
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+P RI+ ++++ W K
Sbjct: 249 IVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 33/260 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K LG G FG L +TG++ A K I+K+ L + + I+REI ++ L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
P+I++ + K + +V+E AG ELFD I+ + SE+ +A C
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G + GS Y APEV+ + G
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY++L PF E+ +F I G +S A L++RML
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 247
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+P RI+ ++++ W K
Sbjct: 248 IVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 33/260 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K LG G FG L +TG++ A K I+K+ L + + I+REI ++ L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 67
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
P+I++ + K + +V+E AG ELFD I+ + SE+ +A C
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G + GS Y APEV+ + G
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY++L PF E+ +F I G +S A L++RML
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRML 242
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+P RI+ ++++ W K
Sbjct: 243 IVNPLNRISIHEIMQDDWFK 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK +FG SV + + G+ Y+ PE++ R + +++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ G+ LG+G+FG YL E + A K + K +L + ++RE++I HL P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------- 193
NI+ G + D V++++E G ++ + + E+ A+ ++ NAL
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 194 ------------------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEI 234
LK +FG SV + + G+ Y+ PE++ R + +++
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D+WS GV+ Y L G PPF A T + + I + + F ++ A+DL+ R+L
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 245
Query: 295 DPKKRITSAQVLEHPWI 311
+P +R +VLEHPWI
Sbjct: 246 NPSQRPMLREVLEHPWI 262
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 121/262 (46%), Gaps = 38/262 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS-GQ 139
Y K++G G FGV L + + A K I + + + +N +KREI + H S
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN----VKREI--INHRSLRH 73
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----------------AA 183
PNIV FK + +VME +GGELF+RI G +SE A
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 184 SICSKD---ENAL--------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY- 230
+C +D EN L LK DFG S + VG+ Y+APEV L++ Y
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA--PWPTISSSAKDLV 288
GK D+WS GV LY++L G PF E F + ++ + A + IS + L+
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 253
Query: 289 RRMLTQDPKKRITSAQVLEHPW 310
R+ DP KRI+ ++ H W
Sbjct: 254 SRIFVADPAKRISIPEIRNHEW 275
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS-GQ 139
Y K++G G FGV L + + A K I + + + N +KREI + H S
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN----VKREI--INHRSLRH 74
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----------------AA 183
PNIV FK + +VME +GGELF+RI G +SE A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 184 SICSKD---ENAL--------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY- 230
+C +D EN L LK DFG S + VG+ Y+APEV L++ Y
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA--PWPTISSSAKDLV 288
GK D+WS GV LY++L G PF E F + ++ + A + IS + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 289 RRMLTQDPKKRITSAQVLEHPW 310
R+ DP KRI+ ++ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEW 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 121/262 (46%), Gaps = 38/262 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS-GQ 139
Y K++G G FGV L + + A K I + + + +N +KREI + H S
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN----VKREI--INHRSLRH 74
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----------------AA 183
PNIV FK + +VME +GGELF+RI G +SE A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 184 SICSKD---ENAL--------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY- 230
+C +D EN L LK FG S +D VG+ Y+APEV L++ Y
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA--PWPTISSSAKDLV 288
GK D+WS GV LY++L G PF E F + ++ + A + IS + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 289 RRMLTQDPKKRITSAQVLEHPW 310
R+ DP KRI+ ++ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEW 276
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 65/305 (21%)
Query: 66 TNTILGKPYEDVKLHYSFGKE-LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
T++ G+ +EDV Y ++ LG G C T +++A K I K+ + +
Sbjct: 3 TDSFSGR-FEDV---YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRS 55
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS 184
+ RE++++ G N++E +E++ ++V E GG + I + H++E A+
Sbjct: 56 RVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV 115
Query: 185 ICS-------------------KDENAL---------LKATDFGLSVFIEEGKVYRDI-- 214
+ K EN L +K DFGL I+ I
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 215 ------VGSAYYVAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF--------- 253
GSA Y+APEV+ Y K D+WS GVILYILLSG PPF
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 254 WAETEKG------IFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
W E +F++I +G +F W IS +AKDL+ ++L +D K+R+++AQVL+
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 308 HPWIK 312
HPW++
Sbjct: 296 HPWVQ 300
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS-GQ 139
Y K++G G FGV L + + A K I + + + +N +KREI + H S
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN----VKREI--INHRSLRH 74
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----------------AA 183
PNIV FK + +VME +GGELF+RI G +SE A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 184 SICSKD---ENAL--------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY- 230
+C +D EN L LK FG S + VG+ Y+APEV L++ Y
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA--PWPTISSSAKDLV 288
GK D+WS GV LY++L G PF E F + ++ + A + IS + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 289 RRMLTQDPKKRITSAQVLEHPW 310
R+ DP KRI+ ++ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEW 276
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 128/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFGL+ ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 120/249 (48%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 95
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +A +P A+DLV ++
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARDLVEKL 271
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 272 LVLDATKRL 280
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 34/260 (13%)
Query: 70 LGKPYEDVKLH-YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR 128
L KP V ++ + + K LG+G FG L E +TGR +A K + K +V K++
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 129 EIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----AS 184
E +++Q+ S P + K +++ + VME GGELF + + +SE A A
Sbjct: 198 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 185 ICS----------------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYV 221
I S K EN +L K TDFGL I++G + G+ Y+
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 222 APEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI 280
APEVL YG+ +D W GV++Y ++ G PF+ + + +F+ IL +I F T+
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TL 372
Query: 281 SSSAKDLVRRMLTQDPKKRI 300
AK L+ +L +DPK+R+
Sbjct: 373 GPEAKSLLSGLLKKDPKQRL 392
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 34/260 (13%)
Query: 70 LGKPYEDVKLH-YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR 128
L KP V ++ + + K LG+G FG L E +TGR +A K + K +V K++
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 129 EIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----AS 184
E +++Q+ S P + K +++ + VME GGELF + + +SE A A
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 185 ICS----------------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYV 221
I S K EN +L K TDFGL I++G + G+ Y+
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 222 APEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI 280
APEVL YG+ +D W GV++Y ++ G PF+ + + +F+ IL +I F T+
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TL 375
Query: 281 SSSAKDLVRRMLTQDPKKRI 300
AK L+ +L +DPK+R+
Sbjct: 376 GPEAKSLLSGLLKKDPKQRL 395
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 37/260 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 294 QDPKKRI-----TSAQVLEH 308
+DPK+R+ + +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 119/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F T L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 266
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 267 LVLDATKRL 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 37/260 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 294 QDPKKRI-----TSAQVLEH 308
+DPK+R+ + +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 37/263 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 188
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 189 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 244
Query: 294 QDPKKRI-----TSAQVLEHPWI 311
+DPK+R+ + +V+EH +
Sbjct: 245 KDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 41/261 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD-DIKREIQIMQHLSGQ 139
Y + LG G FG L T T ++ A K IS R+L+ K+D ++REI ++ L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLR-H 68
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS-----ICS------- 187
P+I++ + +V+E AGGELFD I+ K +E IC+
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY--GK 232
K EN LL K DFGLS + +G + GS Y APEV+ + G
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIF---DAILQGDIDFESAPWPTISSSAKDLVR 289
E+D+WS G++LY++L G PF E +F ++ + DF +S A+ L+R
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLIR 240
Query: 290 RMLTQDPKKRITSAQVLEHPW 310
RM+ DP +RIT ++ PW
Sbjct: 241 RMIVADPMQRITIQEIRRDPW 261
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 92
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
DE ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 153 DLKPENLLIDEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 210
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 211 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 266
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 267 RFGNLKNGVNDIKNHKWF 284
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 37/260 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 70
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 246
Query: 294 QDPKKRI-----TSAQVLEH 308
+DPK+R+ + +V+EH
Sbjct: 247 KDPKQRLGGGPSDAKEVMEH 266
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 128/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFGL+ ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 37/260 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 294 QDPKKRI-----TSAQVLEH 308
+DPK+R+ + +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 39/282 (13%)
Query: 68 TILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK 127
T +G+ ED K+ G LG+G F Y TG + A K I K+ + ++
Sbjct: 4 TCIGEKIEDFKV----GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ 59
Query: 128 REIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK--GHYSERAA--- 182
E++I L P+I+E +ED V++V+E+C GE+ +R + +SE A
Sbjct: 60 NEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHF 117
Query: 183 -------------ASICSKD---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAY 219
I +D N +K DFGL+ ++ + + + G+
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN 177
Query: 220 YVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
Y++PE+ R +G E D+WS G + Y LL G PPF +T K + ++ D + S
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF--- 234
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDK 320
+S AKDL+ ++L ++P R++ + VL+HP++ K
Sbjct: 235 -LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 37/260 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 294 QDPKKRI-----TSAQVLEH 308
+DPK+R+ + +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 37/260 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K ++ K++ E +++Q+ + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K A++ + VME GGELF + + ++E A A I S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN +L K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 294 QDPKKRI-----TSAQVLEH 308
+DPK+R+ + +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 119/262 (45%), Gaps = 38/262 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS-GQ 139
Y K++G G FGV L + A K I + + + +N +KREI + H S
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN----VKREI--INHRSLRH 74
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE----------------RAAA 183
PNIV FK + +VME +GGELF+RI G +SE A
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 184 SICSKD---ENAL--------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY- 230
+ +D EN L LK DFG S + VG+ Y+APEV L++ Y
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA--PWPTISSSAKDLV 288
GK D+WS GV LY++L G PF E F + ++ + A + IS + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 289 RRMLTQDPKKRITSAQVLEHPW 310
R+ DP KRI+ ++ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEW 276
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
GTID+ EF+T M R + ++ + +AF+ FDKD +GFI+ EL M + G D+ +
Sbjct: 61 GTIDFPEFLTM-MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM S
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG FA K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG FA K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKDGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKDGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG FA K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKDGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIXNHKWF 298
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 65/305 (21%)
Query: 66 TNTILGKPYEDVKLHYSFGKE-LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
T++ G+ +EDV Y ++ LG G C T +++A K I K+ + +
Sbjct: 3 TDSFSGR-FEDV---YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRS 55
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAAS 184
+ RE++++ G N++E +E++ ++V E GG + I + H++E A+
Sbjct: 56 RVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV 115
Query: 185 ICS-------------------KDENAL---------LKATDFGLSVFIEEGKVYRDI-- 214
+ K EN L +K DF L I+ I
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 215 ------VGSAYYVAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF--------- 253
GSA Y+APEV+ Y K D+WS GVILYILLSG PPF
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 254 WAETEKG------IFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
W E +F++I +G +F W IS +AKDL+ ++L +D K+R+++AQVL+
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 308 HPWIK 312
HPW++
Sbjct: 296 HPWVQ 300
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM S
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 269
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 270 LVLDATKRL 278
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 17/191 (8%)
Query: 321 PIDSAVLSRMKQFRAMNKLKKLALKVIAENL-STEEIQGLKQMFTNIDTDNSGTITYEEL 379
P + + M++F+ KL + AL +A L S EE + L +F +ID + G + +EL
Sbjct: 26 PSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL 85
Query: 380 KAGLARLGSK--------LTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHL 431
G ++L + E+EV ++ AAD D NG IDY EF+T M R L D L
Sbjct: 86 IDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKL 145
Query: 432 YKAFQHFDKDNSGFITIDELEIAMKDYGMG--DDDTIKEIISEVDTDNDGRINYDEFCAM 489
AFQ FD+D +G I++DEL +G+ + T KE+IS +D++NDG ++++EFC M
Sbjct: 146 ESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKM 202
Query: 490 MR---SGTQPQ 497
++ S +PQ
Sbjct: 203 IQKLCSNNEPQ 213
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 300
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 301 RFGNLKNGVNDIKNHKWF 318
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 34/270 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TGR+ A K I K +L + RE++IM+ L+
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKILN-H 73
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++VME +GGE+FD ++A G E+ +A C
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G GS Y APE+ + ++Y G
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++++L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKKLL 249
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASD-KP 321
+P KR + Q+++ W+ G E + KP
Sbjct: 250 VLNPIKRGSLEQIMKDRWMNVGHEEEELKP 279
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 33/242 (13%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RI 300
R
Sbjct: 280 RF 281
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 265
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 266 LVLDATKRL 274
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 123/248 (49%), Gaps = 33/248 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K +V K++ E +++Q+ S P
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 70
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K +++ + VME GGELF + + +SE A A I S
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 188 -------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGK 232
K EN +L K TDFGL I++G + G+ Y+APEVL YG+
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 190
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+ AK L+ +L
Sbjct: 191 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLL 246
Query: 293 TQDPKKRI 300
+DPK+R+
Sbjct: 247 KKDPKQRL 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 98
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 217 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 272
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 273 RFGNLKNGVNDIKNHKWF 290
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 266
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 267 LVLDATKRL 275
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 67
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 243
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 244 LVLDATKRL 252
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 70
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 246
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 247 LVLDATKRL 255
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 123/248 (49%), Gaps = 33/248 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K +V K++ E +++Q+ S P
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 69
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K +++ + VME GGELF + + +SE A A I S
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 188 -------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGK 232
K EN +L K TDFGL I++G + G+ Y+APEVL YG+
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+ AK L+ +L
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLL 245
Query: 293 TQDPKKRI 300
+DPK+R+
Sbjct: 246 KKDPKQRL 253
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 116/277 (41%), Gaps = 66/277 (23%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG G G T +FA K + D +RE+++ S P+IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 77
Query: 147 GAYED----KQSVHVVMELCAGGELFDRIIAKGH--YSERAAASI--------------- 185
YE+ ++ + +VME GGELF RI +G ++ER A+ I
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 186 -------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGK 232
SK NA+LK TDFG A E +Y K
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------AKETTGEKYDK 177
Query: 233 EIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L+
Sbjct: 178 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 237
Query: 289 RRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
R +L +P +R+T + + HPWI + + P+ ++
Sbjct: 238 RNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 268
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 269 LVLDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 269
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 270 LVLDATKRL 278
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 268
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 269 LVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 266
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 267 LVLDATKRL 275
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 244
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 245 LVLDATKRL 253
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 268
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 269 LVLDATKRL 277
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM S
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 265
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 266 LVLDATKRL 274
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 97
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 273
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 274 LVLDATKRL 282
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 123/248 (49%), Gaps = 33/248 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + K LG+G FG L E +TGR +A K + K +V K++ E +++Q+ S P
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 68
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA----ASICS--------- 187
+ K +++ + VME GGELF + + +SE A A I S
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 188 -------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGK 232
K EN +L K TDFGL I++G + G+ Y+APEVL YG+
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 188
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+D W GV++Y ++ G PF+ + + +F+ IL +I F T+ AK L+ +L
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLL 244
Query: 293 TQDPKKRI 300
+DPK+R+
Sbjct: 245 KKDPKQRL 252
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM S
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 266
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 267 LVLDATKRL 275
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 69
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 245
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 246 LVLDATKRL 254
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G + + G+ Y+APE+ L + Y K +D W+
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVK-GATW-TLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 300
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 301 RFGNLKNGVNDIKNHKWF 318
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 74
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 250
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 251 LVLDATKRL 259
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE++ + Y K +D W+
Sbjct: 166 DLKPENLIIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKL 268
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 269 LVLDATKRL 277
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKDGVNDIKNHKWF 297
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 134/296 (45%), Gaps = 43/296 (14%)
Query: 46 GPTPAAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGR 105
G P +AP+ + + P T Y G+ LG+G F Y T+ T
Sbjct: 4 GSDPKSAPLKEIPDVLVDPRTMK-----------RYMRGRFLGKGGFAKCYEITDMDTKE 52
Query: 106 QFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGG 165
FA K + K L+ + K+ + EI I + L P++V F G +ED V+VV+E+C
Sbjct: 53 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRR 111
Query: 166 ELFDRIIAKGHYSERAAASICSK-------------------------DENALLKATDFG 200
L + + +E A + +++ +K DFG
Sbjct: 112 SLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG 171
Query: 201 LSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETE 258
L+ IE +G+ +D+ G+ Y+APEVL ++ + E+DIWS G ILY LL G PPF
Sbjct: 172 LATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
Query: 259 KGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEG 314
K + I + + S P I+ A L+RRML DP R + A++L + G
Sbjct: 232 KETYIRIKKNEY---SVPR-HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G ++E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 91
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 152 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 210 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 265
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 266 RFGNLKDGVNDIKNHKWF 283
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G + E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 33/264 (12%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
+Y K +G+G F L TG++ A K I K +L + + RE++I + L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLN-H 72
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER----------AAASICS-- 187
PNIV+ E ++++++V E +GGE+FD ++A G E+ +A C
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 -------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRY-GK 232
K EN LL K DFG S G G+ Y APE+ + ++Y G
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
E+D+WS GVILY L+SG PF + K + + +L+G P+ S+ ++L+++ L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YXSTDCENLLKKFL 248
Query: 293 TQDPKKRITSAQVLEHPWIKEGGE 316
+P KR T Q+ + W G E
Sbjct: 249 ILNPSKRGTLEQIXKDRWXNVGHE 272
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + GEL I G + E A I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKL 268
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 269 LVLDATKRL 277
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y G+ LG+G F Y T+ T FA K + K L+ + K+ + EI I + L P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NP 102
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------------ 188
++V F G +ED V+VV+E+C L + + +E A +
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 189 -------------DENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
+++ +K DFGL+ IE +G+ +D+ G+ Y+APEVL ++ + E
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+DIWS G ILY LL G PPF K + I + + S P I+ A L+RRML
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY---SVPR-HINPVASALIRRMLH 278
Query: 294 QDPKKRITSAQVLEHPWIKEG 314
DP R + A++L + G
Sbjct: 279 ADPTLRPSVAELLTDEFFTSG 299
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G + E A ++
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 300
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 301 RFGNLKNGVNDIKNHKWF 318
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G + E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMM 490
+ E+I E D D DG++NY+EF MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G + E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 100
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G + E A ++
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 161 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 218
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 219 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 274
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 275 RFGNLKNGVNDIKNHKWF 292
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G + E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 64 PDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK 123
P T L P Y F K++G G FGV L + T A K I + + +N
Sbjct: 5 PVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN-- 62
Query: 124 DDIKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA 182
++REI + H S PNIV FK + ++ME +GGEL++RI G +SE A
Sbjct: 63 --VQREI--INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEA 118
Query: 183 ----------------ASICSKD---ENAL--------LKATDFGLSVFIEEGKVYRDIV 215
IC +D EN L LK DFG S + V
Sbjct: 119 RFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV 178
Query: 216 GSAYYVAPEV-LRRRY-GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFE 273
G+ Y+APEV LR+ Y GK D+WS GV LY++L G PF E + +Q + +
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238
Query: 274 -SAPWPT-ISSSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
S P IS L+ R+ DP RI+ ++ H W
Sbjct: 239 YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSW 277
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
AE L+ E+I K+ F D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
GTID+ EF++ M R E+D + L +AF+ FD+D +G I+ EL M + G DD
Sbjct: 61 GTIDFPEFLS-LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG INY+EF MM S
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 98
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G + E A ++
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 217 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 272
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 273 RFGNLKNGVNDIKNHKWF 290
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+AP + L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 409 TIDYIEFITATMHRHKL-ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMMTA 449
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 467 KEIISEVDTDNDGRINYDEFCAMM 490
E+I E D D DG++NY+EF MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G + E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G + E A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K +G G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K DFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G + E A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMMTA 411
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L TG +A K + K+K+V + E +I+Q ++ P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GGE+F + G + E A ++
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
+ + + H W
Sbjct: 280 AFGNLKNGVNDIKNHKWF 297
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 51/266 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM---QHLSGQPNI 142
++G G G+ L E +GRQ A K + RK + ++ + E+ IM QH N+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHF----NV 104
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL--------- 193
VE +Y + + V+ME GG L D I+++ +E A++C AL
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 194 ----------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEID 235
+K +DFG I + R +VG+ Y++APEV+ R Y E+D
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAK------DLVR 289
IWS G+++ ++ G PP+++ D+ +Q +P P + +S K D +
Sbjct: 224 IWSLGIMVIEMVDGEPPYFS-------DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGG 315
RML +DP++R T+ ++L+HP++ + G
Sbjct: 277 RMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 345 KVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADV 404
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D
Sbjct: 2 NAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 61
Query: 405 DGNGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-D 462
DGNGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G
Sbjct: 62 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 121
Query: 463 DDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
D+ + E+I E D D DG++NY+EF MM +
Sbjct: 122 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 34/249 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ FGK LG G F L E +T R++A K + KR ++ +N + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----AASICS--------- 187
V+ ++D + ++ + G L I G + E A I S
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 188 ------KDENALL------KATDFGLS-VFIEEGKVYR--DIVGSAYYVAPEVLRRRYG- 231
K EN LL + TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
K D+W+ G I+Y L++G+PPF A E IF I++ + DF +P A+DLV ++
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKL 268
Query: 292 LTQDPKKRI 300
L D KR+
Sbjct: 269 LVLDATKRL 277
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
GTID+ EF++ M R E+D + L +AF+ FD+D +G I+ EL M + G DD
Sbjct: 61 GTIDFPEFLS-LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG INY+EF MM S
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+ + L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 407 NGTIDYIEFITATMHRHKL-ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
+GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K LG G FG L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME AGGE+F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ ++ TDFG + ++ G+ + + G+ +APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+ + L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 407 NGTIDYIEFITATMHRHKL-ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
+GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 32/261 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y G+ LG+G F Y T+ T FA K + K L+ + K+ + EI I + L P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NP 102
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------------ 188
++V F G +ED V+VV+E+C L + + +E A +
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 189 -------------DENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
+++ +K DFGL+ IE +G+ + + G+ Y+APEVL ++ + E
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFE 222
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+DIWS G ILY LL G PPF K + I + + S P I+ A L+RRML
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY---SVPR-HINPVASALIRRMLH 278
Query: 294 QDPKKRITSAQVLEHPWIKEG 314
DP R + A++L + G
Sbjct: 279 ADPTLRPSVAELLTDEFFTSG 299
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K +G G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GG++F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K DFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 32/261 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y G+ LG+G F Y T+ T FA K + K L+ + K+ + EI I + L P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NP 102
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------------ 188
++V F G +ED V+VV+E+C L + + +E A +
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 189 -------------DENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
+++ +K DFGL+ IE +G+ + + G+ Y+APEVL ++ + E
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+DIWS G ILY LL G PPF K + I + + S P I+ A L+RRML
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY---SVPR-HINPVASALIRRMLH 278
Query: 294 QDPKKRITSAQVLEHPWIKEG 314
DP R + A++L + G
Sbjct: 279 ADPTLRPSVAELLTDEFFTSG 299
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K +G G FG L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++VME GG++F + G +SE A ++
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K DFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 38/258 (14%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+ LG G FG L TG +A K + K+K+V + E +I Q ++ P +V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF-PFLVK 106
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK---------------- 188
+ +++D ++++V+E GGE+F + G +SE A ++
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 189 ---------DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWS 238
D+ +K DFG + ++ G+ + + G+ Y+APE+ L + Y K +D W+
Sbjct: 167 DLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D K
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 299 RITSAQ-----VLEHPWI 311
R + + + H W
Sbjct: 281 RFGNLKNGVNDIKNHKWF 298
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 409 TIDYIEFITATMHRHKL-ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMRS 492
+ ++I E D D DG++NY+EF MM +
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 36/256 (14%)
Query: 80 HYSFGKELGRGQFGVTYLCTENS---TGRQFACKSISKRKLVTKNDKDDIKR-EIQIMQH 135
++ K LG G +G +L + S TG+ +A K + K +V K + R E Q+++H
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAA------------ 183
+ P +V A++ + +H++++ GGELF + + ++E
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 184 ----SICSKD---ENALLKA------TDFGLS--VFIEEGKVYRDIVGSAYYVAPEVLR- 227
I +D EN LL + TDFGLS +E + D G+ Y+AP+++R
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 228 --RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPT-ISSSA 284
+ K +D WS GV++Y LL+G PF + EK A + I P+P +S+ A
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKSEPPYPQEMSALA 293
Query: 285 KDLVRRMLTQDPKKRI 300
KDL++R+L +DPKKR+
Sbjct: 294 KDLIQRLLMKDPKKRL 309
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 101/175 (57%), Gaps = 9/175 (5%)
Query: 322 IDSAVLSRMKQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKA 381
+ S +L +K F+ N+LKK+AL +IA++L EI L+ +F +D DNSGT++ +E+
Sbjct: 22 LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 382 GLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKD 441
GL ++G + ++ Q++ D + +G I Y +F+ AT+ + + + F+ FD D
Sbjct: 82 GLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDID 141
Query: 442 NSGFITIDELEIAMKDYGMGD------DDTIKEIISEVDTDNDGRINYDEFCAMM 490
+G I+++EL+ + +G D D I ++ EVD + DG I++ EF MM
Sbjct: 142 GNGKISVEELK---RIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D D DG++NY+EF MM +
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+ + K + ++ L +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF +M +
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+ + K + ++ L +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMM 490
+ E+I E D D DG++NY+EF +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 344 LKVIAENL-STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAA 402
L ++A + T+ + LK+ F D D +G I+ EL+ + LG KLT+ EV +++ A
Sbjct: 69 LNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 403 DVDGNGTIDYIEFITATMHR 422
DVDG+G ++Y EF+ M +
Sbjct: 129 DVDGDGQVNYEEFVQVMMAK 148
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ ++I K+ F+ D D G IT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+ + K + ++ L +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMM 490
+ E+I E D D DG+INYDEF +M
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVM 146
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 344 LKVIAENL-STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAA 402
L ++A + T+ + LK+ F D D +G I+ EL+ + LG KLT+ EV +++ A
Sbjct: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 403 DVDGNGTIDYIEFITATMHR 422
DVDG+G I+Y EF+ M +
Sbjct: 130 DVDGDGQINYDEFVKVMMAK 149
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 411 DYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKE 468
D+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ + E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 469 IISEVDTDNDGRINYDEFCAMMRS 492
+I E D D DG++NY+EF MM +
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMTA 145
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E + D DG++NY+EF MM +
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMTA 147
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+ + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 467 KEIISEVDTDNDGRINYDEFCAMM 490
E+I E D D DG++NY+EF MM
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMM 437
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 411 DYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKE 468
D+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ + E
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 469 IISEVDTDNDGRINYDEFCAMMRS 492
+I E D D DG++NY+EF MM +
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMTA 144
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 411 DYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKE 468
D+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ + E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 469 IISEVDTDNDGRINYDEFCAMM 490
+I E D D DG++NY+EF MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I E D D DG++NY+EF MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 64/77 (83%)
Query: 345 KVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADV 404
K +AE LS EEI GLK++F IDTDNSGTIT++ELK GL R+GS+L E+E++ LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 405 DGNGTIDYIEFITATMH 421
D +GTIDY EFI AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 431 LYKAFQHFDKDNSGFITIDELEIAMKDYG---MGDDDTIKEIISEVDTDNDGRINYDEFC 487
L + F+ D DNSG IT DEL+ +K G M + IK+++ D D G I+Y EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELM--ESEIKDLMDAADIDKSGTIDYGEFI 82
Query: 488 A 488
A
Sbjct: 83 A 83
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ +
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 467 KEIISEVDTDNDGRINYDEFCAMM 490
E+I E D D DG++NY+EF MM
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMM 144
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 43/263 (16%)
Query: 87 LGRGQFGVTYLC---TENSTGRQFACKSISKRKLVTKNDKD--DIKREIQIMQHLSGQPN 141
LG+G +G + T +TG+ FA K + K+ ++ +N KD K E I++ + P
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEEVK-HPF 82
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IAKGHYSERAA 182
IV+ A++ +++++E +GGELF ++ +A GH ++
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 183 ASICSKDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 234
K EN +L K TDFGL I +G V G+ Y+APE+L R + + +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAV 202
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
D WS G ++Y +L+G PPF E K D IL+ ++ P ++ A+DL++++L +
Sbjct: 203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKR 258
Query: 295 DPKKRIT-----SAQVLEHPWIK 312
+ R+ + +V HP+ +
Sbjct: 259 NAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 411 DYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKE 468
D+ EF+ + K + ++ L +AF+ FDKD +GFI+ EL M + G D+ + E
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 469 IISEVDTDNDGRINYDEFCAMMRS 492
+I E D D DG++NY+EF +M +
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMMA 144
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 43/269 (15%)
Query: 81 YSFGKELGRGQFGVTYLC---TENSTGRQFACKSISKRKLVTKNDKD--DIKREIQIMQH 135
+ + LG+G +G + T +TG+ FA K + K+ ++ +N KD K E I++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IAKGH 176
+ P IV+ A++ +++++E +GGELF ++ +A GH
Sbjct: 78 VK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 177 YSERAAASICSKDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR 229
++ K EN +L K TDFGL I +G V G+ Y+APE+L R
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
+ + +D WS G ++Y +L+G PPF E K D IL+ ++ P ++ A+DL+
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLL 252
Query: 289 RRMLTQDPKKRIT-----SAQVLEHPWIK 312
+++L ++ R+ + +V HP+ +
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 2/143 (1%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 412 YIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEI 469
+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ + E+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 470 ISEVDTDNDGRINYDEFCAMMRS 492
I E D D DG++NY+EF MM +
Sbjct: 123 IREADIDGDGQVNYEEFVQMMTA 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+A+ L+ ++I K+ F+ D D G IT +EL + LG TEAE+Q ++ D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 NGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
NGTID+ EF+ + K + ++ L +AF+ FDKD +GFI+ EL M + G D+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMM 490
+ E+I E D D DG+INY+EF +M
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVM 146
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 344 LKVIAENL-STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAA 402
L ++A + T+ + LK+ F D D +G I+ EL+ + LG KLT+ EV +++ A
Sbjct: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 403 DVDGNGTIDYIEFITATMHR 422
DVDG+G I+Y EF+ M +
Sbjct: 130 DVDGDGQINYEEFVKVMMAK 149
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 2/143 (1%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 412 YIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEI 469
+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL M + G D+ + E+
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 470 ISEVDTDNDGRINYDEFCAMMRS 492
I E D D DG++NY+EF MM +
Sbjct: 121 IREADIDGDGQVNYEEFVQMMTA 143
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 412 YIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEII 470
+ EF+T + K + + +AF+ FDKD +G+I+ EL M + G D+ + E+I
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 471 SEVDTDNDGRINYDEFCAMMRS 492
E + D DG++NY+EF MM +
Sbjct: 121 REANIDGDGQVNYEEFVQMMTA 142
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%)
Query: 344 LKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAAD 403
L ++A + + + +++ F D D +G I+ EL+ + LG KLT+ EV +++ A+
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 404 VDGNGTIDYIEFI 416
+DG+G ++Y EF+
Sbjct: 125 IDGDGQVNYEEFV 137
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + T S+G+ A K + RK + ++ + E+ IM+ + N+VE
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHE-NVVEM 136
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APE++ R YG E+DIWS
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++ ++ G PP++ E I + ++ +S S K + R+L +DP +
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 314
Query: 299 RITSAQVLEHPWI-KEGGEASDKPI 322
R T+A++L+HP++ K G AS P+
Sbjct: 315 RATAAELLKHPFLAKAGPPASIVPL 339
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + T S+G+ A K + RK + ++ + E+ IM+ + N+VE
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHE-NVVEM 91
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APE++ R YG E+DIWS
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++ ++ G PP++ E I + ++ +S S K + R+L +DP +
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 269
Query: 299 RITSAQVLEHPWI-KEGGEASDKPI 322
R T+A++L+HP++ K G AS P+
Sbjct: 270 RATAAELLKHPFLAKAGPPASIVPL 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + T S+G+ A K + RK + ++ + E+ IM+ + N+VE
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHE-NVVEM 93
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APE++ R YG E+DIWS
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 212
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++ ++ G PP++ E I + ++ +S S K + R+L +DP +
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 271
Query: 299 RITSAQVLEHPWI-KEGGEASDKPI 322
R T+A++L+HP++ K G AS P+
Sbjct: 272 RATAAELLKHPFLAKAGPPASIVPL 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + T S+G+ A K + RK + ++ + E+ IM+ + N+VE
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHE-NVVEM 82
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APE++ R YG E+DIWS
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++ ++ G PP++ E I + ++ +S S K + R+L +DP +
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 260
Query: 299 RITSAQVLEHPWI-KEGGEASDKPI 322
R T+A++L+HP++ K G AS P+
Sbjct: 261 RATAAELLKHPFLAKAGPPASIVPL 285
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 39/276 (14%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + T S+G+ A K + RK + ++ + E+ IM+ + N+VE
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHE-NVVEM 213
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRR-RYGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APE++ R YG E+DIWS
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++ ++ G PP++ E I + ++ +S S K + R+L +DP +
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 391
Query: 299 RITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFR 334
R T+A++L+HP++ + G ++++ M+Q R
Sbjct: 392 RATAAELLKHPFLAKAGPP------ASIVPLMRQNR 421
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 47/280 (16%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + TE TG+Q A K + RK + ++ + E+ IM+ N+V+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYH-HDNVVDM 107
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APEV+ R YG E+DIWS
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 239 AGVILYILLSGVPPFWAE----TEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
G+++ ++ G PP++ E + I D++ D +SS + + ML +
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHK-----VSSVLRGFLDLMLVR 281
Query: 295 DPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFR 334
+P +R T+ ++L HP++K G S ++ M+Q+R
Sbjct: 282 EPSQRATAQELLGHPFLKLAGPP------SCIVPLMRQYR 315
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
++G G G+ + T S+G+ A K + RK + ++ + E+ IM+ + N+VE
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHE-NVVEM 86
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENAL------------ 193
+Y + VVME GG L D I+ +E A++C AL
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 194 -------------LKATDFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWS 238
+K +DFG + +E + +VG+ Y++APE++ R YG E+DIWS
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G+++ ++ G PP++ E I + ++ +S S K + R+L +DP +
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 264
Query: 299 RITSAQVLEHPWI-KEGGEASDKPI 322
R T+A++L+HP++ K G AS P+
Sbjct: 265 RATAAELLKHPFLAKAGPPASIVPL 289
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 17/182 (9%)
Query: 324 SAVLSRMKQFRAMNKLKKLALKVIAENLST-EEIQGLKQMFTNIDTDNSGTITYEELKAG 382
+ L MK+F++ KL + A+ + L+T EE + L Q+F +D + G + +EL G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 383 -----------LARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHL 431
++ L S EAEV ++++ D D NG I+Y EF+T M + L + L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 432 YKAFQHFDKDNSGFITIDELEIAMKDYGMG--DDDTIKEIISEVDTDNDGRINYDEFCAM 489
AFQ FD D SG IT +EL + +G+ DD+T +++ E D +NDG ++++EF M
Sbjct: 126 LAAFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 490 MR 491
M+
Sbjct: 183 MQ 184
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Query: 326 VLSRMKQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLAR 385
VL K + + K +KLA+ +IA+ + +++ LK F +D D G IT E+LK GL +
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 386 LGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGF 445
G KL L++ D DG+G IDY EFI A + R +L + +Y AF+ FD DN G
Sbjct: 81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDGE 138
Query: 446 ITIDELEIAMK------DYGMGDDDTIKEIISEVDTDNDGRINYDEFCAMMR 491
IT EL + + D + +K +I +VD +NDG+I++ EF MM+
Sbjct: 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 431 LYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDNDGRINYDEFCAMM 490
L F D+D G+IT ++L+ ++ G+ ++ ++D+D G+I+Y EF A
Sbjct: 54 LKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAA 113
Query: 491 RSGTQPQAKL 500
Q KL
Sbjct: 114 LDRKQLSKKL 123
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 35/265 (13%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D K Y+ +++G+G G Y + +TG++ A I + L + K+ I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE 73
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
+ PNIV + +Y + VVME AGG L D ++ + E A++C
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 188 -----------KDENALL------KATDFGLSVFIEEGKVYR-DIVGSAYYVAPEVLRRR 229
K +N LL K TDFG I + R ++VG+ Y++APEV+ R+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG ++DIWS G++ ++ G PP+ E + ++ G + ++ +S+ +D
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDF 249
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIK 312
+ R L D +KR ++ ++L+H ++K
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 37/267 (13%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
++ F + LG+G FG L TG +A K + K ++ +D + E +I+
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGEL---------FDRIIAKGHYSERAAASICSKD- 189
P + + ++ + VME GG+L FD A+ + +E +A + D
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 190 ---------ENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGK 232
+N LL K DFG+ I G G+ Y+APE+L+ YG
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 233 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRML 292
+D W+ GV+LY +L G PF AE E +F+AIL ++ + + W + A +++ +
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGILKSFM 259
Query: 293 TQDPKKRITSAQ------VLEHPWIKE 313
T++P R+ S +L HP+ KE
Sbjct: 260 TKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
Query: 322 IDSAVLSRMKQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKA 381
ID VL K + M + +KLA+ +IA+ + ++Q LK F ++D + G IT +L+
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 382 GLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKD 441
GL R G L L++ D DG+G IDY EF+ A + R +L + +Y AF+ FD D
Sbjct: 80 GLERSGLMLP-PNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVD 137
Query: 442 NSGFITIDEL-EIAMKDYGMG-----DDDTIKEIISEVDTDNDGRINYDEFCAMMR 491
N G IT EL + G D + +K++I EVD + DG+I++ EF MM+
Sbjct: 138 NDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 431 LYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDNDGRINYDEFCAMM 490
L AF H D++ G IT +L ++ G+ ++ ++D+D G I+Y EF A
Sbjct: 57 LKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQIDSDGSGNIDYTEFLAAA 116
Query: 491 RSGTQPQAKL 500
Q KL
Sbjct: 117 IDRRQLSKKL 126
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 35/265 (13%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D K Y+ +++G+G G Y + +TG++ A I + L + K+ I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE 73
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
+ PNIV + +Y + VVME AGG L D ++ + E A++C
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 188 -----------KDENALL------KATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR 229
K +N LL K TDFG I + R +VG+ Y++APEV+ R+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG ++DIWS G++ ++ G PP+ E + ++ G + ++ +S+ +D
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDF 249
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIK 312
+ R L D +KR ++ ++L+H ++K
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 35/265 (13%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D K Y+ +++G+G G Y + +TG++ A I + L + K+ I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE 73
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
+ PNIV + +Y + VVME AGG L D ++ + E A++C
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 188 -----------KDENALL------KATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR 229
K +N LL K TDFG I + R +VG+ Y++APEV+ R+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG ++DIWS G++ ++ G PP+ E + ++ G + ++ +S+ +D
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDF 249
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIK 312
+ R L D +KR ++ ++L+H ++K
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 34/256 (13%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G FG L GRQ+ K I+ ++ +K ++++ +RE+ ++ ++ PNIV+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK-HPNIVQ 87
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRI---------------------IAKGHYSERAAA 183
++ ++E+ S+++VM+ C GG+LF RI +A H +R
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147
Query: 184 SICSKDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLRRR-YGKEID 235
K +N L + DFG++ V ++ R +G+ YY++PE+ + Y + D
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSD 207
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQD 295
IW+ G +LY L + F A + K + I+ G S + S + LV ++ ++
Sbjct: 208 IWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRSLVSQLFKRN 264
Query: 296 PKKRITSAQVLEHPWI 311
P+ R + +LE +I
Sbjct: 265 PRDRPSVNSILEKGFI 280
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 31/247 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ F K +G+G FG L + +A K + K+ ++ K ++ I E ++ P
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-RA---AASICS--------- 187
+V +++ ++ V++ GGELF + + + E RA AA I S
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 188 ------KDENALLKA------TDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K EN LL + TDFGL IE G+ Y+APEVL ++ Y +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT 219
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W G +LY +L G+PPF++ ++D IL + + P I++SA+ L+ +L
Sbjct: 220 VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQ 275
Query: 294 QDPKKRI 300
+D KR+
Sbjct: 276 KDRTKRL 282
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G F + ++ T FA K + K L+ + ++ + EI I + L+ Q ++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 87
Query: 147 GAYEDKQSVHVVMELCAGGELFD------------------RIIAKGHYSERAAASICSK 188
G +ED V VV+ELC L + +I+ Y R + +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--RVIHR 145
Query: 189 D---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIW 237
D E+ +K DFGL+ +E +G+ + + G+ Y+APEVL ++ + E+D+W
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 205
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
S G I+Y LL G PPF K + I + + I+ A L+++ML DP
Sbjct: 206 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPT 261
Query: 298 KRITSAQVLEHPWIKEGGEASDKPI 322
R T ++L + G + PI
Sbjct: 262 ARPTINELLNDEFFTSGYIPARLPI 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G F + ++ T FA K + K L+ + ++ + EI I + L+ Q ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 83
Query: 147 GAYEDKQSVHVVMELCAGGELFD------------------RIIAKGHYSERAAASICSK 188
G +ED V VV+ELC L + +I+ Y R + +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--RVIHR 141
Query: 189 D---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIW 237
D E+ +K DFGL+ +E +G+ + + G+ Y+APEVL ++ + E+D+W
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
S G I+Y LL G PPF K + I + + I+ A L+++ML DP
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPT 257
Query: 298 KRITSAQVLEHPWIKEGGEASDKPI 322
R T ++L + G + PI
Sbjct: 258 ARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G F + ++ T FA K + K L+ + ++ + EI I + L+ Q ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 83
Query: 147 GAYEDKQSVHVVMELCAGGELFD------------------RIIAKGHYSERAAASICSK 188
G +ED V VV+ELC L + +I+ Y R + +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--RVIHR 141
Query: 189 D---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIW 237
D E+ +K DFGL+ +E +G+ + + G+ Y+APEVL ++ + E+D+W
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
S G I+Y LL G PPF K + I + + I+ A L+++ML DP
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPT 257
Query: 298 KRITSAQVLEHPWIKEGGEASDKPI 322
R T ++L + G + PI
Sbjct: 258 ARPTINELLNDEFFTSGYIPARLPI 282
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 35/265 (13%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D K Y+ +++G+G G Y + +TG++ A I + L + K+ I EI +M+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE 74
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
+ PNIV + +Y + VVME AGG L D ++ + E A++C
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 188 -----------KDENALL------KATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR 229
K +N LL K TDFG I + R +VG+ Y++APEV+ R+
Sbjct: 133 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG ++DIWS G++ ++ G PP+ E + ++ G + ++ +S+ +D
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDF 250
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIK 312
+ R L D +KR ++ ++++H ++K
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 35/265 (13%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
D K Y+ +++G+G G Y + +TG++ A I + L + K+ I EI +M+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE 74
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS-------- 187
+ PNIV + +Y + VVME AGG L D ++ + E A++C
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 188 -----------KDENALL------KATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR 229
K +N LL K TDFG I + R +VG+ Y++APEV+ R+
Sbjct: 133 LHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 192
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGDIDFESAPWPTISSSAKDL 287
YG ++DIWS G++ ++ G PP+ E + ++ G + ++ +S+ +D
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDF 250
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIK 312
+ R L D +KR ++ ++++H ++K
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E++ K+ F+ D D G IT EL + LG TEAE++ +M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GT+D+ EF+ + K + ++ + +AF+ FDKD +GF++ EL M G D+
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
+ E+I DTD DG++NY+EF ++ S
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVLVS 147
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G F + ++ T FA K + K L+ + ++ + EI I + L+ Q ++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 105
Query: 147 GAYEDKQSVHVVMELCAGGELFD------------------RIIAKGHYSERAAASICSK 188
G +ED V VV+ELC L + +I+ Y R + +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--RVIHR 163
Query: 189 D---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIW 237
D E+ +K DFGL+ +E +G+ + + G+ Y+APEVL ++ + E+D+W
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 223
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
S G I+Y LL G PPF K + I + + I+ A L+++ML DP
Sbjct: 224 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPT 279
Query: 298 KRITSAQVLEHPWIKEGGEASDKPI 322
R T ++L + G + PI
Sbjct: 280 ARPTINELLNDEFFTSGYIPARLPI 304
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G F + ++ T FA K + K L+ + ++ + EI I + L+ Q ++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 107
Query: 147 GAYEDKQSVHVVMELCAGGELFD------------------RIIAKGHYSERAAASICSK 188
G +ED V VV+ELC L + +I+ Y R + +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--RVIHR 165
Query: 189 D---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIW 237
D E+ +K DFGL+ +E +G+ + + G+ Y+APEVL ++ + E+D+W
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 225
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
S G I+Y LL G PPF K + I + + I+ A L+++ML DP
Sbjct: 226 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPT 281
Query: 298 KRITSAQVLEHPWIKEGGEASDKPI 322
R T ++L + G + PI
Sbjct: 282 ARPTINELLNDEFFTSGYIPARLPI 306
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 36/270 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G F + ++ T FA K + K L+ + ++ + EI I + L+ Q ++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 81
Query: 147 GAYEDKQSVHVVMELCAGGELFD------------------RIIAKGHYSERAAASICSK 188
G +ED V VV+ELC L + +I+ Y R + +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--RVIHR 139
Query: 189 D---------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIW 237
D E+ +K DFGL+ +E +G+ + + G+ Y+APEVL ++ + E+D+W
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 199
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
S G I+Y LL G PPF K + I + + I+ A L+++ML DP
Sbjct: 200 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPT 255
Query: 298 KRITSAQVLEHPWIKEGGEASDKPIDSAVL 327
R T ++L + G + PI +
Sbjct: 256 ARPTINELLNDEFFTSGYIPARLPITCLTI 285
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL LG TEAE+Q + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL + G D+
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFC 487
+ E I E D D DG++NY+EF
Sbjct: 121 VDEXIREADIDGDGQVNYEEFV 142
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 31/247 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
++F LG+G FG L T +A K + K ++ +D + E +++ L P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------- 187
+ + ++ ++ VME GG+L I G + E A +
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 188 ------KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
K +N +L K DFG+ + +G R+ G+ Y+APE++ + YGK
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W+ GV+LY +L+G PPF E E +F +I++ ++ + ++S A + + ++T
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMT 256
Query: 294 QDPKKRI 300
+ P KR+
Sbjct: 257 KHPAKRL 263
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ LS E+I K+ F D D G IT EEL + L TE E+Q ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTI++ EF++ + K + ++ L +AF+ FDKD +G+I+ EL M + G D+
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRS 492
++++I E D D DG++NY+EF MM +
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMT 147
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL LG TEAE+Q + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL + G D+
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 466 IKEIISEVDTDNDGRINYDEFC 487
+ + I E D D DG++NY+EF
Sbjct: 122 VDQXIREADIDGDGQVNYEEFV 143
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 91/145 (62%), Gaps = 6/145 (4%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+ Q +++ F DTD SGTI +ELK + LG + + E+++++ D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 411 DYIEFITATMHRHKL-ERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
D+ EF+ TM K+ ERD + + KAF+ FD DNSG ITI +L K+ G ++ +
Sbjct: 82 DFEEFL--TMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL 139
Query: 467 KEIISEVDTDNDGRINYDEFCAMMR 491
+E+I+E D ++D I+ DEF +M+
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIMK 164
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 127/312 (40%), Gaps = 82/312 (26%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD--DIKREIQIMQHLSG 138
Y +G+G +GV + EN T A K ++K K+ N KD IK E+++M+ L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH- 86
Query: 139 QPNIVEFKGAYE------------------DKQSVH------------VVMELCAGGE-- 166
PNI YE DK +V V ++C E
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 167 --------------------------LFDRIIAKGHYSERAAASICSKD---ENAL---- 193
+ +I + HY IC +D EN L
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRDIKPENFLFSTN 204
Query: 194 ----LKATDFGLS---VFIEEGKVY--RDIVGSAYYVAPEVLR---RRYGKEIDIWSAGV 241
+K DFGLS + G+ Y G+ Y+VAPEVL YG + D WSAGV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 242 ILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRIT 301
+L++LL G PF + +L + FE+ + +S A+DL+ +L ++ +R
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324
Query: 302 SAQVLEHPWIKE 313
+ + L+HPWI +
Sbjct: 325 AMRALQHPWISQ 336
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D G IT ++L + LG TEAE+Q ++ DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 409 TIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTI 466
TID+ +F+T + K + ++ + +AF+ F KD +G+I+ +L M + G D+ +
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Query: 467 KEIISEVDTDNDGRINYDEFCAMMRS 492
E+I E D DG++NY++F MM +
Sbjct: 423 DEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL LG TEAE+Q + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
GTI++ EF+T K + ++ + +AF+ FDKD +G+I+ EL + G D+
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 466 IKEIISEVDTDNDGRINYDEF 486
+ E I E D D DG++NY+EF
Sbjct: 121 VDEXIREADIDGDGQVNYEEF 141
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFI 416
+++ F D D +G I+ EL+ LG KLT+ EV + + AD+DG+G ++Y EF+
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 32/244 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +GRG FG L ST + +A K +SK +++ ++D E IM + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGEL------------------------FDRIIAKGH 176
+V+ A++D + +++VME GG+L D I + G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 177 YSERAAASICSKDENALLKATDFGLSVFI-EEGKVYRDI-VGSAYYVAPEVLRRR----- 229
D++ LK DFG + + +EG V D VG+ Y++PEVL+ +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YG+E D WS GV LY +L G PF+A++ G + I+ IS AK+L+
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 314
Query: 290 RMLT 293
LT
Sbjct: 315 AFLT 318
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +GRG FG L ++ + +A K +SK +++ ++D E IM + P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI--------IAKGHYSERAAA--SICS--- 187
+V+ A++D + +++VME GG+L + + AK + +E A +I S
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 188 -----KDENAL------LKATDFGLSVFIEE-GKVYRDI-VGSAYYVAPEVLRRR----- 229
K +N L LK DFG + ++E G V+ D VG+ Y++PEVL+ +
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGY 255
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YG+E D WS GV L+ +L G PF+A++ G + I+ IS AK+L+
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLIC 315
Query: 290 RMLTQDPKK--RITSAQVLEHPWIK 312
LT + R ++ +HP+ K
Sbjct: 316 AFLTDREVRLGRNGVEEIKQHPFFK 340
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 32/244 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +GRG FG L ST + +A K +SK +++ ++D E IM + P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 129
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGEL------------------------FDRIIAKGH 176
+V+ A++D + +++VME GG+L D I + G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 189
Query: 177 YSERAAASICSKDENALLKATDFGLSVFI-EEGKVYRDI-VGSAYYVAPEVLRRR----- 229
D++ LK DFG + + +EG V D VG+ Y++PEVL+ +
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YG+E D WS GV LY +L G PF+A++ G + I+ IS AK+L+
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 309
Query: 290 RMLT 293
LT
Sbjct: 310 AFLT 313
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 32/244 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +GRG FG L ST + +A K +SK +++ ++D E IM + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGEL------------------------FDRIIAKGH 176
+V+ A++D + +++VME GG+L D I + G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 177 YSERAAASICSKDENALLKATDFGLSVFI-EEGKVYRDI-VGSAYYVAPEVLRRR----- 229
D++ LK DFG + + +EG V D VG+ Y++PEVL+ +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
YG+E D WS GV LY +L G PF+A++ G + I+ IS AK+L+
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 314
Query: 290 RMLT 293
LT
Sbjct: 315 AFLT 318
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------IAKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 63
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 242
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 243 ILVENPSARITIPDIKKDRW 262
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------IAKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------IAKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------IAKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------IAKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G +G L T A K + ++ V + ++IK+EI I L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINAMLNHE- 65
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------IAKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 188 ------KDENAL------LKATDFGLSVFIEEG---KVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ ++ + G+ YVAPE+L+RR +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 245 ILVENPSARITIPDIKKDRW 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G G L T A K + ++ V + ++IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHE- 64
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAASICS---- 187
N+V+F G + ++ +E C+GGELFDRI A+ + + A +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 188 ------KDENAL------LKATDFGLSV---FIEEGKVYRDIVGSAYYVAPEVLRRR--Y 230
K EN L LK +DFGL+ + ++ + G+ YVAPE+L+RR +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ +D+WS G++L +L+G P W + + + PW I S+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 291 MLTQDPKKRITSAQVLEHPW 310
+L ++P RIT + + W
Sbjct: 244 ILVENPSARITIPDIKKDRW 263
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 39/273 (14%)
Query: 75 EDVKL-HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM 133
EDV H+ + +G+G FG + +N T + +A K ++K+K V +N+ ++ +E+QIM
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 134 QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAA-SICS----- 187
Q L P +V +++D++ + +V++L GG+L + H+ E IC
Sbjct: 70 QGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMAL 128
Query: 188 -------------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR 228
K +N LL TDF ++ + + G+ Y+APE+
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188
Query: 229 R----YGKEIDIWSAGVILYILLSGVPPFW---AETEKGIFDAILQGDIDFESAPWPTIS 281
R Y +D WS GV Y LL G P+ + + K I + + SA W S
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA-W---S 244
Query: 282 SSAKDLVRRMLTQDPKKRITS-AQVLEHPWIKE 313
L++++L +P +R + + V P++ +
Sbjct: 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 42/289 (14%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ 134
ED +LH K LG+G FG +L T + FA K++ K ++ +D + E +++
Sbjct: 18 EDFELH----KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL---------FDRIIAKGHYSE------ 179
P + ++ K+++ VME GG+L FD A + +E
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 180 -RAAASICSKD---ENALL------KATDFGLSV--FIEEGKVYRDIVGSAYYVAPEVLR 227
+ I +D +N LL K DFG+ + + K + G+ Y+APE+L
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPEILL 192
Query: 228 -RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP-WPTISSSAK 285
++Y +D WS GV+LY +L G PF + E+ +F +I +D P W + AK
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAK 247
Query: 286 DLVRRMLTQDPKKRI-TSAQVLEHPWIKEGG--EASDKPIDSAVLSRMK 331
DL+ ++ ++P+KR+ + +HP +E E K ID ++K
Sbjct: 248 DLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 296
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 34/260 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G FG C +TG+ +ACK + K+++ + + E QI++ ++ + +V
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLA 250
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSE-RA---AASICS------------- 187
AYE K ++ +V+ L GG+L I G + E RA AA IC
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 188 --KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR-RYGKEIDIWS 238
K EN LL + +D GL+V + EG+ + VG+ Y+APEV++ RY D W+
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G +LY +++G PF +K + + + + S A+ L ++L +DP +
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAE 430
Query: 299 RI-----TSAQVLEHPWIKE 313
R+ ++ +V EHP K+
Sbjct: 431 RLGCRGGSAREVKEHPLFKK 450
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 34/260 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G FG C +TG+ +ACK + K+++ + + E QI++ ++ + +V
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLA 250
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSE-RA---AASICS------------- 187
AYE K ++ +V+ L GG+L I G + E RA AA IC
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 188 --KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWS 238
K EN LL + +D GL+V + EG+ + VG+ Y+APEV++ RY D W+
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 239 AGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKK 298
G +LY +++G PF +K + + + + S A+ L ++L +DP +
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAE 430
Query: 299 RI-----TSAQVLEHPWIKE 313
R+ ++ +V EHP K+
Sbjct: 431 RLGCRGGSAREVKEHPLFKK 450
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 31/247 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
++F LG+G FG L T +A K + K ++ +D + E +++ P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------------ 188
+ + ++ ++ VME GG+L I G + E A ++
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 189 -------------DENALLKATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
D +K DFG+ I +G + G+ Y+APE++ + YGK
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W+ GV+LY +L+G PF E E +F +I++ ++ + ++S A + + ++T
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMT 257
Query: 294 QDPKKRI 300
+ P KR+
Sbjct: 258 KHPGKRL 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 31/247 (12%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
++F LG+G FG L T +A K + K ++ +D + E +++ P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK------------ 188
+ + ++ ++ VME GG+L I G + E A ++
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 189 -------------DENALLKATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 233
D +K DFG+ I +G + G+ Y+APE++ + YGK
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
+D W+ GV+LY +L+G PF E E +F +I++ ++ + ++S A + + ++T
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMT 578
Query: 294 QDPKKRI 300
+ P KR+
Sbjct: 579 KHPGKRL 585
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 10/147 (6%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+ Q +++ F DTD SGTI +ELK + LG + + E+++++ D DG+GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 411 DYIEFI---TATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
D+ EF+ TA M ERD + + KAF+ FD D +G I+ L+ K+ G D+
Sbjct: 62 DFEEFLQMMTAKMG----ERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDE 117
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMMR 491
++E+I E D D DG +N +EF +M+
Sbjct: 118 ELQEMIDEADRDGDGEVNEEEFFRIMK 144
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 42/289 (14%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ 134
ED LH K LG+G FG +L T + FA K++ K ++ +D + E +++
Sbjct: 17 EDFILH----KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL---------FDRIIAKGHYSE------ 179
P + ++ K+++ VME GG+L FD A + +E
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 180 -RAAASICSKD---ENALL------KATDFGLSV--FIEEGKVYRDIVGSAYYVAPEVLR 227
+ I +D +N LL K DFG+ + + K G+ Y+APE+L
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEILL 191
Query: 228 -RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP-WPTISSSAK 285
++Y +D WS GV+LY +L G PF + E+ +F +I +D P W + AK
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAK 246
Query: 286 DLVRRMLTQDPKKRI-TSAQVLEHPWIKEGG--EASDKPIDSAVLSRMK 331
DL+ ++ ++P+KR+ + +HP +E E K ID ++K
Sbjct: 247 DLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 295
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 85.1 bits (209), Expect = 8e-17, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+++NL+ E+I K+ F D DNSG+I+ EL + LG +EAEV LM DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 407 NGTIDYIEFITATMHRHKL-ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
N I++ EF+ + K + + L +AF+ FDK+ G I+ EL+ + G D
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMM 490
+ E++ EV +D G IN +F A++
Sbjct: 121 EVDEMLREV-SDGSGEINIKQFAALL 145
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 38/255 (14%)
Query: 80 HYSFGKELGRGQFGVTYLC---TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHL 136
H+ K LG+G FG +L T +G +A K + K L + D+ K E I+ +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR-DRVRTKMERDILADV 87
Query: 137 SGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER---------------- 180
+ P +V+ A++ + ++++++ GG+LF R+ + ++E
Sbjct: 88 N-HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 181 AAASICSKD---ENALL------KATDFGLS--VFIEEGKVYRDIVGSAYYVAPEVLRRR 229
+ I +D EN LL K TDFGLS E K Y G+ Y+APEV+ R+
Sbjct: 147 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVEYMAPEVVNRQ 205
Query: 230 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
+ D WS GV+++ +L+G PF + K IL+ + +S+ A+ L+
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSLL 261
Query: 289 RRMLTQDPKKRITSA 303
R + ++P R+ S
Sbjct: 262 RALFKRNPANRLGSG 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 57/286 (19%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLV--------------------- 118
Y+ E+G+G +GV L + +A K +SK+KL+
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 119 --TKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVM--ELCAGGELFD----- 169
+ + + +EI I++ L PN+V+ +D H+ M EL G + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 170 -----------RIIAKG----HYSERAAASICSKD----ENALLKATDFGLSV-FIEEGK 209
+ + KG HY + I + E+ +K DFG+S F
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 210 VYRDIVGSAYYVAPEVL---RRRY-GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 265
+ + VG+ ++APE L R+ + GK +D+W+ GV LY + G PF E + I
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 266 LQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
++F P I+ KDL+ RML ++P+ RI ++ HPW+
Sbjct: 253 KSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 49/269 (18%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
++LG G +G Y TG+ A K + ++D +I +EI IMQ P++V+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQCDS-PHVVK 88
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRI-IAKGHYSERAAASICS---------------- 187
+ G+Y + +VME C G + D I + +E A+I
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 188 ---KDENALL------KATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRR-RYGKEIDI 236
K N LL K DFG++ + + R+ ++G+ +++APEV++ Y DI
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 237 WSAGVILYILLSGVPPFW-AETEKGIFDAILQGDIDFESAPWPTI------SSSAKDLVR 289
WS G+ + G PP+ + IF + P PT S + D V+
Sbjct: 209 WSLGITAIEMAEGKPPYADIHPMRAIFM--------IPTNPPPTFRKPELWSDNFTDFVK 260
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEAS 318
+ L + P++R T+ Q+L+HP+++ S
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTE--NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
+ K LG+G FG +L + S RQ + K+ + D+ K E I+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 84
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAA------ 183
P IV+ A++ + ++++++ GG+LF R+ K + +E A A
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 184 -SICSKD---ENALL------KATDFGLS--VFIEEGKVYRDIVGSAYYVAPEVLRRR-Y 230
I +D EN LL K TDFGLS E K Y G+ Y+APEV+ RR +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRGH 203
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ D WS GV+++ +L+G PF + K IL+ + +S A+ L+R
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSLLRM 259
Query: 291 MLTQDPKKRI 300
+ ++P R+
Sbjct: 260 LFKRNPANRL 269
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
+ NL+ E+I K+ F D DN+G+I+ EL + LG +EAEV LM DVDGN
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 408 GTIDYIEFITATMHRHKLERDD--HLYKAFQHFDKDNSGFITIDELEIAMKDYG--MGD- 462
I++ EF+ A M R D L +AF+ FDK+ G I+ EL+ + G + D
Sbjct: 62 HQIEFSEFL-ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 463 --DDTIKEIISEVDTDNDGRINYDEFCAMMRSGT 494
DD ++E+ +D G IN +F A++ G+
Sbjct: 121 EVDDMLREV-----SDGSGEINIQQFAALLSKGS 149
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTE--NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
+ K LG+G FG +L + S RQ + K+ + D+ K E I+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 84
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAA------ 183
P IV+ A++ + ++++++ GG+LF R+ K + +E A A
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 184 -SICSKD---ENALL------KATDFGLS--VFIEEGKVYRDIVGSAYYVAPEVLRRR-Y 230
I +D EN LL K TDFGLS E K Y G+ Y+APEV+ RR +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRGH 203
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ D WS GV+++ +L+G PF + K IL+ + +S A+ L+R
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 259
Query: 291 MLTQDPKKRI 300
+ ++P R+
Sbjct: 260 LFKRNPANRL 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTE--NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
+ K LG+G FG +L + S RQ + K+ + D+ K E I+ ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 85
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRII---------AKGHYSERAAA------ 183
P IV+ A++ + ++++++ GG+LF R+ K + +E A A
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 184 -SICSKD---ENALL------KATDFGLS--VFIEEGKVYRDIVGSAYYVAPEVLRRR-Y 230
I +D EN LL K TDFGLS E K Y G+ Y+APEV+ RR +
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRGH 204
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
+ D WS GV+++ +L+G PF + K IL+ + +S A+ L+R
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 260
Query: 291 MLTQDPKKRI 300
+ ++P R+
Sbjct: 261 LFKRNPANRL 270
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+I K F D + +G I EL + LG TEAE+Q L+ A+ + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 411 DYIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIK 467
++ EF M + E D + + +AF+ FD+D GFI+ EL M + G D+ I
Sbjct: 64 NFTEF-CGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 468 EIISEVDTDNDGRINYDEFCAMM 490
E+I E D D DG INY+EF M+
Sbjct: 123 EMIREADFDGDGMINYEEFVWMI 145
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 65/293 (22%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----REIQIMQHLSGQPN 141
++G G +GV + C TG+ A K K + D IK REI++++ L PN
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIK-----KFLESEDDPVIKKIALREIRMLKQLK-HPN 63
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGEL--FDR--------IIAKGHYSERAAASICSKD-- 189
+V + K+ +H+V E C L DR ++ + A + C K
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 190 -------------ENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVL--RRRYGKE 233
+++++K DFG + + Y D V + +Y +PE+L +YG
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP 183
Query: 234 IDIWSAGVILYILLSGVPPFWAETE--------KGIFDAILQGDIDFESAPW-------- 277
+D+W+ G + LLSGVP + +++ K + D I + F + +
Sbjct: 184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243
Query: 278 -----------PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASD 319
P IS A L++ L DP +R+T Q+L HP+ + E D
Sbjct: 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
+ NL+ E+I K+ F D DN+G+I+ EL + LG +EAEV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 408 GTIDYIEFITATMHRHKLERDD--HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDD 464
I++ EF+ A M R D L +AF+ FDK+ G I+ EL+ + G D
Sbjct: 61 HQIEFSEFL-ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 465 TIKEIISEVDTDNDGRINYDEFCAMM 490
+ +++ EV +D G IN +F A++
Sbjct: 120 EVDDMLREV-SDGSGEINIQQFAALL 144
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 51/269 (18%)
Query: 71 GKPY----EDVKLH---YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK 123
KP+ + ++LH + K +GRG FG + + + FA K ++K +++ + +
Sbjct: 59 AKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET 118
Query: 124 DDIKREIQIMQHLSGQPN-IVEFKGAYEDKQSVHVVMELCAGGELF-------DRI---- 171
+ E ++ ++G I A++D ++++VM+ GG+L DR+
Sbjct: 119 ACFREERDVL--VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM 176
Query: 172 --------------IAKGHYSER-AAASICSKDENALLKATDFGLSV-FIEEGKVYRDI- 214
+ + HY R D N ++ DFG + +E+G V +
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 215 VGSAYYVAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 268
VG+ Y++PE+L+ RYG E D WS GV +Y +L G PF+AE+ + I+
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 269 DIDFESAPWPT----ISSSAKDLVRRMLT 293
F+ +PT +S +AKDL+RR++
Sbjct: 297 KERFQ---FPTQVTDVSENAKDLIRRLIC 322
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 124/297 (41%), Gaps = 50/297 (16%)
Query: 50 AAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFAC 109
AAP + L T GK E ++ Y G LG G FG Y S A
Sbjct: 1 GAAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 54
Query: 110 KSISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG- 164
K + K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 55 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 114
Query: 165 GELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATD 198
+LFD I +G E A S C KDEN L LK D
Sbjct: 115 QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 174
Query: 199 FGLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAE 256
FG +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 175 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 257 TEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 234 EE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
D+ EF+ + + K + ++ L F+ FDK+ GFI I+EL ++ G ++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMR 491
I++++ + D +NDGRI++DEF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 272 FESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMK 331
F++ IS+ V RML Q+P K A I+E E ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDA------IIEEVDEDGSGTID------FE 76
Query: 332 QFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLT 391
+F M + +K A+ S EE+ ++F D + G I EEL L G +T
Sbjct: 77 EFLVMMVRQ---MKEDAKGKSEEELANCFRIF---DKNADGFIDIEELGEILRATGEHVT 130
Query: 392 EAEVQQLMEAADVDGNGTIDYIEFI 416
E +++ LM+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 493 GTQPQAK 499
+ AK
Sbjct: 85 QMKEDAK 91
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 29 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 111 SISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 83 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 142
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 203 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 262 E------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
D+ EF+ + + K + ++ L F+ FDK+ GFI I+EL ++ G ++
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMR 491
I++++ + D +NDGRI++DEF MM
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 272 FESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMK 331
F++ IS+ V RML Q+P K A I+E E ID +
Sbjct: 26 FDADGGGDISTKELGTVMRMLGQNPTKEELDA------IIEEVDEDGSGTID------FE 73
Query: 332 QFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLT 391
+F M + +K A+ S EE+ ++F D + G I EEL L G +T
Sbjct: 74 EFLVMMVRQ---MKEDAKGKSEEELANCFRIF---DKNADGFIDIEELGEILRATGEHVT 127
Query: 392 EAEVQQLMEAADVDGNGTIDYIEFI 416
E +++ LM+ +D + +G ID+ EF+
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFL 152
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 22 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 493 GTQPQAK 499
+ AK
Sbjct: 82 QMKEDAK 88
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L T GK E ++ Y G LG G FG Y S A K
Sbjct: 1 AAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 54
Query: 111 SISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 55 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 114
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 175 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 234 E------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 49/278 (17%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ 134
ED ++ Y+ +G G +G S G+ K + + T+ +K + E+ +++
Sbjct: 6 EDYEVLYT----IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR 60
Query: 135 HLSGQPNIVEFKGAYEDKQ--SVHVVMELCAGGELFDRIIAKG----------------- 175
L PNIV + D+ ++++VME C GG+L +I KG
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMT 118
Query: 176 ---------HYSERAAASICSKD---ENALL------KATDFGLSVFIEEGKVY-RDIVG 216
H ++ +D N L K DFGL+ + + + ++ VG
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 217 SAYYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
+ YY++PE + R Y ++ DIWS G +LY L + +PPF A ++K + I +G F
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRI 236
Query: 276 PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
P+ S +++ RML R + ++LE+P I E
Sbjct: 237 PY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 14 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 188 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 247 E------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
D+ EF+ + + K + ++ L F+ FDK+ GFI I+EL ++ G ++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMR 491
I++++ + D +NDGRI++DEF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 272 FESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMK 331
F++ IS+ V RML Q+P K A I+E E ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDA------IIEEVDEDGSGTID------FE 76
Query: 332 QFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLT 391
+F M + +K A+ S EE L F D + G I EEL L G +T
Sbjct: 77 EFLVMMVRQ---MKEDAKGKSEEE---LADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 392 EAEVQQLMEAADVDGNGTIDYIEFI 416
E +++ LM+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 493 GTQPQAK 499
+ AK
Sbjct: 85 QMKEDAK 91
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 47 PTPAAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQ 106
P PA LK PD + K +D + +S +E+G G FG Y +
Sbjct: 28 PMPAGGRAGSLKD----PDVAELFFK--DDPEKLFSDLREIGHGSFGAVYFARDVRNSEV 81
Query: 107 FACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAG-- 164
A K +S + DI +E++ +Q L PN ++++G Y + + +VME C G
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA 140
Query: 165 GELFD---------RIIAKGHYSERAAASICSKD--------------ENALLKATDFGL 201
+L + I A H + + A + S + E L+K DFG
Sbjct: 141 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 202 SVFIEEGKVYRDIVGSAYYVAPEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAET 257
+ + + VG+ Y++APEV+ +Y ++D+WS G+ L PP +
Sbjct: 201 ASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257
Query: 258 EKGIFDAILQGDID-FESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
I Q + +S W S ++ V L + P+ R TS +L+H ++
Sbjct: 258 AMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDEL-EI--AMKDYGMGDD 463
D+ EF+ + + K + ++ L F+ FDK+ GFI I+EL EI A ++ + +D
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 464 DTIKEIISEVDTDNDGRINYDEFCAMMR 491
I++++ + D +NDGRI++DEF MM
Sbjct: 134 --IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 493 GTQPQAK 499
+ AK
Sbjct: 85 QMKEDAK 91
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 272 FESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMK 331
F++ IS+ V RML Q+P K A I+E E ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDA------IIEEVDEDGSGTID------FE 76
Query: 332 QFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLT 391
+F M + +K A+ S EE+ ++F D + G I EEL L G +
Sbjct: 77 EFLVMMVRQ---MKEDAKGKSEEELANCFRIF---DKNADGFIDIEELGEILRATGEHVI 130
Query: 392 EAEVQQLMEAADVDGNGTIDYIEFI 416
E +++ LM+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
D+ EF+ + + K + ++ L F+ FDK+ GFI I+EL ++ G ++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMR 491
I++++ + D +NDGRI++DEF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 272 FESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMK 331
F++ IS+ V RML Q+P K A I+E E ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDA------IIEEVDEDGSGTID------FE 76
Query: 332 QFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLT 391
+F M + +K A+ S EE++ ++F D + G I EEL L G +T
Sbjct: 77 EFLVMMVRQ---MKEDAKGKSEEELEDCFRIF---DKNADGFIDIEELGEILRATGEHVT 130
Query: 392 EAEVQQLMEAADVDGNGTIDYIEFI 416
E +++ LM+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 493 GTQPQAK 499
+ AK
Sbjct: 85 QMKEDAK 91
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 118/276 (42%), Gaps = 44/276 (15%)
Query: 71 GKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR-- 128
GK E ++ Y G LG G FG Y S A K + K ++ + + R
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 129 -EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI 185
E+ +++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 186 -------------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAY 219
C KDEN L LK DFG +++ VY D G+
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 213
Query: 220 YVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPW 277
Y PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 264
Query: 278 PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+SS + L+R L P R T ++ HPW+++
Sbjct: 265 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 49/278 (17%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ 134
ED ++ Y+ +G G +G S G+ K + + T+ +K + E+ +++
Sbjct: 6 EDYEVLYT----IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR 60
Query: 135 HLSGQPNIVEFKGAYEDKQ--SVHVVMELCAGGELFDRIIAKG----------------- 175
L PNIV + D+ ++++VME C GG+L +I KG
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMT 118
Query: 176 ---------HYSERAAASICSKD---ENALL------KATDFGLSVFIEEGKVY-RDIVG 216
H ++ +D N L K DFGL+ + + + VG
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 217 SAYYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
+ YY++PE + R Y ++ DIWS G +LY L + +PPF A ++K + I +G F
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRI 236
Query: 276 PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
P+ S +++ RML R + ++LE+P I E
Sbjct: 237 PY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 49/278 (17%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ 134
ED ++ Y+ +G G +G S G+ K + + T+ +K + E+ +++
Sbjct: 6 EDYEVLYT----IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR 60
Query: 135 HLSGQPNIVEFKGAYEDKQ--SVHVVMELCAGGELFDRIIAKG----------------- 175
L PNIV + D+ ++++VME C GG+L +I KG
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMT 118
Query: 176 ---------HYSERAAASICSKD---ENALL------KATDFGLSVFIEEGKVY-RDIVG 216
H ++ +D N L K DFGL+ + + + VG
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 178
Query: 217 SAYYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
+ YY++PE + R Y ++ DIWS G +LY L + +PPF A ++K + I +G F
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRI 236
Query: 276 PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
P+ S +++ RML R + ++LE+P I E
Sbjct: 237 PY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 14 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 188 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 247 E------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 15 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 189 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 248 E------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 14 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 188 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 247 E------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 15 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 189 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +SS + L+R L P R T ++ HPW+++
Sbjct: 248 E------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 123/297 (41%), Gaps = 50/297 (16%)
Query: 50 AAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFAC 109
AAP + L T GK E ++ Y G LG G FG Y S A
Sbjct: 1 GAAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 54
Query: 110 KSISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG- 164
K + K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 55 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 114
Query: 165 GELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATD 198
+LFD I +G E A S C KDEN L LK D
Sbjct: 115 QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 174
Query: 199 FGLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAE 256
FG +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 175 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 257 TEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +S + L+R L P R T ++ HPW+++
Sbjct: 234 EE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+GRG + L T R +A K + K + D D ++ E + + S P +V
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 147 GAYEDKQSVHVVMELCAGGELFDRI-------------------IAKGHYSERAAASICS 187
++ + + V+E GG+L + +A + ER
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 188 KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSA 239
K +N LL K TD+G+ + G G+ Y+APE+LR YG +D W+
Sbjct: 137 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 196
Query: 240 GVILYILLSGVPPF---------WAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
GV+++ +++G PF TE +F IL+ I ++S A +++
Sbjct: 197 GVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKS 252
Query: 291 MLTQDPKKRITS------AQVLEHPWIK 312
L +DPK+R+ A + HP+ +
Sbjct: 253 FLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L T GK E ++ Y G LG G FG Y S A K
Sbjct: 1 AAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 54
Query: 111 SISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 55 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 114
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 175 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +S + L+R L P R T ++ HPW+++
Sbjct: 234 E------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L T GK E ++ Y G LG G FG Y S A K
Sbjct: 34 AAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 87
Query: 111 SISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 88 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 147
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 208 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 266
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +S + L+R L P R T ++ HPW+++
Sbjct: 267 E------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 123/297 (41%), Gaps = 50/297 (16%)
Query: 50 AAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFAC 109
AAP + L T GK E ++ Y G LG G FG Y S A
Sbjct: 1 GAAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 54
Query: 110 KSISKRKLVTKNDKDDIKR---EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG- 164
K + K ++ + + R E+ +++ +S G ++ +E S +++E
Sbjct: 55 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 114
Query: 165 GELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATD 198
+LFD I +G E A S C KDEN L LK D
Sbjct: 115 QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 174
Query: 199 FGLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAE 256
FG +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 175 FGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 257 TEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +S + L+R L P R T ++ HPW+++
Sbjct: 234 EE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 118/275 (42%), Gaps = 44/275 (16%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR--- 128
K E ++ Y G LG G FG Y S A K + K ++ + + R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVME-LCAGGELFDRIIAKGHYSERAAASI- 185
E+ +++ +S G ++ +E S +++E + +LFD I +G E A S
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 186 ------------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYY 220
C KDEN L LK DFG +++ VY D G+ Y
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 179
Query: 221 VAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 229
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+SS + L+R L P R T ++ HPW+++
Sbjct: 230 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L T GK E ++ Y G LG G FG Y S A K
Sbjct: 29 AAPCNDLHA------TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 83 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 142
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 203 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I++G + F +S + L+R L P R T ++ HPW+++
Sbjct: 262 E------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+GRG + L T R +A K + K + D D ++ E + + S P +V
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 147 GAYEDKQSVHVVMELCAGGELFDRI-------------------IAKGHYSERAAASICS 187
++ + + V+E GG+L + +A + ER
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 132
Query: 188 KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSA 239
K +N LL K TD+G+ + G G+ Y+APE+LR YG +D W+
Sbjct: 133 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 192
Query: 240 GVILYILLSGVPPF---------WAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
GV+++ +++G PF TE +F IL+ I ++S A +++
Sbjct: 193 GVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKS 248
Query: 291 MLTQDPKKRITS------AQVLEHPWIK 312
L +DPK+R+ A + HP+ +
Sbjct: 249 FLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+GRG + L T R +A K + K + D D ++ E + + S P +V
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 147 GAYEDKQSVHVVMELCAGGELFDRI-------------------IAKGHYSERAAASICS 187
++ + + V+E GG+L + +A + ER
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 147
Query: 188 KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSA 239
K +N LL K TD+G+ + G G+ Y+APE+LR YG +D W+
Sbjct: 148 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 207
Query: 240 GVILYILLSGVPPF---------WAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
GV+++ +++G PF TE +F IL+ I ++S A +++
Sbjct: 208 GVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKAASVLKS 263
Query: 291 MLTQDPKKRITS------AQVLEHPWIK 312
L +DPK+R+ A + HP+ +
Sbjct: 264 FLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 44/272 (16%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR---EIQ 131
E ++ Y G LG G FG Y S A K + K ++ + + R E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 132 IMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI---- 185
+++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 186 ---------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
C KDEN L LK DFG +++ VY D G+ Y P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 183
Query: 224 EVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
E +R R +G+ +WS G++LY ++ G PF + E I++G + F +S
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVS 233
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
S + L+R L P R T ++ HPW+++
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+GRG + L T R +A + + K + D D ++ E + + S P +V
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 147 GAYEDKQSVHVVMELCAGGELFDRI-------------------IAKGHYSERAAASICS 187
++ + + V+E GG+L + +A + ER
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 179
Query: 188 KDENALL------KATDFGLSV-FIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSA 239
K +N LL K TD+G+ + G G+ Y+APE+LR YG +D W+
Sbjct: 180 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239
Query: 240 GVILYILLSGVPPF---------WAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRR 290
GV+++ +++G PF TE +F IL+ I ++S A +++
Sbjct: 240 GVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKS 295
Query: 291 MLTQDPKKRITS------AQVLEHPWIK 312
L +DPK+R+ A + HP+ +
Sbjct: 296 FLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 44/272 (16%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD-----IKREIQIMQH 135
YS LG G FG + + ++ K I K K++ +D + EI I+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGG-ELFDRIIAKGHYSERAAASICS------- 187
+ NI++ +E++ +VME G +LF I E A+ I
Sbjct: 86 VE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 188 ------------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--R 227
KDEN ++ K DFG + ++E GK++ G+ Y APEVL
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
G E+++WS GV LY L+ PF E E+ + AI P +S L
Sbjct: 205 PYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HPPYLVSKELMSL 254
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASD 319
V +L P++R T +++ PW+ + +D
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPWVTQPVNLAD 286
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 44/275 (16%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD---IKR 128
K E ++ Y G LG G FG Y S A K + K ++ + + +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI- 185
E+ +++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 186 ------------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYY 220
C KDEN L LK DFG +++ VY D G+ Y
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 221 VAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 230
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+SS + L+R L P R T ++ HPW+++
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 44/275 (16%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR--- 128
K E ++ Y G LG G FG Y S A K + K ++ + + R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI- 185
E+ +++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 186 ------------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYY 220
C KDEN L LK DFG +++ VY D G+ Y
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 221 VAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 230
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+SS + L+R L P R T ++ HPW+++
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 15 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 189 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +S + L+R L P R T ++ HPW+++
Sbjct: 248 E------IIGGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 15 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 189 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +S + L+R L P R T ++ HPW+++
Sbjct: 248 E------IIGGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 51 AAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACK 110
AAP + L P GK E ++ Y G LG G FG Y S A K
Sbjct: 14 AAPCNDLHATKLAP------GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 111 SISKRKLVTKNDKDD---IKREIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-G 165
+ K ++ + + + E+ +++ +S G ++ +E S +++E
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 166 ELFDRIIAKGHYSERAAASI-------------CS------KDENAL-------LKATDF 199
+LFD I +G E A S C KDEN L LK DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 200 GLSVFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAET 257
G +++ VY D G+ Y PE +R R +G+ +WS G++LY ++ G PF +
Sbjct: 188 GSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 258 EKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
E I+ G + F +S + L+R L P R T ++ HPW+++
Sbjct: 247 E------IIGGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 44/275 (16%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR--- 128
K E ++ Y G LG G FG Y S A K + K ++ + + R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI- 185
E+ +++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 186 ------------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYY 220
C KDEN L LK DFG +++ VY D G+ Y
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 179
Query: 221 VAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 229
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+SS + L+R L P R T ++ HPW+++
Sbjct: 230 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 43/270 (15%)
Query: 71 GKPY----EDVKLH---YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK 123
KP+ ++++LH + K +GRG FG + +T R +A K ++K +++ + +
Sbjct: 59 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 118
Query: 124 DDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI------------ 171
+ E ++ + Q I A++D+ +++VM+ GG+L +
Sbjct: 119 ACFREERDVLVNGDCQW-ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 177
Query: 172 -------------IAKGHYSER-AAASICSKDENALLKATDFGLSVFI-EEGKVYRDI-V 215
I + HY R D N ++ DFG + + ++G V + V
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 216 GSAYYVAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGD 269
G+ Y++PE+L+ +YG E D WS GV +Y +L G PF+AE+ + I+ +
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE 297
Query: 270 IDFESAPWPT-ISSSAKDLVRRMLTQDPKK 298
F+ T +S AKDL++R++ ++
Sbjct: 298 ERFQFPSHVTDVSEEAKDLIQRLICSRERR 327
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
D+ EF+ + + K + ++ L + F+ FD++ G+I +EL + G D+
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 466 IKEIISEVDTDNDGRINYDEFCAMM 490
I+ ++ + D +NDGRI++DEF MM
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I++ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 493 GTQPQAK 499
+ AK
Sbjct: 82 QMKEDAK 88
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 32/158 (20%)
Query: 261 IFDAILQGDIDFESAPWPTISSSAKDL--VRRMLTQDPKKRITSAQVLEHPWIKEGGEAS 318
+FDA GDI S K+L V RML Q P K A I+E E
Sbjct: 25 MFDADGGGDI------------SVKELGTVMRMLGQTPTKEELDA------IIEEVDEDG 66
Query: 319 DKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEE 378
ID ++F M + +K A+ S EE L + F D + G I EE
Sbjct: 67 SGTID------FEEFLVMMVRQ---MKEDAKGKSEEE---LAECFRIFDRNADGYIDAEE 114
Query: 379 LKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFI 416
L G +T+ E++ LM+ D + +G ID+ EF+
Sbjct: 115 LAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 44/272 (16%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR---EIQ 131
E ++ Y G LG G FG Y S A K + K ++ + + R E+
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 132 IMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI---- 185
+++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 186 ---------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
C KDEN L LK DFG +++ VY D G+ Y P
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 181
Query: 224 EVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTIS 281
E +R R +G+ +WS G++LY ++ G PF + E I++G + F +S
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVS 231
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
S + L+R L P R T ++ HPW+++
Sbjct: 232 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 43/270 (15%)
Query: 71 GKPY----EDVKLH---YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK 123
KP+ ++++LH + K +GRG FG + +T R +A K ++K +++ + +
Sbjct: 75 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 124 DDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI------------ 171
+ E ++ + Q I A++D+ +++VM+ GG+L +
Sbjct: 135 ACFREERDVLVNGDCQW-ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 193
Query: 172 -------------IAKGHYSER-AAASICSKDENALLKATDFGLSVFI-EEGKVYRDI-V 215
I + HY R D N ++ DFG + + ++G V + V
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 216 GSAYYVAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGD 269
G+ Y++PE+L+ +YG E D WS GV +Y +L G PF+AE+ + I+ +
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE 313
Query: 270 IDFESAPWPT-ISSSAKDLVRRMLTQDPKK 298
F+ T +S AKDL++R++ ++
Sbjct: 314 ERFQFPSHVTDVSEEAKDLIQRLICSRERR 343
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 64 PDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK 123
PD + K +D + +S +E+G G FG Y + A K +S +
Sbjct: 2 PDVAELFFK--DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59
Query: 124 DDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAG--GELFD---------RII 172
DI +E++ +Q L PN ++++G Y + + +VME C G +L + I
Sbjct: 60 QDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA 118
Query: 173 AKGHYSERAAASICSKD--------------ENALLKATDFGLSVFIEEGKVYRDIVGSA 218
A H + + A + S + E L+K DFG + + + VG+
Sbjct: 119 AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGTP 175
Query: 219 YYVAPEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDID-FE 273
Y++APEV+ +Y ++D+WS G+ L PP + I Q + +
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ 235
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S W S ++ V L + P+ R TS +L+H ++
Sbjct: 236 SGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 372 GTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLER---- 427
G+I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKT 93
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 487 CAMMR 491
M+
Sbjct: 154 LEFMK 158
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 93 TEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 412 YIEFI 416
Y EF+
Sbjct: 150 YDEFL 154
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRSGTQPQAK 499
++E+I EVD D G +++DEF MM + +K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 121/289 (41%), Gaps = 66/289 (22%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK---DDIKREIQIMQHLSGQPN 141
+++G G +GV Y +N+ G FA K I + K D+ REI I++ L N
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELK-HSN 61
Query: 142 IVEFKGAYEDKQSVHVVME-----------LCAGGELFDRIIAK----------GHYSER 180
IV+ K+ + +V E +C GG + + AK + +R
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR 119
Query: 181 AAASICSKDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYG 231
K +N L LK DFGL+ F + Y V + +Y AP+VL ++Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL------------------QGDIDF- 272
IDIWS G I +++G P F +E I + D +F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 273 --ESAPWPT----ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGG 315
E PW + + S DL+ +ML DP +RIT+ Q LEH + KE
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 113/266 (42%), Gaps = 44/266 (16%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR---EIQIMQHLS 137
Y G LG G FG Y S A K + K ++ + + R E+ +++ +S
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 138 -GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI---------- 185
G ++ +E S +++E +LFD I +G E A S
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 186 ---CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-- 227
C KDEN L LK DFG +++ VY D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 184
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
R +G+ +WS G++LY ++ G PF + E I++G + F +SS + L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 234
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKE 313
+R L P R T ++ HPW+++
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 411 DYIEFITATMHRHKLE----RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDT 465
D+ EF+ + + K + ++ L + F+ FD++ G+I +EL + G D+
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 466 IKEIISEVDTDNDGRINYDEFCAMM 490
I+ ++ + D +NDGRI++DEF MM
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMMRS 492
AF FD D G I++ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 493 GTQPQAK 499
+ AK
Sbjct: 82 QMKEDAK 88
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 32/158 (20%)
Query: 261 IFDAILQGDIDFESAPWPTISSSAKDL--VRRMLTQDPKKRITSAQVLEHPWIKEGGEAS 318
+FDA GDI S K+L V RML Q P K A I+E E
Sbjct: 25 MFDADGGGDI------------SVKELGTVMRMLGQTPTKEELDA------IIEEVDEDG 66
Query: 319 DKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEE 378
ID ++F M + +K A+ S EE L ++F D + G I EE
Sbjct: 67 SGTID------FEEFLVMMVRQ---MKEDAKGKSEEE---LAELFRIFDRNADGYIDAEE 114
Query: 379 LKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFI 416
L G +T+ E++ LM+ D + +G ID+ EF+
Sbjct: 115 LAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 121/289 (41%), Gaps = 66/289 (22%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK---DDIKREIQIMQHLSGQPN 141
+++G G +GV Y +N+ G FA K I + K D+ REI I++ L N
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELK-HSN 61
Query: 142 IVEFKGAYEDKQSVHVVME-----------LCAGGELFDRIIAK----------GHYSER 180
IV+ K+ + +V E +C GG + + AK + +R
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR 119
Query: 181 AAASICSKDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYG 231
K +N L LK DFGL+ F + Y V + +Y AP+VL ++Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL------------------QGDIDF- 272
IDIWS G I +++G P F +E I + D +F
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 273 --ESAPWPT----ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGG 315
E PW + + S DL+ +ML DP +RIT+ Q LEH + KE
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 81 YSFGKELGRGQFG-VTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ 139
Y G LG G +G V + + R+ K+ N + ++K+EIQ+++ L +
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 140 PNIVEFKGAY--EDKQSVHVVMELCAGG--ELFDRIIAKGHYSERAAASICS-------- 187
N+++ E+KQ +++VME C G E+ D + K +A C
Sbjct: 67 -NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL 125
Query: 188 ----------KDENALL------KATDFGLSVFIEE---GKVYRDIVGSAYYVAPEV--- 225
K N LL K + G++ + R GS + PE+
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG 185
Query: 226 LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAK 285
L G ++DIWSAGV LY + +G+ PF + +F+ I +G P +S
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS---- 241
Query: 286 DLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPI 322
DL++ ML +P KR + Q+ +H W ++ ++ P+
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 372 GTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLE----R 427
G+I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 487 CAMMR 491
M+
Sbjct: 154 LEFMK 158
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 93 SEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 412 YIEFI 416
Y EF+
Sbjct: 150 YDEFL 154
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRSGTQPQAK 499
++E+I EVD D G +++DEF MM + +K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 72 KPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR--- 128
K E ++ Y G LG G FG Y S A K + K ++ + + R
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 129 EIQIMQHLS-GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI- 185
E+ +++ +S G ++ +E S +++E +LFD I +G E A S
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 186 ------------CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYY 220
C KDEN L LK DFG +++ VY D G+ Y
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 202
Query: 221 VAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 252
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+S + L+R L P R T ++ HPW+++
Sbjct: 253 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 372 GTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLE----R 427
G+I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L F+ +DK+ G+I +DEL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 487 CAMMR 491
M+
Sbjct: 154 LEFMK 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +M+ D + G I +ELK L G +TE ++++LM+ D + +G ID
Sbjct: 93 SEEELSDLFRMW---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 412 YIEFI 416
Y EF+
Sbjct: 150 YDEFL 154
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRSGTQPQAK 499
++E+I EVD D G +++DEF MM + +K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 372 GTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLE----R 427
G+I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L F+ FDK+ G+I +DEL+I ++ G +D I+E++ + D +NDGRI+YDE+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEW 153
Query: 487 CAMMR 491
M+
Sbjct: 154 LEFMK 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +MF D + G I +ELK L G +TE ++++LM+ D + +G ID
Sbjct: 93 SEEELSDLFRMF---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 412 YIEFI 416
Y E++
Sbjct: 150 YDEWL 154
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRSGTQPQAK 499
++E+I EVD D G +++DEF MM + +K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 121/289 (41%), Gaps = 66/289 (22%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDK---DDIKREIQIMQHLSGQPN 141
+++G G +GV Y +N+ G FA K I + K D+ REI I++ L N
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELK-HSN 61
Query: 142 IVEFKGAYEDKQSVHVVME-----------LCAGGELFDRIIAK----------GHYSER 180
IV+ K+ + +V E +C GG + + AK + +R
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR 119
Query: 181 AAASICSKDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYG 231
K +N L LK DFGL+ F + Y + + +Y AP+VL ++Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL------------------QGDIDF- 272
IDIWS G I +++G P F +E I + D +F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 273 --ESAPWPT----ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGG 315
E PW + + S DL+ +ML DP +RIT+ Q LEH + KE
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 44/266 (16%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKR---EIQIMQHLS 137
Y G LG G FG Y S A K + K ++ + + R E+ +++ +S
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 138 -GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI---------- 185
G ++ +E S +++E +LFD I +G E A S
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 186 ---CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-- 227
C KDEN L LK DFG +++ VY D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 184
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
R +G+ +WS G++LY ++ G PF + E I+ G + F +SS + L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHL 234
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKE 313
+R L P R T ++ HPW+++
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 64/296 (21%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P+ + Y + +G G V + A K I+ K T D++ +EIQ
Sbjct: 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQA 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFD---RIIAKGHYS-----ERAAAS 184
M PNIV + ++ K + +VM+L +GG + D I+AKG + E A+
Sbjct: 67 MSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 185 ICS-------------------KDENALL------KATDFGLSVFIEEG------KVYRD 213
I K N LL + DFG+S F+ G KV +
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 214 IVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDID 271
VG+ ++APEV+ R Y + DIWS G+ L +G P+ + LQ D
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND-- 243
Query: 272 FESAPWPTISSSAKD-------------LVRRMLTQDPKKRITSAQVLEHPWIKEG 314
P P++ + +D ++ L +DP+KR T+A++L H + ++
Sbjct: 244 ----P-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 48/286 (16%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD---IKREIQ 131
E + Y G LG+G FG + + Q A K I + +++ + D E+
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 132 IMQHL---SGQPNIVEFKGAYEDKQSVHVVMEL-CAGGELFDRIIAKGHYSE-------- 179
++ + G P ++ +E ++ +V+E +LFD I KG E
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG 146
Query: 180 --RAAASICS---------KDENALL-------KATDFGLSVFIEEGKVYRDIVGSAYYV 221
AA C KDEN L+ K DFG + + + Y D G+ Y
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-EPYTDFDGTRVYS 205
Query: 222 APEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
PE + R + +WS G++LY ++ G PF + E IL+ ++ F +
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----H 255
Query: 280 ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
+S L+RR L P R + ++L PW++ A D P++ +
Sbjct: 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPLNPS 299
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 47/273 (17%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G FG Y T A K I + ++ + +D EI I+ PNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSERAAASICSKDENAL---------- 193
A+ + ++ +++E CAGG + D ++ + +E +C + +AL
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 194 ---------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLR------RRYG 231
+K DFG+S RD +G+ Y++APEV+ R Y
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP--WPTISSSAKDLVR 289
+ D+WS G+ L + PP + I + + + P W SS+ KD ++
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLK 275
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPI 322
+ L ++ R T++Q+L+HP++ S+KPI
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 64/296 (21%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P+ + Y + +G G V + A K I+ K T D++ +EIQ
Sbjct: 4 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQA 61
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFD---RIIAKGHYS-----ERAAAS 184
M PNIV + ++ K + +VM+L +GG + D I+AKG + E A+
Sbjct: 62 MSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 185 ICS-------------------KDENALL------KATDFGLSVFIEEG------KVYRD 213
I K N LL + DFG+S F+ G KV +
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 214 IVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDID 271
VG+ ++APEV+ R Y + DIWS G+ L +G P+ + LQ D
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND-- 238
Query: 272 FESAPWPTISSSAKD-------------LVRRMLTQDPKKRITSAQVLEHPWIKEG 314
P P++ + +D ++ L +DP+KR T+A++L H + ++
Sbjct: 239 ----P-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 47/273 (17%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G FG Y T A K I + ++ + +D EI I+ PNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSERAAASICSKDENAL---------- 193
A+ + ++ +++E CAGG + D ++ + +E +C + +AL
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 194 ---------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLR------RRYG 231
+K DFG+S RD +G+ Y++APEV+ R Y
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP--WPTISSSAKDLVR 289
+ D+WS G+ L + PP + I + + + P W SS+ KD ++
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLK 275
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPI 322
+ L ++ R T++Q+L+HP++ S+KPI
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 47/273 (17%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G FG Y T A K I + ++ + +D EI I+ PNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSERAAASICSKDENAL---------- 193
A+ + ++ +++E CAGG + D ++ + +E +C + +AL
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 194 ---------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLR------RRYG 231
+K DFG+S RD +G+ Y++APEV+ R Y
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP--WPTISSSAKDLVR 289
+ D+WS G+ L + PP + I + + + P W SS+ KD ++
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLK 275
Query: 290 RMLTQDPKKRITSAQVLEHPWIKEGGEASDKPI 322
+ L ++ R T++Q+L+HP++ S+KPI
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 44/266 (16%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD---IKREIQIMQHLS 137
Y G LG G FG Y S A K + K ++ + + + E+ +++ +S
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 138 -GQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI---------- 185
G ++ +E S +++E +LFD I +G E A S
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 186 CS---------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-- 227
C KDEN L LK DFG +++ VY D G+ Y PE +R
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 184
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
R +G+ +WS G++LY ++ G PF + E I++G + F +S + L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHL 234
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKE 313
+R L P R T ++ HPW+++
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 372 GTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLE----R 427
G+I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L F+ DK+ G+I +DEL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 94 EEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 487 CAMMR 491
M+
Sbjct: 154 LEFMK 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFI 416
L +F D + G I +ELK L G +TE ++++LM+ D + +G IDY EF+
Sbjct: 97 LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRSGTQPQAK 499
++E+I EVD D G +++DEF MM + +K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 372 GTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLE----R 427
G+I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L F+ FDK+ G+I +DEL+I ++ G +D I+E++ + D +NDGRI+YDE
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEX 153
Query: 487 CAMMR 491
M+
Sbjct: 154 LEFMK 158
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +MF D + G I +ELK L G +TE ++++LM+ D + +G ID
Sbjct: 93 SEEELSDLFRMF---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 412 YIEFI 416
Y E +
Sbjct: 150 YDEXL 154
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 466 IKEIISEVDTDNDGRINYDEFCAMMRSGTQPQAK 499
++E+I EVD D G +++DEF MM + +K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 371 SGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMH----RHKLE 426
G I+ +EL + LG T E+Q++++ D DG+GT+D+ EF+ + K +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 427 RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDE 485
++ L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDE
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 486 FCAMMR 491
F M+
Sbjct: 153 FLEFMK 158
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 93 TEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 412 YIEFI 416
Y EF+
Sbjct: 150 YDEFL 154
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 54/286 (18%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+G G +G Y TG+ A K + VT +++++IK+EI +++ S NI +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 147 GAYEDKQ------SVHVVMELCAGGELFDRII-AKGH-YSERAAASICSK---------- 188
GA+ K + +VME C G + D I KG+ E A IC +
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 189 ---------------DENALLKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLR----- 227
ENA +K DFG+S ++ R+ +G+ Y++APEV+
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 228 -RRYGKEIDIWSAGVILYILLSGVPPFW-AETEKGIFDAILQGDIDFESAPWPTISSSAK 285
Y + D+WS G+ + G PP + +F +S W S +
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQ 264
Query: 286 DLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMK 331
+ L ++ +R + Q+++HP+I+ D+P + V ++K
Sbjct: 265 SFIESCLVKNHSQRPATEQLMKHPFIR------DQPNERQVRIQLK 304
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L E+ Q + + F+ D +N G + Y ELK + LG +L + E+ L++ D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 411 DYIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIK 467
Y +F M L+RD D + +AFQ FD D++G I+I L K+ G D+ ++
Sbjct: 77 KYDDFYI-VMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Query: 468 EIISEVDTDNDGRINYDEFCAM 489
+I E D D DG IN +EF A+
Sbjct: 136 AMIEEFDLDGDGEINENEFIAI 157
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 78/307 (25%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISK--RKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
LG G +GV T TG A K I + L REI+I++H + I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKHENIITI 74
Query: 145 FK----GAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-----------RAA-----AS 184
F ++E+ V+++ EL R+I+ S+ RA ++
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 185 ICSKD---------ENALLKATDFGLSVFIEEGKV-----------YRDIVGSAYYVAPE 224
+ +D N LK DFGL+ I+E + V + +Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 225 VL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAILQGDID------- 271
V+ +Y + +D+WS G IL L P F + IF I D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 272 -------------FESAP----WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEG 314
+ +AP +P ++ DL++RML DP KRIT+ + LEHP+++
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312
Query: 315 GEASDKP 321
+ +D+P
Sbjct: 313 HDPNDEP 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 78/307 (25%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISK--RKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
LG G +GV T TG A K I + L REI+I++H + I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKHENIITI 74
Query: 145 FK----GAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-----------RAA-----AS 184
F ++E+ V+++ EL R+I+ S+ RA ++
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 185 ICSKD---------ENALLKATDFGLSVFIEEGKV-----------YRDIVGSAYYVAPE 224
+ +D N LK DFGL+ I+E + V + +Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 225 VL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAILQGDID------- 271
V+ +Y + +D+WS G IL L P F + IF I D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 272 -------------FESAP----WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEG 314
+ +AP +P ++ DL++RML DP KRIT+ + LEHP+++
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312
Query: 315 GEASDKP 321
+ +D+P
Sbjct: 313 HDPNDEP 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 78/307 (25%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISK--RKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
LG G +GV T TG A K I + L REI+I++H + I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKHENIITI 74
Query: 145 FK----GAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-----------RAA-----AS 184
F ++E+ V+++ EL R+I+ S+ RA ++
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 185 ICSKD---------ENALLKATDFGLSVFIEEGKV-----------YRDIVGSAYYVAPE 224
+ +D N LK DFGL+ I+E + V + +Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 225 VL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAILQGDID------- 271
V+ +Y + +D+WS G IL L P F + IF I D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 272 -------------FESAP----WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEG 314
+ +AP +P ++ DL++RML DP KRIT+ + LEHP+++
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312
Query: 315 GEASDKP 321
+ +D+P
Sbjct: 313 HDPNDEP 319
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ E+ Q +++ F D D +GTI +ELK + LG + + E+++++ D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 412 YIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKE 468
+ +F+T M + E+D + + KAF+ FD D +G I+ L+ K+ G D+ ++E
Sbjct: 61 FGDFLTV-MTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 119
Query: 469 IISEVDTDNDGRINYDEFCAMMR 491
+I E D D DG ++ EF +M+
Sbjct: 120 MIDEADRDGDGEVSEQEFLRIMK 142
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
+ NL+ E+I K+ F D DN+G+I+ EL + LG +EAEV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 408 GTIDYIEFITATMHRHKLERDD--HLYKAFQHFDKDNSGFITIDELEIAMKDYG 459
I++ EF+ A M R D L +AF+ FDK+ G I+ EL+ + G
Sbjct: 61 HQIEFSEFL-ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCAMM 490
+AF FDKDN+G I+ EL M+ G+ + + ++++E+D D + +I + EF A+M
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQ 396
S + Q L + F D + G I+ ELK L +G KLT+AE++
Sbjct: 78 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 50/287 (17%)
Query: 47 PTPAAAPVSGLKQAVPRPDT--NTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTG 104
P P P L RPD NT+ ++ K++GRGQF Y G
Sbjct: 12 PVPQFQPQKAL-----RPDMGYNTLA---------NFRIEKKIGRGQFSEVYRAACLLDG 57
Query: 105 RQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAG 164
A K + L+ + D +EI +++ L+ PN++++ ++ + +++V+EL
Sbjct: 58 VPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADA 116
Query: 165 GELFDRII-----AKGHYSERAA----ASICS---------------KDENALLKAT--- 197
G+L R+I K ER +CS K N + AT
Sbjct: 117 GDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVV 175
Query: 198 ---DFGLSVFI-EEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPP 252
D GL F + +VG+ YY++PE + Y + DIWS G +LY + + P
Sbjct: 176 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
Query: 253 FWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKR 299
F+ + D+ P S + LV + DP+KR
Sbjct: 236 FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
+ +EI+ L + F +D DNSG+++ EE + L VQ++++ D DGNG +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEV 56
Query: 411 DYIEFITA-TMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDY-GMGDDDT--- 465
D+ EFI + K +++ L AF+ +D D G+I+ EL +K G DT
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 466 --IKEIISEVDTDNDGRINYDEFCAMM 490
+ + I D D DGRI+++EFCA++
Sbjct: 117 QIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 97
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V L G +L+ +++ H S
Sbjct: 98 FRHENIIGINDIIR-APTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 275 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 335 QYYDPSDEPIAEA 347
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 354 EEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYI 413
+EI+ L + F +D DNSG+++ EE + L VQ++++ D DGNG +D+
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 414 EFITA-TMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDY-GMGDDDT-----I 466
EFI + K +++ L AF+ +D D G+I+ EL +K G DT +
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 467 KEIISEVDTDNDGRINYDEFCAMM 490
+ I D D DGRI+++EFCA++
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 350 NLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGT 409
+L EEI+ L++ F D D G I +L + +G TE E+ +L + +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 410 IDYIEFITATMHRHKLERDD-----HLYKAFQHFDKDNSGFITIDELEIAMKD---YGMG 461
+D+ +F+ + E D L AF+ FD + G I+ EL AM+ + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 123
Query: 462 DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
D I+EII +VD + DGR++++EF MM
Sbjct: 124 HRD-IEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 345 KVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAAD 403
K++AE ++ L+ F DT+ G I+ EL+ + + LG ++ ++++++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 404 VDGNGTIDYIEFI 416
++G+G +D+ EF+
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 350 NLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGT 409
+L EEI+ L++ F D D G I +L + +G TE E+ +L + +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 410 IDYIEFITATMHRHKLERDD-----HLYKAFQHFDKDNSGFITIDELEIAMK---DYGMG 461
+D+ +F+ + E D L AF+ FD + G I+ EL AM+ + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG 123
Query: 462 DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
D I+EII +VD + DGR++++EF MM
Sbjct: 124 HRD-IEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 345 KVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGL-ARLGSKLTEAEVQQLMEAAD 403
K++AE ++ L+ F DT+ G I+ EL+ + A LG ++ ++++++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 404 VDGNGTIDYIEFI 416
++G+G +D+ EF+
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G +G+ Y + S + A K I +R + EI + +HL + NIV++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHK-NIVQYL 85
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAK-----------GHYSERAAASICSKDEN---- 191
G++ + + + ME GG L + +K G Y+++ + +N
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 192 --------------ALLKATDFGLSVFIEE-GKVYRDIVGSAYYVAPEVLR---RRYGKE 233
+LK +DFG S + G+ Y+APE++ R YGK
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 234 IDIWSAGVILYILLSGVPPFW--AETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
DIWS G + + +G PPF+ E + +F G ++S+ AK + +
Sbjct: 206 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFILKC 262
Query: 292 LTQDPKKRITSAQVLEHPWIK 312
DP KR + +L ++K
Sbjct: 263 FEPDPDKRACANDLLVDEFLK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 42/261 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G +G+ Y + S + A K I +R + EI + +HL NIV++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLK-HKNIVQYL 71
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAK-----------GHYSERAAASICSKDEN---- 191
G++ + + + ME GG L + +K G Y+++ + +N
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 192 --------------ALLKATDFGLSVFIEE-GKVYRDIVGSAYYVAPEVLR---RRYGKE 233
+LK +DFG S + G+ Y+APE++ R YGK
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 234 IDIWSAGVILYILLSGVPPFW--AETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
DIWS G + + +G PPF+ E + +F G ++S+ AK + +
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFILKC 248
Query: 292 LTQDPKKRITSAQVLEHPWIK 312
DP KR + +L ++K
Sbjct: 249 FEPDPDKRACANDLLVDEFLK 269
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 77
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNX 254
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 315 QYYDPSDEPIAEA 327
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 48/270 (17%)
Query: 90 GQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAY 149
G FG Y T A K I + ++ + +D EI I+ PNIV+ A+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKLLDAF 76
Query: 150 EDKQSVHVVMELCAGGELFDRIIAKGH--YSERAAASICSKDENAL-------------- 193
+ ++ +++E CAGG + D ++ + +E +C + +AL
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 194 -----------LKATDFGLSVFIEEGKVYR--DIVGSAYYVAPEVLR------RRYGKEI 234
+K DFG+S + R +G+ Y++APEV+ R Y +
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 235 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP--WPTISSSAKDLVRRML 292
D+WS G+ L + PP + I + + + P W SS+ KD +++ L
Sbjct: 196 DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCL 252
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPI 322
++ R T++Q+L+HP++ S+KPI
Sbjct: 253 EKNVDARWTTSQLLQHPFVTVD---SNKPI 279
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 77
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNX 254
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 315 QYYDPSDEPIAEA 327
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 44/262 (16%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G FG Y TG A K I + ++ + +D EI+I+ P IV+
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA-TCDHPYIVKL 73
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSERAAASICSKDENAL---------- 193
GAY + +++E C GG + D I+ + +E +C + AL
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 194 ---------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR------YG 231
++ DFG+S + RD +G+ Y++APEV+ Y
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP--WPTISSSAKDLVR 289
+ DIWS G+ L + PP + I + D P W S +D ++
Sbjct: 193 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---SVEFRDFLK 249
Query: 290 RMLTQDPKKRITSAQVLEHPWI 311
L ++P+ R ++AQ+LEHP++
Sbjct: 250 IALDKNPETRPSAAQLLEHPFV 271
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQR--TLREIKILLR 81
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 82 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 319 QYYDPSDEPIAEA 331
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 44/262 (16%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G FG Y TG A K I + ++ + +D EI+I+ P IV+
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA-TCDHPYIVKL 81
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAKGH--YSERAAASICSKDENAL---------- 193
GAY + +++E C GG + D I+ + +E +C + AL
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 194 ---------------LKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR------YG 231
++ DFG+S + RD +G+ Y++APEV+ Y
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAP--WPTISSSAKDLVR 289
+ DIWS G+ L + PP + I + D P W S +D ++
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---SVEFRDFLK 257
Query: 290 RMLTQDPKKRITSAQVLEHPWI 311
L ++P+ R ++AQ+LEHP++
Sbjct: 258 IALDKNPETRPSAAQLLEHPFV 279
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 77
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 315 QYYDPSDEPIAEA 327
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 85
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 86 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 142
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 262
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 263 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 323 QYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 77
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 315 QYYDPSDEPIAEA 327
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 77
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 315 QYYDPSDEPIAEA 327
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 168 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 228 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 287
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 288 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 79
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 80 FRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 257 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 317 QYYDPSDEPIAEA 329
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 221 SNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 280
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 221 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 280
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 228 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 287
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 288 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 229 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 288
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 289 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 220 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 279
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 280 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 97
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 98 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP+++
Sbjct: 275 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 335 QYYDPSDEPIAEA 347
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLA 79
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 80 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP++
Sbjct: 257 GINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLA 316
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 317 QYYDPSDEPIAEA 329
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 194 LKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
LK DFGL+ + + V + +Y APE++ + Y K IDIWS G IL +L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 248 SGVPPFWAETEKGIFDAIL-------QGDIDF----------------ESAPW----PTI 280
S P F + + IL Q D++ PW P
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 281 SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSA 325
S A DL+ +MLT +P KRI Q L HP++++ + SD+PI A
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 68/313 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM-- 133
DV Y+ +G G +G+ +N + A K IS + T + REI+I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLA 79
Query: 134 ---QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--------- 181
+++ G +I+ E + V++V +L +L+ +++ H S
Sbjct: 80 FRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 182 -------AASICSKD---ENALLKAT------DFGLSVFIEEGK----VYRDIVGSAYYV 221
+A++ +D N LL T DFGL+ + + V + +Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 222 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------QGDIDF 272
APE++ + Y K IDIWS G IL +LS P F + + IL Q D++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 273 ----------------ESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
PW P S A DL+ +MLT +P KRI Q L HP++
Sbjct: 257 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLA 316
Query: 313 EGGEASDKPIDSA 325
+ + SD+PI A
Sbjct: 317 QYYDPSDEPIAEA 329
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 13/152 (8%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+ + +EI+ L + F +D DNSG+++ EE + L VQ++++ D DG
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 66
Query: 407 NGTIDYIEFITA-TMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGD--- 462
NG +D+ EFI + K +++ L AF+ +D D G+I+ EL +K +G+
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLK 125
Query: 463 DDTIKEIISEV----DTDNDGRINYDEFCAMM 490
D +++I+ + D D DGRI+++EFCA++
Sbjct: 126 DTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 13/152 (8%)
Query: 347 IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDG 406
+ + +EI+ L + F +D DNSG+++ EE + L VQ++++ D DG
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 65
Query: 407 NGTIDYIEFITA-TMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGD--- 462
NG +D+ EFI + K +++ L AF+ +D D G+I+ EL +K +G+
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLK 124
Query: 463 DDTIKEIISEV----DTDNDGRINYDEFCAMM 490
D +++I+ + D D DGRI+++EFCA++
Sbjct: 125 DTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L E+ Q + + F+ D +N G + Y ELK LG +L + E+ L++ D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 411 DYIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIK 467
Y +F + L+RD D + +AFQ FD D++G I+I L K+ G D+ ++
Sbjct: 77 KYDDFYIVXGEK-ILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Query: 468 EIISEVDTDNDGRINYDEFCAM 489
I E D D DG IN +EF A+
Sbjct: 136 AXIEEFDLDGDGEINENEFIAI 157
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 142/344 (41%), Gaps = 88/344 (25%)
Query: 48 TPAAAPVSGLKQAVPRPDTNTIL------GKPYEDVKLHYSFGKELGRGQFGVTYLCTEN 101
T + AP++G+K P D N ++ GK E ++ Y+ K +G G FGV +
Sbjct: 4 TMSNAPLNGVKLN-PLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVF----- 57
Query: 102 STGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAY------EDKQSV 155
+ ++ +K++ DK RE+QIM+ + PN+V+ K + +D+ +
Sbjct: 58 -QAKLVESDEVAIKKVL--QDKRFKNRELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 156 HVVMELCAGGELFDRIIAKGHYSE------------------RAAA-----SICSKD--- 189
++V+E E R A HY++ R+ A IC +D
Sbjct: 114 NLVLEYVP--ETVYR--ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKP 169
Query: 190 -------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAG 240
+ +LK DFG + + G+ + S YY APE++ Y IDIWS G
Sbjct: 170 QNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTG 229
Query: 241 VILYILLSGVPPFWAETEKGIFDAILQ------------GDIDFESAPWPTI-------- 280
++ L+ G P F E+ I++ + ++ +P I
Sbjct: 230 CVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKV 289
Query: 281 -----SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE--GGEA 317
A DL+ R+L P R+T+ + L HP+ E GEA
Sbjct: 290 FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEA 333
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 68/329 (20%)
Query: 56 GLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKR 115
G+ VP + + G+P+ DV Y+ + +G G +G+ ++ + A K IS
Sbjct: 22 GVGPGVPG-EVEMVKGQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPF 79
Query: 116 KLVTKNDKDDIKREIQIMQHLSGQPNIVEFK-----GAYEDKQSVHVVMELCAGGELF-- 168
+ T + REIQI+ + N++ + E + V++V +L +L+
Sbjct: 80 EHQTYCQR--TLREIQILLRFRHE-NVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKL 135
Query: 169 --------DRIIAKGHYSERAAASICS--------KDENAL------LKATDFGLSVFIE 206
D I + R I S K N L LK DFGL+ +
Sbjct: 136 LKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIAD 195
Query: 207 ----EGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG 260
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 196 PEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
Query: 261 IFDAIL-------QGDID----------FESAP----------WPTISSSAKDLVRRMLT 293
+ IL Q D++ +S P +P S A DL+ RMLT
Sbjct: 256 QLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLT 315
Query: 294 QDPKKRITSAQVLEHPWIKEGGEASDKPI 322
+P KRIT + L HP++++ + +D+P+
Sbjct: 316 FNPNKRITVEEALAHPYLEQYYDPTDEPV 344
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 339 LKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQL 398
++KL + ++ S IQGL + F +D D S ++ +E + GLA+LG L +AE + +
Sbjct: 21 MEKLRAQCLSRGASG--IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGV 78
Query: 399 MEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIA---- 454
D +G+GT+D EF+ A R+ + AF D+ G +T+D+L
Sbjct: 79 CRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGR 138
Query: 455 ----MKDYGMGDDDTIKEIISEVD-TDNDGRINYDEF 486
++ +D+ ++ + D ++ DG++ EF
Sbjct: 139 AHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEF 175
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 350 NLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGT 409
+L EEI+ L++ F D D G I +L + +G TE E+ +L + +++ G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 410 IDYIEFITATMHRHKLERDD-----HLYKAFQHFDKDNSGFITIDELEIAMKD---YGMG 461
+D+ +F+ + E D L AF+ FD + G I+ EL AM+ + +G
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 462 DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
D I+EII +VD + DGR++++EF MM
Sbjct: 138 HRD-IEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 345 KVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAAD 403
K++AE ++ L+ F DT+ G I+ EL+ + + LG ++ ++++++ D
Sbjct: 90 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 149
Query: 404 VDGNGTIDYIEFI 416
++G+G +D+ EF+
Sbjct: 150 LNGDGRVDFEEFV 162
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 84/336 (25%)
Query: 46 GPTPAAAPVSGLKQAVPRPDTNTILGKPYEDVKLH---------YSFGKELGRGQFGVTY 96
GP P+ A V D NT + Y D H Y ++LGRG++ +
Sbjct: 3 GPVPSRARVYT--------DVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVF 54
Query: 97 LCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYED--KQS 154
+ + K + K K+ IKREI+I+++L G PNI+ +D ++
Sbjct: 55 EAINITNNEKVVVKILKPVK------KNKIKREIKILENLRGGPNIITLADIVKDPVSRT 108
Query: 155 VHVVMELCAGGE-------LFDRIIAKGHYSERAAASICS---------KDENAL----- 193
+V E + L D I Y A C K N +
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 194 --LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSG 249
L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 250 VPPFWAETE--------------KGIFDAILQGDIDFE--------------------SA 275
PF+ + + ++D I + +I+ + S
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 276 PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+S A D + ++L D + R+T+ + +EHP+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 119/304 (39%), Gaps = 79/304 (25%)
Query: 88 GRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS--GQPNIVEF 145
G+G FG L E STG A K + + D RE+QIMQ L+ PNIV+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQ-------DPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 146 KGAY-----EDKQSVH--VVMEL-------CAGGE---------------LFDRIIAKGH 176
+ + D++ ++ VVME C LF I + G
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 177 YSERAAASICSKD---ENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL 226
+ ++C +D N L LK DFG + + + + S YY APE++
Sbjct: 145 L-HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELI 203
Query: 227 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ----------------- 267
+ Y +DIWS G I ++ G P F + G I++
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263
Query: 268 GDIDFESA---PWPTISS--------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGE 316
D+D ++ PW + S A DL+ +L P++R+ + L HP+ E +
Sbjct: 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323
Query: 317 ASDK 320
+ K
Sbjct: 324 PATK 327
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 40/206 (19%)
Query: 137 SGQPNIVEFKGAYEDKQSVHVVMELCAG-GELFDRIIAKGHYSERAAASI---------- 185
SG ++ +E S +++E +LFD I +G E A S
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 186 ---CS------KDENAL-------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-- 227
C KDEN L LK DFG +++ VY D G+ Y PE +R
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 231
Query: 228 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL 287
R +G+ +WS G++LY ++ G PF + E I++G + F +SS + L
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHL 281
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKE 313
+R L P R T ++ HPW+++
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 34/246 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LGRG FG + C +TG+ +ACK ++K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHVVMELCAGGELFDRII-----AKGHYSERA---AASICS----------- 187
A+E K + +VM + GG++ I G RA A I S
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 188 ----KDENALL------KATDFGLSVFIEEGKV-YRDIVGSAYYVAPEVLR-RRYGKEID 235
K EN LL + +D GL+V ++ G+ + G+ ++APE+L Y +D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP-TISSSAKDLVRRMLTQ 294
++ GV LY +++ PF A EK + + L+ + ++ +P S ++KD +L +
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 295 DPKKRI 300
DP+KR+
Sbjct: 431 DPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 34/246 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LGRG FG + C +TG+ +ACK ++K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHVVMELCAGGELFDRII-----AKGHYSERA---AASICS----------- 187
A+E K + +VM + GG++ I G RA A I S
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 188 ----KDENALL------KATDFGLSVFIEEGKV-YRDIVGSAYYVAPEVLR-RRYGKEID 235
K EN LL + +D GL+V ++ G+ + G+ ++APE+L Y +D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP-TISSSAKDLVRRMLTQ 294
++ GV LY +++ PF A EK + + L+ + ++ +P S ++KD +L +
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 295 DPKKRI 300
DP+KR+
Sbjct: 431 DPEKRL 436
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 34/246 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LGRG FG + C +TG+ +ACK ++K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHVVMELCAGGELFDRII-----AKGHYSERA---AASICS----------- 187
A+E K + +VM + GG++ I G RA A I S
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 188 ----KDENALL------KATDFGLSVFIEEGKV-YRDIVGSAYYVAPEVLR-RRYGKEID 235
K EN LL + +D GL+V ++ G+ + G+ ++APE+L Y +D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP-TISSSAKDLVRRMLTQ 294
++ GV LY +++ PF A EK + + L+ + ++ +P S ++KD +L +
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 295 DPKKRI 300
DP+KR+
Sbjct: 431 DPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 34/246 (13%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LGRG FG + C +TG+ +ACK ++K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHVVMELCAGGELFDRII-----AKGHYSERA---AASICS----------- 187
A+E K + +VM + GG++ I G RA A I S
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 188 ----KDENALL------KATDFGLSVFIEEGKV-YRDIVGSAYYVAPEVLR-RRYGKEID 235
K EN LL + +D GL+V ++ G+ + G+ ++APE+L Y +D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP-TISSSAKDLVRRMLTQ 294
++ GV LY +++ PF A EK + + L+ + ++ +P S ++KD +L +
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 295 DPKKRI 300
DP+KR+
Sbjct: 431 DPEKRL 436
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 46/283 (16%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G+G FG + +N T + A K I + + + ++EI ++ P + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDS-PYVTK 84
Query: 145 FKGAYEDKQSVHVVMELCAGGELFD----------------RIIAKG----------HYS 178
+ G+Y + ++ME GG D R I KG H
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 179 ERAAASICSKDENALLKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEIDI 236
+AA + S E+ +K DFG++ + + ++ R+ VG+ +++APEV+++ Y + DI
Sbjct: 145 IKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 237 WSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI----SSSAKDLVRRML 292
WS G+ L G PP + I + + PT+ S K+ V L
Sbjct: 203 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYSKPLKEFVEACL 255
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRA 335
++P R T+ ++L+H +I + + + ++ R K+++A
Sbjct: 256 NKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 296
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK-LERDDHLYKAFQ 436
GTID+ EF+T + K + ++ + +AF+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 489 MM 490
MM
Sbjct: 71 MM 72
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 46/283 (16%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G+G FG + +N T + A K I + + + ++EI ++ P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDS-PYVTK 69
Query: 145 FKGAYEDKQSVHVVMELCAGGELFD----------------RIIAKG----------HYS 178
+ G+Y + ++ME GG D R I KG H
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 179 ERAAASICSKDENALLKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEIDI 236
+AA + S E+ +K DFG++ + + ++ R+ VG+ +++APEV+++ Y + DI
Sbjct: 130 IKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 237 WSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI----SSSAKDLVRRML 292
WS G+ L G PP + I + + PT+ S K+ V L
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYSKPLKEFVEACL 240
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRA 335
++P R T+ ++L+H +I + + + ++ R K+++A
Sbjct: 241 NKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 46/283 (16%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G+G FG + +N T + A K I + + + ++EI ++ P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDS-PYVTK 69
Query: 145 FKGAYEDKQSVHVVMELCAGGELFD----------------RIIAKG----------HYS 178
+ G+Y + ++ME GG D R I KG H
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 179 ERAAASICSKDENALLKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEIDI 236
+AA + S E+ +K DFG++ + + ++ R+ VG+ +++APEV+++ Y + DI
Sbjct: 130 IKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 237 WSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI----SSSAKDLVRRML 292
WS G+ L G PP + I + + PT+ S K+ V L
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYSKPLKEFVEACL 240
Query: 293 TQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRA 335
++P R T+ ++L+H +I + + + ++ R K+++A
Sbjct: 241 NKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 281
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK 424
GTID+ EF+T + K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 489 MM 490
MM
Sbjct: 71 MM 72
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 67/291 (23%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----REIQIMQHLSGQPNI 142
+G G +G+ C TGR A K K + +D +K REI++++ L + N+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK-----KFLESDDDKMVKKIAMREIKLLKQLRHE-NL 86
Query: 143 VEFKGAYEDKQSVHVVMELCAGG-----ELFD-----RIIAKGHYSERAAASICS----- 187
V + K+ ++V E ELF +++ K + C
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 188 ----KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEI 234
K EN L+ K DFG + G+VY D V + +Y APE+L +YGK +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 235 DIWSAGVILYILLSGVPPFWAETE------------------------KGIFDAILQGDI 270
D+W+ G ++ + G P F +++ +F + +I
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEI 266
Query: 271 DFESAP----WPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEA 317
E P +P +S DL ++ L DP KR A++L H + + G A
Sbjct: 267 K-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 44/259 (16%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G+G FG + +N T + A K I + + + ++EI ++ P + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDS-PYVTK 89
Query: 145 FKGAYEDKQSVHVVMELCAGGELFD----------------RIIAKG----------HYS 178
+ G+Y + ++ME GG D R I KG H
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 179 ERAAASICSKDENALLKATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEIDI 236
+AA + S E+ +K DFG++ + + ++ R+ VG+ +++APEV+++ Y + DI
Sbjct: 150 IKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 237 WSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI----SSSAKDLVRRML 292
WS G+ L G PP + I + + PT+ S K+ V L
Sbjct: 208 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYSKPLKEFVEACL 260
Query: 293 TQDPKKRITSAQVLEHPWI 311
++P R T+ ++L+H +I
Sbjct: 261 NKEPSFRPTAKELLKHKFI 279
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK 424
GTID+ EF+T + K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 489 MM 490
MM
Sbjct: 71 MM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK 424
GTID+ EF+T + K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 489 MM 490
MM
Sbjct: 71 MM 72
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 42/256 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+G+G FG Y +N T A K I + + + ++EI ++ P I +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI--QQEITVLSQCDS-PYITRYF 83
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS------------------- 187
G+Y + ++ME GG D ++ G E A+I
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 188 KDENALL------KATDFGLSVFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEIDIWSA 239
K N LL K DFG++ + + ++ R+ VG+ +++APEV+++ Y + DIWS
Sbjct: 143 KAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202
Query: 240 GVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTI----SSSAKDLVRRMLTQD 295
G+ L G PP + I + ++P PT+ S K+ V L +D
Sbjct: 203 GITAIELAKGEPPNSDLHPMRVLFLIPK------NSP-PTLEGQHSKPFKEFVEACLNKD 255
Query: 296 PKKRITSAQVLEHPWI 311
P+ R T+ ++L+H +I
Sbjct: 256 PRFRPTAKELLKHKFI 271
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 68/311 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
DV Y + +G G +GV TG+Q A K I V N K + RE++I++H
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKH 109
Query: 136 LSGQPNIVEFKG------AYEDKQSVHVVMELCAGG----------------ELFDRIIA 173
NI+ K Y + +SV+VV++L F +
Sbjct: 110 FKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 174 KGHYSERAAASICSKD---------ENALLKATDFGLSVFI-----EEGKVYRDIVGSAY 219
+G +A + +D EN LK DFG++ + E + V + +
Sbjct: 169 RG-LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 220 YVAPEVL--RRRYGKEIDIWSAGVI---------------------LYILLSGVPPFWAE 256
Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 257 TEKGI--FDAILQGDIDFESAPWPTI----SSSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
G A +Q + PW T+ A L+ RML +P RI++A L HP+
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347
Query: 311 IKEGGEASDKP 321
+ + + D+P
Sbjct: 348 LAKYHDPDDEP 358
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 68/311 (21%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
DV Y + +G G +GV TG+Q A K I V N K + RE++I++H
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKH 110
Query: 136 LSGQPNIVEFKG------AYEDKQSVHVVMELCAGG----------------ELFDRIIA 173
NI+ K Y + +SV+VV++L F +
Sbjct: 111 FKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 174 KGHYSERAAASICSKD---------ENALLKATDFGLSVFI-----EEGKVYRDIVGSAY 219
+G +A + +D EN LK DFG++ + E + V + +
Sbjct: 170 RG-LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 220 YVAPEVL--RRRYGKEIDIWSAGVI---------------------LYILLSGVPPFWAE 256
Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 257 TEKGI--FDAILQGDIDFESAPWPTISSSAK----DLVRRMLTQDPKKRITSAQVLEHPW 310
G A +Q + PW T+ A L+ RML +P RI++A L HP+
Sbjct: 289 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 348
Query: 311 IKEGGEASDKP 321
+ + + D+P
Sbjct: 349 LAKYHDPDDEP 359
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 119/278 (42%), Gaps = 61/278 (21%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND-KDDIKR----EIQIMQHLSGQPN 141
LG GQF Y + +T + A K I KL +++ KD I R EI+++Q LS PN
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELS-HPN 73
Query: 142 IVEFKGAYEDKQSVHVVMELCAGG-ELFDR----IIAKGHYSERAAASI----------- 185
I+ A+ K ++ +V + E+ + ++ H ++
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133
Query: 186 ---------CSKDENALLKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKE 233
DEN +LK DFGL+ F + Y V + +Y APE+L R YG
Sbjct: 134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVG 193
Query: 234 IDIWSAGVILYILLSGVPPFWAETE----KGIFDAI-------------LQGDIDFES-- 274
+D+W+ G IL LL VP +++ IF+ + L + F+S
Sbjct: 194 VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253
Query: 275 -APWPTISSSAK----DLVRRMLTQDPKKRITSAQVLE 307
P I S+A DL++ + +P RIT+ Q L+
Sbjct: 254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNI 142
G+++GRG FG + + A KS R+ + + K +E +I++ S PNI
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNI 174
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG-------------------HYSER--- 180
V G KQ +++VMEL GG+ + +G Y E
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 181 ----AAASICSKDENALLKATDFGLS------VFIEEGKVYRDIVGSAYYVAPEVLRR-R 229
AA C E +LK +DFG+S V+ G + + V + APE L R
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK---WTAPEALNYGR 291
Query: 230 YGKEIDIWSAGVILYILLS-GVPPF 253
Y E D+WS G++L+ S G P+
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPY 316
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 120/334 (35%), Gaps = 95/334 (28%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K+LG+G +G+ + + TG A K I D REI I+ LSG
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTELSGHE 69
Query: 141 NIVEFKGAY--EDKQSVHVV---MELCAGGELFDRIIAKGH--YSERAAASICS------ 187
NIV ++ + V++V ME + I+ H Y +
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 188 ------KDENALL------KATDFGLSV----------------------FIEEGKVYRD 213
K N LL K DFGLS F ++ + D
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 214 IVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDID 271
V + +Y APE+L +Y K ID+WS G IL +L G P F + + I+ G ID
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVID 248
Query: 272 FES----------------------------------APWPTI----------SSSAKDL 287
F S W + + A DL
Sbjct: 249 FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDL 308
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKP 321
+ ++L +P KRI++ L+HP++ +++P
Sbjct: 309 LDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFIT 417
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 489 MM 490
MM
Sbjct: 71 MM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 408 GTIDYIEFIT 417
GTID+ EF+T
Sbjct: 62 GTIDFPEFLT 71
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 489 MM 490
MM
Sbjct: 72 MM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFIT 417
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCAMM 490
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 4/144 (2%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+ Q +++ F D D +GTI +ELK LG + + E+++ + D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 411 DYIEFITATMHRHKLERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIK 467
++ +F+T + E+D + + KAF+ FD D +G I+ L+ K+ G D+ ++
Sbjct: 85 NFGDFLTVXTQKXS-EKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143
Query: 468 EIISEVDTDNDGRINYDEFCAMMR 491
E I E D D DG ++ EF + +
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRIXK 167
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 408 GTIDYIEFITATMHRHK 424
GTID+ EF+T + K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D DG I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 489 MM 490
MM
Sbjct: 71 MM 72
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 39/255 (15%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+G G+FG + G++ +C +I K T+ + + E IM PNI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 80
Query: 146 KGAYEDKQSVHVVMELCAGGEL--FDRI-----------------------IAKGHYSER 180
+G + V ++ E G L F R+ +A+ Y R
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 181 -AAASICSKDENALLKATDFGLSVFIEEGK---VYRDIVGSAY---YVAPEVLR-RRYGK 232
AA + N + K +DFGLS F+EE Y +G + APE + R++
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTS 200
Query: 233 EIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
D WS G++++ ++S G P+W + + + +AI Q D+ P P +S L+
Sbjct: 201 ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSLHQLMLDC 257
Query: 292 LTQDPKKRITSAQVL 306
+D R QV+
Sbjct: 258 WQKDRNARPRFPQVV 272
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 132/339 (38%), Gaps = 85/339 (25%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----R 128
P+ D Y ++G+G FG + TG++ A K K++ +N+K+ R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 66
Query: 129 EIQIMQHLSGQP--NIVEF----KGAYED-KQSVHVVMELC----AGGELFDRIIAKGHY 177
EI+I+Q L + N++E Y K S+++V + C AG L ++ K
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTL 124
Query: 178 SE-------------------------RAAASICSKDENALLKATDFGLSVFIEEGK--- 209
SE +AA + ++D +LK DFGL+ K
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLAKNSQ 182
Query: 210 --VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 265
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+ I
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 266 LQGDIDFESAPWPTISS----------------------------SAKDLVRRMLTQDPK 297
Q WP + + A DL+ ++L DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 298 KRITSAQVLEHPWIKEGGEASD-KPIDSAVLSRMKQFRA 335
+RI S L H + SD K + S L+ M ++ A
Sbjct: 303 QRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLA 341
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 113/293 (38%), Gaps = 69/293 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD------IKREIQIMQ 134
Y +++G G +GV Y ++S GR A K I + D +D REI +++
Sbjct: 23 YQKLEKVGEGTYGVVY-KAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLK 74
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELC------------AGGE-------LFDRIIAKG 175
L PNIV ++ + +V E G + L+ +
Sbjct: 75 ELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 176 HYSERAAASICSKDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL-- 226
H + K +N L LK DFGL+ F + Y V + +Y AP+VL
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 227 RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ--GDID------------- 271
++Y +DIWS G I +++G P F T+ I G +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 272 -------FESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
FE PW P DL+ ML DP KRI++ + HP+ K+
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 40/205 (19%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNI 142
G+++GRG FG + + A KS R+ + + K +E +I++ S PNI
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNI 174
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG-------------------HYSER--- 180
V G KQ +++VMEL GG+ + +G Y E
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 181 ----AAASICSKDENALLKATDFGLS------VFIEEGKVYRDIVGSAYYVAPEVLRR-R 229
AA C E +LK +DFG+S V G + + V + APE L R
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK---WTAPEALNYGR 291
Query: 230 YGKEIDIWSAGVILYILLS-GVPPF 253
Y E D+WS G++L+ S G P+
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPY 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 132/339 (38%), Gaps = 85/339 (25%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----R 128
P+ D Y ++G+G FG + TG++ A K K++ +N+K+ R
Sbjct: 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 65
Query: 129 EIQIMQHLSGQP--NIVEF----KGAYED-KQSVHVVMELC----AGGELFDRIIAKGHY 177
EI+I+Q L + N++E Y K S+++V + C AG L ++ K
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTL 123
Query: 178 SE-------------------------RAAASICSKDENALLKATDFGLSVFIEEGK--- 209
SE +AA + ++D +LK DFGL+ K
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLAKNSQ 181
Query: 210 --VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 265
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+ I
Sbjct: 182 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
Query: 266 LQGDIDFESAPWPTISS----------------------------SAKDLVRRMLTQDPK 297
Q WP + + A DL+ ++L DP
Sbjct: 242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 301
Query: 298 KRITSAQVLEHPWIKEGGEASD-KPIDSAVLSRMKQFRA 335
+RI S L H + SD K + S L+ M ++ A
Sbjct: 302 QRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLA 340
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 113/293 (38%), Gaps = 69/293 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD------IKREIQIMQ 134
Y +++G G +GV Y ++S GR A K I + D +D REI +++
Sbjct: 23 YQKLEKVGEGTYGVVY-KAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLK 74
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELC------------AGGE-------LFDRIIAKG 175
L PNIV ++ + +V E G + L+ +
Sbjct: 75 ELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 176 HYSERAAASICSKDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL-- 226
H + K +N L LK DFGL+ F + Y V + +Y AP+VL
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 227 RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ--GDID------------- 271
++Y +DIWS G I +++G P F T+ I G +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 272 -------FESAPW----PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
FE PW P DL+ ML DP KRI++ + HP+ K+
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 41/263 (15%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 70 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 128
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGDIDFESAPWPTISSSA-----KDLVR 289
S G+ L + G +PP A+ + AI + + P P + S +D V
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 247
Query: 290 RMLTQDPKKRITSAQVLEHPWIK 312
+ L ++P +R Q++ H +IK
Sbjct: 248 KCLIKNPAERADLKQLMVHAFIK 270
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 47/261 (18%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 72
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 73 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 131
Query: 187 --SKDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDI 236
K N L +K DFG+S I+E + + VG+ Y++PE L+ Y + DI
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDE--MANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 237 WSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSA-----KDLVRRM 291
WS G+ L + G P + D I+ + P P + S+ +D V +
Sbjct: 190 WSMGLSLVEMAVGRYPRPPMAIFELLDYIV-------NEPPPKLPSAVFSLEFQDFVNKC 242
Query: 292 LTQDPKKRITSAQVLEHPWIK 312
L ++P +R Q++ H +IK
Sbjct: 243 LIKNPAERADLKQLMVHAFIK 263
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 55 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 107
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 108 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 164
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 224
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 273
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 274 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 329
Query: 338 KLKKL 342
+L L
Sbjct: 330 RLTPL 334
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 123/339 (36%), Gaps = 99/339 (29%)
Query: 65 DTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
D + + P++ V Y K +G+G FG ++ + A K + K + +
Sbjct: 83 DQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE 142
Query: 125 DIKREIQIMQHLSGQP-----NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYS- 178
EI+I++HL Q N++ + + + + EL + L++ +I K +
Sbjct: 143 ----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQG 196
Query: 179 ------ERAAASICS---------------KDENALLK--------ATDFGLSVFIEEGK 209
+ A SI K EN LLK DFG S + E +
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY-EHQR 255
Query: 210 VYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE---------- 258
VY I S +Y APEV L RYG ID+WS G IL LL+G P E E
Sbjct: 256 VYXXI-QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 259 -----KGIFDA---------------------------ILQGDIDF--------ESAPWP 278
+ + DA +L G ES W
Sbjct: 315 LGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374
Query: 279 TISSSAKD-----LVRRMLTQDPKKRITSAQVLEHPWIK 312
D +++ L DP R+T Q L HPW++
Sbjct: 375 NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 123/339 (36%), Gaps = 99/339 (29%)
Query: 65 DTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
D + + P++ V Y K +G+G FG ++ + A K + K + +
Sbjct: 83 DQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE 142
Query: 125 DIKREIQIMQHLSGQP-----NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYS- 178
EI+I++HL Q N++ + + + + EL + L++ +I K +
Sbjct: 143 ----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQG 196
Query: 179 ------ERAAASICS---------------KDENALLK--------ATDFGLSVFIEEGK 209
+ A SI K EN LLK DFG S + E +
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY-EHQR 255
Query: 210 VYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE---------- 258
VY I S +Y APEV L RYG ID+WS G IL LL+G P E E
Sbjct: 256 VYTXI-QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 259 -----KGIFDA---------------------------ILQGDIDF--------ESAPWP 278
+ + DA +L G ES W
Sbjct: 315 LGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374
Query: 279 TISSSAKD-----LVRRMLTQDPKKRITSAQVLEHPWIK 312
D +++ L DP R+T Q L HPW++
Sbjct: 375 NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 105
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 162
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 222
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 271
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 272 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 327
Query: 338 KLKKL 342
+L L
Sbjct: 328 RLTPL 332
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 105
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 162
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 222
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 271
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 272 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 327
Query: 338 KLKKL 342
+L L
Sbjct: 328 RLTPL 332
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 137/319 (42%), Gaps = 57/319 (17%)
Query: 48 TPAAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQF 107
+P A V G++ + P+ ++ + +G+G FG + +N T +
Sbjct: 5 SPVAVQVPGMQNNIADPEE-------------LFTKLERIGKGSFGEVFKGIDNRTQQVV 51
Query: 108 ACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL 167
A K I + + + ++EI ++ + ++ G+Y + ++ME GG
Sbjct: 52 AIKIIDLEEAEDEIEDI--QQEITVLSQCDSS-YVTKYYGSYLKGSKLWIIMEYLGGGSA 108
Query: 168 FDRIIAKGHYSERAAASICS-------------------KDENALL------KATDFGLS 202
D ++ G + E A++ K N LL K DFG++
Sbjct: 109 LD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
Query: 203 VFIEEGKVYRD-IVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKG 260
+ + ++ R+ VG+ +++APEV+++ Y + DIWS G+ L G PP
Sbjct: 168 GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
Query: 261 IFDAILQGDIDFESAPWPTI----SSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGE 316
+ I + + PT+ + S K+ + L +DP R T+ ++L+H +I + +
Sbjct: 228 VLFLIPKNNP-------PTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSK 280
Query: 317 ASDKPIDSAVLSRMKQFRA 335
+ + ++ R K+++A
Sbjct: 281 KTSYLTE--LIDRFKRWKA 297
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 98 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 150
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 151 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 207
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 208 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 267
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 316
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 317 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 372
Query: 338 KLKKL 342
+L L
Sbjct: 373 RLTPL 377
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 47 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 99
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 100 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 156
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 216
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 265
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 266 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 321
Query: 338 KLKKL 342
+L L
Sbjct: 322 RLTPL 326
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 24 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 76
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 77 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 133
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 134 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 242
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 243 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 298
Query: 338 KLKKL 342
+L L
Sbjct: 299 RLTPL 303
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 57 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 109
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 110 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 166
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 167 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 275
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 276 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 331
Query: 338 KLKKL 342
+L L
Sbjct: 332 RLTPL 336
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 38 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 90
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 91 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 147
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 148 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 256
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 257 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 312
Query: 338 KLKKL 342
+L L
Sbjct: 313 RLTPL 317
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 32 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 84
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 85 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 141
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 142 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 201
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 250
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 251 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 306
Query: 338 KLKKL 342
+L L
Sbjct: 307 RLTPL 311
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 27 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 79
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 80 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 136
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 137 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 245
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 246 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 301
Query: 338 KLKKL 342
+L L
Sbjct: 302 RLTPL 306
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 65/297 (21%)
Query: 65 DTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
D + +G+ E +L + L G F Y + +GR++A K R L + +K+
Sbjct: 14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALK----RLLSNEEEKN 69
Query: 125 D-IKREIQIMQHLSGQPNIVEFKGAYE--------DKQSVHVVMELCAGG--ELFDRIIA 173
I +E+ M+ LSG PNIV+F A + ++ ELC G E ++ +
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129
Query: 174 KGHYS------------------ERAAASICSKD---ENALL------KATDFGLSVFIE 206
+G S R I +D EN LL K DFG + I
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
Query: 207 EGKVY------RDIV-------GSAYYVAPEVL----RRRYGKEIDIWSAGVILYILLSG 249
Y R +V + Y PE++ G++ DIW+ G ILY+L
Sbjct: 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR 249
Query: 250 VPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVL 306
PF E G I+ G + P T + L+R ML +P++R++ A+V+
Sbjct: 250 QHPF----EDGAKLRIVNG--KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 83
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 140
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 249
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 250 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 305
Query: 338 KLKKL 342
+L L
Sbjct: 306 RLTPL 310
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 409 TIDYIEFIT 417
TID+ EF+T
Sbjct: 62 TIDFPEFLT 70
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCAMM 490
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 83
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 140
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 249
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 250 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 305
Query: 338 KLKKL 342
+L L
Sbjct: 306 RLTPL 310
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 123/322 (38%), Gaps = 84/322 (26%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----R 128
P+ D Y ++G+G FG + TG++ A K K++ +N+K+ R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 66
Query: 129 EIQIMQHLSGQP--NIVEF----KGAYED-KQSVHVVMELC----AGGELFDRIIAKGHY 177
EI+I+Q L + N++E Y K S+++V + C AG L ++ K
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG--LLSNVLVKFTL 124
Query: 178 SE-------------------------RAAASICSKDENALLKATDFGLSVFIEEGK--- 209
SE +AA + ++D +LK DFGL+ K
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLAKNSQ 182
Query: 210 --VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 265
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+ I
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 266 LQGDIDFESAPWPTISS----------------------------SAKDLVRRMLTQDPK 297
Q WP + + A DL+ ++L DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 298 KRITSAQVLEHPWIKEGGEASD 319
+RI S L H + SD
Sbjct: 303 QRIDSDDALNHDFFWSDPMPSD 324
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ- 139
+S + +GRG FG Y C + TG+ +A K + K+++ K + E +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 249
Query: 140 --PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-----RAAASICS----- 187
P IV A+ + +++L GG+L + G +SE AA I
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 188 ---------------KDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RY 230
DE+ ++ +D GL+ + K + VG+ Y+APEVL++ Y
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAY 368
Query: 231 GKEIDIWSAGVILYILLSGVPPF 253
D +S G +L+ LL G PF
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ- 139
+S + +GRG FG Y C + TG+ +A K + K+++ K + E +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 249
Query: 140 --PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER-----AAASICS----- 187
P IV A+ + +++L GG+L + G +SE AA I
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 188 ---------------KDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RY 230
DE+ ++ +D GL+ + K + VG+ Y+APEVL++ Y
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAY 368
Query: 231 GKEIDIWSAGVILYILLSGVPPF 253
D +S G +L+ LL G PF
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ- 139
+S + +GRG FG Y C + TG+ +A K + K+++ K + E +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 249
Query: 140 --PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER-----AAASICS----- 187
P IV A+ + +++L GG+L + G +SE AA I
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 188 ---------------KDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RY 230
DE+ ++ +D GL+ + K + VG+ Y+APEVL++ Y
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAY 368
Query: 231 GKEIDIWSAGVILYILLSGVPPF 253
D +S G +L+ LL G PF
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ L+ E+I K+ F+ D D G IT +EL + LG TEAE+Q ++ D DGN
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK 424
GTID+ EF+ + K
Sbjct: 61 GTIDFPEFLNLMARKMK 77
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCA 488
+AF FDKD G IT EL M+ G + ++++I+EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 489 MM 490
+M
Sbjct: 71 LM 72
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G FG TG Q A K R+ ++ +++ EIQIM+ L+ P
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 73
Query: 141 NIVEFKGAYEDKQSVH------VVMELCAGGEL------FDRIIAKGHYSERAAASICS- 187
N+V + + Q + + ME C GG+L F+ R S S
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 188 ---------------KDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
K EN +L K D G + +++G++ + VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 224 EVL-RRRYGKEIDIWSAGVILYILLSGVPPF 253
E+L +++Y +D WS G + + ++G PF
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ- 139
+S + +GRG FG Y C + TG+ +A K + K+++ K + E +IM L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 248
Query: 140 --PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-----RAAASICS----- 187
P IV A+ + +++L GG+L + G +SE AA I
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 188 ---------------KDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RY 230
DE+ ++ +D GL+ + K + VG+ Y+APEVL++ Y
Sbjct: 309 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAY 367
Query: 231 GKEIDIWSAGVILYILLSGVPPF 253
D +S G +L+ LL G PF
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 23 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 75
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 76 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 132
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 133 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 241
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 242 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 297
Query: 338 KLKKL 342
+L L
Sbjct: 298 RLTPL 302
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
+ + LG G FG TG Q A K R+ ++ +++ EIQIM+ L+ P
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 72
Query: 141 NIVEFKGAYEDKQSVH------VVMELCAGGEL------FDRIIAKGHYSERAAASICS- 187
N+V + + Q + + ME C GG+L F+ R S S
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 188 ---------------KDENALL---------KATDFGLSVFIEEGKVYRDIVGSAYYVAP 223
K EN +L K D G + +++G++ + VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 224 EVL-RRRYGKEIDIWSAGVILYILLSGVPPF 253
E+L +++Y +D WS G + + ++G PF
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 20 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 72
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 73 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 129
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 130 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 238
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 239 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 294
Query: 338 KLKKL 342
+L L
Sbjct: 295 RLTPL 299
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 123/322 (38%), Gaps = 84/322 (26%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----R 128
P+ D Y ++G+G FG + TG++ A K K++ +N+K+ R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 66
Query: 129 EIQIMQHLSGQP--NIVEF----KGAYED-KQSVHVVMELC----AGGELFDRIIAKGHY 177
EI+I+Q L + N++E Y K S+++V + C AG L ++ K
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTL 124
Query: 178 SE-------------------------RAAASICSKDENALLKATDFGLSVFIEEGK--- 209
SE +AA + ++D +LK DFGL+ K
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLAKNSQ 182
Query: 210 --VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 265
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+ I
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 266 LQGDIDFESAPWPTISS----------------------------SAKDLVRRMLTQDPK 297
Q WP + + A DL+ ++L DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 298 KRITSAQVLEHPWIKEGGEASD 319
+RI S L H + SD
Sbjct: 303 QRIDSDDALNHDFFWSDPMPSD 324
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 106/265 (40%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN A K+ KN D RE
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKT-------CKNCTSDSVRE 436
Query: 130 IQIMQHLS----GQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ P+IV+ G + V ++MELC GEL +I
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 495
Query: 174 KGHYSERAAASICSKD--------ENALLKAT------DFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N L+ AT DFGLS ++E+ Y+ G
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 611
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + DK RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 107/265 (40%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN A K+ KN D RE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKT-------CKNCTSDSVRE 56
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 115
Query: 174 KGHYSERAAASICSKD--------ENALLKAT------DFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N L+ AT DFGLS ++E+ Y+ G
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 231
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 68
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 69 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFIEEGKVYRDIV----GSAYYVA 222
Y R A +I ++EN + K DFGL+ + + K Y + ++ A
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRV-KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 47/267 (17%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
E+GRG +G +G+ A K I R V + ++ + ++ ++ S P IV+F
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 146 KGAYEDKQSVHVVMELCAGG---------ELFDRIIAKGHYSERAAASICS--------- 187
GA + + MEL + + D +I + + A++ +
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 188 ------KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-----RRRY 230
K N LL K DFG+S + + G Y+APE + R+ Y
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 231 GKEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQ---GDI-DFESAPWPTISSSA 284
D+WS G+ LY L +G P+ W +FD + Q GD ++ S S
Sbjct: 207 DVRSDVWSLGITLYELATGRFPYPKW----NSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 285 KDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ V LT+D KR ++L+HP+I
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 96/230 (41%), Gaps = 44/230 (19%)
Query: 65 DTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD 124
D + + P++ V Y K +G+G FG ++ + A K + K + +
Sbjct: 83 DQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE 142
Query: 125 DIKREIQIMQHLSGQP-----NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYS- 178
EI+I++HL Q N++ + + + + EL + L++ +I K +
Sbjct: 143 ----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQG 196
Query: 179 ------ERAAASICS---------------KDENALLK--------ATDFGLSVFIEEGK 209
+ A SI K EN LLK DFG S + E +
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY-EHQR 255
Query: 210 VYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE 258
VY I S +Y APEV L RYG ID+WS G IL LL+G P E E
Sbjct: 256 VYTXI-QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 286 DLVRRMLTQDPKKRITSAQVLEHPWIK 312
D +++ L DP R+T Q L HPW++
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 121/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + K KN RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-AFKN------RELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S ++IQ Q+F D DN G ++ EEL + L LG T AE+ + G ++
Sbjct: 3 SADQIQECFQIF---DKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLN 51
Query: 412 YIEFITA---TMHRHKL----ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDD 464
EF A T++R + E+ + AF+ DK+ +G TI E E+ +GD
Sbjct: 52 AKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNG--TIQEAELRQLLLNLGDAL 109
Query: 465 T---IKEIISEVDTDNDGRINYDEFCAMMRSG 493
T ++E++ EV DG INY+ F M+ +G
Sbjct: 110 TSSEVEELMKEVSVSGDGAINYESFVDMLVTG 141
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 39/255 (15%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+G G+FG + G++ +C +I K T+ + + E IM PNI+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 82
Query: 146 KGAYEDKQSVHVVMELCAGGEL--FDRI-----------------------IAKGHYSER 180
+G + V ++ E G L F R+ +A+ Y R
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 181 -AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGS------AYYVAPEVLR-RRYGK 232
AA + N + K +DFGLS F+EE S + APE + R++
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTS 202
Query: 233 EIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
D WS G++++ ++S G P+W + + + +AI Q D+ P P +S L+
Sbjct: 203 ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSLHQLMLDC 259
Query: 292 LTQDPKKRITSAQVL 306
+D R QV+
Sbjct: 260 WQKDRNARPRFPQVV 274
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN A K+ KN D RE
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKT-------CKNCTSDSVRE 436
Query: 130 IQIMQHLS----GQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ P+IV+ G + V ++MELC GEL +I
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 495
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGSA- 218
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 219 -YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 611
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 35/257 (13%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 88
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 89 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 147
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 206
Query: 238 SAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPT--ISSSAKDLVRRMLTQD 295
S G+ L + G P + + +L ++ P+ S +D V + L ++
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 266
Query: 296 PKKRITSAQVLEHPWIK 312
P +R Q++ H +IK
Sbjct: 267 PAERADLKQLMVHAFIK 283
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 349 ENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNG 408
+ L+ E+I K+ F+ D D GTIT +EL + LG TEAE+Q ++ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 409 TIDYIEFIT 417
TID+ EF+T
Sbjct: 62 TIDFPEFLT 70
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCAMM 490
+AF +DKD G IT EL M+ G+ + ++++I+EVD D +G I++ EF MM
Sbjct: 14 EAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 354 EEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYI 413
+++ K+ F D++ +G IT E L+ L + G ++ A ++ AD GNG I +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 414 EFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIK----- 467
EF++ R K +D L +AF+ FD + +G+I L+ A+ + G D +K
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLG----DRLKPHEFA 118
Query: 468 EIISEVDTDNDGRINYDEFCAMM 490
E + +T+ G+I YD F M
Sbjct: 119 EFLGITETEK-GQIRYDNFINTM 140
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN +++ KN D RE
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--------ALAVAIKTCKNCTSDSVRE 84
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 143
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 144 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 259
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 260 PMPPNCPPTLYSLMTKCWAYDPSRR 284
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 121/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + K KN RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-AFKN------RELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L E R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 61/232 (26%)
Query: 74 YEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVT---KNDKDDIKREI 130
+E + + FGK LG G FG T G++ A ++ + L + ++K+ + E+
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 92
Query: 131 QIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG--------------- 175
+IM HL NIV GA V V+ E C G+L + + K
Sbjct: 93 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 176 ---HYSERAA---ASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
H+S + A A + SK+ N LL K DFGL+ RDI+
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---------RDIM 203
Query: 216 GSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ Y+ APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 204 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN A K+ KN D RE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKT-------CKNCTSDSVRE 56
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 115
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 231
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN +++ KN D RE
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--------ALAVAIKTCKNCTSDSVRE 61
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 120
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 121 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 236
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 237 PMPPNCPPTLYSLMTKCWAYDPSRR 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN +++ KN D RE
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--------ALAVAIKTCKNCTSDSVRE 58
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 117
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 118 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 233
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 234 PMPPNCPPTLYSLMTKCWAYDPSRR 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN +++ KN D RE
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--------ALAVAIKTCKNCTSDSVRE 59
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 118
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGSA- 218
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 119 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 219 -YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 234
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 235 PMPPNCPPTLYSLMTKCWAYDPSRR 259
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 61/232 (26%)
Query: 74 YEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTK---NDKDDIKREI 130
+E + + FGK LG G FG T G++ A ++ + L + ++K+ + E+
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 131 QIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG--------------- 175
+IM HL NIV GA V V+ E C G+L + + K
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 176 ---HYSERAA---ASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
H+S + A A + SK+ N LL K DFGL+ RDI+
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---------RDIM 211
Query: 216 GSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ Y+ APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 212 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN +++ KN D RE
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--------ALAVAIKTCKNCTSDSVRE 53
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 54 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 112
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGSA- 218
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 113 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 219 -YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 228
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 229 PMPPNCPPTLYSLMTKCWAYDPSRR 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 105/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN A K+ KN D RE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKT-------CKNCTSDSVRE 56
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 115
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGS-- 217
+ A A + SK N +K DFGLS ++E+ Y+ G
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 218 AYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 231
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 68/303 (22%)
Query: 61 VPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTK 120
VPR + ++ P E +F +E+G GQFG+ +L + + A K+I + +
Sbjct: 15 VPRGSLHMVI-DPSE-----LTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSM--- 64
Query: 121 NDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI--------- 171
+DD E ++M LS P +V+ G ++ + +V E G L D +
Sbjct: 65 -SEDDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA 122
Query: 172 ---------IAKGH-YSERA-------AASICSKDENALLKATDFGLSVFIEEGKVYRDI 214
+ +G Y E A AA C EN ++K +DFG++ F+ + + Y
Sbjct: 123 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 181
Query: 215 VGSAY---YVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDI 270
G+ + + +PEV RY + D+WS GV+++ + S +G I
Sbjct: 182 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS------------------EGKI 223
Query: 271 DFESAPWPTISSSAKDLVRRMLTQDPKKRITSA-QVLEHPWIKEGGEASDKPIDSAVLSR 329
+E+ + S +D+ P+ T Q++ H W KE E D+P S +L +
Sbjct: 224 PYENR---SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW-KERPE--DRPAFSRLLRQ 277
Query: 330 MKQ 332
+ +
Sbjct: 278 LAE 280
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 75/272 (27%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD----------DIKREIQI 132
+ K++G+G FG+ + GR KS+ K + D + + +RE+ I
Sbjct: 23 YEKQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH---------------- 176
M +L+ PNIV+ G + +VME G+L+ R++ K H
Sbjct: 77 MSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 177 ---YSERAAASIC------------SKDENALL--KATDFGLSVFIEEGKVYRDIVGSAY 219
Y + I S DENA + K DFGLS + ++G+
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQ 191
Query: 220 YVAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDF---- 272
++APE + Y ++ D +S +ILY +L+G +G FD G I F
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINMI 242
Query: 273 -ESAPWPTISSSAKDLVRRML----TQDPKKR 299
E PTI +R ++ + DPKKR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 71
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 72 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 66
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 67 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 67
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 68 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFIEEGKVYRDIV----GSAYYVA 222
Y R A +I ++EN + K DFGL+ + + K + + ++ A
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 38/257 (14%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD----IKREIQIMQHL 136
Y +LG G YL + + A K+I + +K++ +RE+ L
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREVHNSSQL 68
Query: 137 SGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSK-------- 188
S Q NIV E+ ++VME G L + I + G S A + ++
Sbjct: 69 SHQ-NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 189 -----------------DENALLKATDFGLSVFIEEGKVYRD--IVGSAYYVAPEVLRRR 229
D N LK DFG++ + E + + ++G+ Y +PE +
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 230 YGKE-IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDI-DFESAPWPTISSSAKDL 287
E DI+S G++LY +L G PPF ET I +Q + + + I S ++
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNV 247
Query: 288 VRRMLTQDPKKRITSAQ 304
+ R +D R + Q
Sbjct: 248 ILRATEKDKANRYKTIQ 264
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 98
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 99 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 65
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 66 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 70
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 71 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 67
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 68 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 85
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 86 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 69
Query: 145 FKGAYEDKQSVHVVMELCAG--GELFDR---------IIAKGHYSERAAASICS------ 187
+ +++V E + + D +I + + C
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K EN L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 130 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 72
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 73 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 73
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 74 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 67
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 68 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 67
Query: 145 FKGAYEDKQSVHVVMELCAG--GELFDR---------IIAKGHYSERAAASICS------ 187
+ +++V E + + D +I + + C
Sbjct: 68 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K EN L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 70
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 71 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 68/291 (23%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSG--QPNIVE 144
LGRG FG + + TG Q A K + + ++ R ++M +G P IV
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMA-CAGLTSPRIVP 130
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS----------------- 187
GA + V++ MEL GG L + +G E A
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 188 --KDENALLKA-------TDFGLSVFIEEGKVYRDIV------GSAYYVAPE-VLRRRYG 231
K +N LL + DFG +V ++ + +D++ G+ ++APE VL R
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL---- 287
++D+WS+ ++ +L+G P W + F L I E P I S L
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAPLTAQA 305
Query: 288 VRRMLTQDPKKRITSAQV-------------LEHPWIKEGGEASDKPIDSA 325
++ L ++P R+++A++ L+ PW E E P + A
Sbjct: 306 IQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHPPPNQA 356
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 350 NLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGT 409
++ T+ + LK+ F D D +G I+ EL+ + LG KLT+ EV+Q+++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 410 IDYIEFITATM 420
++Y EF+ M
Sbjct: 62 VNYEEFVKMMM 72
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L +AF+ FDKD +G+I+ EL M + G D+ ++++I E D D DG++NY+EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 487 CAMM 490
MM
Sbjct: 68 VKMM 71
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 67/296 (22%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTG---RQFACKSISKRKLVTK--NDK-------DDIKR 128
Y + L +G+F LC +++ +++ + K++ TK NDK DD K
Sbjct: 33 YRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKN 92
Query: 129 EIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL--FD----------------- 169
E+QI+ + + + +G + V+++ E + FD
Sbjct: 93 ELQIITDIKNEY-CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 170 --RIIAKGHYSERA----AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDI 214
+ I K + + +IC +D +N +K +DFG S ++ + K+ +
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI-KGS 210
Query: 215 VGSAYYVAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGDI 270
G+ ++ PE G ++DIWS G+ LY++ V PF + +F+ I +I
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270
Query: 271 DF---------------ESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
++ + +S+ D ++ L ++P +RITS L+H W+
Sbjct: 271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 74
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 75 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 85
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGELFDRI------------------IAKG 175
L NIV++KG ++++ ++ME G L D + I KG
Sbjct: 86 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
+ NL+ E+I K+ F D DN+G+I+ EL + LG +EAEV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 408 GTIDYIEFITATMHRH 423
I++ EF+ A M R
Sbjct: 61 HQIEFSEFL-ALMSRQ 75
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMGDDDT-IKEIISEVDTDNDGRINYDEFCAMM 490
+AF FDKDN+G I+ EL M+ G+ + + ++++E+D D + +I + EF A+M
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 178 SERAAASICSKDENALLKATDFGLSVFIEEGKV-----YRDIVGSAYYVAPEVL----RR 228
S R A + EN + +DFGL ++ G+ + G++ + APE+L +R
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAE--TEKGIFDAILQGDIDFESAPWPTISSSAK 285
R + IDI+S G + Y +LS G PF + E I I D + + ++ + A
Sbjct: 229 RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLIAEAT 287
Query: 286 DLVRRMLTQDPKKRITSAQVLEHP--WIK 312
DL+ +M+ DP KR T+ +VL HP W K
Sbjct: 288 DLISQMIDHDPLKRPTAMKVLRHPLFWPK 316
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 178 SERAAASICSKDENALLKATDFGLSVFIEEGKV-----YRDIVGSAYYVAPEVL----RR 228
S R A + EN + +DFGL ++ G+ + G++ + APE+L +R
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAE--TEKGIFDAILQGDIDFESAPWPTISSSAK 285
R + IDI+S G + Y +LS G PF + E I I D + + ++ + A
Sbjct: 229 RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLIAEAT 287
Query: 286 DLVRRMLTQDPKKRITSAQVLEHP--WIK 312
DL+ +M+ DP KR T+ +VL HP W K
Sbjct: 288 DLISQMIDHDPLKRPTAMKVLRHPLFWPK 316
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 84 GKELGRGQFGVTYLCTENSTGRQFACKSISKR-KLVTKNDKDDIKREIQIMQHLSGQPNI 142
G ++G G FGV Y N+T A K ++ + T+ K +EI++M + N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 92
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRI----------------IAKG----------- 175
VE G D + +V G L DR+ IA+G
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 176 HYSER--AAASICSKDENALLKATDFGLSVFIE---EGKVYRDIVGSAYYVAPEVLRRRY 230
H+ R +A+I DE K +DFGL+ E + + IVG+ Y+APE LR
Sbjct: 153 HHIHRDIKSANIL-LDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEI 211
Query: 231 GKEIDIWSAGVILYILLSGVP 251
+ DI+S GV+L +++G+P
Sbjct: 212 TPKSDIYSFGVVLLEIITGLP 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 84 GKELGRGQFGVTYLCTENSTGRQFACKSISKR-KLVTKNDKDDIKREIQIMQHLSGQPNI 142
G ++G G FGV Y N+T A K ++ + T+ K +EI++M + N+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 86
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRI----------------IAKG----------- 175
VE G D + +V G L DR+ IA+G
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 146
Query: 176 HYSER--AAASICSKDENALLKATDFGLSVFIE---EGKVYRDIVGSAYYVAPEVLRRRY 230
H+ R +A+I DE K +DFGL+ E + + IVG+ Y+APE LR
Sbjct: 147 HHIHRDIKSANIL-LDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEI 205
Query: 231 GKEIDIWSAGVILYILLSGVP 251
+ DI+S GV+L +++G+P
Sbjct: 206 TPKSDIYSFGVVLLEIITGLP 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 80 HYSFGKELGRGQFGVTYLC----TENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
H F ++LG+G FG +C +++TG A K + T+ D +REI+I++
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKS 70
Query: 136 LSGQPNIVEFKGAYED--KQSVHVVMELCAGGEL----------FDRI--------IAKG 175
L NIV++KG ++++ ++ME G L D I I KG
Sbjct: 71 LQ-HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 176 -------HYSER--AAASICSKDENALLKATDFGLSVFI----EEGKVYRDIVGSAYYVA 222
Y R A +I ++EN + K DFGL+ + E KV ++ A
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 223 PEVL-RRRYGKEIDIWSAGVILYILLSGV 250
PE L ++ D+WS GV+LY L + +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 129/322 (40%), Gaps = 79/322 (24%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSI------------SKRKL 117
LG Y D+K LG G G+ + +N ++ A K I + K+
Sbjct: 9 LGSRYMDLK-------PLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKI 61
Query: 118 VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVME---------------LC 162
+ + D D+I + +I+ Q + + G+ + SV++V E L
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQ--LTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE 119
Query: 163 AGGELFDRIIAKGH---------YSERAAASICSKDENALLKATDFGLSVFIE-----EG 208
LF + +G + + A++ E+ +LK DFGL+ ++ +G
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG 179
Query: 209 KVYRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSG----------------- 249
+ +V + +Y +P +L Y K ID+W+AG I +L+G
Sbjct: 180 HLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 250 --VPPFWAETEKGIFDAI---LQGDIDFESAPW----PTISSSAKDLVRRMLTQDPKKRI 300
+P E + + I ++ D+ P P IS A D + ++LT P R+
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 301 TSAQVLEHPWIKEGGEASDKPI 322
T+ + L HP++ D+PI
Sbjct: 299 TAEEALSHPYMSIYSFPMDEPI 320
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 88/155 (56%), Gaps = 13/155 (8%)
Query: 351 LSTEEIQGLKQMFTNIDT-DNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGT 409
LS+ +++ L+ F + +T + SG ++ +++ L LG + T++ ++QL++ D GNG
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 410 IDY-------IEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELE--IAMKDYGM 460
ID+ F+ ++ ++++ L +AF+ +DK+ +G+I+ D + +A D +
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQ--ELREAFRLYDKEGNGYISTDVMREILAELDETL 124
Query: 461 GDDDTIKEIISEVDTDNDGRINYDEFCAMMRSGTQ 495
+D + +I E+D D G ++++EF +M G +
Sbjct: 125 SSED-LDAMIDEIDADGSGTVDFEEFMGVMTGGDE 158
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 336 MNKLKKLALKVIAENLSTEEIQG-LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAE 394
+ K + + + E ++ E++Q L++ F D + +G I+ + ++ LA L L+ +
Sbjct: 69 FDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSED 128
Query: 395 VQQLMEAADVDGNGTIDYIEFI 416
+ +++ D DG+GT+D+ EF+
Sbjct: 129 LDAMIDEIDADGSGTVDFEEFM 150
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 84 GKELGRGQFGVTYLCTENSTGRQFACKSISKR-KLVTKNDKDDIKREIQIMQHLSGQPNI 142
G ++G G FGV Y N+T A K ++ + T+ K +EI++M + N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 92
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRI----------------IAKG----------- 175
VE G D + +V G L DR+ IA+G
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 176 HYSER--AAASICSKDENALLKATDFGLSVFIE---EGKVYRDIVGSAYYVAPEVLRRRY 230
H+ R +A+I DE K +DFGL+ E + + IVG+ Y+APE LR
Sbjct: 153 HHIHRDIKSANIL-LDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEI 211
Query: 231 GKEIDIWSAGVILYILLSGVP 251
+ DI+S GV+L +++G+P
Sbjct: 212 TPKSDIYSFGVVLLEIITGLP 232
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 68
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K EN L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 67
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K EN L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K EN L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 43/254 (16%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
KELG GQFGV L + A K I + + +D+ +E Q M LS P +V+
Sbjct: 14 KELGSGQFGVVKL-GKWKGQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPKLVK 67
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA----------------------- 181
F G + +++V E + G L + + + G E +
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLRR-RYGKEI 234
AA C D + +K +DFG++ ++ + + Y VG+ + + APEV +Y +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 235 DIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPTISS-SAKDLVRRML 292
D+W+ G++++ + S G P+ T + + QG + P ++S + ++
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR----PHLASDTIYQIMYSCW 242
Query: 293 TQDPKKRITSAQVL 306
+ P+KR T Q+L
Sbjct: 243 HELPEKRPTFQQLL 256
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 65/227 (28%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTK---NDKDDIKREIQIMQHLSGQ 139
FGK LG G FG T G++ A ++ + L + ++K+ + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG----------------------HY 177
NIV GA V V+ E C G+L + + K H+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 178 SERAA---ASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIVGSAYY 220
S + A A + SK+ N LL K DFGL+ RDI+ + Y
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---------RDIMNDSNY 220
Query: 221 V------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 65/305 (21%)
Query: 78 KLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS 137
++ Y+ K +G G FGV Y +G A K + + K KN RE+QIM+ L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-AFKN------RELQIMRKLD 71
Query: 138 GQPNIVE----FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSE-------------- 179
NIV F + E K V++ + L R+ HYS
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRV--ARHYSRAKQTLPVIYVKLYM 128
Query: 180 ----RAAA-----SICSKD----------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
R+ A IC +D + A+LK DFG + + G+ + S YY
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 221 VAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWP 278
APE++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----------- 237
Query: 279 TISSSAKDLVRRMLTQDPK-KRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFRAMN 337
+ + ++ +R M +P Q+ HPW K P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 338 KLKKL 342
+L L
Sbjct: 294 RLTPL 298
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + S C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 65/227 (28%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTK---NDKDDIKREIQIMQHLSGQ 139
FGK LG G FG T G++ A ++ + L + ++K+ + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG----------------------HY 177
NIV GA V V+ E C G+L + + K H+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 178 SERAA---ASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIVGSAYY 220
S + A A + SK+ N LL K DFGL+ RDI+ + Y
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---------RDIMNDSNY 220
Query: 221 V------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 68
Query: 145 FKGAYEDKQSVHVVMELCAGG--ELFDR---------IIAKGHYSERAAASICS------ 187
+ +++V E + + D +I + + C
Sbjct: 69 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 69
Query: 145 FKGAYEDKQSVHVVMELCAGG--ELFDR---------IIAKGHYSERAAASICS------ 187
+ +++V E + + D +I + + C
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 119 TKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL----------- 167
T+ + D E IM PN++ +G V ++ E G L
Sbjct: 48 TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 106
Query: 168 -------FDRIIAKG-------HYSERA-AASICSKDENALLKATDFGLSVFIEEGK--- 209
R IA G +Y RA AA + N + K +DFGLS F+E+
Sbjct: 107 TVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 210 VYRDIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDA 264
Y +G + APE ++ R++ D+WS G++++ ++S G P+W T + + +A
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 226
Query: 265 ILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVL 306
I Q D+ P S+ L+ +D R Q++
Sbjct: 227 IEQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 64/240 (26%)
Query: 85 KELGRGQFGVTYL--CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNI 142
+ELG G FG +L C + ++ K + N + D RE +++ +L + +I
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE-HI 77
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG---------------------HYSERA 181
V+F G + + +V E G+L + A G H +++
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 182 AASI-----------------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY---- 220
AA + C EN L+K DFG+S RD+ + YY
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS---------RDVYSTDYYRVGG 188
Query: 221 --------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDI 270
+ PE ++ R++ E D+WS GV+L+ I G P++ + + + I QG +
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 248
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 114/299 (38%), Gaps = 60/299 (20%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 70
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 71 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSR 329
+ L+ +ML DP KRI++ L HP+ ++ KP+ L R
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD----VTKPVPHLRLER 305
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 73
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 74 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVD 193
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 67
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITA 418
LK+ F D D +G I+ EL+ + LG KLT+ EV+Q+++ AD+DG+G ++Y EF+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Query: 419 TM 420
M
Sbjct: 66 MM 67
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L +AF+ FDKD +G+I+ EL M + G D+ ++++I E D D DG++NY+EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 487 CAMMRS 492
MM +
Sbjct: 63 VKMMMT 68
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 69
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 75/272 (27%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD----------DIKREIQI 132
+ K++G+G FG+ + GR KS+ K + D + + +RE+ I
Sbjct: 23 YEKQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH---------------- 176
M +L+ PNIV+ G + +VME G+L+ R++ K H
Sbjct: 77 MSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 177 ---YSERAAASIC------------SKDENALL--KATDFGLSVFIEEGKVYRDIVGSAY 219
Y + I S DENA + K DFG S + ++G+
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQ 191
Query: 220 YVAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDF---- 272
++APE + Y ++ D +S +ILY +L+G +G FD G I F
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINMI 242
Query: 273 -ESAPWPTISSSAKDLVRRML----TQDPKKR 299
E PTI +R ++ + DPKKR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F +E+G GQFG+ +L + + A K+I + + ++D E ++M LS P
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 61
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRI------------------IAKGH-YSERA- 181
+V+ G ++ + +V E G L D + + +G Y E A
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 182 ------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C EN ++K +DFG++ F+ + + Y G+ + + +PEV RY
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
+ D+WS GV+++ + S +G I +E+ + S +D+
Sbjct: 181 SKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSEVVEDISTGF 219
Query: 292 LTQDPKKRITSA-QVLEHPWIKEGGEASDKPIDSAVLSRMKQ 332
P+ T Q++ H W KE E D+P S +L ++ +
Sbjct: 220 RLYKPRLASTHVYQIMNHCW-KERPE--DRPAFSRLLRQLAE 258
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 69
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 68/289 (23%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD------IKREIQIMQHLSG 138
+++G G +G + T A K + + D DD REI +++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKELKH 60
Query: 139 QPNIVEFKGAYEDKQSVHVVMELC----------AGGELFDRIIAKGHYSERAAASICS- 187
+ NIV + + +V E C G+L I+ + C
Sbjct: 61 K-NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 188 --------KDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRY 230
K +N L LK DFGL+ F + Y V + +Y P+VL + Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETE-----KGIFDAI----------LQGDIDFESA 275
ID+WSAG I L + P + + K IF + + D++
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 276 PW-----------PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
P P ++++ +DL++ +L +P +RI++ + L+HP+ +
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 70
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 71 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 73/295 (24%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 131
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 132 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 190
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGD------------------------- 269
S G+ L + G +PP A+ + +F ++GD
Sbjct: 250 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 309
Query: 270 ------IDF-ESAPWPTISSSA-----KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+D+ + P P + S+ +D V + L ++P +R Q++ H +IK
Sbjct: 310 MAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 364
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 42/202 (20%)
Query: 85 KELGRGQFGVTYLCTE----NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
++LG G FG LC ++TG Q A KS+ N D+K+EI+I+++L +
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHE- 83
Query: 141 NIVEFKG-AYED-KQSVHVVMELCAGGELFDRI------------------IAKG----- 175
NIV++KG ED + ++ME G L + + I KG
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 176 --HYSER--AAASICSKDENALLKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL- 226
Y R AA ++ + E+ +K DFGL+ IE K V D ++ APE L
Sbjct: 144 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 227 RRRYGKEIDIWSAGVILYILLS 248
+ ++ D+WS GV L+ LL+
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 62/285 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F +E+G GQFG+ +L + + A K+I + + ++D E ++M LS P
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 63
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRI------------------IAKGH-YSERA- 181
+V+ G ++ + +V E G L D + + +G Y E A
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 182 ------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C EN ++K +DFG++ F+ + + Y G+ + + +PEV RY
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
+ D+WS GV+++ + S +G I +E+ + S +D+
Sbjct: 183 SKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSEVVEDISTGF 221
Query: 292 LTQDPKKRITSA-QVLEHPWIKEGGEASDKPIDSAVLSRMKQFRA 335
P+ T Q++ H W KE E D+P S +L ++ A
Sbjct: 222 RLYKPRLASTHVYQIMNHCW-KERPE--DRPAFSRLLRQLAAIAA 263
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITA 418
LK+ F D D +G I+ EL+ + LG KLT+ EV +++ ADVDG+G I+Y EF+
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
Query: 419 TMHR 422
M +
Sbjct: 66 MMAK 69
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L +AF+ FDKD +GFI+ EL M + G D+ + E+I E D D DG+INY+EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 487 CAMM 490
+M
Sbjct: 63 VKVM 66
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 44/264 (16%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
E+G G G + TG A K + R+ K + I ++ ++ P IV+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 146 KGAYEDKQSVHVVMEL---CA-------GGELFDRI-------IAKGHYSERAAASICSK 188
G + V + MEL CA G + +RI I K Y + + +
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 189 D---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL------RRRYGKE 233
D E +K DFG+S + + K G A Y+APE + + Y
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209
Query: 234 IDIWSAGVILYILLSGVPPFW-AETEKGIFDAILQGDIDFESAPWPT----ISSSAKDLV 288
D+WS G+ L L +G P+ +T+ + +LQ E P S + V
Sbjct: 210 ADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ-----EEPPLLPGHMGFSGDFQSFV 264
Query: 289 RRMLTQDPKKRITSAQVLEHPWIK 312
+ LT+D +KR ++LEH +IK
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 68
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 322 IDSAVLSRMKQFRAMNKLKKLALKVIAENLST--EEIQGLKQMFTNIDTDNSGTITYEEL 379
I VL+ MK + + ++ + + ++A LS I+ + ++F +DT+++G++++ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 380 KAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFD 439
LA +G K + ++ ++++A D++ G I Y EF+ A +R K L AF D
Sbjct: 62 YTVLASVGIK--KWDINRILQALDINDRGNITYTEFM-AGCYRWKNIESTFLKAAFNKID 118
Query: 440 KDNSGFITIDELEIAMKDYGMGDDD 464
KD G+I+ ++ + D + ++D
Sbjct: 119 KDEDGYISKSDIVSLVHDKVLDNND 143
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 104/265 (39%), Gaps = 52/265 (19%)
Query: 74 YEDVKLHYSFGKELGRGQFGVT----YLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
YE + G+ +G GQFG Y+ EN A K+ KN D RE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKT-------CKNCTSDSVRE 56
Query: 130 IQIMQHLSGQ----PNIVEFKGAYEDKQSVHVVMELCAGGEL------------FDRIIA 173
+ + L+ + P+IV+ G + V ++MELC GEL +I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLIL 115
Query: 174 KGHYSERAAASICSK--------------DENALLKATDFGLSVFIEEGKVYRDIVGSA- 218
+ A A + SK N +K DFGLS ++E+ + G
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 219 -YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESA 275
++APE + RR+ D+W GV ++ IL+ GV PF + I G E
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERL 231
Query: 276 PW-PTISSSAKDLVRRMLTQDPKKR 299
P P + L+ + DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F +E+G GQFG+ +L + + A K+I + + ++D E ++M LS P
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 63
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRI------------------IAKGH-YSERA- 181
+V+ G ++ + +V E G L D + + +G Y E A
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 182 ------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C EN ++K +DFG++ F+ + + Y G+ + + +PEV RY
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRM 291
+ D+WS GV+++ + S +G I +E+ + S +D+
Sbjct: 183 SKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSEVVEDISTGF 221
Query: 292 LTQDPKKRITSA-QVLEHPWIKEGGEASDKPIDSAVLSRMKQ 332
P+ T Q++ H W KE E D+P S +L ++ +
Sbjct: 222 RLYKPRLASTHVYQIMNHCW-KERPE--DRPAFSRLLRQLAE 260
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 73
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 74 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 193
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 67
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ ++ H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D +A LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS GVI+ ++ G F W + + + F LQ + E
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 69
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 68
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 65
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 67
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 75/272 (27%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKD----------DIKREIQI 132
+ K++G+G FG+ + GR KS+ K + D + + +RE+ I
Sbjct: 23 YEKQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH---------------- 176
M +L+ PNIV+ G + +VME G+L+ R++ K H
Sbjct: 77 MSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 177 ---YSERAAASIC------------SKDENALL--KATDFGLSVFIEEGKVYRDIVGSAY 219
Y + I S DENA + K DF LS + ++G+
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQ 191
Query: 220 YVAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDF---- 272
++APE + Y ++ D +S +ILY +L+G +G FD G I F
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINMI 242
Query: 273 -ESAPWPTISSSAKDLVRRML----TQDPKKR 299
E PTI +R ++ + DPKKR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 65
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 65
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 65
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 37/197 (18%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F +E+G GQFG+ +L + + A K+I + + ++D E ++M LS P
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 66
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRI------------------IAKGH-YSERA- 181
+V+ G ++ + +V E G L D + + +G Y E A
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 182 ------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C EN ++K +DFG++ F+ + + Y G+ + + +PEV RY
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 232 KEIDIWSAGVILYILLS 248
+ D+WS GV+++ + S
Sbjct: 186 SKSDVWSFGVLMWEVFS 202
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 193
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 254 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 314 FAQYHDPDDEPV 325
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 125
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRW 183
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 304 FAQYHDPDDEPV 315
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 393 AEVQQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDE-L 451
A + + D D NG ID+ EFI A + E +D L AFQ +D DN+G I+ DE L
Sbjct: 63 AFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122
Query: 452 EIAMKDYGM--------GDDDT----IKEIISEVDTDNDGRINYDEFC 487
I Y M D+DT + +I + +D + DG++ +EFC
Sbjct: 123 RIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 178 SERAAASICSKDENALLKATDFGLSVFIEEGKV-----YRDIVGSAYYVAPEVL------ 226
S R A + EN + +DFGL ++ G+ + G++ + APE+L
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNL 210
Query: 227 --RRRYGKEIDIWSAGVILYILLS-GVPPFWAE--TEKGIFDAILQGDIDFESAPWPTIS 281
+RR + IDI+S G + Y +LS G PF + E I I D + + ++
Sbjct: 211 QTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLI 269
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHP--WIK 312
+ A DL+ +M+ DP KR T+ +VL HP W K
Sbjct: 270 AEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 42/202 (20%)
Query: 85 KELGRGQFGVTYLCTE----NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
++LG G FG LC ++TG Q A KS+ N D+K+EI+I+++L +
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHE- 71
Query: 141 NIVEFKG-AYED-KQSVHVVMELCAGGELFDRI------------------IAKG----- 175
NIV++KG ED + ++ME G L + + I KG
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 176 --HYSER--AAASICSKDENALLKATDFGLSVFIEEGK----VYRDIVGSAYYVAPEVL- 226
Y R AA ++ + E+ +K DFGL+ IE K V D ++ APE L
Sbjct: 132 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 227 RRRYGKEIDIWSAGVILYILLS 248
+ ++ D+WS GV L+ LL+
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 69
Query: 145 FKGAYEDKQSVHVV-----------MELCAGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V M+ A + +I + + C
Sbjct: 70 LLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A K I + T+ REI +++ L+ PNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 65
Query: 145 FKGAYEDKQSVHVV-----------MELCAGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V M+ A + +I + + C
Sbjct: 66 LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 122/311 (39%), Gaps = 62/311 (19%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMEL----------CAGGE------L 167
+++++H+ + N++ + E+ V++V L CA L
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 168 FDRIIAKGHYSERA-------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
+I+ Y A S + +E+ LK DFGL+ ++ V + +Y
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWY 184
Query: 221 VAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ----------G 268
APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 244
Query: 269 DIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPWI 311
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 245 KISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Query: 312 KEGGEASDKPI 322
+ + D+P+
Sbjct: 305 AQYHDPDDEPV 315
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACK-SISKRKLVTKNDKDDIKREIQIMQH--LSGQPNIV 143
LG G +G + GR +A K S+S + KD ++ ++ H + P V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSP----FRGPKDRARKLAEVGSHEKVGQHPCCV 120
Query: 144 EFKGAYEDKQSVHVVMELCA-------------------GGELFDRIIAKGHYSERAAAS 184
+ A+E+ +++ ELC G L D ++A H +
Sbjct: 121 RLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVH 180
Query: 185 ICSKDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWS 238
+ K N L K DFGL V + G Y+APE+L+ YG D++S
Sbjct: 181 LDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFS 240
Query: 239 AGV-ILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPK 297
G+ IL + + P E + + QG + E +SS + ++ ML DPK
Sbjct: 241 LGLTILEVACNMELPHGGEG----WQQLRQGYLPPEFT--AGLSSELRSVLVMMLEPDPK 294
Query: 298 KRITSAQVLEHPWIKE 313
R T+ +L P +++
Sbjct: 295 LRATAEALLALPVLRQ 310
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 355 EIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIE 414
+IQ K+ F ID + G I E+L LA +G T+ ++ +M A G I++
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPINFTM 60
Query: 415 FITATMHRHKL---ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGD---DDTIKE 468
F+ TM KL + +D + AF FD++ SGFI D L + MGD D+ + E
Sbjct: 61 FL--TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLT--TMGDRFTDEEVDE 116
Query: 469 IISEVDTDNDGRINYDEFCAMMRSGTQ 495
+ E D G NY EF +++ G +
Sbjct: 117 MYREAPIDKKGNFNYVEFTRILKHGAK 143
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 115/301 (38%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + G A K +S R + RE+ +++ ++ +
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNHK- 81
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 141
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 142 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 229 RYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQGDID--F 272
Y + +DIWS G I+ L+ G F W + T F A LQ +
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 258
Query: 273 ESAP-WPTI---------------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
E+ P +P I +S A+DL+ +ML DP KRI+ + L HP+
Sbjct: 259 ENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318
Query: 311 I 311
I
Sbjct: 319 I 319
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 178 SERAAASICSKDENALLKATDFGLSVFIEEGKV-----YRDIVGSAYYVAPEVL------ 226
S R A + EN + +DFGL ++ G+ + G++ + APE+L
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNL 210
Query: 227 --RRRYGKEIDIWSAGVILYILLS-GVPPFWAE--TEKGIFDAILQGDIDFESAPWPTIS 281
+RR + IDI+S G + Y +LS G PF + E I I D + + ++
Sbjct: 211 QTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLI 269
Query: 282 SSAKDLVRRMLTQDPKKRITSAQVLEHP--WIK 312
+ A DL+ +M+ DP KR T+ +VL HP W K
Sbjct: 270 AEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ ++ H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D +A LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS GVI+ ++ G F W + + + F LQ + E
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 67/229 (29%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTK---NDKDDIKREIQIMQHLSGQ 139
FGK LG G FG T G++ A ++ + L + ++K+ + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG------------------------ 175
NIV GA V V+ E C G+L + + K
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 176 HYSERAA---ASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIVGSA 218
H+S + A A + SK+ N LL K DFGL+ RDI+ +
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---------RDIMNDS 220
Query: 219 YYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
Y+ APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 119 TKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL----------- 167
T+ + D E IM PN++ +G V ++ E G L
Sbjct: 74 TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 132
Query: 168 -------FDRIIAKG-------HYSER-AAASICSKDENALLKATDFGLSVFIEEGK--- 209
R IA G +Y R AA + N + K +DFGLS F+E+
Sbjct: 133 TVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 210 VYRDIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDA 264
Y +G + APE ++ R++ D+WS G++++ ++S G P+W T + + +A
Sbjct: 193 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 252
Query: 265 ILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVL 306
I Q D+ P S+ L+ +D R Q++
Sbjct: 253 IEQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 291
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 149
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 207
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 268 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 328 FAQYHDPDDEPV 339
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQF-ACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
H + +LG+G FG LC + G A ++ + + + + D +REIQI++ L
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 139 QPNIVEFKGAY--EDKQSVHVVMELCAGGELFDRI------------------IAKGH-- 176
IV+++G +QS+ +VME G L D + I KG
Sbjct: 72 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 177 -------YSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDI----VGSAYYVAPEV 225
+ + AA +I + E A +K DFGL+ + K Y + ++ APE
Sbjct: 131 LGSRRCVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 226 LRRR-YGKEIDIWSAGVILYILLS 248
L + ++ D+WS GV+LY L +
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 125
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 183
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 304 FAQYHDPDDEPV 315
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 91 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 148
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 206
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 267 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 327 FAQYHDPDDEPV 338
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 37/197 (18%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F +E+G GQFG+ +L + + A K+I + + ++D E ++M LS P
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 64
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRI------------------IAKGH-YSERA- 181
+V+ G ++ + +V E G L D + + +G Y E A
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 182 ------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C EN ++K +DFG++ F+ + + Y G+ + + +PEV RY
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 232 KEIDIWSAGVILYILLS 248
+ D+WS GV+++ + S
Sbjct: 184 SKSDVWSFGVLMWEVFS 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 70 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 128
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGD------------------------- 269
S G+ L + G +PP A+ + +F ++GD
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 270 ------IDF-ESAPWPTISSSA-----KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+D+ + P P + S +D V + L ++P +R Q++ H +IK
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQF-ACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
H + +LG+G FG LC + G A ++ + + + + D +REIQI++ L
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 139 QPNIVEFKGAY--EDKQSVHVVMELCAGGELFDRI------------------IAKGH-- 176
IV+++G +QS+ +VME G L D + I KG
Sbjct: 71 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 177 -------YSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDI----VGSAYYVAPEV 225
+ + AA +I + E A +K DFGL+ + K Y + ++ APE
Sbjct: 130 LGSRRCVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 226 LRRR-YGKEIDIWSAGVILYILLS 248
L + ++ D+WS GV+LY L +
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 70 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 128
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGD------------------------- 269
S G+ L + G +PP A+ + +F ++GD
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 270 ------IDF-ESAPWPTISSSA-----KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+D+ + P P + S +D V + L ++P +R Q++ H +IK
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 81
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 82 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 139
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 197
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 257
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 258 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 317
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 318 FAQYHDPDDEPV 329
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 114/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + G A K +S R + RE+ +++ ++ +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM 200
Query: 229 RYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQGDID--F 272
Y +DIWS G I+ L+ G F W + T F A LQ +
Sbjct: 201 GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 260
Query: 273 ESAP-WPTI---------------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
E+ P +P I +S A+DL+ +ML DP KRI+ + L HP+
Sbjct: 261 ENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 320
Query: 311 I 311
I
Sbjct: 321 I 321
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 96
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 97 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 155
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 214
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGD------------------------- 269
S G+ L + G +PP A+ + +F ++GD
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP 274
Query: 270 ------IDF-ESAPWPTISSSA-----KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+D+ + P P + S +D V + L ++P +R Q++ H +IK
Sbjct: 275 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 329
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E++ LK DFGL+ ++ V + +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--GYVATRW 189
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 310 FAQYHDPDDEPV 321
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 149
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--XGXVATRW 207
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 268 GDIDFES--------APWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ES A P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 268 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 328 FAQYHDPDDEPV 339
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 193
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 314 FAQYHDPDDEPV 325
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 109/299 (36%), Gaps = 80/299 (26%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK-REIQIMQHLSGQPNIV 143
++LG G + Y +TG A K + KL ++ REI +M+ L + NIV
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKELKHE-NIV 66
Query: 144 EFKGAYEDKQSVHVVMELC-----------------AGGELFDRIIAKGHYSERAAASIC 186
+ + +V E G EL ++ + + C
Sbjct: 67 RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLEL--NLVKYFQWQLLQGLAFC 124
Query: 187 S---------KDENAL------LKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RR 228
K +N L LK DFGL+ F + V + +Y AP+VL R
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 229 RYGKEIDIWSAGVILYILLSGVPPFWA----ETEKGIFDAILQGDIDFESAPWPTISSSA 284
Y IDIWS G IL +++G P F E K IFD + + + WP+++
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN----ESLWPSVTKLP 240
Query: 285 K------------------------------DLVRRMLTQDPKKRITSAQVLEHPWIKE 313
K D + +L +P R+++ Q L HPW E
Sbjct: 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + ++ +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E++ LK DFGL ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E++ LK DFGL+ ++ V + +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--GYVATRW 193
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 314 FAQYHDPDDEPV 325
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 84 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 141
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 199
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 320 FAQYHDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 84 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 141
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 199
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 320 FAQYHDPDDEPV 331
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 189
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 310 FAQYHDPDDEPV 321
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +SK + K RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRE 83
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 84 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 141
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 199
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 320 FAQYHDPDDEPV 331
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 189
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 310 FAQYHDPDDEPV 321
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 70 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 128
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGD------------------------- 269
S G+ L + G +PP A+ + +F ++GD
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 270 ------IDF-ESAPWPTISSSA-----KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+D+ + P P + S +D V + L ++P +R Q++ H +IK
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV + + +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK-GHYSERAAASIC------------------ 186
GA+ + + ME GG L D+++ K G E+ +
Sbjct: 70 YGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 128
Query: 187 --SKDENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
K N L +K DFG+S + + + VG+ Y++PE L+ Y + DIW
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 238 SAGVILYILLSG---VPPFWAETEKGIFDAILQGD------------------------- 269
S G+ L + G +PP A+ + +F ++GD
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 270 ------IDF-ESAPWPTISSSA-----KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
+D+ + P P + S +D V + L ++P +R Q++ H +IK
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 194
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 315 FAQYHDPDDEPV 326
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQF-ACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
H + +LG+G FG LC + G A ++ + + + + D +REIQI++ L
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 139 QPNIVEFKGAY--EDKQSVHVVMELCAGGELFDRI------------------IAKGH-- 176
IV+++G +QS+ +VME G L D + I KG
Sbjct: 84 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 177 -------YSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDI----VGSAYYVAPEV 225
+ + AA +I + E A +K DFGL+ + K Y + ++ APE
Sbjct: 143 LGSRRCVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 226 LRRR-YGKEIDIWSAGVILYILLS 248
L + ++ D+WS GV+LY L +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 189
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 310 FAQYHDPDDEPV 321
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 69 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 126
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 184
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 245 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 305 FAQYHDPDDEPV 316
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 193
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 314 FAQYHDPDDEPV 325
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GXVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 192
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 313 FAQYHDPDDEPV 324
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 95 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 152
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--XGYVATRW 210
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 271 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 331 FAQYHDPDDEPV 342
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 83 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 140
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 198
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 259 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 319 FAQYHDPDDEPV 330
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQF 125
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 183
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 304 FAQYHDPDDEPV 315
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 149
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 207
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 268 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 328 FAQYHDPDDEPV 339
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 192
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 313 FAQYHDPDDEPV 324
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 74/245 (30%)
Query: 74 YEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVT---KNDKDDIKREI 130
+E + + FGK LG G FG T G++ A ++ + L + ++K+ + E+
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 85
Query: 131 QIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-----------IAKG---- 175
+IM HL NIV GA V V+ E C G+L + + +A G
Sbjct: 86 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 176 ----------------HYSERAA---ASICSKD--------ENALL------KATDFGLS 202
H+S + A A + SK+ N LL K DFGL+
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 205
Query: 203 VFIEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS- 248
RDI+ + Y+ APE + Y + D+WS G++L+ + S
Sbjct: 206 ---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 256
Query: 249 GVPPF 253
G+ P+
Sbjct: 257 GLNPY 261
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 70
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 71 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 128
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 186
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 246
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 247 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 306
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 307 FAQYHDPDDEPV 318
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 83 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 140
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRW 198
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 259 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 319 FAQYHDPDDEPV 330
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 350 NLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGT 409
L+ E+ Q +++ F DTD SGTI +ELK + LG + + E+++++ D DG+GT
Sbjct: 23 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT 82
Query: 410 IDYIEFIT 417
ID+ EF+T
Sbjct: 83 IDFEEFLT 90
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 426 ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYD 484
E+ + +AF FD D SG I EL++AM+ G + IK++ISE+D D G I+++
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 485 EFCAMM 490
EF MM
Sbjct: 87 EFLTMM 92
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 384 ARLGSKLTEAEVQQLMEAADV---DGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDK 440
R+G LTE + Q++ EA D+ DG+GTID E A + + + K DK
Sbjct: 20 GRVG--LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDK 77
Query: 441 DNSGFITIDELEIAM 455
D SG I +E M
Sbjct: 78 DGSGTIDFEEFLTMM 92
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 91 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 148
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 206
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 267 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 327 FAQYHDPDDEPV 338
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 95 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 152
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 210
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 271 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 331 FAQYHDPDDEPV 342
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRW 192
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 313 FAQYHDPDDEPV 324
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 69 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQF 126
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 184
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 245 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 305 FAQYHDPDDEPV 316
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 69
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 70 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQF 127
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 185
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 245
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 246 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 305
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 306 FAQYHDPDDEPV 317
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 51/259 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
K +GRG F + TG+ +A K ++K ++ + + + E ++ + + I +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQ 125
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS----------------- 187
A++D+ +++VME GG+L +++K + ER A +
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLL-TLLSK--FGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 188 ------KDENALL------KATDFGLSVFIEEGKVYRDIV--GSAYYVAPEVLR------ 227
K +N LL + DFG + + R +V G+ Y++PE+L+
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 228 --RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSS-- 283
YG E D W+ GV Y + G PF+A++ + I+ E P +
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK---EHLSLPLVDEGVP 299
Query: 284 --AKDLVRRMLTQDPKKRI 300
A+D ++R+L P+ R+
Sbjct: 300 EEARDFIQRLLCP-PETRL 317
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 55/258 (21%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSG--QPNIVE 144
LGRG FG + + TG Q A K + + ++ R ++M +G P IV
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMA-CAGLTSPRIVP 149
Query: 145 FKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICS----------------- 187
GA + V++ MEL GG L + +G E A
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 188 --KDENALLKA-------TDFGLSVFIEEGKVYRDIV------GSAYYVAPE-VLRRRYG 231
K +N LL + DFG +V ++ + + ++ G+ ++APE VL R
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 232 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDL---- 287
++D+WS+ ++ +L+G P W + F L I E P I S L
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAPLTAQA 324
Query: 288 VRRMLTQDPKKRITSAQV 305
++ L ++P R+++A++
Sbjct: 325 IQEGLRKEPIHRVSAAEL 342
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSER--------AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AAA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLAAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ LS E+I K+ F D D G IT EEL + L TE E+Q ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 408 GTIDYIEFITATMHRHK 424
GTI++ EF++ + K
Sbjct: 61 GTIEFDEFLSLMAKKVK 77
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
+AF FDKD G IT++EL ++ ++ ++++ISEVD D +G I +DEF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRW 192
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 313 FAQYHDPDDEPV 324
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 56/264 (21%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYL-CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM 133
EDV L+ + LG G FG Y N G + + +K T ++K+ E IM
Sbjct: 24 EDVVLN----RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 134 QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI-------- 185
++L P+IV+ G E++ + ++MEL GEL GHY ER S+
Sbjct: 80 KNLD-HPHIVKLIGIIEEEPT-WIIMELYPYGEL-------GHYLERNKNSLKVLTLVLY 130
Query: 186 ---------------CSKDENAL----------LKATDFGLSVFIEEGKVYRDIVG--SA 218
C + A+ +K DFGLS +IE+ Y+ V
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 219 YYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAP 276
+++PE + RR+ D+W V ++ +LS G PF+ K + + +GD P
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----RLP 246
Query: 277 WPTISSSA-KDLVRRMLTQDPKKR 299
P + L+ R DP R
Sbjct: 247 KPDLCPPVLYTLMTRCWDYDPSDR 270
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 55/274 (20%)
Query: 84 GKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIV 143
G+ LG+G FG T TG K + + + + +E+++M+ L PN++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPNVL 70
Query: 144 EFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGHYSERAAASI 185
+F G + ++ + E GG L F + IA G + I
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 186 --------CSKDENALLKATDFGLSVFIEEGKVYRD---------------IVGSAYYVA 222
C EN + DFGL+ + + K + +VG+ Y++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 223 PEVLR-RRYGKEIDIWSAGVILYILLSGV---PPFWAETEKGIFDAILQGDIDFESAPWP 278
PE++ R Y +++D++S G++L ++ V P + T F ++G +D P P
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFLD-RYCP-P 246
Query: 279 TISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
S + R DP+KR + + LEH W++
Sbjct: 247 NCPPSFFPITVRCCDLDPEKRPSFVK-LEH-WLE 278
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 56/264 (21%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYL-CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM 133
EDV L+ + LG G FG Y N G + + +K T ++K+ E IM
Sbjct: 12 EDVVLN----RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 134 QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI-------- 185
++L P+IV+ G E++ + ++MEL GEL GHY ER S+
Sbjct: 68 KNLD-HPHIVKLIGIIEEEPT-WIIMELYPYGEL-------GHYLERNKNSLKVLTLVLY 118
Query: 186 ---------------CSKDENAL----------LKATDFGLSVFIEEGKVYRDIVG--SA 218
C + A+ +K DFGLS +IE+ Y+ V
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 219 YYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAP 276
+++PE + RR+ D+W V ++ +LS G PF+ K + + +GD P
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----RLP 234
Query: 277 WPTISSSA-KDLVRRMLTQDPKKR 299
P + L+ R DP R
Sbjct: 235 KPDLCPPVLYTLMTRCWDYDPSDR 258
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 108/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A I + T+ REI +++ L+ PNIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 66
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 108/283 (38%), Gaps = 56/283 (19%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVE 144
+++G G +GV Y TG A I + T+ REI +++ L+ PNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELN-HPNIVK 65
Query: 145 FKGAYEDKQSVHVVMELC-----------AGGELFDRIIAKGHYSERAAASICS------ 187
+ +++V E A + +I + + C
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 188 ---KDENALL------KATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVLR--RRYGKEID 235
K +N L+ K DFGL+ F + Y V + +Y APE+L + Y +D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 236 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------------- 282
IWS G I +++ F ++E I + + WP ++S
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 283 ------------SAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
+ L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 56/264 (21%)
Query: 75 EDVKLHYSFGKELGRGQFGVTYL-CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIM 133
EDV L+ + LG G FG Y N G + + +K T ++K+ E IM
Sbjct: 8 EDVVLN----RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 134 QHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASI-------- 185
++L P+IV+ G E++ + ++MEL GEL GHY ER S+
Sbjct: 64 KNLD-HPHIVKLIGIIEEEPT-WIIMELYPYGEL-------GHYLERNKNSLKVLTLVLY 114
Query: 186 ---------------CSKDENAL----------LKATDFGLSVFIEEGKVYRDIVG--SA 218
C + A+ +K DFGLS +IE+ Y+ V
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 219 YYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAP 276
+++PE + RR+ D+W V ++ +LS G PF+ K + + +GD P
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----RLP 230
Query: 277 WPTISSSA-KDLVRRMLTQDPKKR 299
P + L+ R DP R
Sbjct: 231 KPDLCPPVLYTLMTRCWDYDPSDR 254
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 42/224 (18%)
Query: 128 REIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAG-----------GELFDRIIAKGH 176
RE+Q+++ PN++ + +D+Q ++ +ELCA L I
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ 125
Query: 177 YSERAAASICS--------KDENALLKA-----------TDFGLSVFIEEGK----VYRD 213
+ A + S K N L+ +DFGL + G+
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 214 IVGSAYYVAPEVL----RRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ G+ ++APE+L + +DI+SAG + Y ++S G PF ++ IL G
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLG 243
Query: 269 DIDFESA-PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P A++L+ +M+ DP+KR ++ VL+HP+
Sbjct: 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ + V + +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRW 194
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 315 FAQYHDPDDEPV 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ + V + +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRW 194
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 315 FAQYHDPDDEPV 326
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DFGL+ + V + +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRW 194
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 315 FAQYHDPDDEPV 326
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ ++ H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D +A LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS G I+ ++ G F W + + + F LQ + E
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++VME + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 362 MFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF--ITAT 419
+F +D + G+++YEE+KA ++ E +Q + +A D+DGNG ID EF A
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 420 MHRHKLERDD-HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDND 478
+ L + L ++ D D G +T +E+ K +G + + + I + D + D
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVVDQIMKADANGD 121
Query: 479 GRINYDEFCAM 489
G I +EF A
Sbjct: 122 GYITLEEFLAF 132
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 336 MNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEV 395
+ + K A V ++LS E++ GLK ++ +D D G +T EE+ + G E V
Sbjct: 55 LAEFTKFAAAVKEQDLSDEKV-GLKILYKLMDADGDGKLTKEEVTTFFKKFG---YEKVV 110
Query: 396 QQLMEAADVDGNGTIDYIEFITATM 420
Q+M+ AD +G+G I EF+ +
Sbjct: 111 DQIMK-ADANGDGYITLEEFLAFNL 134
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 393 AEVQQLMEAADVDGNGTIDYIEFITATMHRHK-LERDDHLYKAFQHFDKDNSGFITIDEL 451
AE+Q ++ D DGNGTID+ EF+T + K + ++ + +AF+ FDKD +G+I+ EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 452 EIAMKDYG 459
M + G
Sbjct: 61 RHVMTNLG 68
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
L+ M +D D +GTI + E +AR + +E E+++ D DGNG +I+
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG------YIS 56
Query: 418 ATMHRHKL 425
A RH +
Sbjct: 57 AAELRHVM 64
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 110/289 (38%), Gaps = 68/289 (23%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDD------IKREIQIMQHLSG 138
+++G G +G + T A K + + D DD REI +++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKELKH 60
Query: 139 QPNIVEFKGAYEDKQSVHVVMELC----------AGGELFDRIIAKGHYSERAAASICSK 188
+ NIV + + +V E C G+L I+ + C
Sbjct: 61 K-NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 189 ---------------DENALLKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRRY 230
+ N LK +FGL+ F + Y V + +Y P+VL + Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 231 GKEIDIWSAGVILYILLSGVPPFWAETE-----KGIFDAI----------LQGDIDFESA 275
ID+WSAG I L + P + + K IF + + D++
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 276 PW-----------PTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
P P ++++ +DL++ +L +P +RI++ + L+HP+ +
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 348 AENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGN 407
A+ LS E+I K+ F D D G IT EEL + L TE E+Q ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 408 GTIDYIEFIT 417
GTI++ EF++
Sbjct: 61 GTIEFDEFLS 70
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 433 KAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
+AF FDKD G IT++EL ++ ++ ++++ISEVD D +G I +DEF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK D+GL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 71/299 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
+ G N+ + + E+ Q V++VMEL ++I ER +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 183 --ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY 230
A I +D +A LK DFGL+ + V + YY APEV L Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 231 GKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FES 274
+ +DIWS G I+ ++ G F W + + + F LQ + E+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 275 AP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 50/226 (22%)
Query: 124 DDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI------------ 171
+++++E ++ L PNI+ +G + ++ +VME GG L +R+
Sbjct: 51 ENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILV 108
Query: 172 -----IAKG--HYSERAAASICSKD-----------------ENALLKATDFGLSVFIEE 207
IA+G + + A I +D N +LK TDFGL+ E
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EW 166
Query: 208 GKVYRDIVGSAY-YVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 265
+ + AY ++APEV+R + K D+WS GV+L+ LL+G PF +GI
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-----RGIDGLA 221
Query: 266 LQGDIDFESAPWPTISSSAKDLVRRM---LTQDPKKRITSAQVLEH 308
+ + P S+ + + M DP R + +L+
Sbjct: 222 VAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 71/299 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
+ G N+ + + E+ Q V++VMEL ++I ER +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 183 --ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY 230
A I +D +A LK DFGL+ + V + YY APEV L Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 231 GKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FES 274
+ +DIWS G I+ ++ G F W + + + F LQ + E+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 275 AP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 113/300 (37%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------ 182
NI+ + E+ Q V++VMEL ++I ER +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 183 ---ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 266 -------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L F + +P S S A+DL+ +ML DP KRI+ L+HP+I
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V+E + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 103/251 (41%), Gaps = 47/251 (18%)
Query: 64 PDTNTILG-KPYEDV-KLHYSFGKEL-----------GRGQFGVTYLCTENSTGRQFACK 110
P T T + + YED + + F KEL G G+FG G++
Sbjct: 15 PGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAV 74
Query: 111 SISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL-- 167
+I K+ T+ + D E IM PN+V +G + V +V+E G L
Sbjct: 75 AIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 168 ----------------FDRIIAKGH-------YSER-AAASICSKDENALLKATDFGLSV 203
R IA G Y R AA + N + K +DFGLS
Sbjct: 134 FLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSR 193
Query: 204 FIEEG--KVYRDIVGS--AYYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAET 257
IE+ VY G + APE ++ R++ D+WS G++++ ++S G P+W +
Sbjct: 194 VIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
Query: 258 EKGIFDAILQG 268
+ + AI +G
Sbjct: 254 NQDVIKAIEEG 264
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 43/243 (17%)
Query: 48 TPAAAPVSGLKQAVPRPDTNTILG-----KPYEDVKLHYSFGKELGRGQFGVTYLCTENS 102
T A ++ L P+ + TI G +E + + +LG GQ+G Y
Sbjct: 184 TVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 243
Query: 103 TGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELC 162
A K++ + + + ++ +E +M+ + PN+V+ G + +++ E
Sbjct: 244 YSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFM 298
Query: 163 AGGELFD--------------------RIIAKGHYSERA-------AASICSKDENALLK 195
G L D +I + Y E+ AA C EN L+K
Sbjct: 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVK 358
Query: 196 ATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEIDIWSAGVILY-ILLSGV 250
DFGLS + G Y G+ + + APE L ++ + D+W+ GV+L+ I G+
Sbjct: 359 VADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Query: 251 PPF 253
P+
Sbjct: 418 SPY 420
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 108/278 (38%), Gaps = 70/278 (25%)
Query: 85 KELGRGQFGVTYL--CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNI 142
+ELG G FG +L C S + ++ K T + D +RE +++ +L + +I
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE-HI 79
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRIIAKG--------------------------- 175
V+F G D + +V E G+L + A G
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 176 -------------HYSERAAASI-CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY- 220
H+ R A+ C N L+K DFG+S RD+ + YY
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS---------RDVYSTDYYR 190
Query: 221 -----------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQ 267
+ PE ++ R++ E D+WS GVIL+ I G P++ + + + I Q
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 268 GDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQV 305
G + P D++ ++P++R+ ++
Sbjct: 251 GRVLERPRVCP---KEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ L +AF+ FD+D +G I+ EL M + G DD + E+I E D D DG INY+EF
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
Query: 487 CAMMRS 492
MM S
Sbjct: 67 VRMMVS 72
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFI 416
L + F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G I+Y EF+
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 113/300 (37%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------ 182
NI+ + E+ Q V++VMEL ++I ER +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 183 ---ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 266 -------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L F + +P S S A+DL+ +ML DP KRI+ L+HP+I
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 76 DVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQH 135
+V+ Y + +G G +G + TG + A K + R ++ RE+++++H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 136 LSGQPNIVEFKGAY------EDKQSVHVVMELCAG--GELF-------DRI------IAK 174
+ + N++ + +D ++VM G+L DRI + K
Sbjct: 81 MRHE-NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 175 GHYSERAAASI--------CSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL 226
G AA I + +E+ LK DFGL+ + V + +Y APEV+
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVI 197
Query: 227 RR--RYGKEIDIWSAGVILYILLSG---------------------VPP--FWAETEKGI 261
RY + +DIWS G I+ +++G PP F +
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257
Query: 262 FDAILQGDIDFESAPWPTISSSAK----DLVRRMLTQDPKKRITSAQVLEHPWIKEGGEA 317
++G + E + +I ++A +L+ +ML D ++R+T+ + L HP+ + +
Sbjct: 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 317
Query: 318 SDKP 321
D+P
Sbjct: 318 EDEP 321
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 45/272 (16%)
Query: 63 RPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND 122
+P T + +E + +LG+G FG ++ T N T R A K++ +
Sbjct: 169 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNM----S 223
Query: 123 KDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI----------- 171
+ +E Q+M+ L + + + A ++ +++V E + G L D +
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 281
Query: 172 --------IAKGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDI 214
IA G Y ER AA+I EN + K DFGL IE+ + Y
Sbjct: 282 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLGRLIEDNE-YTAR 339
Query: 215 VGSAY---YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGD 269
G+ + + APE L R+ + D+WS G++L L + G P+ + + D + +G
Sbjct: 340 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG- 398
Query: 270 IDFESAPWPTISSSAKDLVRRMLTQDPKKRIT 301
+ P S DL+ + +DP++R T
Sbjct: 399 --YRMPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 113/300 (37%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------ 182
NI+ + E+ Q V++VMEL ++I ER +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 183 ---ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 266 -------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L F + +P S S A+DL+ +ML DP KRI+ L+HP+I
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 104/288 (36%), Gaps = 68/288 (23%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK----REIQIMQHLSGQPN 141
+LG G +G Y + T A K I +++++ + RE+ +++ L + N
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIR-----LEHEEEGVPGTAIREVSLLKELQHR-N 94
Query: 142 IVEFKGAYEDKQSVHVVMELCAGG---------ELFDRIIAKGHYSERAAASICSK---- 188
I+E K +H++ E ++ R+I Y + C
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 189 ----------------DENALLKATDFGLS-VFIEEGKVYRDIVGSAYYVAPEVL--RRR 229
E +LK DFGL+ F + + + + +Y PE+L R
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRH 214
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISS------- 282
Y +DIWS I +L P F ++E I + + WP +++
Sbjct: 215 YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQS 274
Query: 283 ----SAKDLVR---------------RMLTQDPKKRITSAQVLEHPWI 311
K L R ML DP KRI++ LEHP+
Sbjct: 275 FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 113/300 (37%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 76
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------ 182
NI+ + E+ Q V++VMEL ++I ER +
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 183 ---ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 266 -------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L F + +P S S A+DL+ +ML DP KRI+ L+HP+I
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 46/295 (15%)
Query: 48 TPAAAPVSGLKQAVPRPDTNTILG-----KPYEDVKLHYSFGKELGRGQFGVTYLCTENS 102
T A ++ L P+ + T+ G +E + + +LG GQ+G Y
Sbjct: 181 TVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 240
Query: 103 TGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELC 162
A K++ + + + ++ +E +M+ + PN+V+ G + +++ E
Sbjct: 241 YSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFM 295
Query: 163 AGGELFD--------------------RIIAKGHYSERA-------AASICSKDENALLK 195
G L D +I + Y E+ AA C EN L+K
Sbjct: 296 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVK 355
Query: 196 ATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEIDIWSAGVILY-ILLSGV 250
DFGLS + G Y G+ + + APE L ++ + D+W+ GV+L+ I G+
Sbjct: 356 VADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 414
Query: 251 PPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQV 305
P+ +++ +L+ D E +L+R +P R + A++
Sbjct: 415 SPYPGIDLSQVYE-LLEKDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 121
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 239 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 298
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358
Query: 311 I 311
I
Sbjct: 359 I 359
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 46/295 (15%)
Query: 48 TPAAAPVSGLKQAVPRPDTNTILG-----KPYEDVKLHYSFGKELGRGQFGVTYLCTENS 102
T A ++ L P+ + T+ G +E + + +LG GQ+G Y
Sbjct: 223 TVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 282
Query: 103 TGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELC 162
A K++ + + + ++ +E +M+ + PN+V+ G + +++ E
Sbjct: 283 YSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFM 337
Query: 163 AGGELFD--------------------RIIAKGHYSERA-------AASICSKDENALLK 195
G L D +I + Y E+ AA C EN L+K
Sbjct: 338 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVK 397
Query: 196 ATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEIDIWSAGVILY-ILLSGV 250
DFGLS + G Y G+ + + APE L ++ + D+W+ GV+L+ I G+
Sbjct: 398 VADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 456
Query: 251 PPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQV 305
P+ +++ +L+ D E +L+R +P R + A++
Sbjct: 457 SPYPGIDLSQVYE-LLEKDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK DF L+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 121
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 239 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 298
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358
Query: 311 I 311
I
Sbjct: 359 I 359
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 46/210 (21%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G + TG FA K + + D RE ++++ L+ NIV+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 147 GAYEDKQSVH--VVMELCAGGELF----------------------DRIIAKGHYSERAA 182
E+ + H ++ME C G L+ D + H E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 183 AS----------ICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPE-----VLR 227
+ +D ++ K TDFG + +E+ + + + G+ Y+ P+ VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 228 R----RYGKEIDIWSAGVILYILLSGVPPF 253
+ +YG +D+WS GV Y +G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 84
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 202 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 261
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 262 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
Query: 311 I 311
I
Sbjct: 322 I 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 76
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313
Query: 311 I 311
I
Sbjct: 314 I 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 77
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 254
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 255 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314
Query: 311 I 311
I
Sbjct: 315 I 315
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 311 I 311
I
Sbjct: 321 I 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 84
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 202 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 261
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 262 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
Query: 311 I 311
I
Sbjct: 322 I 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 77
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 254
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 255 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314
Query: 311 I 311
I
Sbjct: 315 I 315
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 7 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 57
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 58 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 115
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 116 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 173
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 230
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 231 CPESLHDLMCQCWRKDPEERPT 252
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 52.0 bits (123), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 429 DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFC 487
+ L AF+ FD+D G IT+DEL AM G + + +I E D D DGR+NY+EF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 488 AMM 490
M+
Sbjct: 66 RML 68
Score = 45.1 bits (105), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 356 IQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF 415
++ L+ F D D G IT +EL+ +A LG L + E+ ++ ADVD +G ++Y EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ FDKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 487 CAMM 490
MM
Sbjct: 61 VQMM 64
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFI 416
+++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++Y EF+
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 46/210 (21%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG+G + TG FA K + + D RE ++++ L+ NIV+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 147 GAYEDKQSVH--VVMELCAGGELF----------------------DRIIAKGHYSERAA 182
E+ + H ++ME C G L+ D + H E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 183 AS----------ICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPE-----VLR 227
+ +D ++ K TDFG + +E+ + + + G+ Y+ P+ VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 228 R----RYGKEIDIWSAGVILYILLSGVPPF 253
+ +YG +D+WS GV Y +G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 82
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 143 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 200 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 259
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 260 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 319
Query: 311 I 311
I
Sbjct: 320 I 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 311 I 311
I
Sbjct: 321 I 321
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSER----- 180
G + ++++E G L D +I + Y E+
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 181 --AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 199 DVWAFGVLLWEIATYGMSPY 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK FGL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 45/272 (16%)
Query: 63 RPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND 122
+P T + +E + +LG+G FG ++ T N T R A K++ +
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----S 305
Query: 123 KDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI----------- 171
+ +E Q+M+ L + + + A ++ +++V E + G L D +
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 363
Query: 172 --------IAKGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDI 214
IA G Y ER AA+I EN + K DFGL+ IE+ + Y
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTAR 421
Query: 215 VGSAY---YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGD 269
G+ + + APE L R+ + D+WS G++L L + G P+ + + D + +G
Sbjct: 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG- 480
Query: 270 IDFESAPWPTISSSAKDLVRRMLTQDPKKRIT 301
+ P S DL+ + ++P++R T
Sbjct: 481 --YRMPCPPECPESLHDLMCQCWRKEPEERPT 510
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 5 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 55
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 56 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 114 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 171
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 228
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 229 CPESLHDLMCQCWRKDPEERPT 250
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 112/301 (37%), Gaps = 75/301 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y K +G G G+ + R A K +S R + RE+ +M+ ++ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHK- 83
Query: 141 NIVEFKGAY------EDKQSVHVVMELCAGGE----------------LFDRIIAKGHYS 178
NI+ + E+ Q V++VMEL L+ + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 179 ERAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRR 228
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 229 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 266 --------LQGDIDFESAPWPTIS-------SSAKDLVRRMLTQDPKKRITSAQVLEHPW 310
L F + +P S S A+DL+ +ML DP KRI+ L+HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 311 I 311
I
Sbjct: 321 I 321
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ FDKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 487 CAMM 490
MM
Sbjct: 64 VQMM 67
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 412 YIEFI 416
Y EF+
Sbjct: 60 YEEFV 64
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 116/299 (38%), Gaps = 71/299 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAA------------- 182
+ G N+ + + E+ Q V++VMEL ++I ER +
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 183 --ASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRY 230
A I +D + LK DFGL+ + V + YY APEV L Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 231 GKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FES 274
+ +DIWS G I+ ++ G F W + + + F LQ + E+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 275 AP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 84 GKELGRGQFGVTYLCTENSTGRQFACKSISKR-KLVTKNDKDDIKREIQIMQHLSGQPNI 142
G + G G FGV Y N+T A K ++ + T+ K +EI++ + N+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHE-NL 83
Query: 143 VEFKGAYEDKQSVHVVMELCAGGELFDRI----------------IAKG----------- 175
VE G D + +V G L DR+ IA+G
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 176 HYSER--AAASICSKDENALLKATDFGLSVFIE---EGKVYRDIVGSAYYVAPEVLRRRY 230
H+ R +A+I DE K +DFGL+ E + IVG+ Y APE LR
Sbjct: 144 HHIHRDIKSANIL-LDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI 202
Query: 231 GKEIDIWSAGVILYILLSGVP 251
+ DI+S GV+L +++G+P
Sbjct: 203 TPKSDIYSFGVVLLEIITGLP 223
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 362 MFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF--ITAT 419
+F ID + G ++YEE+KA +++ + E +Q + ++ D DGNG ID EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 420 MHRHKLERDDHLYKA-FQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDND 478
+ L D K ++ D D G +T +E+ K +G+ + + E + + D + D
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGD 121
Query: 479 GRINYDEFC 487
G I +EF
Sbjct: 122 GYITLEEFL 130
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 337 NKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQ 396
N+ K + ++LS ++I GLK ++ +D D G +T EE+ + + G E +
Sbjct: 56 NEFAKFYGSIQGQDLSDDKI-GLKVLYKLMDVDGDGKLTKEEVTSFFKKHG---IEKVAE 111
Query: 397 QLMEAADVDGNGTIDYIEFITATM 420
Q+M+ AD +G+G I EF+ ++
Sbjct: 112 QVMK-ADANGDGYITLEEFLEFSL 134
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 396 QQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAM 455
+ L + DV+G+G + Y E + ++ + L F+ D D +G ID+ E A
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNG--EIDQNEFA- 59
Query: 456 KDYG------MGDDDT-IKEIISEVDTDNDGRINYDEFCAMMR 491
K YG + DD +K + +D D DG++ +E + +
Sbjct: 60 KFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK 102
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + ++++E G L D +I + Y E+
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 194 DVWAFGVLLWEIATYGMSPY 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 147 GAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA----- 181
G + ++++E G L D +I + Y E+
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 182 --AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEID 235
AA C EN L+K DFGLS + G Y G+ + + APE L ++ + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 236 IWSAGVILY-ILLSGVPPF 253
+W+ GV+L+ I G+ P+
Sbjct: 195 VWAFGVLLWEIATYGMSPY 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK D GL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS ++Q LK+ FT ID D G I E+LK + LG + E+ +++ G +
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQL 65
Query: 411 DYIEFITATMHR-HKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEI 469
++ F+T + + +D L AF FD+D GFI D L+ +++ MGD+ + +EI
Sbjct: 66 NFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLEN--MGDNFSKEEI 123
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ + + + + A ++ +++V E + G L D + IA
Sbjct: 67 MKKIRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 362 MFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF--ITAT 419
+F ID + G ++YEE+KA +++ + E +Q + ++ D DGNG ID EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 420 MHRHKLERDDHLYKA-FQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDND 478
+ L D K ++ D D G +T +E+ K +G+ + + E + + D + D
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGD 121
Query: 479 GRINYDEFC 487
G I +EF
Sbjct: 122 GYITLEEFL 130
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 337 NKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQ 396
N+ K + ++LS ++I GLK ++ +D D G +T EE+ + + G E +
Sbjct: 56 NEFAKFYGSIQGQDLSDDKI-GLKVLYKLMDVDGDGKLTKEEVTSFFKKHG---IEKVAE 111
Query: 397 QLMEAADVDGNGTIDYIEFITATM 420
Q+M+ AD +G+G I EF+ ++
Sbjct: 112 QVMK-ADANGDGYITLEEFLEFSL 134
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 396 QQLMEAADVDGNGTIDYIEFITATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAM 455
+ L + DV+G+G + Y E + ++ + L F+ D D +G ID+ E A
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNG--EIDQNEFA- 59
Query: 456 KDYG------MGDDDT-IKEIISEVDTDNDGRINYDEFCAMMR 491
K YG + DD +K + +D D DG++ +E + +
Sbjct: 60 KFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK 102
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ FDKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 487 CAMM 490
MM
Sbjct: 68 VQMM 71
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++
Sbjct: 7 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 412 YIEFI 416
Y EF+
Sbjct: 64 YEEFV 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ FDKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 487 CAMM 490
MM
Sbjct: 67 VQMM 70
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++
Sbjct: 6 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 412 YIEFI 416
Y EF+
Sbjct: 63 YEEFV 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ FDKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 487 CAMM 490
MM
Sbjct: 64 VQMM 67
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 412 YIEFI 416
Y EF+
Sbjct: 60 YEEFV 64
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 45/272 (16%)
Query: 63 RPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND 122
+P T + +E + +LG+G FG ++ T N T R A K++ +
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----S 222
Query: 123 KDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI----------- 171
+ +E Q+M+ L + + + A ++ +++V E + G L D +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 172 --------IAKGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDI 214
IA G Y ER AA+I EN + K DFGL+ IE+ + Y
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTAR 338
Query: 215 VGSAY---YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGD 269
G+ + + APE L R+ + D+WS G++L L + G P+ + + D + +G
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG- 397
Query: 270 IDFESAPWPTISSSAKDLVRRMLTQDPKKRIT 301
+ P S DL+ + ++P++R T
Sbjct: 398 --YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 34/149 (22%)
Query: 194 LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGVPP 252
+K DFGL+ +V + +Y APEVL + Y +D+WS G I + P
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
Query: 253 FWAETEKG----IFDAI-LQGDIDFESAPWPT-----------------------ISSSA 284
F ++ I D I L G+ D WP I
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEED-----WPRDVALPRQAFHSKSAQPIEKFVTDIDELG 273
Query: 285 KDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
KDL+ + LT +P KRI++ L HP+ ++
Sbjct: 274 KDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ FDKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 487 CAMM 490
MM
Sbjct: 65 VQMM 68
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++
Sbjct: 4 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 412 YIEFI 416
Y EF+
Sbjct: 61 YEEFV 65
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 45/272 (16%)
Query: 63 RPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND 122
+P T + +E + +LG+G FG ++ T N T R A K++ +
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----S 222
Query: 123 KDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI----------- 171
+ +E Q+M+ L + + + A ++ +++V E + G L D +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 172 --------IAKGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDI 214
IA G Y ER AA+I EN + K DFGL+ IE+ + Y
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTAR 338
Query: 215 VGSAY---YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGD 269
G+ + + APE L R+ + D+WS G++L L + G P+ + + D + +G
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG- 397
Query: 270 IDFESAPWPTISSSAKDLVRRMLTQDPKKRIT 301
+ P S DL+ + ++P++R T
Sbjct: 398 --YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 78
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 198 DVWAFGVLLWEIATYGMSPY 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 199 DVWAFGVLLWEIATYGMSPY 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK D GL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 196 DVWAFGVLLWEIATYGMSPY 215
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 199 DVWAFGVLLWEIATYGMSPY 218
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPI-DSAVLS 328
S +S A D + ++L D + R+T+ + +EHP+ + +P D+AVLS
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQSQPCADNAVLS 342
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 75
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 195 DVWAFGVLLWEIATYGMSPY 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 42/266 (15%)
Query: 83 FGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNI 142
F E+GRG F Y + T + A + RKL TK+++ K E + ++ L PNI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGLQ-HPNI 87
Query: 143 VEFKGAYED----KQSVHVVMELCAGGEL-----------------FDRIIAKG-HYSER 180
V F ++E K+ + +V EL G L + R I KG +
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 181 AAASICSKD---ENALL-------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRY 230
I +D +N + K D GL+ ++ + ++G+ + APE +Y
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 231 GKEIDIWSAG-VILYILLSGVPPFWAETEKGIFDAILQG--DIDFESAPWPTISSSAKDL 287
+ +D+++ G L S P + I+ + G F+ P + K++
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV----KEI 262
Query: 288 VRRMLTQDPKKRITSAQVLEHPWIKE 313
+ + Q+ +R + +L H + +E
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 64/312 (20%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + TG + A K +S R + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 IQIMQHLSGQPNIVEFKGAY------EDKQSVHVVMELCAGGELFDRIIAKGHYSERA-- 181
+++++H+ + N++ + E+ V++V L G +L + + + +
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 182 -------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAY 219
+A I +D E+ LK D GL+ ++ V + +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT--GYVATRW 187
Query: 220 YVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ---------- 267
Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 268 GDIDFESA--------PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPW 310
I ESA P ++ + A DL+ +ML D KRIT+AQ L H +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 311 IKEGGEASDKPI 322
+ + D+P+
Sbjct: 308 FAQYHDPDDEPV 319
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 199 DVWAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 196 DVWAFGVLLWEIATYGMSPY 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 34/149 (22%)
Query: 194 LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGVPP 252
+K DFGL+ +V + +Y APEVL + Y +D+WS G I + P
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
Query: 253 FWAETEKG----IFDAI-LQGDIDFESAPWPT-----------------------ISSSA 284
F ++ I D I L G+ D WP I
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEED-----WPRDVALPRQAFHSKSAQPIEKFVTDIDELG 273
Query: 285 KDLVRRMLTQDPKKRITSAQVLEHPWIKE 313
KDL+ + LT +P KRI++ L HP+ ++
Sbjct: 274 KDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 80
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + Y VGS + + PEVL ++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 88
Query: 147 GAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA----- 181
G + +++ E G L D +I + Y E+
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 182 --AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEID 235
AA C EN L+K DFGLS + G Y G+ + + APE L ++ + D
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 236 IWSAGVILY-ILLSGVPPF 253
+W+ GV+L+ I G+ P+
Sbjct: 208 VWAFGVLLWEIATYGMSPY 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 196 DVWAFGVLLWEIATYGMSPY 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 147 GAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA----- 181
G + +++ E G L D +I + Y E+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 182 --AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEID 235
AA C EN L+K DFGLS + G Y G+ + + APE L ++ + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 236 IWSAGVILY-ILLSGVPPF 253
+W+ GV+L+ I G+ P+
Sbjct: 195 VWAFGVLLWEIATYGMSPY 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 250 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 305
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + +++ E G L D +I + Y E+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 194 DVWAFGVLLWEIATYGMSPY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSER----- 180
G + +++ E G L D +I + Y E+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 181 --AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 194 DVWAFGVLLWEIATYGMSPY 213
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 118/308 (38%), Gaps = 73/308 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS G I+ ++ G F W + + + F LQ + E
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 312 KEGGEASD 319
+ S+
Sbjct: 322 NVWYDPSE 329
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSER----- 180
G + +++ E G L D +I + Y E+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 181 --AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G Y G+ + + APE L ++ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 194 DVWAFGVLLWEIATYGMSPY 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 145
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 146 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS G I+ ++ G F W + + + F LQ + E
Sbjct: 204 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 263
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 264 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 58/253 (22%)
Query: 61 VPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRK 116
VPR T T+ E + S K +G G+FG E +GR + K S++ +
Sbjct: 15 VPRGSTQTVHEFAKELDATNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKT 68
Query: 117 L---VTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------ 167
L T+ + D E IM PNI+ +G + V +V E G L
Sbjct: 69 LKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 127
Query: 168 ------------FDRIIAKGH-------YSER-AAASICSKDENALLKATDFGLSVFIEE 207
R IA G Y R AA + N + K +DFGLS +E+
Sbjct: 128 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
Query: 208 ----------GKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWA 255
GK+ + +PE + R++ D+WS G++L+ ++S G P+W
Sbjct: 188 DPEAAYTTRGGKI------PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
Query: 256 ETEKGIFDAILQG 268
+ + + A+ +G
Sbjct: 242 MSNQDVIKAVDEG 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 60
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + Y VGS + + PEVL ++
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 144
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 145 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS G I+ ++ G F W + + + F LQ + E
Sbjct: 203 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 262
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 263 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 250 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 305
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS G I+ ++ G F W + + + F LQ + E
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 250 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 305
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 16 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 66
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V+E + G L D + IA
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + G+ + +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWT 182
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 239
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + +DP++R T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPT 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGRQF-ACKSISKRKLVTKNDKDDIKREIQIMQHLSG 138
H + +LG+G FG LC + G A ++ + + + + D +REIQI++ L
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 139 QPNIVEFKGAY--EDKQSVHVVMELCAGGELFDRI------------------IAKGH-- 176
IV+++G + + +VME G L D + I KG
Sbjct: 68 D-FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 177 -------YSERAAASICSKDENALLKATDFGLSVFI---EEGKVYRDIVGSA-YYVAPEV 225
+ + AA +I + E A +K DFGL+ + ++ V R+ S ++ APE
Sbjct: 127 LGSRRCVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 226 LRRR-YGKEIDIWSAGVILYILLS 248
L + ++ D+WS GV+LY L +
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 43/262 (16%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELGRG +GV +G+ A K I R V ++ + ++ I P V F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 146 KGAYEDKQSVHVVMEL--CAGGELFDRIIAKGHYSE-----RAAASICSKDE-------- 190
GA + V + MEL + + + ++I KG + A SI E
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 191 ------------NAL--LKATDFGLSVFIEEGKVYRDI-VGSAYYVAPEVL-----RRRY 230
NAL +K DFG+S ++ + V +DI G Y+APE + ++ Y
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVD-DVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 231 GKEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQGDIDFESAPWPTISSSAKDLV 288
+ DIWS G+ + L P+ W + + + + P S+ D
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVDFT 247
Query: 289 RRMLTQDPKKRITSAQVLEHPW 310
+ L ++ K+R T ++++HP+
Sbjct: 248 SQCLKKNSKERPTYPELMQHPF 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 9 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 59
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E + G L D + IA
Sbjct: 60 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 117
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 118 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 175
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 232
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + ++P++R T
Sbjct: 233 CPESLHDLMCQCWRKEPEERPT 254
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 202
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 203 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 258
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 259 KRDPKQRISIPELLAHPYVQ 278
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 64
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + Y VGS + + PEVL ++
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 45/272 (16%)
Query: 63 RPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKND 122
+P T + +E + +LG+G FG ++ T N T R A K++ +
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----S 222
Query: 123 KDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI----------- 171
+ +E Q+M+ L + + + A ++ +++V E + G L D +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLP 280
Query: 172 --------IAKGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDI 214
IA G Y ER AA+I EN + K DFGL+ IE+ + Y
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTAR 338
Query: 215 VGSAY---YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGD 269
G+ + + APE L R+ + D+WS G++L L + G P+ + + D + +G
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG- 397
Query: 270 IDFESAPWPTISSSAKDLVRRMLTQDPKKRIT 301
+ P S DL+ + ++P++R T
Sbjct: 398 --YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 65
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + Y VGS + + PEVL ++
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 109/286 (38%), Gaps = 73/286 (25%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ------- 139
LG+G FG R +A K I T+ I E+ ++ L+ Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 140 -----PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER------------AA 182
N V+ A + K ++ + ME C G L+D I ++ +R A
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 183 ASICSK--------------DENALLKATDFGLSVFIEEGKVYRDI-------------- 214
+ I S+ DE+ +K DFGL+ V+R +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLPGSS 184
Query: 215 ------VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAI 265
+G+A YVA EVL Y ++ID++S G+I + + + PF E+ I +
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKL 241
Query: 266 LQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
I+F K ++R ++ DP KR + +L W+
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 116/308 (37%), Gaps = 73/308 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +DIWS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVE 261
Query: 266 ------------LQGDIDF--ESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L D+ F +S +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 312 KEGGEASD 319
+ S+
Sbjct: 322 NVWYDPSE 329
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 120/326 (36%), Gaps = 104/326 (31%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTG-RQFACKSISKRKLVTKNDK--DDIKREIQIMQHL- 136
Y LG G FG C ++ G R A K +V D+ + + EIQ+++HL
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVK------IVKNVDRYCEAARSEIQVLEHLN 69
Query: 137 SGQPN----IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH------YSERAAASIC 186
+ PN V+ +E + +V EL G +D I G + + A IC
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 187 S---------------KDENAL-------------------------LKATDFGLSVFIE 206
K EN L +K DFG + + +
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 207 EGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVIL---YILLSGVPPFWAETEKGIF 262
E + +V + +Y APEV L + + D+WS G IL Y+ + P ++ +
Sbjct: 189 EH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 263 DAIL--------------------QGDIDFESAPWPTISSSAK----------------- 285
+ IL + D D S+ +S + K
Sbjct: 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306
Query: 286 DLVRRMLTQDPKKRITSAQVLEHPWI 311
DL+++ML DP KRIT + L+HP+
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 71
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + Y VGS + + PEVL ++
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 104/262 (39%), Gaps = 41/262 (15%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELGRG +GV +G+ A K I R V ++ + ++ I P V F
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 146 KGAYEDKQSVHVVMEL--CAGGELFDRIIAKGHYSE-----RAAASICSKDE-------- 190
GA + V + MEL + + + ++I KG + A SI E
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 191 ------------NAL--LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-----RRRYG 231
NAL +K DFG+S ++ + G Y+APE + ++ Y
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 232 KEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVR 289
+ DIWS G+ + L P+ W + + + + P S+ D
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVDFTS 292
Query: 290 RMLTQDPKKRITSAQVLEHPWI 311
+ L ++ K+R T ++++HP+
Sbjct: 293 QCLKKNSKERPTYPELMQHPFF 314
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 64/294 (21%)
Query: 62 PRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN 121
P P +L + D+K F +G G FG G + ++ +K+
Sbjct: 14 PDPTIYPVLD--WNDIK----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD 67
Query: 122 DKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------- 171
D D E++++ L PNI+ GA E + +++ +E G L D +
Sbjct: 68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 172 -----------------------IAKG--HYSERA------AASICSKDENALLKATDFG 200
+A+G + S++ AA EN + K DFG
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 187
Query: 201 LS----VFIEE--GKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPP 252
LS V++++ G++ ++A E L Y D+WS GV+L+ ++S G P
Sbjct: 188 LSRGQEVYVKKTMGRL------PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 253 FWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVL 306
+ T +++ + QG + DL+R+ + P +R + AQ+L
Sbjct: 242 YCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
ELG G GV +G A K I + ++ I RE+Q++ H P IV F
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 79
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRI------------------IAKGHYSERAAASICS 187
GA+ + + ME GG L D++ + +G R I
Sbjct: 80 YGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMH 138
Query: 188 KD---ENAL------LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIW 237
+D N L +K DFG+S + + + VG+ Y+APE L+ Y + DIW
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMAPERLQGTHYSVQSDIW 197
Query: 238 SAGVILYILLSG---VPPFWAETEKGIF 262
S G+ L L G +PP A+ + IF
Sbjct: 198 SMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 103/285 (36%), Gaps = 59/285 (20%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIK--REIQIMQHLSG--QPN 141
E+G G +G Y + +G A KS+ I RE+ +++ L PN
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 142 IVEFKGAYEDKQS-----VHVVMELCAGG--ELFDRIIAKGHYSERA------------- 181
+V ++ V +V E D+ G +E
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 182 --AASICSKD---ENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
A I +D EN L+ K DFGL+ +V + +Y APEV L+
Sbjct: 136 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST 195
Query: 230 YGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAI-------LQGDIDFESAPWP 278
Y +D+WS G I + P F +E IFD I D+ +P
Sbjct: 196 YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFP 255
Query: 279 T------------ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S L+ MLT +P KRI++ + L+H ++
Sbjct: 256 PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 34/148 (22%)
Query: 194 LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGVPP 252
+K DFGL+ +V + +Y APEVL + Y +D+WS G I + P
Sbjct: 159 IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
Query: 253 FWAETEKG----IFDAI-LQGDIDFESAPWPT-----------------------ISSSA 284
F ++ I D I L G+ D WP I
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEED-----WPRDVALPRQAFHSKSAQPIEKFVTDIDELG 273
Query: 285 KDLVRRMLTQDPKKRITSAQVLEHPWIK 312
KDL+ + LT +P KRI++ L HP+ +
Sbjct: 274 KDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 64/294 (21%)
Query: 62 PRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN 121
P P +L + D+K F +G G FG G + ++ +K+
Sbjct: 4 PDPTIYPVLD--WNDIK----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD 57
Query: 122 DKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------- 171
D D E++++ L PNI+ GA E + +++ +E G L D +
Sbjct: 58 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 172 -----------------------IAKG--HYSERA------AASICSKDENALLKATDFG 200
+A+G + S++ AA EN + K DFG
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 177
Query: 201 LS----VFIEE--GKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPP 252
LS V++++ G++ ++A E L Y D+WS GV+L+ ++S G P
Sbjct: 178 LSRGQEVYVKKTMGRL------PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
Query: 253 FWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVL 306
+ T +++ + QG + DL+R+ + P +R + AQ+L
Sbjct: 232 YCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 146 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 205
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 206 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 261
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 262 KRDPKQRISIPELLAHPYVQ 281
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E+ Q +K+ F DT+ +G+I Y ELK + LG + + E+ +LM D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 411 DYIEFITATMHRHK 424
+ +F+ + K
Sbjct: 61 GFDDFLDIMTEKIK 74
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 426 ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYD 484
E+ + +AF FD + +G I EL++AM+ G I E+++E D + +G I +D
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 485 EFCAMM 490
+F +M
Sbjct: 64 DFLDIM 69
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 118/308 (38%), Gaps = 73/308 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQGDID--FE 273
Y + +DIWS G I+ ++ G F W + + + F LQ + E
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 274 SAP----------WPTI------------SSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ P +P + +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 312 KEGGEASD 319
+ S+
Sbjct: 322 NVWYDPSE 329
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 188 KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAG 240
K EN L+ K DFGL+ +V + +Y APEV L+ Y +D+WS G
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 241 VILYILLSGVPPFWAETEKG----IFDAI-------LQGDIDFESAPWPT---------- 279
I + P F +E IFD I D+ +P
Sbjct: 199 CIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVV 258
Query: 280 --ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S L+ MLT +P KRI++ + L+H ++
Sbjct: 259 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 162 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 222 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 277
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 13 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 63
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E G L D + IA
Sbjct: 64 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 121
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + Y G+ + +
Sbjct: 122 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWT 179
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 236
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + ++P++R T
Sbjct: 237 CPESLHDLMCQCWRKEPEERPT 258
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 142 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 201
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 202 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 257
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 258 KRDPKQRISIPELLAHPYVQ 277
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 64/294 (21%)
Query: 62 PRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKN 121
P P +L + D+K F +G G FG G + ++ +K+
Sbjct: 11 PDPTIYPVLD--WNDIK----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD 64
Query: 122 DKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI---------- 171
D D E++++ L PNI+ GA E + +++ +E G L D +
Sbjct: 65 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 124
Query: 172 -----------------------IAKG--HYSERA------AASICSKDENALLKATDFG 200
+A+G + S++ AA EN + K DFG
Sbjct: 125 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFG 184
Query: 201 LS----VFIEE--GKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPP 252
LS V++++ G++ ++A E L Y D+WS GV+L+ ++S G P
Sbjct: 185 LSRGQEVYVKKTMGRL------PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
Query: 253 FWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVL 306
+ T +++ + QG + DL+R+ + P +R + AQ+L
Sbjct: 239 YCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 191 NALLKATDFGLSVFIE--EGKVYRDI-VGSAYYVAPEVLR-----RRYGKEI-------D 235
+ +LK DFG++ ++ V +D VG+ Y+ PE ++ R GK D
Sbjct: 162 DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 236 IWSAGVILYILLSGVPPFWAETEK-GIFDAIL--QGDIDFESAPWPTISSSAKDLVRRML 292
+WS G ILY + G PF + AI+ +I+F P +D+++ L
Sbjct: 222 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCL 277
Query: 293 TQDPKKRITSAQVLEHPWIK 312
+DPK+RI+ ++L HP+++
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 60/227 (26%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTY---LCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
P+E V H + +G+G FGV Y + Q A KS+S+ + + RE
Sbjct: 17 PHERVVTHSD--RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLRE 72
Query: 130 IQIMQHLSGQPNIVEFKGAYEDKQSV-HVVMELCAGGELFDRI----------------- 171
+M+ L+ PN++ G + + HV++ G+L I
Sbjct: 73 GLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 172 -IAKG--HYSER------AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-- 220
+A+G + +E+ AA C DE+ +K DFGL+ RDI+ YY
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA---------RDILDREYYSV 182
Query: 221 ------------VAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPF 253
A E L+ R+ + D+WS GV+L+ LL+ G PP+
Sbjct: 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 132 IMQHLSGQP--NIVEFKGAYEDKQSVHVVMELCAGGELFDR--IIAKGHYSERAAASICS 187
+M+++ G +IV +G K+++ V+ + C + II + + A+I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGII----HRDVKPANIMI 149
Query: 188 KDENALLKATDFGLSVFIEEG----KVYRDIVGSAYYVAPEVLRRRYGKEID----IWSA 239
NA+ K DFG++ I + ++G+A Y++PE R G +D ++S
Sbjct: 150 SATNAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSL 205
Query: 240 GVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKR 299
G +LY +L+G PPF ++ + ++ D SA +S+ +V + L ++P+ R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 300 ITSAQVLEHPWIK-EGGEASDKP 321
+A + ++ GE + P
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 61/281 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKDDIKREIQIMQHLSG 138
SFGK LG G FG T + A +++ + L +++ + E++++ +L
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK------------------------ 174
NIV GA V+ E C G+L + + K
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 175 -----GHYSERAAASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
+ + A + SK+ N LL K DFGL+ I+ Y +
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV-VK 227
Query: 216 GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF-WAETEKGIFDAILQG 268
G+A ++APE + Y E D+WS G+ L+ L S G P+ + + I +G
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 269 --DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
+ E AP + D+++ DP KR T Q+++
Sbjct: 288 FRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 188 KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAG 240
K EN L+ K DFGL+ +V + +Y APEV L+ Y +D+WS G
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 241 VILYILLSGVPPFWAETEKG----IFDAI-------LQGDIDFESAPWPT---------- 279
I + P F +E IFD I D+ +P
Sbjct: 199 CIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVV 258
Query: 280 --ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S L+ MLT +P KRI++ + L+H ++
Sbjct: 259 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 188 KDENALL------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAG 240
K EN L+ K DFGL+ +V + +Y APEV L+ Y +D+WS G
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 241 VILYILLSGVPPFWAETEKG----IFDAI-------LQGDIDFESAPWPT---------- 279
I + P F +E IFD I D+ +P
Sbjct: 199 CIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVV 258
Query: 280 --ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+ S L+ MLT +P KRI++ + L+H ++
Sbjct: 259 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++ F D D +G I+ EL+ + LG KLT+ EV +++ AD+DG+G ++
Sbjct: 27 SEEEI---REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 83
Query: 412 YIEFI 416
Y EF+
Sbjct: 84 YEEFV 88
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 428 DDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEF 486
++ + +AF+ DKD +G+I+ EL M + G D+ + E+I E D D DG++NY+EF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 487 CAMM 490
MM
Sbjct: 88 VQMM 91
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 41/251 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 147 GAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA----- 181
G + +++ E G L D +I + Y E+
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 182 --AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEID 235
AA C EN L+K DFGLS + G + G+ + + APE L ++ + D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 236 IWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
+W+ GV+L+ I G+ P+ +++ +L+ D E +L+R
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERP--EGCPEKVYELMRACWQW 249
Query: 295 DPKKRITSAQV 305
+P R + A++
Sbjct: 250 NPSDRPSFAEI 260
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 74/316 (23%)
Query: 70 LGKPYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKRE 129
L K +V Y +G G +G + +G + A K +S R + RE
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRE 100
Query: 130 IQIMQHLS-----GQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA--- 181
+++++H+ G ++ + E+ V++V L G +L + + + +
Sbjct: 101 LRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFL 159
Query: 182 ------------AASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYY 220
+A I +D E+ LK DFGL+ ++ V + +Y
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWY 217
Query: 221 VAPEVLRR--RYGKEIDIWSAGVILYIL---------------------LSGVPP----- 252
APE++ Y +DIWS G I+ L L+G PP
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVIS 277
Query: 253 -FWAETEKGIFDAILQ------GDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQV 305
+ + +++ Q D+ + P A DL+ +ML D KRIT+++
Sbjct: 278 RMPSHEARNYINSLPQMPKRNFADVFIGANPL------AVDLLEKMLVLDTDKRITASEA 331
Query: 306 LEHPWIKEGGEASDKP 321
L HP+ + + D+P
Sbjct: 332 LAHPYFSQYHDPDDEP 347
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 132 IMQHLSGQP--NIVEFKGAYEDKQSVHVVMELCAGGELFDR--IIAKGHYSERAAASICS 187
+M+++ G +IV +G K+++ V+ + C + II + + A+I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGII----HRDVKPANILI 149
Query: 188 KDENALLKATDFGLSVFIEEG----KVYRDIVGSAYYVAPEVLRRRYGKEID----IWSA 239
NA+ K DFG++ I + ++G+A Y++PE R G +D ++S
Sbjct: 150 SATNAV-KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSL 205
Query: 240 GVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKR 299
G +LY +L+G PPF ++ + ++ D SA +S+ +V + L ++P+ R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 300 ITSAQVLEHPWIK-EGGEASDKP 321
+A + ++ GE + P
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y+ A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 93
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSER----- 180
G + ++V E G L D +I + Y E+
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 181 --AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN ++K DFGLS + G Y G+ + + APE L + +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 235 DIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG 268
D+W+ GV+L+ I G+ P+ ++D + +G
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG 247
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 363 FTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHR 422
F D +++G ++ +L+ L LG KLT+AEV +L++ +VD NG IDY +FI + +
Sbjct: 11 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLRQ 70
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 427 RDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGD---DDTIKEIISEVDTDNDGRINY 483
+ + KAFQ FDK+++G +++ +L + G+G+ D + E++ V+ D++G I+Y
Sbjct: 3 KTEDFVKAFQVFDKESTGKVSVGDLRYMLT--GLGEKLTDAEVDELLKGVEVDSNGEIDY 60
Query: 484 DEFC 487
+F
Sbjct: 61 KKFI 64
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCA 488
L F+ FDK+ G+I +DEL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 489 MMR 491
M+
Sbjct: 67 FMK 69
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +MF D + G I +ELK L G +TE ++++LM+ D + +G ID
Sbjct: 4 SEEELSDLFRMF---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 412 YIEFI 416
Y EF+
Sbjct: 61 YDEFL 65
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 429 DHLYKAFQHFDKDNSGFITIDELEIAMKDYG-MGDDDTIKEIISEVDTDNDGRINYDEFC 487
+ + +AF+ FD+D +GFI+ EL AM+ G M ++ ++ II +D D DG+++++EF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 488 AMM 490
++
Sbjct: 96 TLL 98
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 321 PIDSAVLSRMKQFRAMNKLKKLALKVIAENLSTEEIQGLKQMFTNIDTDNSGTITYEELK 380
P+ +A++ +R + + L + ++ +E++ +++ F D D +G I+ +EL
Sbjct: 5 PVTAALM-----YRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELG 59
Query: 381 AGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
+ LG E E++ +++ D+DG+G +D+ EF+T
Sbjct: 60 TAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVT 96
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 132 IMQHLSGQP--NIVEFKGAYEDKQSVHVVMELCAGGELFDR--IIAKGHYSERAAASICS 187
+M+++ G +IV +G K+++ V+ + C + II + + A+I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGII----HRDVKPANIMI 149
Query: 188 KDENALLKATDFGLSVFIEEG----KVYRDIVGSAYYVAPEVLRRRYGKEID----IWSA 239
NA+ K DFG++ I + ++G+A Y++PE R G +D ++S
Sbjct: 150 SATNAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSL 205
Query: 240 GVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKR 299
G +LY +L+G PPF ++ + ++ D SA +S+ +V + L ++P+ R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 300 ITSAQVLEHPWIK-EGGEASDKP 321
+A + ++ GE + P
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENALLKATDFG 200
NIV+ + A D+ +V +L G I + G S + +E++ L+ DFG
Sbjct: 121 NIVKCQ-ALSDEHVQFLVYQLLRG---LKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 201 LSVFIEEGKVYRDIVGSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF----W 254
L+ +E V + +Y APE++ Y + +DIWS G I+ LL G F +
Sbjct: 177 LARQADEEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 255 AETEKGIFDAI------LQGDIDFESA--------PWPTISSS---------AKDLVRRM 291
+ K I + + + I E A P P S A DL+ RM
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRM 294
Query: 292 LTQDPKKRITSAQVLEHPWIKEGGEASDKP 321
L D +R+++A+ L H + + + D+P
Sbjct: 295 LVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
+ T+ + +++ F D D +G I+ +L+ + LG KLT+ EV +++ AD+DG+G +
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 411 DYIEFI 416
+Y +F+
Sbjct: 61 NYEDFV 66
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCA 488
+ +AF+ FDKD +G+I+ +L M + G D+ + E+I E D D DG++NY++F
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Query: 489 MM 490
MM
Sbjct: 68 MM 69
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
LG GQFG Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 147 GAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA----- 181
G + +++ E G L D +I + Y E+
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 182 --AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEID 235
AA C EN L+K DFGLS + G G+ + + APE L ++ + D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 236 IWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQ 294
+W+ GV+L+ I G+ P+ +++ +L+ D E +L+R
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERP--EGCPEKVYELMRACWQW 249
Query: 295 DPKKRITSAQV 305
+P R + A++
Sbjct: 250 NPSDRPSFAEI 260
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 42/279 (15%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQP 140
Y G+ LG G +L + R A K + + +RE Q L+ P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 72
Query: 141 NIVEFKGAYEDKQSV----HVVMELCAGGELFDRIIAKGHYSERAAASICS--------- 187
IV E + ++VME G L D + +G + + A + +
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 188 ----------KDENALLKAT------DFGLSVFIEEG----KVYRDIVGSAYYVAPEVLR 227
K N ++ AT DFG++ I + ++G+A Y++PE R
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 228 RRYGKEID----IWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSS 283
G +D ++S G +LY +L+G PPF ++ + ++ D SA +S+
Sbjct: 193 ---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 284 AKDLVRRMLTQDPKKRITSAQVLEHPWIK-EGGEASDKP 321
+V + L ++P+ R +A + ++ GE + P
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 119/326 (36%), Gaps = 104/326 (31%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTG-RQFACKSISKRKLVTKNDK--DDIKREIQIMQHL- 136
Y LG G FG C ++ G R A K +V D+ + + EIQ+++HL
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVK------IVKNVDRYCEAARSEIQVLEHLN 69
Query: 137 SGQPN----IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH------YSERAAASIC 186
+ PN V+ +E + +V EL G +D I G + + A IC
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 187 S---------------KDENAL-------------------------LKATDFGLSVFIE 206
K EN L +K DFG + + +
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 207 EGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVIL---YILLSGVPPFWAETEKGIF 262
E + +V +Y APEV L + + D+WS G IL Y+ + P ++ +
Sbjct: 189 EH--HSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 263 DAIL--------------------QGDIDFESAPWPTISSSAK----------------- 285
+ IL + D D S+ +S + K
Sbjct: 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306
Query: 286 DLVRRMLTQDPKKRITSAQVLEHPWI 311
DL+++ML DP KRIT + L+HP+
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 73/308 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 137
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 138 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +D+WS G I+ IL G P F + + + +
Sbjct: 196 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 255
Query: 266 ------------LQGDIDF--ESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L D+ F +S +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 256 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
Query: 312 KEGGEASD 319
+ S+
Sbjct: 316 NVWYDPSE 323
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 132 IMQHLSGQP--NIVEFKGAYEDKQSVHVVMELCAGGELFDR--IIAKGHYSERAAASICS 187
+M+++ G +IV +G K+++ V+ + C + II + + A+I
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGII----HRDVKPANIMI 149
Query: 188 KDENALLKATDFGLSVFIEEG----KVYRDIVGSAYYVAPEVLRRRYGKEID----IWSA 239
NA+ K DFG++ I + ++G+A Y++PE R G +D ++S
Sbjct: 150 SATNAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSL 205
Query: 240 GVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKR 299
G +LY +L+G PPF ++ + ++ D SA +S+ +V + L ++P+ R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 300 ITSAQVLEHPWIK-EGGEASDKP 321
+A + ++ GE + P
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 62/295 (21%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLS-----GQ 139
+ +G G +G + ++ A K +S R + RE+++++HL G
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERA---------------AAS 184
++ + ED V++V L G +L + + ++ E +A
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 185 ICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RYGKE 233
I +D E++ L+ DFGL+ +E V + +Y APE++ Y +
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIMLNWMHYNQT 209
Query: 234 IDIWSAGVILYILLSGVPPF----WAETEKGIFDAI------LQGDIDFESA-------- 275
+DIWS G I+ LL G F + + K I + + + I E A
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 276 PWPTISSS---------AKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKP 321
P P S A DL+ RML D +R+++A+ L H + + + D+P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 73/308 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 148
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 149 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +D+WS G I+ IL G P F + + + +
Sbjct: 207 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 266
Query: 266 ------------LQGDIDF--ESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L D+ F +S +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 267 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
Query: 312 KEGGEASD 319
+ S+
Sbjct: 327 NVWYDPSE 334
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 426 ERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYD 484
E+ + +AF FD D +G I + EL++AM+ G + IK++ISE+D + G++N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 485 EFCAMM 490
+F +M
Sbjct: 88 DFLTVM 93
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
L+ E+ Q +++ F D D +GTI +ELK + LG + + E+++++ D +G G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 411 DYIEFITATMHR 422
++ +F+T +
Sbjct: 85 NFGDFLTVMTQK 96
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 189 DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RYGKEIDIWSAGVILYIL 246
+E+ LK DFGL+ + V + +Y APEV+ Y + +DIWS G I+ +
Sbjct: 178 NEDCELKILDFGLARHADAEMT--GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 247 LSGVPPFWAETEKGIFDAILQ-----------------GDIDFESAP----------WPT 279
L+G F + IL+ +S P +P
Sbjct: 236 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 295
Query: 280 ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 312
S A DL+ +ML D KR+T+AQ L HP+ +
Sbjct: 296 ASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 189 DENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRR--RYGKEIDIWSAGVILYIL 246
+E+ LK DFGL+ + V + +Y APEV+ Y + +DIWS G I+ +
Sbjct: 160 NEDCELKILDFGLARHADAEMT--GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
Query: 247 LSGVPPFWAETEKGIFDAILQ-----------------GDIDFESAP----------WPT 279
L+G F + IL+ +S P +P
Sbjct: 218 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 277
Query: 280 ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK-----EGGEASDKPIDSAV 326
S A DL+ +ML D KR+T+AQ L HP+ + E + +P D ++
Sbjct: 278 ASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSL 329
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 128/336 (38%), Gaps = 84/336 (25%)
Query: 46 GPTPAAAPVSGLKQAVPRPDTNTILGKPYEDVKLH---------YSFGKELGRGQFGVTY 96
GP P+ A V D NT + Y D + H Y ++LGRG++ +
Sbjct: 3 GPVPSRARVYT--------DVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVF 54
Query: 97 LCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYED--KQS 154
+ + A K + K KREI+I+++L G PNI+ +D ++
Sbjct: 55 EAINITNNEKVAVKILKPVKKKKI------KREIKILENLRGGPNIITLADIVKDPVSRT 108
Query: 155 VHVVMELCAGGE-------LFDRIIAKGHYSERAAASICS---------KDENAL----- 193
+V E + L D I Y A C K N L
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEH 168
Query: 194 --LKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSG 249
L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 169 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 250 VPPFWAETE--------------KGIFDAILQGDIDFE--------------------SA 275
PF+ + + ++D I + +I+ + S
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 276 PWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
+S A D + ++L D + R+T+ + +EHP+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 86 ELGRGQFGVTYL--CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIV 143
ELG G FG +L C + ++ K +++ + D +RE +++ L Q +IV
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 106
Query: 144 EFKGAYEDKQSVHVVME-------------------LCAGGE-------------LFDRI 171
F G + + + +V E L AGGE
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 172 IAKG-------HYSERAAASI-CSKDENALLKATDFGLSVFIEEGKVYRDIVGS-----A 218
+A G H+ R A+ C + ++K DFG+S I YR VG
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPI 224
Query: 219 YYVAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-DIDFESA 275
++ PE +L R++ E D+WS GV+L+ I G P++ + D I QG +++ A
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 284
Query: 276 PWPTISSSAKDLVRRMLTQDPKKR 299
P + + ++R ++P++R
Sbjct: 285 CPPEVYA----IMRGCWQREPQQR 304
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 41/252 (16%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + ++++E G L D +I + Y E+
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G G+ + + APE L ++ +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 235 DIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLT 293
D+W+ GV+L+ I G+ P+ +++ +L+ D E +L+R
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRMERP--EGCPEKVYELMRACWQ 248
Query: 294 QDPKKRITSAQV 305
+P R + A++
Sbjct: 249 WNPSDRPSFAEI 260
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 35/210 (16%)
Query: 141 NIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICSKDENALLKATDFG 200
NIV+ + A D+ +V +L G I + G S + +E+ L+ DFG
Sbjct: 113 NIVKCQ-ALSDEHVQFLVYQLLRG---LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG 168
Query: 201 LSVFIEEGKVYRDIVGSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF----W 254
L+ +E V + +Y APE++ Y + +DIWS G I+ LL G F +
Sbjct: 169 LARQADEEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
Query: 255 AETEKGIFDAI------LQGDIDFESA--------PWPTISSS---------AKDLVRRM 291
+ K I + + + I E A P P S A DL+ RM
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRM 286
Query: 292 LTQDPKKRITSAQVLEHPWIKEGGEASDKP 321
L D +R+++A+ L H + + + D+P
Sbjct: 287 LVLDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 75
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSERA---- 181
G + ++++E G L D +I + Y E+
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 182 ---AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G G+ + + APE L ++ +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 195 DVWAFGVLLWEIATYGMSPY 214
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITA 418
LK+ F +D + G I + L+ L LG +LTE E++ ++ D DG+GT+DY EF
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Query: 419 TM 420
M
Sbjct: 69 MM 70
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDD---DTIKEIISEVDTDNDGRINYDEF 486
L +AF+ DK+ G I +D L +K +GD+ D I+ +I+E DTD G ++Y+EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILK--SLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 487 -CAMMRS 492
C MM S
Sbjct: 66 KCLMMSS 72
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 12/58 (20%)
Query: 333 FRAMNKLKKLALKV---------IAENLSTEEIQGLKQMFTNIDTDNSGTITYEELKA 381
FR ++K KK +KV + + L+ +EI+ M DTD SGT+ YEE K
Sbjct: 13 FRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIE---NMIAETDTDGSGTVDYEEFKC 67
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 13 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 63
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ +++V E G L D + IA
Sbjct: 64 MKKLRHEKLVQLY--AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 121
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + + G+ + +
Sbjct: 122 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWT 179
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 236
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + ++P++R T
Sbjct: 237 CPESLHDLMCQCWRKEPEERPT 258
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 86 ELGRGQFGVTYL--CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIV 143
ELG G FG +L C + ++ K +++ + D +RE +++ L Q +IV
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 83
Query: 144 EFKGAYEDKQSVHVVME-------------------LCAGGE-------------LFDRI 171
F G + + + +V E L AGGE
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 172 IAKG-------HYSERAAASI-CSKDENALLKATDFGLSVFIEEGKVYRDIVGS-----A 218
+A G H+ R A+ C + ++K DFG+S I YR VG
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPI 201
Query: 219 YYVAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-DIDFESA 275
++ PE +L R++ E D+WS GV+L+ I G P++ + D I QG +++ A
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 261
Query: 276 PWPTISSSAKDLVRRMLTQDPKKR 299
P + + ++R ++P++R
Sbjct: 262 CPPEVYA----IMRGCWQREPQQR 281
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 61/281 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKDDIKREIQIMQHLSG 138
SFGK LG G FG T + A +++ + L +++ + E++++ +L
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK------------------------ 174
NIV GA V+ E C G+L + + K
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 175 -----GHYSERAAASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
+ + A + SK+ N LL K DFGL+ I+ Y +
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VK 227
Query: 216 GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF-WAETEKGIFDAILQG 268
G+A ++APE + Y E D+WS G+ L+ L S G P+ + + I +G
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 269 --DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
+ E AP + D+++ DP KR T Q+++
Sbjct: 288 FRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 429 DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDNDGRINYDEF 486
D + + F+ FD + G I++ EL A++ G D ++ +++E+DTD DG I+++EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEF 60
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
++++F DT+ G I+ EL L LGS + EVQ++M D DG+G ID+ EFI+
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 61/281 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKDDIKREIQIMQHLSG 138
SFGK LG G FG T + A +++ + L +++ + E++++ +L
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK------------------------ 174
NIV GA V+ E C G+L + + K
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 175 -----GHYSERAAASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
+ + A + SK+ N LL K DFGL+ I+ Y +
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VK 204
Query: 216 GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF-WAETEKGIFDAILQG 268
G+A ++APE + Y E D+WS G+ L+ L S G P+ + + I +G
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264
Query: 269 --DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
+ E AP + D+++ DP KR T Q+++
Sbjct: 265 FRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 86 ELGRGQFGVTYL--CTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIV 143
ELG G FG +L C + ++ K +++ + D +RE +++ L Q +IV
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 77
Query: 144 EFKGAYEDKQSVHVVME-------------------LCAGGE-------------LFDRI 171
F G + + + +V E L AGGE
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 172 IAKG-------HYSERAAASI-CSKDENALLKATDFGLSVFIEEGKVYRDIVGS-----A 218
+A G H+ R A+ C + ++K DFG+S I YR VG
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPI 195
Query: 219 YYVAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-DIDFESA 275
++ PE +L R++ E D+WS GV+L+ I G P++ + D I QG +++ A
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 255
Query: 276 PWPTISSSAKDLVRRMLTQDPKKR 299
P + + ++R ++P++R
Sbjct: 256 CPPEVYA----IMRGCWQREPQQR 275
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 429 DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEIISEVDTDNDGRINYDEF 486
D + + F+ FD + G I++ EL A++ G D ++ +++E+DTD DG I+++EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEF 59
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
++++F DT+ G I+ EL L LGS + EVQ++M D DG+G ID+ EFI+
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 61/281 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKDDIKREIQIMQHLSG 138
SFGK LG G FG T + A +++ + L +++ + E++++ +L
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK------------------------ 174
NIV GA V+ E C G+L + + K
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 175 -----GHYSERAAASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
+ + A + SK+ N LL K DFGL+ I+ Y +
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VK 220
Query: 216 GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF-WAETEKGIFDAILQG 268
G+A ++APE + Y E D+WS G+ L+ L S G P+ + + I +G
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 280
Query: 269 --DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
+ E AP + D+++ DP KR T Q+++
Sbjct: 281 FRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 361 QMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATM 420
+ F D +++G ++ +L+ L LG KLT+AEV +L++ +VD NG IDY +FI +
Sbjct: 87 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146
Query: 421 HR 422
+
Sbjct: 147 RQ 148
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 360 KQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITAT 419
K +FT D G I + L L +G T VQ ++ A + + ++ IT
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 420 MHRHKLERD-------DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGD---DDTIKEI 469
+ ++ E D + KAFQ FDK+++G +++ +L + G+G+ D + E+
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLT--GLGEKLTDAEVDEL 124
Query: 470 ISEVDTDNDGRINYDEFC 487
+ V+ D++G I+Y +F
Sbjct: 125 LKGVEVDSNGEIDYKKFI 142
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 73/308 (23%)
Query: 81 YSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQ-----H 135
Y K +G G G+ + R A K +S R + RE+ +M+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LSGQPNIVEFKGAYEDKQSVHVVMELCAGGE----------------LFDRIIAKGHYSE 179
+ G N+ + + E+ Q V++VMEL L+ + H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 180 RAAASICSKD---------ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEV-LRRR 229
+A I +D + LK DFGL+ + V + YY APEV L
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 230 YGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAI- 265
Y + +D+WS G I+ IL G P F + + + +
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 266 ------------LQGDIDF--ESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
L D+ F +S +S A+DL+ +ML D KRI+ + L+HP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 312 KEGGEASD 319
+ S+
Sbjct: 322 NVWYDPSE 329
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 426 ERD--DHLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRIN 482
ERD + + KAF+ FD DNSG ITI +L K+ G ++ ++E+I+E D ++D I+
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 483 YDEFCAMMR 491
DEF +M+
Sbjct: 64 EDEFIRIMK 72
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EEI ++F D DNSGTIT ++L+ LG LTE E+Q+++ AD + + ID
Sbjct: 7 SREEILKAFRLF---DDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 412 YIEFI 416
EFI
Sbjct: 64 EDEFI 68
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Query: 371 SGTITYEELKAGLARL-----GSKLTEAEVQQLMEAADVDGNGTIDYIEFITA--TMHRH 423
SG ++ EE K SK E + D +G+GTID+ EFI A R
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAE----HVFRTFDANGDGTIDFREFIIALSVTSRG 95
Query: 424 KLERDDHLYKAFQHFDKDNSGFITIDE-LEIAMKDY-------GMGDDDTIKE-----II 470
KLE+ L AF +D D +G+I+ E LEI Y M +D++ E I
Sbjct: 96 KLEQ--KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIF 153
Query: 471 SEVDTDNDGRINYDEF 486
++DT+ DG+++ +EF
Sbjct: 154 RQMDTNRDGKLSLEEF 169
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 91
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ ++ +E + G+ ++A E L+ +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 252
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 46/223 (20%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIV 143
K +G G+FG G++ C +I K T + D E IM PNI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 144 EFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKG-------HYS 178
+G + V ++ E G L R I G Y
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 179 ER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVGSAYYVAPEVLR 227
R AA + N + K +DFG+S +E+ GK+ + APE +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI------PIRWTAPEAIA 192
Query: 228 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
R++ D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 61/281 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKDDIKREIQIMQHLSG 138
SFGK LG G FG T + A +++ + L +++ + E++++ +L
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 139 QPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAK------------------------ 174
NIV GA V+ E C G+L + + K
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 175 -----GHYSERAAASICSKD--------ENALL------KATDFGLSVFIEEGKVYRDIV 215
+ + A + SK+ N LL K DFGL+ I+ Y +
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VK 222
Query: 216 GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF-WAETEKGIFDAILQG 268
G+A ++APE + Y E D+WS G+ L+ L S G P+ + + I +G
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 282
Query: 269 --DIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLE 307
+ E AP + D+++ DP KR T Q+++
Sbjct: 283 FRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 38/200 (19%)
Query: 86 ELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+LG GQ+G Y A K++ + + + ++ +E +M+ + PN+V+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHVVMELCAGGELFD--------------------RIIAKGHYSER----- 180
G + +++ E G L D +I + Y E+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 181 --AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVL-RRRYGKEI 234
AA C EN L+K DFGLS + G G+ + + APE L ++ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 235 DIWSAGVILY-ILLSGVPPF 253
D+W+ GV+L+ I G+ P+
Sbjct: 199 DVWAFGVLLWEIATYGMSPY 218
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 46/223 (20%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIV 143
K +G G+FG G++ C +I K T + D E IM PNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 144 EFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKG-------HYS 178
+G + V ++ E G L R I G Y
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 179 ER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVGSAYYVAPEVLR 227
R AA + N + K +DFG+S +E+ GK+ + APE +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI------PIRWTAPEAIA 186
Query: 228 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
R++ D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCA 488
L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 489 MMR 491
M+
Sbjct: 68 FMK 70
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 5 SEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 412 YIEFI 416
Y EF+
Sbjct: 62 YDEFL 66
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 411 DYIEFITATMHRHK 424
D+ EF+ + + K
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 48/222 (21%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIVEF 145
+G G+FG G++ +I K+ T+ + D E IM PNI+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIHL 88
Query: 146 KGAYEDKQSVHVVMELCAGGELFDRIIAK---------------------------GHYS 178
+G + V +V E G L D + K G+
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVH 147
Query: 179 ERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY----------YVAPEVLR- 227
AA + N + K +DFGLS +V D +AY + APE +
Sbjct: 148 RDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 228 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
R++ D+WS G++++ ++S G P+W T + + A+ +G
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 46 GPTPAAAPVSGLKQAVPRPDTNTILGKPYEDVKLHYSFGKELGRGQFGVTYLCTE-NSTG 104
GP +S L + + + ++G L F + +GRG FG Y T ++ G
Sbjct: 1 GPGTVHIDLSALNPELVQAVQHVVIGPS----SLIVHFNEVIGRGHFGCVYHGTLLDNDG 56
Query: 105 RQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKG-AYEDKQSVHVVMELCA 163
++ C S ++ + E IM+ S PN++ G + S VV+
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 164 GGELFDRI------------------IAKG-------HYSER-AAASICSKDENALLKAT 197
G+L + I +AKG + R AA C DE +K
Sbjct: 116 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 198 DFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GV 250
DFGL+ ++ +E + G+ ++A E L+ +++ + D+WS GV+L+ L++ G
Sbjct: 176 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 235
Query: 251 PPFWAETEKGIFDAILQG 268
PP+ I +LQG
Sbjct: 236 PPYPDVNTFDITVYLLQG 253
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 52/257 (20%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+GRG FGV +C + A K I +++++ E++ + ++ PNIV+
Sbjct: 17 VGRGAFGV--VCKAKWRAKDVAIKQIE-----SESERKAFIVELRQLSRVN-HPNIVKLY 68
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAK---GHYSERAAASICS---------------- 187
GA + V +VME GG L++ + +Y+ A S C
Sbjct: 69 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 188 ------KDENALL-------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKE 233
K N LL K DFG + I+ GSA ++APEV Y ++
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEK 184
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAK---DLVRR 290
D++S G+IL+ +++ PF E G + + + P P I + K L+ R
Sbjct: 185 CDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRP-PLIKNLPKPIESLMTR 240
Query: 291 MLTQDPKKRITSAQVLE 307
++DP +R + ++++
Sbjct: 241 CWSKDPSQRPSMEEIVK 257
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCA 488
L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 489 MMR 491
M+
Sbjct: 66 FMK 68
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
S EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 3 SEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 59
Query: 412 YIEFI 416
Y EF+
Sbjct: 60 YDEFL 64
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 48/224 (21%)
Query: 85 KELGRGQFGVTYLCTENSTGRQFACKSISKRKL-VTKNDKDDIKREIQIMQHLSGQPNIV 143
K +G G+FG G++ C +I K T + D E IM PNI+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 144 EFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH--------- 176
+G + V ++ E G L R I G
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 177 YSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY----------YVAPEVL 226
+ + AA +I + N + K +DFG+S +V D +AY + APE +
Sbjct: 154 HRDLAARNILV-NSNLVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 227 R-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
R++ D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 52/257 (20%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFK 146
+GRG FGV +C + A K I +++++ E++ + ++ PNIV+
Sbjct: 16 VGRGAFGV--VCKAKWRAKDVAIKQIE-----SESERKAFIVELRQLSRVN-HPNIVKLY 67
Query: 147 GAYEDKQSVHVVMELCAGGELFDRIIAK---GHYSERAAASICS---------------- 187
GA + V +VME GG L++ + +Y+ A S C
Sbjct: 68 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 188 ------KDENALL-------KATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLR-RRYGKE 233
K N LL K DFG + I+ GSA ++APEV Y ++
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEK 183
Query: 234 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAK---DLVRR 290
D++S G+IL+ +++ PF E G + + + P P I + K L+ R
Sbjct: 184 CDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRP-PLIKNLPKPIESLMTR 239
Query: 291 MLTQDPKKRITSAQVLE 307
++DP +R + ++++
Sbjct: 240 CWSKDPSQRPSMEEIVK 256
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 65
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + Y GS + + PEVL ++
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 48 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY--------- 219
Y R AA + N + K +DFGL G+V D +AY
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGL------GRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 97
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ ++ +E + G+ ++A E L+ +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 38/218 (17%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
+F KELG GQFGV A K I + + +D+ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHE-K 80
Query: 142 IVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGH-------------------YSER-- 180
+V+ G ++ + ++ E A G L + + H Y E
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 181 -----AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YVAPEVLR-RRYG 231
AA C ++ ++K +DFGLS ++ + + VGS + + PEVL ++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMYSKFS 199
Query: 232 KEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ DIW+ GV+++ + S G P+ T + I QG
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 189 DENALLKATDFGLSVFIE-EGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYI 245
+E LK DFGL+ K Y + V + +Y P++L Y +ID+W G I Y
Sbjct: 134 NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE 193
Query: 246 LLSGVPPFWAET--EKGIFDAILQGDIDFESAP------------------------WPT 279
+ +G P F T E+ F + G E+ P P
Sbjct: 194 MATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPR 253
Query: 280 ISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIKEGGEASDKPIDSAVLSRMKQFR 334
+ S DL+ ++L + + RI++ ++HP+ GE K D+ + +K+ +
Sbjct: 254 LDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQ 308
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 351 LSTEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTI 410
LS E I K F D D G I+ +EL + LG T+ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 411 DYIEFITATMHRHK 424
D+ EF+ + + K
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 434 AFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCAMM 490
AF FD D G I+ EL M+ G + + II EVD D G I+++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCA 488
L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 489 MMR 491
M+
Sbjct: 71 FMK 73
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 8 TEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 412 YIEFI 416
Y EF+
Sbjct: 65 YDEFL 69
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 430 HLYKAFQHFDKDNSGFITIDELEIAMKDYGMG-DDDTIKEIISEVDTDNDGRINYDEFCA 488
L F+ FDK+ G+I ++EL+I ++ G +D I+E++ + D +NDGRI+YDEF
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 489 MMR 491
M+
Sbjct: 76 FMK 78
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 352 STEEIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTID 411
+ EE+ L +MF D + G I EELK L G +TE ++++LM+ D + +G ID
Sbjct: 13 TEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 412 YIEFI 416
Y EF+
Sbjct: 70 YDEFL 74
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 93
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ ++ +E + G+ ++A E L+ +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 254
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 110
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 221
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 271
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 151
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ ++ +E + G+ ++A E L+ +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 312
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 90
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ ++ +E + G+ ++A E L+ +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 251
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 111
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 222
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 272
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ ++ +E + G+ ++A E L+ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 87
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 198
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 203
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 73/286 (25%)
Query: 87 LGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQ------- 139
LG+G FG R +A K I T+ I E+ ++ L+ Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 140 -----PNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSER------------AA 182
N V+ A + K ++ + ME C L+D I ++ +R A
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 183 ASICSK--------------DENALLKATDFGLSVFIEEGKVYRDI-------------- 214
+ I S+ DE+ +K DFGL+ V+R +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLPGSS 184
Query: 215 ------VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAI 265
+G+A YVA EVL Y ++ID++S G+I + + + PF E+ I +
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKL 241
Query: 266 LQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
I+F K ++R ++ DP KR + +L W+
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 91
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 202
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 252
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 132 IMQHLSGQP--NIVEFKGAYEDKQSVHVVMELCAGGELFDR--IIAKGHYSERAAASICS 187
+M+++ G +IV +G K+++ V+ + C + II + + A+I
Sbjct: 111 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGII----HRDVKPANIMI 166
Query: 188 KDENALLKATDFGLSVFIEEG----KVYRDIVGSAYYVAPEVLRRRYGKEID----IWSA 239
NA+ K DFG++ I + ++G+A Y++PE R G +D ++S
Sbjct: 167 SATNAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSL 222
Query: 240 GVILYILLSGVPPFWAETEKGIFDAILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKR 299
G +LY +L+G PPF ++ + ++ D SA +S+ +V + L ++P+ R
Sbjct: 223 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
Query: 300 ITSA 303
+A
Sbjct: 283 YQTA 286
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 90
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 201
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 89
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 200
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 203
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 47/230 (20%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E +KL K+LG GQFG ++ N++ + A K++ + + E +
Sbjct: 10 PRESIKLV----KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQA----FLEEANL 60
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L +V ++ ++++ E A G L D + IA
Sbjct: 61 MKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 119
Query: 174 KG----------HYSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---Y 220
+G H RAA + S E+ + K DFGL+ IE+ + Y G+ + +
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLVS--ESLMCKIADFGLARVIEDNE-YTAREGAKFPIKW 176
Query: 221 VAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG 268
APE + + + ++WS G++LY I+ G P+ T + A+ QG
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG 226
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
L +F +D D SG I+ EL+ L+ + V+ ++ D + +++ EF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 418 ATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEI-ISEVDTD 476
+ + F+ +D+DNSG I +EL+ A+ +G D +I I + D
Sbjct: 88 VWKYITDWQ------NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 477 NDGRINYDEF---CAMMRSGT 494
G+I +D+F C +++ T
Sbjct: 142 GRGQIAFDDFIQGCIVLQRLT 162
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 356 IQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF 415
I + +F D DNSG I ELK L+ G +L++ L+ D G G I + +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 416 ITATMHRHKLERDDHLYKAFQHFDKDNSGFITI 448
I + +L F+ +D D G+I +
Sbjct: 152 IQGCIVLQRLT------DIFRRYDTDQDGWIQV 178
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 48 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVGSA 218
Y R AA + N + K +DFGLS +E+ GK+
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI------PI 214
Query: 219 YYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 48 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY--------- 219
Y R AA + N + K +DFGLS +V D +AY
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 48 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY--------- 219
Y R AA + N + K +DFGLS +V D +AY
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 48 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVGSA 218
Y R AA + N + K +DFGLS +E+ GK+
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI------PI 214
Query: 219 YYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 47/230 (20%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E +KL K LG GQFG ++ N++ + A K++ + + E +
Sbjct: 11 PRESIKLV----KRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQA----FLEEANL 61
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L +V ++ ++++ E A G L D + IA
Sbjct: 62 MKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 120
Query: 174 KG----------HYSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---Y 220
+G H RAA + S E+ + K DFGL+ IE+ + Y G+ + +
Sbjct: 121 EGMAYIERKNYIHRDLRAANVLVS--ESLMCKIADFGLARVIEDNE-YTAREGAKFPIKW 177
Query: 221 VAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG 268
APE + + + D+WS G++LY I+ G P+ T + A+ QG
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 46 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 100 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVGSA 218
Y R AA + N + K +DFGLS +E+ GK+
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI------PI 212
Query: 219 YYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 58/232 (25%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQIMQ 134
S K +G G+FG E +GR + K S++ + L T+ + D E IM
Sbjct: 48 SIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 135 HLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAKGH 176
PNI+ +G + V +V E G L R IA G
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 177 -------YSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY--------- 219
Y R AA + N + K +DFGLS +V D +AY
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 43/207 (20%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLV--TKNDKDDIKREIQIMQHLSGQ 139
+ G+ +G G FG Y G+ ++ + T K E+ +++ +
Sbjct: 15 TVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 67
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELF------------DRIIAKGHYSERA-----A 182
NI+ F G Y K + +V + C G L+ ++I + R A
Sbjct: 68 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 183 ASICSKD---------ENALLKATDFGLSVFIEE---GKVYRDIVGSAYYVAPEVLRRR- 229
SI +D E+ +K DFGL+ + + GS ++APEV+R +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 230 ---YGKEIDIWSAGVILYILLSGVPPF 253
Y + D+++ G++LY L++G P+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 84
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 176 HYSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYY-------------- 220
+ R AA C DE +K DFGL+ RD+ YY
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLA---------RDMYDKEYYSVHNKTGAKLPVKW 195
Query: 221 VAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+A E L+ +++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 245
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 226 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 58/234 (24%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQI 132
+ S K +G G+FG E +GR + K S++ + L T+ + D E I
Sbjct: 17 NISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAK 174
M PNI+ +G + V +V E G L R IA
Sbjct: 71 MGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 175 GH-------YSER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVG 216
G Y R AA + N + K +DFGLS +E+ GK+
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI------ 183
Query: 217 SAYYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 226 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 49/262 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P E ++L +LG+G FG ++ T N T R A K++ + + +E Q+
Sbjct: 6 PRESLRLEV----KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQV 56
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI-------------------IA 173
M+ L + + + A ++ + +V E + G L D + IA
Sbjct: 57 MKKLRHEKLVQLY--AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 114
Query: 174 KGH-YSERA--------AASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY---YV 221
G Y ER AA+I EN + K DFGL+ IE+ + G+ + +
Sbjct: 115 SGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWT 172
Query: 222 APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGDIDFESAPWPT 279
APE L R+ + D+WS G++L L + G P+ + + D + +G + P
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPE 229
Query: 280 ISSSAKDLVRRMLTQDPKKRIT 301
S DL+ + ++P++R T
Sbjct: 230 CPESLHDLMCQCWRKEPEERPT 251
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 92/238 (38%), Gaps = 51/238 (21%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISK-----RKLVTKNDKDDIKREIQIMQHL 136
+ GK LG G FG + + ++++ + T+ D D+ E+++M+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 SGQPNIVEFKGAYEDKQSVHVVMELCAGGEL---------------------------FD 169
NI+ GA ++V++E + G L F
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 170 RIIAKGHYSERAAASICSKD--------------ENALLKATDFGLSVFIEEGKVYRDIV 215
+++ + R + S+ EN ++K DFGL+ I Y++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 216 GS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG 268
++APE L R Y + D+WS GV+++ I G P+ + +F + +G
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 58/234 (24%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQI 132
+ S K +G G+FG E +GR + K S++ + L T+ + D E I
Sbjct: 17 NISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAK 174
M PNI+ +G + V +V E G L R IA
Sbjct: 71 MGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 175 GH-------YSER-AAASICSKDENALLKATDFGLSVFIEE----------GKVYRDIVG 216
G Y R AA + N + K +DFGLS +E+ GK+
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI------ 183
Query: 217 SAYYVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 172 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 231
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 232 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 291
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 292 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 190 ENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILL 247
E+ L+ D+GL+ F G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 165 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224
Query: 248 SGVPPFWAETE--------------KGIFDAILQGDIDFE-------------------- 273
PF+ + + ++D I + +I+ +
Sbjct: 225 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 284
Query: 274 SAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWI 311
S +S A D + ++L D + R+T+ + +EHP+
Sbjct: 285 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
L +F +D D SG I+ EL+ L+ + V+ ++ D + +++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 418 ATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEI-ISEVDTD 476
+ + F+ +D+DNSG I +EL+ A+ +G D +I I + D
Sbjct: 69 VWKYITDWQ------NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 122
Query: 477 NDGRINYDEF---CAMMRSGT 494
G+I +D+F C +++ T
Sbjct: 123 GRGQIAFDDFIQGCIVLQRLT 143
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 356 IQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF 415
I + +F D DNSG I ELK L+ G +L++ L+ D G G I + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 416 ITATMHRHKLERDDHLYKAFQHFDKDNSGFITI 448
I + +L F+ +D D G+I +
Sbjct: 133 IQGCIVLQRLT------DIFRRYDTDQDGWIQV 159
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 355 EIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIE 414
+IQ ++++ ID D SGT+ E++ L G KL ++ Q++ A D ID+
Sbjct: 603 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 415 FITATMHRHKLERDDHLYKAFQHFDKDNSGFITID 449
F+ L R + L+K F+ D +N+G I +D
Sbjct: 662 FVRC------LVRLEILFKIFKQLDPENTGTIQLD 690
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 355 EIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIE 414
+IQ ++++ ID D SGT+ E++ L G KL ++ Q++ A D ID+
Sbjct: 603 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 415 FITATMHRHKLERDDHLYKAFQHFDKDNSGFITID 449
F+ L R + L+K F+ D +N+G I +D
Sbjct: 662 FVRC------LVRLEILFKIFKQLDPENTGTIQLD 690
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 355 EIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIE 414
+IQ ++++ ID D SGT+ E++ L G KL ++ Q++ A D ID+
Sbjct: 603 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 415 FITATMHRHKLERDDHLYKAFQHFDKDNSGFITID 449
F+ L R + L+K F+ D +N+G I +D
Sbjct: 662 FVRC------LVRLEILFKIFKQLDPENTGTIQLD 690
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 36/221 (16%)
Query: 83 FGKELGRGQFGVTYLCTE-NSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPN 141
F + +GRG FG Y T ++ G++ C S ++ + E IM+ S PN
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 93
Query: 142 IVEFKG-AYEDKQSVHVVMELCAGGELFDRI------------------IAKG------- 175
++ G + S VV+ G+L + I +AKG
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 176 HYSER-AAASICSKDENALLKATDFGLS--VFIEEGKVYRDIVGSAY---YVAPEVLR-R 228
+ R AA C DE +K DFGL+ + +E + G+ ++A E L+ +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 229 RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
++ + D+WS GV+L+ L++ G PP+ I +LQG
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 254
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 40/213 (18%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P+ D+ + +++G G FG + + G A K + ++ + ++ RE+ I
Sbjct: 35 PWCDLNIK----EKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAER-VNEFLREVAI 87
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI--------------------I 172
M+ L PNIV F GA ++ +V E + G L+ + +
Sbjct: 88 MKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 173 AKG-HYSERAAASICSKD---ENAL------LKATDFGLSVFIEEGKVY-RDIVGSAYYV 221
AKG +Y I +D N L +K DFGLS + + G+ ++
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWM 206
Query: 222 APEVLRRRYGKE-IDIWSAGVILYILLSGVPPF 253
APEVLR E D++S GVIL+ L + P+
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 57/237 (24%)
Query: 73 PYEDVKLHY-----SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKD 124
PY+ K + GK LGRG FG + C++++ + L T ++
Sbjct: 18 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 77
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAY-EDKQSVHVVMELCAGGEL---------------- 167
+ E++I+ H+ N+V GA + + V++E C G L
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE 137
Query: 168 -----------------FDRIIAKGH---------YSERAAASICSKDENALLKATDFGL 201
+ +AKG + + AA +I ++N ++K DFGL
Sbjct: 138 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGL 196
Query: 202 SVFIEEGKVYR---DIVGSAYYVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ I + Y D ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 60/235 (25%)
Query: 80 HYSFGKELGRGQFGVTYLCTENSTGR-QFACK---SISKRKL---VTKNDKDDIKREIQI 132
+ S K +G G+FG E +GR + K S++ + L T+ + D E I
Sbjct: 46 NISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIAK 174
M PNI+ +G + V +V E G L R IA
Sbjct: 100 MGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 175 GH---------YSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY------ 219
G + + AA +I + N + K +DFGLS +V D +AY
Sbjct: 159 GMKYLSDMGAVHRDLAARNILI-NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGK 211
Query: 220 ----YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 57/237 (24%)
Query: 73 PYEDVKLHY-----SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKD 124
PY+ K + GK LGRG FG + C++++ + L T ++
Sbjct: 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 75
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAY-EDKQSVHVVMELCAGGEL---------------- 167
+ E++I+ H+ N+V GA + + V++E C G L
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 168 -----------------FDRIIAKGH---------YSERAAASICSKDENALLKATDFGL 201
+ +AKG + + AA +I ++N ++K DFGL
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGL 194
Query: 202 S--VFIEEGKVYR-DIVGSAYYVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ ++ + V + D ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 57/237 (24%)
Query: 73 PYEDVKLHY-----SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKD 124
PY+ K + GK LGRG FG + C++++ + L T ++
Sbjct: 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 75
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAY-EDKQSVHVVMELCAGGEL---------------- 167
+ E++I+ H+ N+V GA + + V++E C G L
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 168 -----------------FDRIIAKGH---------YSERAAASICSKDENALLKATDFGL 201
+ +AKG + + AA +I ++N ++K DFGL
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGL 194
Query: 202 SVFIEEGKVYR---DIVGSAYYVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ I + Y D ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 71/252 (28%)
Query: 126 IKREIQIMQHLSGQPNIVEFKGAYE--DKQSVHVVMELCAGGELFDRIIAKGHYSERAAA 183
+ REI+++ H PNI+ + + ++ ++H +L EL +A+ + +R
Sbjct: 76 VLREIRLLNHFH-HPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIV- 130
Query: 184 SICSKDENALLKATDFGLSVFIEEGKVYRDI----------------------------- 214
I + + GL V E G V+RD+
Sbjct: 131 -ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 215 ----VGSAYYVAPEVLRRRYG--KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ- 267
V +Y APE++ + G K +D+WSAG ++ + + F T + I++
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
Query: 268 ------GDIDFESAP-----------------W----PTISSSAKDLVRRMLTQDPKKRI 300
D+ S+P W PT A DL+ +ML +P++RI
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 301 TSAQVLEHPWIK 312
++ Q L HP+ +
Sbjct: 310 STEQALRHPYFE 321
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 71/252 (28%)
Query: 126 IKREIQIMQHLSGQPNIVEFKGAYE--DKQSVHVVMELCAGGELFDRIIAKGHYSERAAA 183
+ REI+++ H PNI+ + + ++ ++H +L EL +A+ + +R
Sbjct: 76 VLREIRLLNHFH-HPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIV- 130
Query: 184 SICSKDENALLKATDFGLSVFIEEGKVYRDI----------------------------- 214
I + + GL V E G V+RD+
Sbjct: 131 -ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 215 ----VGSAYYVAPEVLRRRYG--KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ- 267
V +Y APE++ + G K +D+WSAG ++ + + F T + I++
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
Query: 268 ------GDIDFESAP-----------------W----PTISSSAKDLVRRMLTQDPKKRI 300
D+ S+P W PT A DL+ +ML +P++RI
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 301 TSAQVLEHPWIK 312
++ Q L HP+ +
Sbjct: 310 STEQALRHPYFE 321
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 66/236 (27%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL----------VTKNDKDDIKREIQ 131
S K +G G+FG E +GR K SK+++ T+ + D E
Sbjct: 48 SIDKVVGAGEFG------EVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIA 173
IM PNI+ +G + V +V E G L R IA
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 174 KGH---------YSERAAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY----- 219
G + + AA +I + N + K +DFGLS +V D +AY
Sbjct: 158 SGMKYLSDMGFVHRDLAARNILI-NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGG 210
Query: 220 -----YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 48/217 (22%)
Query: 73 PYEDVKLHYSFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLVTKNDKDDIKREIQI 132
P+ D+ + +++G G FG + + G A K + ++ + ++ RE+ I
Sbjct: 35 PWCDLNIK----EKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAER-VNEFLREVAI 87
Query: 133 MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRI--------------------I 172
M+ L PNIV F GA ++ +V E + G L+ + +
Sbjct: 88 MKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 173 AKG-HYSERAAASICSK---------DENALLKATDFGL-----SVFIEEGKVYRDIVGS 217
AKG +Y I + D+ +K DFGL S F+ + G+
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS----KSAAGT 202
Query: 218 AYYVAPEVLRRRYGKE-IDIWSAGVILYILLSGVPPF 253
++APEVLR E D++S GVIL+ L + P+
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 57/237 (24%)
Query: 73 PYEDVKLHY-----SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL---VTKNDKD 124
PY+ K + GK LGRG FG + C++++ + L T ++
Sbjct: 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 112
Query: 125 DIKREIQIMQHLSGQPNIVEFKGAY-EDKQSVHVVMELCAGGEL---------------- 167
+ E++I+ H+ N+V GA + + V++E C G L
Sbjct: 113 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 172
Query: 168 -----------------FDRIIAKGH---------YSERAAASICSKDENALLKATDFGL 201
+ +AKG + + AA +I ++N ++K DFGL
Sbjct: 173 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGL 231
Query: 202 SVFIEEGKVYR---DIVGSAYYVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 253
+ I + Y D ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 355 EIQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIE 414
+IQ ++++ ID D SGT+ E++ L G K+ ++ Q++ A D ID+
Sbjct: 602 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMP-CQLHQVIVARFADDQLIIDFDN 660
Query: 415 FITATMHRHKLERDDHLYKAFQHFDKDNSGFITID 449
F+ L R + L+K F+ D +N+G I +D
Sbjct: 661 FVRC------LVRLETLFKIFKQLDPENTGTIELD 689
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
L +F +D D SG I+ EL+ L+ + V+ ++ D + +++ EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 418 ATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEI-ISEVDTD 476
+ + F+ +D+DNSG I +EL+ A+ +G D +I I + D
Sbjct: 87 VWKYITDWQ------NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 140
Query: 477 NDGRINYDEF---CAMMRSGT 494
G+I +D+F C +++ T
Sbjct: 141 GRGQIAFDDFIQGCIVLQRLT 161
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 356 IQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF 415
I + +F D DNSG I ELK L+ G +L++ L+ D G G I + +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 416 ITATMHRHKLERDDHLYKAFQHFDKDNSGFITI 448
I + +L F+ +D D G+I +
Sbjct: 151 IQGCIVLQRLT------DIFRRYDTDQDGWIQV 177
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 47/209 (22%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKLV--TKNDKDDIKREIQIMQHLSGQ 139
+ G+ +G G FG Y G+ ++ + T K E+ +++ +
Sbjct: 27 TVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 79
Query: 140 PNIVEFKGAYEDKQSVHVVMELCAGGELF------------DRIIAKGHYSERA-----A 182
NI+ F G Y K + +V + C G L+ ++I + R A
Sbjct: 80 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 183 ASICSKD---------ENALLKATDFGLSVFIEEGKV-----YRDIVGSAYYVAPEVLRR 228
SI +D E+ +K DFGL+ E+ + + + GS ++APEV+R
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 229 R----YGKEIDIWSAGVILYILLSGVPPF 253
+ Y + D+++ G++LY L++G P+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
L +F +D D SG I+ EL+ L+ + V+ ++ D + +++ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 418 ATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEI-ISEVDTD 476
+ + F+ +D+DNSG I +EL+ A+ +G D +I I + D
Sbjct: 66 VWKYITDWQ------NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 119
Query: 477 NDGRINYDEF---CAMMRSGT 494
G+I +D+F C +++ T
Sbjct: 120 GRGQIAFDDFIQGCIVLQRLT 140
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 356 IQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF 415
I + +F D DNSG I ELK L+ G +L++ L+ D G G I + +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 416 ITATMHRHKLERDDHLYKAFQHFDKDNSGFITI 448
I + +L F+ +D D G+I +
Sbjct: 130 IQGCIVLQRLT------DIFRRYDTDQDGWIQV 156
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 69/173 (39%), Gaps = 49/173 (28%)
Query: 190 ENALLKATDFGLS-VFIEEGKVYRD---IVGSAYYVAPEVL--RRRYGKEIDIWSAGVIL 243
E +K D G + +F K D +V + +Y APE+L R Y K IDIW+ G I
Sbjct: 167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF 226
Query: 244 YILLSGVPPFWAETE-------------KGIFDAI-LQGDIDFES-APWPTISSSAKD-- 286
LL+ P F E IF+ + D D+E P S+ KD
Sbjct: 227 AELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFR 286
Query: 287 --------------------------LVRRMLTQDPKKRITSAQVLEHPWIKE 313
L++++LT DP KRITS Q ++ P+ E
Sbjct: 287 RNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 64/235 (27%)
Query: 82 SFGKELGRGQFGVTYLCTENSTGRQFACKSISKRKL----------VTKNDKDDIKREIQ 131
S K +G G+FG E +GR K SK+++ T+ + D E
Sbjct: 48 SIDKVVGAGEFG------EVCSGR---LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 132 IMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGEL------------------FDRIIA 173
IM PNI+ +G + V +V E G L R IA
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 174 KGH-------YSER-AAASICSKDENALLKATDFGLSVFIEEGKVYRDIVGSAY------ 219
G Y R AA + N + K +DFGL+ +V D +AY
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA------RVLEDDPEAAYTTRGGK 211
Query: 220 ----YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 268
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 359 LKQMFTNIDTDNSGTITYEELKAGLAR-LGSKLTEAEVQQLMEAADVDGNGTIDYIEFIT 417
L +F +D D SG I+ EL+ L+ + V+ ++ D + +++ EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 418 ATMHRHKLERDDHLYKAFQHFDKDNSGFITIDELEIAMKDYGMGDDDTIKEI-ISEVDTD 476
+ + F+ +D+DNSG I +EL+ A+ +G D +I I + D
Sbjct: 65 VWKYITDWQ------NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 118
Query: 477 NDGRINYDEF---CAMMRSGT 494
G+I +D+F C +++ T
Sbjct: 119 GRGQIAFDDFIQGCIVLQRLT 139
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 356 IQGLKQMFTNIDTDNSGTITYEELKAGLARLGSKLTEAEVQQLMEAADVDGNGTIDYIEF 415
I + +F D DNSG I ELK L+ G +L++ L+ D G G I + +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 416 ITATMHRHKLERDDHLYKAFQHFDKDNSGFITI 448
I + +L F+ +D D G+I +
Sbjct: 129 IQGCIVLQRLT------DIFRRYDTDQDGWIQV 155
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,440,895
Number of Sequences: 62578
Number of extensions: 667058
Number of successful extensions: 6069
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 393
Number of HSP's that attempted gapping in prelim test: 2047
Number of HSP's gapped (non-prelim): 2285
length of query: 501
length of database: 14,973,337
effective HSP length: 103
effective length of query: 398
effective length of database: 8,527,803
effective search space: 3394065594
effective search space used: 3394065594
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)