Query 010804
Match_columns 500
No_of_seqs 205 out of 3648
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 14:36:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010804.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010804hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 8.8E-64 3E-68 506.7 49.5 441 31-487 1-465 (481)
2 2b5e_A Protein disulfide-isome 100.0 4.6E-61 1.6E-65 489.1 41.3 434 28-486 11-470 (504)
3 3apo_A DNAJ homolog subfamily 100.0 5.8E-48 2E-52 413.0 38.0 417 29-483 114-656 (780)
4 2r2j_A Thioredoxin domain-cont 100.0 3.4E-45 1.2E-49 358.1 30.8 354 30-398 4-376 (382)
5 3uem_A Protein disulfide-isome 100.0 3.2E-44 1.1E-48 349.8 37.1 339 136-485 10-359 (361)
6 3us3_A Calsequestrin-1; calciu 100.0 1.5E-44 5.2E-49 350.7 32.1 321 29-363 11-354 (367)
7 1sji_A Calsequestrin 2, calseq 100.0 2E-42 7E-47 334.7 32.2 317 29-361 9-350 (350)
8 3apo_A DNAJ homolog subfamily 100.0 4.3E-37 1.5E-41 328.9 32.7 412 33-485 337-769 (780)
9 3idv_A Protein disulfide-isome 100.0 1.6E-30 5.5E-35 238.4 22.0 226 29-485 13-239 (241)
10 3ed3_A Protein disulfide-isome 100.0 3.7E-29 1.3E-33 234.7 23.3 223 26-252 12-277 (298)
11 3ec3_A Protein disulfide-isome 100.0 4.9E-29 1.7E-33 228.5 20.4 228 140-377 3-248 (250)
12 2h8l_A Protein disulfide-isome 100.0 2.1E-28 7.1E-33 224.9 20.4 231 139-378 2-251 (252)
13 4f9z_D Endoplasmic reticulum r 99.9 2.9E-24 9.8E-29 194.0 19.0 207 144-359 10-227 (227)
14 1a8l_A Protein disulfide oxido 99.9 1.8E-21 6.2E-26 176.1 15.4 195 268-482 22-225 (226)
15 2hls_A Protein disulfide oxido 99.9 9.7E-21 3.3E-25 172.2 16.9 211 267-500 25-243 (243)
16 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.8E-20 6E-25 171.4 18.7 207 29-241 10-237 (244)
17 2ywm_A Glutaredoxin-like prote 99.8 9.4E-21 3.2E-25 171.7 13.5 195 265-484 18-221 (229)
18 1sji_A Calsequestrin 2, calseq 99.8 6.5E-19 2.2E-23 169.9 26.8 307 145-486 13-349 (350)
19 3uem_A Protein disulfide-isome 99.8 1.4E-18 4.9E-23 168.6 27.5 301 30-355 16-355 (361)
20 3h79_A Thioredoxin-like protei 99.8 5.2E-20 1.8E-24 150.2 13.4 111 28-140 12-126 (127)
21 3us3_A Calsequestrin-1; calciu 99.8 2.4E-18 8.3E-23 166.6 26.9 311 144-489 14-354 (367)
22 1a8l_A Protein disulfide oxido 99.8 6.9E-19 2.4E-23 159.0 19.0 202 39-356 10-225 (226)
23 3t58_A Sulfhydryl oxidase 1; o 99.8 1.3E-18 4.3E-23 174.4 21.2 207 29-241 10-237 (519)
24 2ywm_A Glutaredoxin-like prote 99.8 1.2E-18 4.1E-23 157.8 18.8 200 40-357 10-220 (229)
25 3zzx_A Thioredoxin; oxidoreduc 99.8 2.9E-19 1E-23 139.5 11.6 100 33-140 2-104 (105)
26 2dj1_A Protein disulfide-isome 99.8 6.5E-19 2.2E-23 146.4 13.0 115 29-147 15-129 (140)
27 1mek_A Protein disulfide isome 99.8 3.7E-19 1.3E-23 143.6 10.2 113 29-144 5-119 (120)
28 2voc_A Thioredoxin; electron t 99.8 2E-18 6.8E-23 137.3 12.9 105 33-144 3-107 (112)
29 3h79_A Thioredoxin-like protei 99.8 9.3E-19 3.2E-23 142.7 10.4 109 373-481 13-126 (127)
30 3gnj_A Thioredoxin domain prot 99.8 1.6E-18 5.4E-23 137.8 11.2 106 31-142 4-110 (111)
31 3uvt_A Thioredoxin domain-cont 99.8 2.8E-18 9.6E-23 136.3 12.4 107 30-140 4-110 (111)
32 3die_A Thioredoxin, TRX; elect 99.8 4.1E-18 1.4E-22 134.1 13.2 104 31-141 3-106 (106)
33 3tco_A Thioredoxin (TRXA-1); d 99.8 3.2E-18 1.1E-22 135.5 12.5 106 30-141 3-108 (109)
34 3f8u_A Protein disulfide-isome 99.8 1.7E-16 5.7E-21 160.2 28.0 306 32-361 111-465 (481)
35 2dml_A Protein disulfide-isome 99.8 2.5E-18 8.6E-23 140.8 11.8 108 29-141 15-123 (130)
36 2trx_A Thioredoxin; electron t 99.8 7E-18 2.4E-22 133.3 13.5 105 31-141 2-107 (108)
37 1nsw_A Thioredoxin, TRX; therm 99.8 5.2E-18 1.8E-22 133.2 11.8 103 33-141 2-104 (105)
38 3bj5_A Protein disulfide-isome 99.8 7.7E-18 2.6E-22 139.6 13.2 129 238-372 7-142 (147)
39 1x5d_A Protein disulfide-isome 99.8 6.3E-18 2.1E-22 139.0 12.5 111 29-142 5-117 (133)
40 2yzu_A Thioredoxin; redox prot 99.8 8.1E-18 2.8E-22 133.1 12.7 106 32-143 2-107 (109)
41 2av4_A Thioredoxin-like protei 99.8 6.7E-18 2.3E-22 137.3 11.5 105 377-483 23-139 (160)
42 2qsi_A Putative hydrogenase ex 99.7 6.1E-18 2.1E-22 135.6 11.1 103 33-141 17-122 (137)
43 1x5e_A Thioredoxin domain cont 99.7 1.2E-17 4E-22 136.0 13.1 112 29-148 5-116 (126)
44 3zzx_A Thioredoxin; oxidoreduc 99.7 2.1E-18 7.3E-23 134.6 8.2 97 381-481 7-104 (105)
45 2i4a_A Thioredoxin; acidophIle 99.7 1.6E-17 5.6E-22 130.8 13.5 104 31-140 2-106 (107)
46 3p2a_A Thioredoxin 2, putative 99.7 1.1E-17 3.8E-22 140.2 13.2 109 29-143 36-144 (148)
47 3apq_A DNAJ homolog subfamily 99.7 4.3E-18 1.5E-22 151.7 11.1 115 30-150 96-210 (210)
48 3ga4_A Dolichyl-diphosphooligo 99.7 1.3E-17 4.5E-22 140.9 13.2 115 30-146 17-157 (178)
49 3hz4_A Thioredoxin; NYSGXRC, P 99.7 7.4E-18 2.5E-22 139.8 11.5 107 30-142 5-112 (140)
50 2djj_A PDI, protein disulfide- 99.7 1.4E-17 4.9E-22 134.4 13.0 111 372-485 4-119 (121)
51 2r2j_A Thioredoxin domain-cont 99.7 1.4E-16 4.7E-21 155.4 22.0 302 145-486 7-332 (382)
52 4euy_A Uncharacterized protein 99.7 5.8E-18 2E-22 132.9 9.8 98 37-141 7-104 (105)
53 3hxs_A Thioredoxin, TRXP; elec 99.7 8.7E-18 3E-22 139.7 11.3 108 29-142 20-139 (141)
54 2ppt_A Thioredoxin-2; thiredox 99.7 1.4E-17 4.7E-22 140.4 12.6 108 30-143 46-153 (155)
55 3qfa_C Thioredoxin; protein-pr 99.7 5.8E-18 2E-22 135.4 9.7 104 30-141 11-116 (116)
56 2dj3_A Protein disulfide-isome 99.7 3E-17 1E-21 135.0 13.7 113 373-485 5-120 (133)
57 1w4v_A Thioredoxin, mitochondr 99.7 1.7E-17 5.7E-22 133.5 11.8 108 28-141 10-118 (119)
58 2o8v_B Thioredoxin 1; disulfid 99.7 1.4E-17 4.7E-22 135.7 11.4 105 31-141 22-127 (128)
59 2e0q_A Thioredoxin; electron t 99.7 2.2E-17 7.5E-22 129.3 12.1 103 33-142 1-103 (104)
60 2djj_A PDI, protein disulfide- 99.7 1E-17 3.6E-22 135.2 10.3 110 29-143 5-118 (121)
61 2trx_A Thioredoxin; electron t 99.7 1.8E-17 6.1E-22 130.9 11.4 107 375-483 2-108 (108)
62 1syr_A Thioredoxin; SGPP, stru 99.7 1.9E-17 6.4E-22 131.7 11.6 107 27-141 5-111 (112)
63 1thx_A Thioredoxin, thioredoxi 99.7 3.2E-17 1.1E-21 131.0 12.4 107 30-142 6-113 (115)
64 1t00_A Thioredoxin, TRX; redox 99.7 3.4E-17 1.2E-21 130.2 12.4 106 31-142 5-111 (112)
65 3gnj_A Thioredoxin domain prot 99.7 6.8E-18 2.3E-22 134.1 8.2 107 375-483 4-110 (111)
66 3aps_A DNAJ homolog subfamily 99.7 8.7E-18 3E-22 135.9 9.0 108 30-143 2-114 (122)
67 2dj3_A Protein disulfide-isome 99.7 9.9E-18 3.4E-22 137.9 9.4 115 28-145 4-121 (133)
68 2o8v_B Thioredoxin 1; disulfid 99.7 4.4E-17 1.5E-21 132.7 13.0 106 375-482 22-127 (128)
69 2qsi_A Putative hydrogenase ex 99.7 4.4E-18 1.5E-22 136.5 6.8 106 376-483 16-123 (137)
70 1dby_A Chloroplast thioredoxin 99.7 3E-17 1E-21 129.3 11.4 103 33-141 3-106 (107)
71 3f3q_A Thioredoxin-1; His TAG, 99.7 3.7E-17 1.3E-21 129.2 11.8 100 33-140 9-108 (109)
72 1x5d_A Protein disulfide-isome 99.7 9.5E-18 3.2E-22 138.0 8.7 112 374-485 6-119 (133)
73 2qgv_A Hydrogenase-1 operon pr 99.7 8.2E-18 2.8E-22 135.4 7.9 107 32-144 18-127 (140)
74 2l5l_A Thioredoxin; structural 99.7 3.7E-17 1.3E-21 134.8 12.0 107 31-143 9-127 (136)
75 1fb6_A Thioredoxin M; electron 99.7 5.5E-17 1.9E-21 127.3 12.4 103 33-141 2-105 (105)
76 2l57_A Uncharacterized protein 99.7 5.2E-17 1.8E-21 132.1 12.3 108 32-144 5-119 (126)
77 2voc_A Thioredoxin; electron t 99.7 4.1E-17 1.4E-21 129.7 11.3 107 377-487 3-109 (112)
78 2pu9_C TRX-F, thioredoxin F-ty 99.7 7.6E-17 2.6E-21 127.9 12.6 104 30-141 4-110 (111)
79 1r26_A Thioredoxin; redox-acti 99.7 4.8E-17 1.6E-21 131.7 11.5 105 30-142 18-123 (125)
80 2av4_A Thioredoxin-like protei 99.7 2.8E-17 9.6E-22 133.6 10.0 103 33-141 23-138 (160)
81 3hxs_A Thioredoxin, TRXP; elec 99.7 1.6E-17 5.5E-22 138.1 8.9 111 372-484 19-140 (141)
82 2l5l_A Thioredoxin; structural 99.7 4.3E-17 1.5E-21 134.4 11.4 115 374-490 8-133 (136)
83 2i1u_A Thioredoxin, TRX, MPT46 99.7 6E-17 2E-21 130.7 12.0 107 30-142 11-118 (121)
84 1ep7_A Thioredoxin CH1, H-type 99.7 5.8E-17 2E-21 128.9 11.5 104 32-142 3-111 (112)
85 3ul3_B Thioredoxin, thioredoxi 99.7 5.8E-17 2E-21 132.2 11.6 99 35-139 29-127 (128)
86 1xwb_A Thioredoxin; dimerizati 99.7 9.7E-17 3.3E-21 126.1 12.5 102 33-141 2-106 (106)
87 2dj1_A Protein disulfide-isome 99.7 2.6E-17 8.8E-22 136.7 9.6 114 372-487 14-128 (140)
88 1gh2_A Thioredoxin-like protei 99.7 9.4E-17 3.2E-21 126.5 12.3 101 33-141 3-106 (107)
89 2i4a_A Thioredoxin; acidophIle 99.7 5.2E-17 1.8E-21 127.9 10.6 105 375-481 2-106 (107)
90 1faa_A Thioredoxin F; electron 99.7 7.1E-17 2.4E-21 130.9 11.7 104 30-141 17-123 (124)
91 4euy_A Uncharacterized protein 99.7 5.3E-17 1.8E-21 127.4 10.0 98 381-482 7-104 (105)
92 2dml_A Protein disulfide-isome 99.7 2.1E-17 7.3E-22 135.2 7.9 109 374-484 16-125 (130)
93 2vlu_A Thioredoxin, thioredoxi 99.7 8.9E-17 3.1E-21 129.9 11.4 105 30-142 12-120 (122)
94 2qgv_A Hydrogenase-1 operon pr 99.7 4.2E-18 1.4E-22 137.1 3.3 107 376-485 18-127 (140)
95 3uvt_A Thioredoxin domain-cont 99.7 4.5E-17 1.5E-21 129.2 9.3 105 375-481 5-110 (111)
96 3d6i_A Monothiol glutaredoxin- 99.7 9.9E-17 3.4E-21 127.5 11.1 103 33-141 2-108 (112)
97 1oaz_A Thioredoxin 1; immune s 99.7 2.9E-17 1E-21 132.6 7.9 105 31-141 3-122 (123)
98 3qou_A Protein YBBN; thioredox 99.7 1.1E-16 3.7E-21 150.2 12.9 108 30-143 6-115 (287)
99 1t00_A Thioredoxin, TRX; redox 99.7 5.5E-17 1.9E-21 129.0 9.4 107 375-483 5-111 (112)
100 3dxb_A Thioredoxin N-terminall 99.7 1.5E-16 5E-21 142.9 13.1 112 27-144 8-120 (222)
101 3die_A Thioredoxin, TRX; elect 99.7 6.1E-17 2.1E-21 127.3 9.3 103 376-482 4-106 (106)
102 1thx_A Thioredoxin, thioredoxi 99.7 6.4E-17 2.2E-21 129.3 9.4 108 375-484 7-114 (115)
103 3m9j_A Thioredoxin; oxidoreduc 99.7 1.2E-16 4.2E-21 125.3 10.8 97 37-141 7-105 (105)
104 1w4v_A Thioredoxin, mitochondr 99.7 3.9E-17 1.3E-21 131.3 8.0 110 372-483 10-119 (119)
105 3tco_A Thioredoxin (TRXA-1); d 99.7 6.1E-17 2.1E-21 128.0 8.9 105 375-482 4-108 (109)
106 3idv_A Protein disulfide-isome 99.7 2.3E-16 8E-21 143.9 14.1 113 29-145 128-240 (241)
107 1dby_A Chloroplast thioredoxin 99.7 7.2E-17 2.5E-21 127.1 9.2 104 377-482 3-106 (107)
108 2xc2_A Thioredoxinn; oxidoredu 99.7 1.7E-16 5.8E-21 127.2 11.3 102 31-141 13-117 (117)
109 1v98_A Thioredoxin; oxidoreduc 99.7 2.1E-16 7E-21 131.1 12.2 107 31-143 33-139 (140)
110 3evi_A Phosducin-like protein 99.7 2.3E-16 7.9E-21 125.2 11.7 101 375-481 3-112 (118)
111 2es7_A Q8ZP25_salty, putative 99.7 4.6E-17 1.6E-21 134.3 8.0 111 32-149 18-132 (142)
112 2l6c_A Thioredoxin; oxidoreduc 99.7 1.1E-16 3.6E-21 126.7 9.8 103 33-143 5-107 (110)
113 3ga4_A Dolichyl-diphosphooligo 99.7 1.1E-16 3.8E-21 135.2 10.4 114 374-487 17-157 (178)
114 2djk_A PDI, protein disulfide- 99.7 2.9E-16 9.9E-21 128.7 12.6 125 242-373 3-131 (133)
115 2ppt_A Thioredoxin-2; thiredox 99.7 8.2E-17 2.8E-21 135.6 9.4 109 374-485 46-154 (155)
116 3hz4_A Thioredoxin; NYSGXRC, P 99.7 4.8E-17 1.6E-21 134.8 7.8 109 374-484 5-113 (140)
117 2wz9_A Glutaredoxin-3; protein 99.7 2E-16 6.8E-21 133.2 11.6 106 31-144 12-120 (153)
118 2vim_A Thioredoxin, TRX; thior 99.7 2.6E-16 8.9E-21 123.2 11.5 100 34-141 2-104 (104)
119 2dj0_A Thioredoxin-related tra 99.7 1.7E-17 5.8E-22 137.1 4.8 107 29-140 5-119 (137)
120 1mek_A Protein disulfide isome 99.7 6.8E-17 2.3E-21 130.1 8.2 110 375-485 7-119 (120)
121 2i1u_A Thioredoxin, TRX, MPT46 99.7 7.3E-17 2.5E-21 130.2 8.4 110 373-484 10-119 (121)
122 1oaz_A Thioredoxin 1; immune s 99.7 8.5E-17 2.9E-21 129.9 8.6 106 376-483 4-123 (123)
123 1nsw_A Thioredoxin, TRX; therm 99.7 1.1E-16 3.8E-21 125.5 9.0 103 377-482 2-104 (105)
124 3qfa_C Thioredoxin; protein-pr 99.7 6.1E-17 2.1E-21 129.5 7.4 104 375-482 12-116 (116)
125 3dxb_A Thioredoxin N-terminall 99.7 4.2E-16 1.4E-20 139.9 13.7 113 372-486 9-121 (222)
126 1xfl_A Thioredoxin H1; AT3G510 99.7 3.6E-16 1.2E-20 126.5 12.1 106 28-141 13-123 (124)
127 3aps_A DNAJ homolog subfamily 99.7 2.7E-17 9.2E-22 133.0 5.4 109 375-485 3-115 (122)
128 3p2a_A Thioredoxin 2, putative 99.7 1.1E-16 3.7E-21 134.2 9.2 109 374-485 37-145 (148)
129 1zma_A Bacterocin transport ac 99.7 1E-16 3.5E-21 128.7 8.7 105 30-138 11-117 (118)
130 1fb6_A Thioredoxin M; electron 99.7 1.3E-16 4.5E-21 125.1 8.8 104 377-482 2-105 (105)
131 2oe3_A Thioredoxin-3; electron 99.7 2.5E-16 8.4E-21 125.4 10.4 100 32-139 13-113 (114)
132 2c0g_A ERP29 homolog, windbeut 99.7 4.9E-16 1.7E-20 139.6 13.4 111 26-143 11-133 (248)
133 2yzu_A Thioredoxin; redox prot 99.7 1.5E-16 5.1E-21 125.7 8.9 106 376-484 2-107 (109)
134 3gix_A Thioredoxin-like protei 99.7 2.9E-16 9.9E-21 131.2 10.1 100 36-141 9-120 (149)
135 2pu9_C TRX-F, thioredoxin F-ty 99.7 3.7E-16 1.3E-20 123.9 10.0 106 373-482 3-110 (111)
136 3emx_A Thioredoxin; structural 99.7 2.4E-16 8.1E-21 129.7 9.0 105 30-144 15-128 (135)
137 2e0q_A Thioredoxin; electron t 99.7 2.4E-16 8.1E-21 123.4 8.5 103 377-483 1-103 (104)
138 2j23_A Thioredoxin; immune pro 99.6 3.4E-16 1.2E-20 126.1 8.9 105 31-141 15-120 (121)
139 1x5e_A Thioredoxin domain cont 99.6 2.8E-16 9.7E-21 127.7 8.4 109 374-487 6-114 (126)
140 3f3q_A Thioredoxin-1; His TAG, 99.6 3.5E-16 1.2E-20 123.5 7.9 102 376-482 8-109 (109)
141 1gh2_A Thioredoxin-like protei 99.6 6.2E-16 2.1E-20 121.7 9.2 103 377-483 3-107 (107)
142 1v98_A Thioredoxin; oxidoreduc 99.6 4.3E-16 1.5E-20 129.2 8.6 107 375-484 33-139 (140)
143 2trc_P Phosducin, MEKA, PP33; 99.6 8.2E-17 2.8E-21 142.9 4.2 130 347-481 72-211 (217)
144 1r26_A Thioredoxin; redox-acti 99.6 5.6E-16 1.9E-20 125.4 8.8 103 377-484 21-124 (125)
145 2kuc_A Putative disulphide-iso 99.6 7.5E-16 2.6E-20 126.0 9.6 107 34-143 9-122 (130)
146 1xwb_A Thioredoxin; dimerizati 99.6 8E-16 2.7E-20 120.8 9.3 103 377-482 2-106 (106)
147 2vm1_A Thioredoxin, thioredoxi 99.6 1.8E-15 6.1E-20 121.4 11.3 105 31-143 6-115 (118)
148 2dbc_A PDCL2, unnamed protein 99.6 4.6E-15 1.6E-19 121.8 14.0 104 374-483 9-121 (135)
149 1ti3_A Thioredoxin H, PTTRXH1; 99.6 1.4E-15 4.9E-20 120.9 10.4 102 32-141 5-111 (113)
150 1syr_A Thioredoxin; SGPP, stru 99.6 5.7E-16 1.9E-20 123.0 7.9 105 373-482 7-111 (112)
151 3evi_A Phosducin-like protein 99.6 2.1E-15 7.2E-20 119.7 11.1 98 32-139 4-111 (118)
152 1ep7_A Thioredoxin CH1, H-type 99.6 6E-16 2E-20 122.9 7.8 105 376-483 3-111 (112)
153 3d22_A TRXH4, thioredoxin H-ty 99.6 2.2E-15 7.5E-20 124.7 11.5 106 30-143 23-133 (139)
154 1qgv_A Spliceosomal protein U5 99.6 1.9E-15 6.5E-20 125.1 11.0 102 381-484 10-122 (142)
155 3ed3_A Protein disulfide-isome 99.6 1.1E-15 3.8E-20 143.0 10.6 112 372-485 14-144 (298)
156 2f51_A Thioredoxin; electron t 99.6 1.4E-15 4.6E-20 121.9 9.7 105 32-143 4-114 (118)
157 2vlu_A Thioredoxin, thioredoxi 99.6 9.1E-16 3.1E-20 123.9 8.7 106 375-484 13-121 (122)
158 3qcp_A QSOX from trypanosoma b 99.6 3.4E-16 1.2E-20 152.4 7.2 111 29-142 21-139 (470)
159 2qc7_A ERP31, ERP28, endoplasm 99.6 3.9E-15 1.3E-19 133.4 13.5 104 31-141 5-118 (240)
160 2hls_A Protein disulfide oxido 99.6 3.6E-14 1.2E-18 128.8 19.7 201 39-358 15-227 (243)
161 3ul3_B Thioredoxin, thioredoxi 99.6 6.1E-16 2.1E-20 126.1 7.1 97 383-481 32-128 (128)
162 3gix_A Thioredoxin-like protei 99.6 7.9E-16 2.7E-20 128.6 7.8 102 380-483 9-121 (149)
163 3cxg_A Putative thioredoxin; m 99.6 1.9E-15 6.4E-20 123.9 9.8 105 29-142 18-129 (133)
164 1qgv_A Spliceosomal protein U5 99.6 1.9E-15 6.6E-20 125.1 9.7 99 37-141 10-120 (142)
165 1a0r_P Phosducin, MEKA, PP33; 99.6 7.3E-16 2.5E-20 138.3 7.3 129 349-482 87-225 (245)
166 3apq_A DNAJ homolog subfamily 99.6 1.3E-15 4.6E-20 135.5 8.8 109 374-485 96-204 (210)
167 2vim_A Thioredoxin, TRX; thior 99.6 1.9E-15 6.5E-20 118.2 8.6 101 378-482 2-104 (104)
168 3d6i_A Monothiol glutaredoxin- 99.6 1.4E-15 4.6E-20 120.9 7.9 105 377-483 2-109 (112)
169 1faa_A Thioredoxin F; electron 99.6 2.4E-15 8.1E-20 121.8 9.3 105 374-482 17-123 (124)
170 1xfl_A Thioredoxin H1; AT3G510 99.6 2.8E-15 9.5E-20 121.2 9.6 106 373-482 14-123 (124)
171 2xc2_A Thioredoxinn; oxidoredu 99.6 1.5E-15 5.2E-20 121.6 8.0 102 376-482 14-117 (117)
172 2fwh_A Thiol:disulfide interch 99.6 4.1E-15 1.4E-19 122.1 10.1 104 35-142 16-128 (134)
173 3m9j_A Thioredoxin; oxidoreduc 99.6 2.7E-15 9.3E-20 117.5 8.4 98 381-482 7-105 (105)
174 2wz9_A Glutaredoxin-3; protein 99.6 4.8E-15 1.7E-19 124.7 10.5 110 374-487 11-122 (153)
175 2yj7_A LPBCA thioredoxin; oxid 99.4 1.1E-16 3.7E-21 125.8 0.0 102 33-140 3-105 (106)
176 3qou_A Protein YBBN; thioredox 99.6 2.2E-15 7.6E-20 141.2 9.0 107 374-482 6-113 (287)
177 2l57_A Uncharacterized protein 99.6 2.4E-15 8.1E-20 122.2 8.0 95 391-487 24-121 (126)
178 2b5e_A Protein disulfide-isome 99.6 1.9E-13 6.5E-18 138.5 23.9 300 31-360 123-470 (504)
179 2oe3_A Thioredoxin-3; electron 99.6 1.6E-15 5.4E-20 120.7 6.7 100 376-480 13-113 (114)
180 4f9z_D Endoplasmic reticulum r 99.6 7.5E-14 2.5E-18 125.6 18.3 195 32-242 11-223 (227)
181 2dj0_A Thioredoxin-related tra 99.6 2.3E-16 7.8E-21 130.3 1.1 106 375-481 7-119 (137)
182 2es7_A Q8ZP25_salty, putative 99.6 6.8E-16 2.3E-20 127.2 3.8 109 376-488 18-130 (142)
183 2dbc_A PDCL2, unnamed protein 99.6 8E-15 2.7E-19 120.4 10.2 101 30-140 9-119 (135)
184 2l6c_A Thioredoxin; oxidoreduc 99.6 2E-15 7E-20 119.3 6.3 102 377-483 5-106 (110)
185 3fk8_A Disulphide isomerase; A 99.6 4.9E-15 1.7E-19 121.6 8.6 95 41-140 22-131 (133)
186 2yj7_A LPBCA thioredoxin; oxid 99.3 2.7E-16 9.1E-21 123.5 0.0 103 377-481 3-105 (106)
187 3emx_A Thioredoxin; structural 99.6 1.2E-15 4E-20 125.5 3.5 106 374-486 15-129 (135)
188 3d22_A TRXH4, thioredoxin H-ty 99.6 8.2E-15 2.8E-19 121.2 8.7 109 373-485 22-134 (139)
189 2j23_A Thioredoxin; immune pro 99.6 3.3E-15 1.1E-19 120.3 6.0 105 375-482 15-120 (121)
190 3q6o_A Sulfhydryl oxidase 1; p 99.6 1E-14 3.4E-19 133.1 10.0 112 374-486 11-130 (244)
191 1ti3_A Thioredoxin H, PTTRXH1; 99.6 5.2E-15 1.8E-19 117.6 6.9 105 375-483 4-112 (113)
192 2f51_A Thioredoxin; electron t 99.5 6.6E-15 2.3E-19 117.9 7.1 104 376-483 4-113 (118)
193 1zma_A Bacterocin transport ac 99.5 1.3E-15 4.4E-20 122.2 2.9 99 376-479 13-117 (118)
194 2vm1_A Thioredoxin, thioredoxi 99.5 9E-15 3.1E-19 117.2 7.9 106 375-484 6-115 (118)
195 2djk_A PDI, protein disulfide- 99.5 2.3E-14 7.7E-19 117.3 10.3 109 376-488 7-120 (133)
196 3cxg_A Putative thioredoxin; m 99.5 7.8E-15 2.7E-19 120.1 6.1 107 373-484 18-130 (133)
197 1wmj_A Thioredoxin H-type; str 99.5 1.6E-15 5.5E-20 124.0 1.7 107 29-143 12-123 (130)
198 2trc_P Phosducin, MEKA, PP33; 99.5 1.4E-14 4.6E-19 128.6 6.9 102 31-140 99-211 (217)
199 2c0g_A ERP29 homolog, windbeut 99.5 3.1E-14 1.1E-18 127.8 9.0 105 374-484 15-133 (248)
200 1wou_A Thioredoxin -related pr 99.5 4.8E-14 1.6E-18 113.8 8.8 101 32-139 6-122 (123)
201 1fo5_A Thioredoxin; disulfide 99.5 1.3E-13 4.5E-18 103.2 10.1 83 394-482 3-85 (85)
202 1a0r_P Phosducin, MEKA, PP33; 99.5 5E-14 1.7E-18 126.4 9.0 103 31-141 112-225 (245)
203 1fo5_A Thioredoxin; disulfide 99.5 6E-14 2E-18 105.1 8.1 83 49-141 3-85 (85)
204 3iv4_A Putative oxidoreductase 99.5 7.6E-14 2.6E-18 107.0 8.5 101 32-137 7-111 (112)
205 2lst_A Thioredoxin; structural 99.2 2.3E-15 7.8E-20 123.0 0.0 102 38-142 9-116 (130)
206 1zzo_A RV1677; thioredoxin fol 99.5 2.7E-13 9.1E-18 111.4 12.3 106 32-142 9-135 (136)
207 2qc7_A ERP31, ERP28, endoplasm 99.5 7E-14 2.4E-18 125.2 9.3 103 375-482 5-118 (240)
208 3f9u_A Putative exported cytoc 99.5 4.8E-14 1.6E-18 121.2 7.8 102 35-141 30-165 (172)
209 1lu4_A Soluble secreted antige 99.5 3.7E-13 1.3E-17 110.6 12.8 104 33-141 9-135 (136)
210 3or5_A Thiol:disulfide interch 99.5 4.8E-13 1.6E-17 114.0 13.5 109 31-143 17-152 (165)
211 1nho_A Probable thioredoxin; b 99.5 7.2E-14 2.5E-18 104.6 6.6 82 50-141 3-84 (85)
212 3erw_A Sporulation thiol-disul 99.5 3E-13 1E-17 112.5 10.8 103 33-138 20-145 (145)
213 3dml_A Putative uncharacterize 99.5 6.1E-14 2.1E-18 109.3 5.6 93 392-484 17-111 (116)
214 2ju5_A Thioredoxin disulfide i 99.4 1.9E-13 6.3E-18 115.0 9.0 96 43-142 42-152 (154)
215 2b5x_A YKUV protein, TRXY; thi 99.4 7.9E-13 2.7E-17 110.4 12.8 106 34-142 15-145 (148)
216 3t58_A Sulfhydryl oxidase 1; o 99.4 2.3E-13 8E-18 136.3 11.1 113 374-486 11-130 (519)
217 1wou_A Thioredoxin -related pr 99.4 1.1E-13 3.9E-18 111.5 7.0 101 377-480 7-122 (123)
218 1wmj_A Thioredoxin H-type; str 99.4 9.5E-15 3.2E-19 119.3 0.5 109 374-486 13-125 (130)
219 1nho_A Probable thioredoxin; b 99.4 1.2E-13 4.3E-18 103.3 6.4 82 395-482 3-84 (85)
220 2kuc_A Putative disulphide-iso 99.4 7.4E-14 2.5E-18 114.0 5.5 105 379-485 10-123 (130)
221 2h30_A Thioredoxin, peptide me 99.4 7.8E-13 2.7E-17 112.6 11.5 107 32-142 22-156 (164)
222 2f9s_A Thiol-disulfide oxidore 99.4 1.9E-12 6.3E-17 108.6 13.1 109 33-143 11-139 (151)
223 3qcp_A QSOX from trypanosoma b 99.4 2.3E-14 8E-19 139.5 1.5 102 373-474 21-131 (470)
224 3dml_A Putative uncharacterize 99.4 3.5E-14 1.2E-18 110.7 1.8 93 47-141 17-109 (116)
225 3raz_A Thioredoxin-related pro 99.4 2E-12 6.9E-17 108.4 12.8 105 37-143 13-141 (151)
226 3fk8_A Disulphide isomerase; A 99.4 1.7E-13 5.9E-18 112.3 5.6 97 383-481 16-131 (133)
227 3kp8_A Vkorc1/thioredoxin doma 99.4 7.3E-14 2.5E-18 108.8 3.0 79 46-141 10-94 (106)
228 2fwh_A Thiol:disulfide interch 99.4 1.3E-13 4.6E-18 113.0 4.7 99 381-482 18-127 (134)
229 2lja_A Putative thiol-disulfid 99.4 2.7E-12 9.4E-17 107.7 11.5 109 33-143 15-144 (152)
230 3lor_A Thiol-disulfide isomera 99.4 4.8E-12 1.6E-16 107.2 12.7 105 36-142 18-155 (160)
231 3eyt_A Uncharacterized protein 99.4 7.1E-12 2.4E-16 105.9 13.3 102 39-142 19-152 (158)
232 2h8l_A Protein disulfide-isome 99.4 2.2E-11 7.4E-16 111.3 17.2 197 31-243 6-229 (252)
233 2lst_A Thioredoxin; structural 99.1 5.9E-14 2E-18 114.6 0.0 95 391-487 17-120 (130)
234 2l5o_A Putative thioredoxin; s 99.4 4.3E-12 1.5E-16 106.6 11.5 106 33-142 13-141 (153)
235 3fkf_A Thiol-disulfide oxidore 99.4 4.4E-12 1.5E-16 105.8 11.3 105 33-142 16-146 (148)
236 4evm_A Thioredoxin family prot 99.3 7.9E-12 2.7E-16 102.7 12.2 104 34-140 8-137 (138)
237 3ia1_A THIO-disulfide isomeras 99.3 6.7E-12 2.3E-16 105.5 12.0 106 33-144 16-146 (154)
238 1sen_A Thioredoxin-like protei 99.3 2.4E-13 8.3E-18 115.5 2.9 99 39-141 37-147 (164)
239 3ira_A Conserved protein; meth 99.3 1.2E-12 4E-17 110.7 7.0 86 33-123 24-120 (173)
240 3hdc_A Thioredoxin family prot 99.3 9.9E-12 3.4E-16 105.0 12.7 107 33-143 26-153 (158)
241 3gl3_A Putative thiol:disulfid 99.3 1.2E-11 4.1E-16 103.7 13.0 105 37-143 17-143 (152)
242 3f9u_A Putative exported cytoc 99.3 1.1E-12 3.6E-17 112.7 6.4 103 379-483 30-166 (172)
243 3ph9_A Anterior gradient prote 99.3 8E-13 2.7E-17 109.5 4.3 96 40-141 36-144 (151)
244 1sen_A Thioredoxin-like protei 99.3 2.9E-13 9.8E-18 115.0 1.5 93 391-485 44-150 (164)
245 2lrn_A Thiol:disulfide interch 99.3 1.6E-11 5.5E-16 103.0 12.3 105 33-142 14-141 (152)
246 3hcz_A Possible thiol-disulfid 99.3 4.6E-12 1.6E-16 105.7 8.8 106 33-140 16-144 (148)
247 1lu4_A Soluble secreted antige 99.3 6.6E-12 2.2E-16 103.0 9.5 88 392-482 23-135 (136)
248 1ilo_A Conserved hypothetical 99.3 6.4E-12 2.2E-16 91.9 8.4 74 51-137 2-76 (77)
249 3kcm_A Thioredoxin family prot 99.3 2.2E-11 7.4E-16 102.4 12.7 108 33-142 13-143 (154)
250 3lwa_A Secreted thiol-disulfid 99.3 2.1E-11 7E-16 105.8 12.6 107 33-141 42-180 (183)
251 3iv4_A Putative oxidoreductase 99.3 8.5E-13 2.9E-17 101.2 3.1 97 377-478 8-111 (112)
252 1z6n_A Hypothetical protein PA 99.3 4E-12 1.4E-16 107.4 7.5 96 35-138 40-139 (167)
253 1zzo_A RV1677; thioredoxin fol 99.3 1.1E-11 3.7E-16 101.7 9.9 101 379-483 12-135 (136)
254 2ju5_A Thioredoxin disulfide i 99.3 4.7E-12 1.6E-16 106.4 7.6 99 383-484 34-153 (154)
255 3ec3_A Protein disulfide-isome 99.3 9.4E-11 3.2E-15 106.8 16.4 197 31-243 6-227 (250)
256 3ewl_A Uncharacterized conserv 99.3 2.3E-11 7.8E-16 100.7 10.6 104 33-141 12-140 (142)
257 1kng_A Thiol:disulfide interch 99.3 1.7E-11 5.8E-16 103.2 9.9 98 39-141 33-151 (156)
258 2lrt_A Uncharacterized protein 99.3 5.4E-11 1.9E-15 99.6 12.8 105 33-139 20-145 (152)
259 3eur_A Uncharacterized protein 99.3 2.9E-11 9.8E-16 100.1 11.0 102 33-139 16-142 (142)
260 2b5x_A YKUV protein, TRXY; thi 99.3 2E-11 6.9E-16 101.7 10.2 105 378-485 15-147 (148)
261 2b1k_A Thiol:disulfide interch 99.3 2.2E-11 7.6E-16 104.0 10.2 104 32-141 32-159 (168)
262 3ha9_A Uncharacterized thiored 99.2 3.1E-11 1.1E-15 102.7 10.7 104 32-141 21-163 (165)
263 3or5_A Thiol:disulfide interch 99.2 2E-11 6.8E-16 103.9 8.8 96 392-488 33-156 (165)
264 1z6n_A Hypothetical protein PA 99.2 8.4E-12 2.9E-16 105.5 6.0 88 380-470 41-131 (167)
265 2l4c_A Endoplasmic reticulum r 99.2 2.5E-11 8.4E-16 96.7 8.2 104 138-244 14-124 (124)
266 2dlx_A UBX domain-containing p 99.2 5.3E-11 1.8E-15 98.5 10.1 99 39-141 29-135 (153)
267 1i5g_A Tryparedoxin II; electr 99.2 8.3E-11 2.8E-15 97.5 11.3 92 32-124 12-126 (144)
268 3raz_A Thioredoxin-related pro 99.2 3.7E-11 1.3E-15 100.6 9.1 93 392-485 23-142 (151)
269 3kp8_A Vkorc1/thioredoxin doma 99.2 3.7E-12 1.3E-16 99.1 2.7 77 393-482 12-94 (106)
270 3ph9_A Anterior gradient prote 99.2 2.5E-11 8.5E-16 100.5 7.7 92 391-485 42-147 (151)
271 3kh7_A Thiol:disulfide interch 99.2 8.4E-11 2.9E-15 101.1 11.3 103 33-141 41-166 (176)
272 3fw2_A Thiol-disulfide oxidore 99.2 1.2E-10 4.1E-15 97.3 12.0 104 33-141 16-147 (150)
273 2f9s_A Thiol-disulfide oxidore 99.2 4.3E-11 1.5E-15 100.2 9.3 94 392-486 25-141 (151)
274 3erw_A Sporulation thiol-disul 99.2 5E-11 1.7E-15 98.8 9.0 87 392-479 33-145 (145)
275 3lor_A Thiol-disulfide isomera 99.2 9.5E-11 3.2E-15 99.1 10.7 93 392-485 29-157 (160)
276 1jfu_A Thiol:disulfide interch 99.2 2.1E-10 7.2E-15 99.7 13.0 109 33-143 45-181 (186)
277 1o8x_A Tryparedoxin, TRYX, TXN 99.2 1.7E-10 5.7E-15 96.0 11.4 90 33-124 14-126 (146)
278 2h30_A Thioredoxin, peptide me 99.2 1.8E-11 6.2E-16 104.0 5.6 107 376-484 22-157 (164)
279 3eyt_A Uncharacterized protein 99.2 9E-11 3.1E-15 99.0 9.9 94 392-486 27-155 (158)
280 3s9f_A Tryparedoxin; thioredox 99.2 1.7E-10 5.8E-15 98.0 11.0 89 33-123 34-145 (165)
281 2hyx_A Protein DIPZ; thioredox 99.2 1.5E-10 5E-15 110.0 11.7 101 39-141 73-198 (352)
282 1ilo_A Conserved hypothetical 99.1 2.9E-11 1E-15 88.3 5.0 74 396-478 2-76 (77)
283 2ywi_A Hypothetical conserved 99.1 1.6E-10 5.4E-15 101.4 10.6 106 35-142 32-174 (196)
284 3ewl_A Uncharacterized conserv 99.1 1.2E-10 3.9E-15 96.4 8.8 89 392-483 26-141 (142)
285 1o73_A Tryparedoxin; electron 99.1 3.2E-10 1.1E-14 93.9 11.4 89 34-124 15-126 (144)
286 1hyu_A AHPF, alkyl hydroperoxi 99.1 3.9E-10 1.3E-14 114.2 14.2 179 267-481 18-198 (521)
287 3ia1_A THIO-disulfide isomeras 99.1 1.1E-10 3.6E-15 98.1 8.3 90 394-487 31-148 (154)
288 2cvb_A Probable thiol-disulfid 99.1 3.4E-10 1.2E-14 98.5 11.8 108 33-143 18-160 (188)
289 2fgx_A Putative thioredoxin; N 99.1 1E-10 3.5E-15 89.8 7.2 77 50-137 30-106 (107)
290 2lja_A Putative thiol-disulfid 99.1 8.6E-11 2.9E-15 98.4 7.4 93 392-485 29-145 (152)
291 3fkf_A Thiol-disulfide oxidore 99.1 1.4E-10 4.7E-15 96.6 8.2 90 392-484 32-147 (148)
292 1jfu_A Thiol:disulfide interch 99.1 2.1E-10 7.1E-15 99.7 9.6 140 344-485 12-182 (186)
293 4fo5_A Thioredoxin-like protei 99.1 3.2E-10 1.1E-14 93.8 10.3 100 35-139 19-142 (143)
294 2l5o_A Putative thioredoxin; s 99.1 2.1E-10 7.3E-15 96.1 8.6 95 392-487 27-145 (153)
295 1ttz_A Conserved hypothetical 99.1 1.7E-10 5.6E-15 85.6 6.9 75 52-142 3-77 (87)
296 1ttz_A Conserved hypothetical 99.1 4.7E-11 1.6E-15 88.6 3.9 77 397-485 3-79 (87)
297 4evm_A Thioredoxin family prot 99.1 3E-10 1E-14 93.1 9.3 88 392-481 21-137 (138)
298 2lrn_A Thiol:disulfide interch 99.1 2.3E-10 7.8E-15 95.8 8.5 93 392-487 28-145 (152)
299 3hcz_A Possible thiol-disulfid 99.1 6.4E-11 2.2E-15 98.6 4.7 90 392-482 30-145 (148)
300 2ggt_A SCO1 protein homolog, m 99.1 1.2E-09 4.1E-14 92.6 12.4 108 34-141 9-160 (164)
301 3gl3_A Putative thiol:disulfid 99.1 2.8E-10 9.5E-15 95.2 8.3 95 392-487 27-146 (152)
302 3eur_A Uncharacterized protein 99.1 5.1E-10 1.7E-14 92.5 9.4 86 392-480 30-142 (142)
303 3lwa_A Secreted thiol-disulfid 99.1 2.3E-10 7.9E-15 99.1 7.6 91 392-483 58-181 (183)
304 2p5q_A Glutathione peroxidase 99.1 1.3E-09 4.5E-14 93.0 12.2 108 33-142 17-168 (170)
305 2fgx_A Putative thioredoxin; N 99.1 6.9E-11 2.4E-15 90.8 3.7 78 394-478 29-106 (107)
306 3kp9_A Vkorc1/thioredoxin doma 99.1 5.3E-11 1.8E-15 108.9 3.6 85 41-142 192-280 (291)
307 3u5r_E Uncharacterized protein 99.1 1.1E-09 3.8E-14 97.5 11.9 109 32-142 42-187 (218)
308 2b1k_A Thiol:disulfide interch 99.1 2.1E-10 7.1E-15 97.9 6.7 98 381-483 39-160 (168)
309 3ira_A Conserved protein; meth 99.0 6.1E-11 2.1E-15 100.2 2.9 80 381-463 28-118 (173)
310 3kcm_A Thioredoxin family prot 99.0 6.4E-10 2.2E-14 93.2 9.1 94 392-486 27-146 (154)
311 1un2_A DSBA, thiol-disulfide i 99.0 8.9E-11 3E-15 102.3 3.8 116 311-439 39-160 (197)
312 2rli_A SCO2 protein homolog, m 99.0 2E-09 6.8E-14 92.0 12.3 110 33-142 11-164 (171)
313 3ha9_A Uncharacterized thiored 99.0 4.5E-10 1.5E-14 95.5 7.9 88 392-483 36-164 (165)
314 3cmi_A Peroxiredoxin HYR1; thi 99.0 1E-09 3.5E-14 93.8 10.1 106 34-142 18-168 (171)
315 2p31_A CL683, glutathione pero 99.0 1.7E-09 5.6E-14 93.4 11.3 107 33-141 34-180 (181)
316 3hdc_A Thioredoxin family prot 99.0 1.1E-09 3.6E-14 92.4 9.8 91 392-483 40-152 (158)
317 3drn_A Peroxiredoxin, bacterio 99.0 2.4E-09 8.2E-14 90.5 11.7 93 33-127 13-130 (161)
318 2v1m_A Glutathione peroxidase; 99.0 2.3E-09 7.8E-14 91.4 11.7 107 33-141 16-166 (169)
319 2vup_A Glutathione peroxidase- 99.0 2.7E-09 9.1E-14 92.9 11.9 108 33-142 33-185 (190)
320 3dwv_A Glutathione peroxidase- 99.0 1.5E-09 5.1E-14 94.2 9.8 108 33-142 31-183 (187)
321 2lus_A Thioredoxion; CR-Trp16, 98.5 4.9E-11 1.7E-15 98.7 0.0 77 47-123 24-124 (143)
322 2k6v_A Putative cytochrome C o 99.0 6.5E-10 2.2E-14 95.1 7.0 105 34-140 22-171 (172)
323 3kij_A Probable glutathione pe 99.0 4E-09 1.4E-13 90.9 11.9 108 32-141 22-169 (180)
324 1kng_A Thiol:disulfide interch 99.0 8.2E-10 2.8E-14 92.8 6.7 88 392-483 41-152 (156)
325 2f8a_A Glutathione peroxidase 98.9 6.4E-09 2.2E-13 91.6 12.0 107 33-141 31-206 (208)
326 1xvw_A Hypothetical protein RV 98.9 5.8E-09 2E-13 88.0 11.1 105 33-139 20-157 (160)
327 2ls5_A Uncharacterized protein 98.5 1E-10 3.4E-15 98.9 0.0 104 35-140 20-146 (159)
328 2gs3_A PHGPX, GPX-4, phospholi 98.9 7.3E-09 2.5E-13 89.7 11.7 106 33-140 34-184 (185)
329 3s9f_A Tryparedoxin; thioredox 98.9 1.3E-09 4.5E-14 92.5 6.8 74 392-465 47-145 (165)
330 2obi_A PHGPX, GPX-4, phospholi 98.9 6.6E-09 2.3E-13 89.8 11.3 106 33-140 32-182 (183)
331 2ywi_A Hypothetical conserved 98.9 1.3E-09 4.3E-14 95.5 6.8 92 393-485 45-176 (196)
332 2cvb_A Probable thiol-disulfid 98.9 3.1E-09 1.1E-13 92.3 9.2 92 392-485 32-161 (188)
333 3fw2_A Thiol-disulfide oxidore 98.9 2.2E-09 7.6E-14 89.5 7.9 90 392-483 32-148 (150)
334 2lrt_A Uncharacterized protein 98.9 1.7E-09 6E-14 90.3 7.2 88 392-480 34-145 (152)
335 1i5g_A Tryparedoxin II; electr 98.9 1.2E-09 4.2E-14 90.4 6.2 74 392-465 27-125 (144)
336 1we0_A Alkyl hydroperoxide red 98.9 4.5E-09 1.5E-13 91.2 10.0 93 47-141 30-156 (187)
337 3kh7_A Thiol:disulfide interch 98.9 9.4E-10 3.2E-14 94.5 5.3 88 392-484 57-168 (176)
338 2dlx_A UBX domain-containing p 98.9 1.3E-09 4.5E-14 90.1 5.3 99 383-484 29-137 (153)
339 2hyx_A Protein DIPZ; thioredox 98.9 2.6E-09 8.8E-14 101.4 8.0 91 392-483 81-199 (352)
340 1zof_A Alkyl hydroperoxide-red 98.9 5.5E-09 1.9E-13 91.6 9.1 93 47-141 32-160 (198)
341 1o8x_A Tryparedoxin, TRYX, TXN 98.9 2.1E-09 7.1E-14 89.2 6.1 74 392-465 27-125 (146)
342 2bmx_A Alkyl hydroperoxidase C 98.9 7.7E-09 2.6E-13 90.4 10.0 94 47-142 44-170 (195)
343 2e7p_A Glutaredoxin; thioredox 98.9 7.2E-10 2.5E-14 88.0 2.9 89 40-140 12-106 (116)
344 1o73_A Tryparedoxin; electron 98.8 2.3E-09 7.9E-14 88.7 5.5 75 392-466 27-126 (144)
345 4fo5_A Thioredoxin-like protei 98.8 6.9E-09 2.4E-13 85.7 7.8 86 392-480 31-142 (143)
346 3u5r_E Uncharacterized protein 98.8 1E-08 3.5E-13 91.3 9.2 92 393-486 58-190 (218)
347 1qmv_A Human thioredoxin perox 98.8 2.9E-08 9.9E-13 86.8 11.4 94 46-141 32-162 (197)
348 2ls5_A Uncharacterized protein 98.3 5.6E-10 1.9E-14 94.2 0.0 91 392-483 32-148 (159)
349 2lus_A Thioredoxion; CR-Trp16, 98.3 6E-10 2E-14 92.1 0.0 78 393-470 25-129 (143)
350 1xzo_A BSSCO, hypothetical pro 98.8 4E-08 1.4E-12 84.0 11.5 110 33-142 18-172 (174)
351 2b7k_A SCO1 protein; metalloch 98.8 3.4E-08 1.2E-12 86.6 10.9 109 33-141 26-178 (200)
352 1wjk_A C330018D20RIK protein; 98.8 1.4E-08 4.8E-13 77.8 7.0 83 47-142 14-96 (100)
353 2ggt_A SCO1 protein homolog, m 98.7 2.7E-08 9.3E-13 84.1 9.1 93 392-484 22-162 (164)
354 1ego_A Glutaredoxin; electron 98.7 3.4E-08 1.2E-12 73.2 8.3 77 52-141 3-83 (85)
355 1wjk_A C330018D20RIK protein; 98.7 6.9E-09 2.4E-13 79.5 4.5 80 393-483 15-96 (100)
356 1uul_A Tryparedoxin peroxidase 98.7 5.1E-08 1.8E-12 85.6 10.4 93 47-141 35-164 (202)
357 2k8s_A Thioredoxin; dimer, str 98.7 9.4E-09 3.2E-13 75.3 4.4 58 52-113 4-61 (80)
358 2h01_A 2-Cys peroxiredoxin; th 98.7 5.2E-08 1.8E-12 84.8 9.8 93 47-141 30-158 (192)
359 1hyu_A AHPF, alkyl hydroperoxi 98.7 6.3E-08 2.1E-12 98.0 11.7 95 35-140 103-198 (521)
360 2i81_A 2-Cys peroxiredoxin; st 98.7 7.9E-08 2.7E-12 85.0 10.9 93 47-141 51-179 (213)
361 3kp9_A Vkorc1/thioredoxin doma 98.7 3.6E-09 1.2E-13 96.8 2.0 75 395-482 199-279 (291)
362 2k6v_A Putative cytochrome C o 98.7 1.9E-08 6.4E-13 85.9 6.5 89 392-481 34-171 (172)
363 2p5q_A Glutathione peroxidase 98.7 6.6E-08 2.3E-12 82.2 9.7 92 392-484 31-169 (170)
364 3cmi_A Peroxiredoxin HYR1; thi 98.7 3.9E-08 1.3E-12 83.8 8.1 91 392-484 31-169 (171)
365 3drn_A Peroxiredoxin, bacterio 98.7 3.6E-08 1.2E-12 83.1 7.7 88 393-481 28-147 (161)
366 2rli_A SCO2 protein homolog, m 98.7 6.1E-08 2.1E-12 82.6 9.2 93 392-484 25-165 (171)
367 1zye_A Thioredoxin-dependent p 98.7 6.5E-08 2.2E-12 86.0 9.3 93 47-141 55-184 (220)
368 3dwv_A Glutathione peroxidase- 98.7 1E-07 3.5E-12 82.5 10.3 92 392-484 45-184 (187)
369 2vup_A Glutathione peroxidase- 98.7 1.1E-07 3.8E-12 82.5 10.4 93 392-485 47-187 (190)
370 2jsy_A Probable thiol peroxida 98.6 1.9E-07 6.4E-12 79.2 11.3 104 33-140 29-165 (167)
371 2k8s_A Thioredoxin; dimer, str 98.6 4.5E-09 1.5E-13 77.1 0.7 58 396-455 3-61 (80)
372 3gkn_A Bacterioferritin comigr 98.6 2.1E-07 7.1E-12 78.6 11.1 106 33-140 20-160 (163)
373 2e7p_A Glutaredoxin; thioredox 98.6 2.5E-09 8.5E-14 84.8 -0.9 80 394-482 20-107 (116)
374 2i3y_A Epididymal secretory gl 98.6 4.4E-07 1.5E-11 79.9 13.4 107 33-142 40-211 (215)
375 2p31_A CL683, glutathione pero 98.6 1E-07 3.6E-12 82.0 8.8 90 392-482 48-180 (181)
376 3me7_A Putative uncharacterize 98.6 4.9E-07 1.7E-11 76.8 12.9 111 33-143 13-163 (170)
377 3ztl_A Thioredoxin peroxidase; 98.6 2.6E-07 9E-12 82.2 11.4 92 46-139 67-195 (222)
378 1xvw_A Hypothetical protein RV 98.6 1E-07 3.4E-12 80.2 8.1 87 394-481 37-158 (160)
379 2v1m_A Glutathione peroxidase; 98.6 1.1E-07 3.7E-12 80.8 8.1 91 392-483 30-167 (169)
380 2f8a_A Glutathione peroxidase 98.6 1.9E-07 6.6E-12 82.1 9.5 91 392-483 46-207 (208)
381 2bmx_A Alkyl hydroperoxidase C 98.6 7.7E-08 2.6E-12 84.0 6.8 90 393-483 45-170 (195)
382 2obi_A PHGPX, GPX-4, phospholi 98.5 1.8E-07 6E-12 80.7 8.3 89 392-481 46-182 (183)
383 1we0_A Alkyl hydroperoxide red 98.5 8.1E-08 2.8E-12 83.2 5.9 90 393-483 31-157 (187)
384 1xvq_A Thiol peroxidase; thior 98.5 3.9E-07 1.3E-11 77.9 10.1 89 33-126 29-147 (175)
385 2r37_A Glutathione peroxidase 98.5 7.9E-07 2.7E-11 77.9 12.2 106 33-141 22-192 (207)
386 1zof_A Alkyl hydroperoxide-red 98.5 5.8E-08 2E-12 85.0 4.7 90 392-482 32-160 (198)
387 3gyk_A 27KDA outer membrane pr 98.5 5E-07 1.7E-11 77.2 10.0 85 47-141 21-172 (175)
388 1ego_A Glutaredoxin; electron 98.5 3.8E-08 1.3E-12 73.0 2.4 75 397-482 3-83 (85)
389 1eej_A Thiol:disulfide interch 98.5 4E-07 1.4E-11 80.7 9.1 83 47-140 85-209 (216)
390 4g2e_A Peroxiredoxin; redox pr 98.5 2.1E-07 7E-12 78.0 6.8 105 33-139 15-155 (157)
391 3ixr_A Bacterioferritin comigr 98.5 1E-06 3.5E-11 75.5 11.2 105 33-139 36-175 (179)
392 2l4c_A Endoplasmic reticulum r 98.4 1.1E-06 3.7E-11 69.8 9.8 98 30-140 20-122 (124)
393 2c0d_A Thioredoxin peroxidase 98.4 8.9E-07 3E-11 78.5 10.1 93 47-141 55-183 (221)
394 2a4v_A Peroxiredoxin DOT5; yea 98.4 5.5E-07 1.9E-11 75.6 8.3 86 41-130 28-139 (159)
395 3kij_A Probable glutathione pe 98.4 8.5E-07 2.9E-11 76.1 9.6 91 392-483 37-170 (180)
396 1t3b_A Thiol:disulfide interch 98.4 9.3E-07 3.2E-11 77.9 9.2 82 47-139 85-208 (211)
397 1qmv_A Human thioredoxin perox 98.4 6E-07 2.1E-11 78.3 7.7 90 392-482 33-162 (197)
398 1v58_A Thiol:disulfide interch 98.4 1.4E-06 4.8E-11 78.4 10.3 89 47-141 96-232 (241)
399 2gs3_A PHGPX, GPX-4, phospholi 98.4 7.7E-07 2.6E-11 76.8 8.0 89 392-481 48-184 (185)
400 3a2v_A Probable peroxiredoxin; 98.4 7.9E-07 2.7E-11 79.9 8.1 98 42-141 27-161 (249)
401 1n8j_A AHPC, alkyl hydroperoxi 98.4 2.9E-06 9.8E-11 73.2 11.1 93 47-141 29-155 (186)
402 1xzo_A BSSCO, hypothetical pro 98.3 1.5E-06 5.2E-11 74.0 8.8 93 392-484 32-173 (174)
403 1psq_A Probable thiol peroxida 98.3 3.2E-06 1.1E-10 71.1 10.7 102 34-139 28-162 (163)
404 1uul_A Tryparedoxin peroxidase 98.3 6.3E-07 2.1E-11 78.6 6.3 89 393-482 36-164 (202)
405 2pn8_A Peroxiredoxin-4; thiore 98.3 2.3E-06 8E-11 75.3 9.9 93 47-141 47-176 (211)
406 4gqc_A Thiol peroxidase, perox 98.3 2.4E-07 8.1E-12 78.2 3.1 99 41-141 26-159 (164)
407 1zye_A Thioredoxin-dependent p 98.3 1.1E-06 3.7E-11 78.1 7.0 89 393-482 56-184 (220)
408 2i81_A 2-Cys peroxiredoxin; st 98.3 1.1E-06 3.8E-11 77.5 6.9 90 392-482 51-179 (213)
409 3p7x_A Probable thiol peroxida 98.3 3.6E-06 1.2E-10 71.1 9.8 102 33-139 31-165 (166)
410 3h93_A Thiol:disulfide interch 98.3 2.8E-06 9.6E-11 73.7 9.2 89 47-141 24-183 (192)
411 2yzh_A Probable thiol peroxida 98.3 2.5E-06 8.5E-11 72.5 8.7 103 34-140 33-170 (171)
412 3qpm_A Peroxiredoxin; oxidored 98.3 3.9E-06 1.3E-10 75.4 10.2 93 46-140 75-204 (240)
413 2h01_A 2-Cys peroxiredoxin; th 98.3 7.6E-07 2.6E-11 77.3 5.4 90 392-482 30-158 (192)
414 2b7k_A SCO1 protein; metalloch 98.3 6.4E-07 2.2E-11 78.4 4.7 97 392-488 40-184 (200)
415 3hd5_A Thiol:disulfide interch 98.2 5.9E-06 2E-10 71.8 10.7 44 46-92 23-66 (195)
416 4hde_A SCO1/SENC family lipopr 98.2 1.1E-05 3.7E-10 68.3 11.6 108 33-140 17-168 (170)
417 1q98_A Thiol peroxidase, TPX; 98.2 5.1E-06 1.8E-10 70.0 9.5 89 34-126 29-148 (165)
418 3ztl_A Thioredoxin peroxidase; 98.2 2.9E-06 9.9E-11 75.4 8.0 89 392-481 68-196 (222)
419 2jsy_A Probable thiol peroxida 98.2 3.4E-06 1.2E-10 71.3 7.8 88 392-482 43-166 (167)
420 1kte_A Thioltransferase; redox 98.2 9.1E-07 3.1E-11 68.4 3.8 73 40-123 4-81 (105)
421 3gyk_A 27KDA outer membrane pr 98.2 1E-06 3.5E-11 75.2 4.5 83 392-482 21-172 (175)
422 1nm3_A Protein HI0572; hybrid, 98.2 8.7E-06 3E-10 73.4 10.8 90 47-139 32-164 (241)
423 1eej_A Thiol:disulfide interch 98.2 1.1E-06 3.6E-11 77.9 4.3 82 392-482 85-210 (216)
424 1r7h_A NRDH-redoxin; thioredox 98.2 4.2E-06 1.4E-10 59.9 6.8 69 52-138 3-74 (75)
425 1xvq_A Thiol peroxidase; thior 98.2 4.8E-06 1.6E-10 71.0 8.0 85 392-480 43-165 (175)
426 3gkn_A Bacterioferritin comigr 98.1 4.1E-06 1.4E-10 70.5 7.2 89 393-482 35-161 (163)
427 1h75_A Glutaredoxin-like prote 98.1 2E-06 7E-11 62.8 4.6 72 52-139 3-75 (81)
428 1t3b_A Thiol:disulfide interch 98.1 1.8E-06 6E-11 76.1 4.9 81 392-481 85-209 (211)
429 3zrd_A Thiol peroxidase; oxido 98.1 1.6E-05 5.3E-10 69.3 10.9 88 34-125 64-182 (200)
430 1r7h_A NRDH-redoxin; thioredox 98.1 1.6E-06 5.5E-11 62.2 3.8 69 397-479 3-74 (75)
431 3tjj_A Peroxiredoxin-4; thiore 98.1 8E-06 2.7E-10 73.9 8.9 92 46-139 89-217 (254)
432 1h75_A Glutaredoxin-like prote 98.1 8E-07 2.7E-11 65.0 1.7 72 397-482 3-77 (81)
433 2wfc_A Peroxiredoxin 5, PRDX5; 98.1 1E-05 3.4E-10 68.3 8.8 45 47-93 30-77 (167)
434 1tp9_A Peroxiredoxin, PRX D (t 98.1 8.6E-06 3E-10 68.4 8.3 79 46-127 33-146 (162)
435 1v58_A Thiol:disulfide interch 98.1 3.7E-06 1.3E-10 75.7 5.9 87 392-482 96-232 (241)
436 2hze_A Glutaredoxin-1; thiored 98.0 1E-06 3.5E-11 69.2 1.4 90 39-139 10-107 (114)
437 2i3y_A Epididymal secretory gl 98.0 3.5E-05 1.2E-09 67.7 11.0 91 392-484 55-212 (215)
438 3mng_A Peroxiredoxin-5, mitoch 98.0 2.9E-05 9.8E-10 65.8 9.2 100 36-137 30-170 (173)
439 2ec4_A FAS-associated factor 1 98.0 6.5E-05 2.2E-09 63.5 11.2 94 45-141 52-167 (178)
440 3uma_A Hypothetical peroxiredo 98.0 3.7E-05 1.3E-09 65.8 9.8 88 47-137 55-181 (184)
441 1prx_A HORF6; peroxiredoxin, h 97.9 6E-05 2.1E-09 66.8 10.9 90 50-141 34-168 (224)
442 3hz8_A Thiol:disulfide interch 97.9 6.6E-05 2.3E-09 64.9 10.8 43 47-92 23-65 (193)
443 2ht9_A Glutaredoxin-2; thiored 97.9 5.8E-06 2E-10 67.8 3.7 87 39-139 40-134 (146)
444 3bj5_A Protein disulfide-isome 97.9 0.00018 6.1E-09 59.0 12.4 113 31-146 14-131 (147)
445 2cq9_A GLRX2 protein, glutared 97.9 5.2E-06 1.8E-10 66.8 3.1 88 39-140 18-113 (130)
446 4dvc_A Thiol:disulfide interch 97.9 8.4E-05 2.9E-09 63.6 10.8 89 47-141 20-181 (184)
447 2c0d_A Thioredoxin peroxidase 97.9 1.7E-05 6E-10 70.1 6.5 90 392-482 55-183 (221)
448 2v2g_A Peroxiredoxin 6; oxidor 97.9 7.9E-05 2.7E-09 66.3 10.4 93 47-141 27-164 (233)
449 3ixr_A Bacterioferritin comigr 97.8 4.3E-05 1.5E-09 65.3 8.2 89 393-482 51-177 (179)
450 3a2v_A Probable peroxiredoxin; 97.8 1.9E-05 6.6E-10 70.8 5.9 89 393-482 33-161 (249)
451 2hze_A Glutaredoxin-1; thiored 97.8 1.6E-06 5.4E-11 68.1 -1.5 80 394-480 18-107 (114)
452 3h93_A Thiol:disulfide interch 97.8 1.1E-05 3.7E-10 69.9 3.7 43 392-436 24-66 (192)
453 2a4v_A Peroxiredoxin DOT5; yea 97.8 3.9E-05 1.3E-09 64.1 7.0 86 394-482 36-153 (159)
454 2r37_A Glutathione peroxidase 97.8 0.00012 4.2E-09 63.9 10.3 90 392-483 37-193 (207)
455 1kte_A Thioltransferase; redox 97.8 2.6E-06 8.8E-11 65.8 -0.4 78 396-480 13-100 (105)
456 3me7_A Putative uncharacterize 97.8 0.00019 6.4E-09 60.6 10.9 93 393-485 28-164 (170)
457 2pn8_A Peroxiredoxin-4; thiore 97.8 5.4E-05 1.8E-09 66.5 7.6 89 393-482 48-176 (211)
458 1n8j_A AHPC, alkyl hydroperoxi 97.8 5.7E-05 1.9E-09 64.9 7.6 89 393-482 30-155 (186)
459 1xcc_A 1-Cys peroxiredoxin; un 97.8 7.4E-05 2.5E-09 66.0 8.4 90 50-141 34-165 (220)
460 1z6m_A Conserved hypothetical 97.7 0.00022 7.7E-09 60.5 10.9 83 47-138 26-174 (175)
461 2znm_A Thiol:disulfide interch 97.7 0.00011 3.9E-09 63.5 9.2 42 47-91 21-62 (195)
462 2pwj_A Mitochondrial peroxired 97.7 2.1E-05 7.1E-10 66.6 4.2 69 47-119 42-115 (171)
463 3ic4_A Glutaredoxin (GRX-1); s 97.7 6.9E-05 2.3E-09 56.0 6.6 71 52-138 14-91 (92)
464 2yzh_A Probable thiol peroxida 97.7 0.00015 5.1E-09 61.3 9.5 85 393-481 47-170 (171)
465 1fov_A Glutaredoxin 3, GRX3; a 97.7 0.0002 6.8E-09 52.0 8.8 70 52-139 3-74 (82)
466 4g2e_A Peroxiredoxin; redox pr 97.7 2.1E-05 7.3E-10 65.6 3.7 88 393-481 30-156 (157)
467 2lqo_A Putative glutaredoxin R 97.7 3.3E-05 1.1E-09 57.4 4.1 75 396-483 5-84 (92)
468 3feu_A Putative lipoprotein; a 97.7 0.00012 4E-09 62.8 8.0 30 48-77 22-51 (185)
469 4gqc_A Thiol peroxidase, perox 97.7 7.7E-06 2.6E-10 68.8 0.5 92 391-483 31-160 (164)
470 3gv1_A Disulfide interchange p 97.6 0.00018 6.1E-09 58.8 8.4 84 46-142 12-139 (147)
471 1un2_A DSBA, thiol-disulfide i 97.6 1.7E-05 5.8E-10 68.7 2.2 45 47-94 112-159 (197)
472 3c1r_A Glutaredoxin-1; oxidize 97.6 3E-05 1E-09 61.1 3.3 65 40-112 17-87 (118)
473 3qpm_A Peroxiredoxin; oxidored 97.6 0.00015 5E-09 65.1 8.2 88 393-481 77-204 (240)
474 2rem_A Disulfide oxidoreductas 97.6 0.00043 1.5E-08 59.7 10.9 42 47-91 24-65 (193)
475 3l9v_A Putative thiol-disulfid 97.6 0.00014 4.8E-09 62.6 7.4 42 48-92 14-58 (189)
476 2lqo_A Putative glutaredoxin R 97.6 0.00027 9.1E-09 52.4 7.6 77 51-142 5-84 (92)
477 3ic4_A Glutaredoxin (GRX-1); s 97.5 2.7E-05 9.4E-10 58.2 2.1 69 397-479 14-91 (92)
478 2cq9_A GLRX2 protein, glutared 97.5 1.1E-05 3.6E-10 64.9 -0.4 87 382-481 17-113 (130)
479 4hde_A SCO1/SENC family lipopr 97.5 0.001 3.6E-08 56.0 11.9 91 392-482 31-169 (170)
480 2klx_A Glutaredoxin; thioredox 97.5 0.00011 3.9E-09 54.4 5.2 53 52-113 8-61 (89)
481 1psq_A Probable thiol peroxida 97.5 0.00027 9.3E-09 59.1 8.0 86 392-480 41-162 (163)
482 3c1r_A Glutaredoxin-1; oxidize 97.5 1.4E-05 4.8E-10 63.0 -0.3 52 397-453 27-86 (118)
483 3nzn_A Glutaredoxin; structura 97.5 0.00021 7.1E-09 54.6 6.4 73 50-137 22-101 (103)
484 3msz_A Glutaredoxin 1; alpha-b 97.5 0.00025 8.5E-09 52.4 6.7 75 51-141 5-86 (89)
485 3keb_A Probable thiol peroxida 97.4 0.0007 2.4E-08 59.3 10.1 102 33-141 33-175 (224)
486 2yan_A Glutaredoxin-3; oxidore 97.4 0.00012 4.1E-09 56.2 4.5 63 40-113 9-78 (105)
487 1nm3_A Protein HI0572; hybrid, 97.4 0.00022 7.6E-09 64.0 6.8 88 392-481 32-165 (241)
488 2ec4_A FAS-associated factor 1 97.4 0.00043 1.5E-08 58.4 7.9 93 390-484 52-169 (178)
489 3tjj_A Peroxiredoxin-4; thiore 97.4 0.00021 7.1E-09 64.5 6.2 88 393-481 91-218 (254)
490 3rhb_A ATGRXC5, glutaredoxin-C 97.4 0.00015 5E-09 56.6 4.6 63 40-113 11-79 (113)
491 3nzn_A Glutaredoxin; structura 97.4 0.00011 3.9E-09 56.1 3.7 73 393-478 20-101 (103)
492 3qmx_A Glutaredoxin A, glutare 97.4 7.2E-05 2.5E-09 56.7 2.5 53 393-453 14-71 (99)
493 3p7x_A Probable thiol peroxida 97.3 0.0003 1E-08 59.1 6.3 84 393-480 46-165 (166)
494 3gv1_A Disulfide interchange p 97.3 0.00017 5.7E-09 59.0 3.9 82 391-483 12-139 (147)
495 1wik_A Thioredoxin-like protei 97.3 0.0003 1E-08 54.3 5.2 64 38-112 5-75 (109)
496 3qmx_A Glutaredoxin A, glutare 97.3 0.00039 1.3E-08 52.6 5.4 56 49-113 15-73 (99)
497 2khp_A Glutaredoxin; thioredox 97.3 0.00053 1.8E-08 51.0 6.2 52 52-112 8-61 (92)
498 3l9s_A Thiol:disulfide interch 97.2 0.00082 2.8E-08 57.8 7.8 40 48-90 21-63 (191)
499 2ht9_A Glutaredoxin-2; thiored 97.2 9.8E-05 3.3E-09 60.4 1.9 86 383-481 40-135 (146)
500 2klx_A Glutaredoxin; thioredox 97.2 6.1E-05 2.1E-09 55.9 0.4 51 396-454 7-60 (89)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=8.8e-64 Score=506.67 Aligned_cols=441 Identities=35% Similarity=0.667 Sum_probs=398.6
Q ss_pred CceEEcCccChhhhhccC---CeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 31 EFVLTLDHSNFSDTVSKH---NFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~---~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
+.|..|++++|+..+.++ ++++|+||++||++|+++.|.|+++++.+.+. +.++.|||+.+.. +|++|+|++
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~ 75 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI---VPLAKVDCTANTN--TCNKYGVSG 75 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CCEEEEETTTCHH--HHHHTTCCE
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc---eEEEEEECCCCHH--HHHhcCCCC
Confidence 357899999999999887 99999999999999999999999999999875 9999999999888 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHh
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKL 187 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~ 187 (500)
+||+++|++| +.+.+|.|.++.+.|.+|+.+.++|.+.++++.++++++++.+...++++|.+.++...+.|.++|..+
T Consensus 76 ~Ptl~~~~~g-~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~ 154 (481)
T 3f8u_A 76 YPTLKIFRDG-EEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNL 154 (481)
T ss_dssp ESEEEEEETT-EEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC-ceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHh
Confidence 9999999976 678899999999999999999999999999999999999999999999999988999999999999999
Q ss_pred cCCceEEEeecccccCCCCCCCCCCeEEEec------cCCCcc-ccc-CCCCHHHHHHHHHHccCCcEEEeCCCCCCccc
Q 010804 188 RSDYEFGHTQNAKLLPRGESSVTGPVVRLFK------PFDELF-VDF-KDFKVDALEKFVEESSIPIVTVFNSDANNHPF 259 (500)
Q Consensus 188 ~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~-~~~-~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~ 259 (500)
++++.|+.+.+.+++++ ++++.+.+++|+ ..+... .|. |.++.++|.+||..+++|++++++. .|
T Consensus 155 ~~~~~F~~~~~~~~~~~--~~v~~~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~-----~n 227 (481)
T 3f8u_A 155 RDNYRFAHTNVESLVNE--YDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-----DN 227 (481)
T ss_dssp TTTSCEEEECCHHHHHH--HCSSSEEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT-----TT
T ss_pred ccCceEEEECCHHHHHH--hCCCCCcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccCh-----hH
Confidence 99999999999999999 888888899999 444444 777 8899999999999999999999999 68
Q ss_pred hhhhhcCCCceEEEEEeCCCCCc----hHHHHHHHHHHHhhcCce--eEEEEEcccchhhHHhhcCCC--CCCCceEEEE
Q 010804 260 VIKFFNSPNAKAMLFMNFSSEGT----EPIQSKYREVAEQYKGQG--ISFLLGDLEASQGAFQYFGLQ--ESQVPLIVIQ 331 (500)
Q Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~l~~va~~~~~~~--~~f~~~d~~~~~~~~~~~gi~--~~~~P~i~i~ 331 (500)
...++.. +++++|+..+.... +.+.+.++++|.+|+++. +.|+++|+..++..++.||++ ..+.|.++++
T Consensus 228 ~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~ 305 (481)
T 3f8u_A 228 KDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIR 305 (481)
T ss_dssp HHHHTTS--SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEE
T ss_pred HHHhcCC--CceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEE
Confidence 8888754 55555555433332 236788999999998864 999999999999999999998 4589999999
Q ss_pred eCCCCcc-CCCCCChh--hHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhH
Q 010804 332 TNDGQKY-LKPNLDAD--QIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHC 408 (500)
Q Consensus 332 ~~~~~~y-~~~~~~~~--~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c 408 (500)
+.++.+| +.++++.+ .|.+|++++++|+++++++|+++|+.....+..+++++|+..+.+.+++++|+||++||++|
T Consensus 306 ~~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C 385 (481)
T 3f8u_A 306 TAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHC 385 (481)
T ss_dssp CSSSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHH
T ss_pred cCCCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhH
Confidence 9666788 88899999 99999999999999999999999988888899999999999997779999999999999999
Q ss_pred hhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCc--eEEecCCCCHHHHHHHHHhhcCCCC
Q 010804 409 KKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~--~~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
+.+.|.|.+++..+++..++.++++|++.+ .+++++++.++|++++|++|++ +.+|.|.++.++|.+||+++++.+.
T Consensus 386 ~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~ 464 (481)
T 3f8u_A 386 KNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPP 464 (481)
T ss_dssp HHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCC
T ss_pred HHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCcc
Confidence 999999999999998766899999999998 5666799999999999998887 7899999999999999999987654
Q ss_pred C
Q 010804 487 P 487 (500)
Q Consensus 487 ~ 487 (500)
.
T Consensus 465 ~ 465 (481)
T 3f8u_A 465 V 465 (481)
T ss_dssp C
T ss_pred c
Confidence 3
No 2
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=4.6e-61 Score=489.10 Aligned_cols=434 Identities=31% Similarity=0.570 Sum_probs=391.4
Q ss_pred cccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 28 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 28 ~~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
...+.|..|++++|+.+++++++++|+||++||+||+++.|.|+++++.+++. ++.++.|||+.+.. +|++|+|++
T Consensus 11 ~~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~~--l~~~~~v~~ 86 (504)
T 2b5e_A 11 PEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQD--LCMEHNIPG 86 (504)
T ss_dssp CTTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCHH--HHHHTTCCS
T ss_pred CCCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCHH--HHHhcCCCc
Confidence 34567999999999999999999999999999999999999999999999763 49999999999988 999999999
Q ss_pred ccEEEEEecCCce--eeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCC--eEEEEEecCCCchhHHHHHHH
Q 010804 108 FPTIKILRNGGKT--IQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKK--VVIIGVFPNFSGEEFENYTAL 183 (500)
Q Consensus 108 ~P~~~~~~~~~~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~f~~~ 183 (500)
+||+++|++| +. ..+|.|.++.+.|.+|+.+.+++++.++++ ++++++.+. ..++++|.+.++..+..|.++
T Consensus 87 ~Pt~~~~~~g-~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~ 162 (504)
T 2b5e_A 87 FPSLKIFKNS-DVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSM 162 (504)
T ss_dssp SSEEEEEETT-CTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHH
T ss_pred CCEEEEEeCC-ccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHH
Confidence 9999999986 44 789999999999999999999999999977 888888877 889999998888999999999
Q ss_pred HHHhcCCceEEEeecccccCCCCCCCCCCeEEEeccCCCcccccCC-C---CHHHHHHHHHHccCCcEEEeCCCCCCccc
Q 010804 184 AEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFKPFDELFVDFKD-F---KVDALEKFVEESSIPIVTVFNSDANNHPF 259 (500)
Q Consensus 184 a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~---~~~~l~~~i~~~~~p~~~~~~~~~~~~~~ 259 (500)
|..+++++.|+.+. +++++ ++++ +++|+..+....|.|+ + +.++|.+||..+++|.+++++. .+
T Consensus 163 A~~~~~~~~F~~~~--~~~~~--~~~~---i~l~~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~-----~~ 230 (504)
T 2b5e_A 163 ANKHFNDYDFVSAE--NADDD--FKLS---IYLPSAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDG-----SV 230 (504)
T ss_dssp HHHTTTTCEEEEEE--CTTSC--CEEE---EEETTEEEEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCH-----HH
T ss_pred HHHhhcCcEEEEEH--HHHHh--cCCe---EEecCCCCcccccCCcccccCCHHHHHHHHHhcccCCcccCCH-----hH
Confidence 99999999999887 67777 5554 8888886644488898 7 8999999999999999999999 79
Q ss_pred hhhhhcCCCceEEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCC-Ccc
Q 010804 260 VIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDG-QKY 338 (500)
Q Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~-~~y 338 (500)
+..++..+.++++++++.+ +..+.+...++++|.+|+++ +.|+|+|+..++.+++.||+ ..+.|.+++++... .+|
T Consensus 231 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~a~~~~~~-i~F~~id~~~~~~~~~~~gl-~~~~P~v~i~~~~~~~ky 307 (504)
T 2b5e_A 231 FAQYVESGLPLGYLFYNDE-EELEEYKPLFTELAKKNRGL-MNFVSIDARKFGRHAGNLNM-KEQFPLFAIHDMTEDLKY 307 (504)
T ss_dssp HHHHHHTTSCEEEEEESSH-HHHHHHHHHHHHHHHHTTTT-CEEEEEEHHHHTTHHHHTTC-CSCSSEEEEEETTTTEEE
T ss_pred HHHHhcCCCcEEEEEecCc-ccHHHHHHHHHHHHHhcCCe-eEEEEEehhhhHHHHHHcCC-cccCCEEEEEeCCcCccc
Confidence 9999999999999888643 23378999999999999999 99999999999999999999 77999999999855 677
Q ss_pred -CC--CC-----------CChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCC
Q 010804 339 -LK--PN-----------LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPW 404 (500)
Q Consensus 339 -~~--~~-----------~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~ 404 (500)
+. ++ ++.+.+..|+.++..|++.+..+|+++|+...+.+..+++++|+..+.+.+++++|+||++|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~w 387 (504)
T 2b5e_A 308 GLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPW 387 (504)
T ss_dssp ECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTT
T ss_pred CCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCC
Confidence 55 55 89999999999999999999999999998777889999999999999888999999999999
Q ss_pred ChhHhhhhHHHHHHHHHcC-CCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCc--eEEecCCCCHHHHHHHHHhh
Q 010804 405 CGHCKKLAPILDEVAVSYQ-NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 405 c~~c~~~~~~~~~~~~~~~-~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~--~~~~~g~~~~~~l~~~i~~~ 481 (500)
|++|+.+.|.|.+++..+. ...++.++.+|++.++.. . +++.++||+++|+.|++ +.+|.|.++.++|.+||+++
T Consensus 388 C~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 388 CGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHH
T ss_pred ChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhc
Confidence 9999999999999999886 445799999999998866 4 99999999999987766 77899999999999999999
Q ss_pred cCCCC
Q 010804 482 RDKAA 486 (500)
Q Consensus 482 ~~~~~ 486 (500)
+..+.
T Consensus 466 ~~~~~ 470 (504)
T 2b5e_A 466 GHFDV 470 (504)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87544
No 3
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=5.8e-48 Score=412.98 Aligned_cols=417 Identities=17% Similarity=0.266 Sum_probs=351.0
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+.|..|+.++|+..++++++++|+||++||++|+.+.|.|+++++.+.+. +.++.|||+.++. +|++|+|.++
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~ 188 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGL---LRIGAVNCGDDRM--LCRMKGVNSY 188 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCSS--CC--------
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCc---eEEEEEeCCCcHH--HHHHcCCcee
Confidence 3457899999999999999999999999999999999999999999999765 9999999999998 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCCh---hhHhhhhccCCeEEEEEecCCC-chhHHHHHHHH
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSA---EDASSFIGEKKVVIIGVFPNFS-GEEFENYTALA 184 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~---~~~~~~~~~~~~~~i~~~~~~~-~~~~~~f~~~a 184 (500)
||+++|++| +...+|.|.++.+.|.+|+.+.+++.+.++++. +++.+++..+...+++|+.... ......+.+++
T Consensus 189 Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~ 267 (780)
T 3apo_A 189 PSLFIFRSG-MAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLS 267 (780)
T ss_dssp CEEEEECTT-SCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHH
T ss_pred eeEEEEeCC-cEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHH
Confidence 999999976 667899999999999999999999999999887 7888888887777777776543 23445555565
Q ss_pred HHhcCCceEEEe--------------------------------------------------------------------
Q 010804 185 EKLRSDYEFGHT-------------------------------------------------------------------- 196 (500)
Q Consensus 185 ~~~~~~~~f~~~-------------------------------------------------------------------- 196 (500)
..+++.+.|+.+
T Consensus 268 ~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~ 347 (780)
T 3apo_A 268 GMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLED 347 (780)
T ss_dssp HHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHH
T ss_pred HHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHH
Confidence 555554444443
Q ss_pred -----------------------------------------e---cccccCCCCCCCCCCeEEEeccCC-Ccc-cccCCC
Q 010804 197 -----------------------------------------Q---NAKLLPRGESSVTGPVVRLFKPFD-ELF-VDFKDF 230 (500)
Q Consensus 197 -----------------------------------------~---~~~~~~~~~~~~~~p~~~~~~~~~-~~~-~~~~~~ 230 (500)
. +..+++. ++++.|++++|+..+ +.. .+.|+.
T Consensus 348 ~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~--~~~~~p~i~l~~~~~~e~~~~~~g~~ 425 (780)
T 3apo_A 348 RLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSD--LYVFQPSLAVFKGQGTKEYEIHHGKK 425 (780)
T ss_dssp HHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHH--TTCCSCEEEEEESSTTSSEEECCSCC
T ss_pred HhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhh--ccccCChhhhccCCCcceeeecccHh
Confidence 2 2223334 566668999999876 334 788999
Q ss_pred CHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCceEEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccc
Q 010804 231 KVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEA 310 (500)
Q Consensus 231 ~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~ 310 (500)
+.++|.+|+..+..|.+..++. .++..+ .++++++.|....|..|......+.++|.+++++ +.|+.+|+..
T Consensus 426 ~~~~i~~f~~~~~~~~v~~l~~-----~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~ 497 (780)
T 3apo_A 426 ILYDILAFAKESVNSHVTTLGP-----QNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTI 497 (780)
T ss_dssp CHHHHHHHHHHHHTSCEEECCT-----TTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT
T ss_pred hHHHHHHHhhhccCCCCEecCH-----HHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCC
Confidence 9999999999999999999999 577776 6778888888878999999999999999999988 9999999999
Q ss_pred hhhHHhhcCCCCCCCceEEEEeCCCCcc-CCCCCChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhh
Q 010804 311 SQGAFQYFGLQESQVPLIVIQTNDGQKY-LKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMV 389 (500)
Q Consensus 311 ~~~~~~~~gi~~~~~P~i~i~~~~~~~y-~~~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~ 389 (500)
.+.+++.||+. ..|++++++. +..| +.|..+.+.|.+|++++++ +.+..|+.++|++++
T Consensus 498 ~~~~~~~~~v~--~~Pt~~~~~~-g~~~~~~g~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~f~~~v 557 (780)
T 3apo_A 498 HEGLCNMYNIQ--AYPTTVVFNQ-SSIHEYEGHHSAEQILEFIEDLRN-----------------PSVVSLTPSTFNELV 557 (780)
T ss_dssp CHHHHHHTTCC--SSSEEEEEET-TEEEEECSCSCHHHHHHHHHHHHS-----------------CSEEECCHHHHHHHT
T ss_pred CHHHHHHcCCC--cCCeEEEEcC-CceeeecCcccHHHHHHHHHhhcc-----------------cceeecCcccHHHHh
Confidence 99999999998 7999999965 4347 7899999999999999985 238889999999998
Q ss_pred hcC--CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCc----eE
Q 010804 390 FNS--GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK----TV 463 (500)
Q Consensus 390 ~~~--~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~----~~ 463 (500)
.+. ++.++|.||+|||++|+.+.|.|.+++..+++ ++.|+.+|++.+..+++++++.++|++++|+.|.. ..
T Consensus 558 ~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~ 635 (780)
T 3apo_A 558 KQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYH 635 (780)
T ss_dssp TTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCE
T ss_pred hccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchh
Confidence 653 56789999999999999999999999999986 69999999999988888899999999999987754 67
Q ss_pred EecC-CCCHHHHHHHHHhhcC
Q 010804 464 PYEG-DRTKEDIVDFIENNRD 483 (500)
Q Consensus 464 ~~~g-~~~~~~l~~~i~~~~~ 483 (500)
.|.| .++.++|.+||++...
T Consensus 636 ~y~g~~~~~~~l~~fi~~~~~ 656 (780)
T 3apo_A 636 SYNGWNRDAYSLRSWGLGFLP 656 (780)
T ss_dssp ECCCSCCSHHHHHHHHHTTSC
T ss_pred hcCCCCCCHHHHHHHHhhhcc
Confidence 8999 8999999999998874
No 4
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-45 Score=358.10 Aligned_cols=354 Identities=21% Similarity=0.380 Sum_probs=273.5
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCC---CCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSH---DPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~---~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
.+.|..|++++|+.++.++++++|+||++||+||+++.|.|+++++.+++. ++++.++.|||+.+.. +|++|+|+
T Consensus 4 ~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~--l~~~~~v~ 81 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD--IAQRYRIS 81 (382)
T ss_dssp ----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH--HHHHTTCC
T ss_pred CCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH--HHHhcCCC
Confidence 345888999999999999999999999999999999999999999999643 2349999999999888 99999999
Q ss_pred cccEEEEEecCCceee-ecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHH
Q 010804 107 GFPTIKILRNGGKTIQ-EYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAE 185 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~ 185 (500)
++||+++|++| +... .|.|.++.+.|.+|+.+.+++++..+++.++++. +..+...++++|.+...+.++.|.++|.
T Consensus 82 ~~Pt~~~f~~G-~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~ 159 (382)
T 2r2j_A 82 KYPTLKLFRNG-MMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVAN 159 (382)
T ss_dssp EESEEEEEETT-EEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCC-cEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHH
Confidence 99999999976 5544 6999999999999999999999999988888988 6778888999998888888999999999
Q ss_pred HhcCCceEEEeecccccCCCCCCCCCCeEEEeccCC--C-cccccCCC-CHHHHHHHHHHccCCcEEEeCCCCCCccchh
Q 010804 186 KLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFKPFD--E-LFVDFKDF-KVDALEKFVEESSIPIVTVFNSDANNHPFVI 261 (500)
Q Consensus 186 ~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~-~~~~~~~~-~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~ 261 (500)
.+++++.|+.+.+ ++.+. ++++... ++|+..+ . ...|.|++ +.++|.+||..++.|.+.+++. .++.
T Consensus 160 ~~~~~~~F~~~~~-~~~~~--~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~-----~~~~ 230 (382)
T 2r2j_A 160 ILHDDCAFLSAFG-DVSKP--ERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITF-----ENGE 230 (382)
T ss_dssp HHTTTCEEEEEES-CC----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCH-----HHHH
T ss_pred HhhccceEEEEeh-hhHHh--hCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecCh-----hhHH
Confidence 9999999999988 56666 6676544 6666642 2 23899999 8999999999999999999999 7899
Q ss_pred hhhcCCCceEEEEEeCCCCC-chHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCcc-C
Q 010804 262 KFFNSPNAKAMLFMNFSSEG-TEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQKY-L 339 (500)
Q Consensus 262 ~~~~~~~~~~~l~~~~~~~~-~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~y-~ 339 (500)
.++..+.+++++|+..++.. .+.+.+.+.+++.+++++ +.|+|+|+..++.++..||++..+.|.++|.+.+. .| +
T Consensus 231 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~-i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~-~y~~ 308 (382)
T 2r2j_A 231 ELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGT-INFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRH-MYVF 308 (382)
T ss_dssp HHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTT-SEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSC-EEEC
T ss_pred HHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCe-eEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchh-cCCC
Confidence 99999999999998765422 366777888888899988 99999999999999999999987899999988644 34 3
Q ss_pred C---CCCChhhHHHHHHHHhcCCCCCccccCCCCCCC------CCCeEEEeccchhhhhhcCCCeEEE
Q 010804 340 K---PNLDADQIAPWVKEYKEGKVPPFRKSEPIPEEN------NEPVKVLVADSLQDMVFNSGKNVLL 398 (500)
Q Consensus 340 ~---~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~v 398 (500)
. +.++.+.|.+|++++++|+++|+++|+++|+.+ ...+.....++|+++.-..++.+++
T Consensus 309 ~~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~~~~~~~~~~~~~~~s~f~~l~~~~~~~~~~ 376 (382)
T 2r2j_A 309 GDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLL 376 (382)
T ss_dssp CCSGGGGSTTHHHHHHHHHHHTTTSSCC-------------------CCCCCCSGGGGSCCTTTCEEC
T ss_pred CccccccCHHHHHHHHHHHHCCCccccccCCCCCCCCCcccccccCCCCCCcccccccCCCccceecc
Confidence 2 456889999999999999999999999999854 2223445677788776444555554
No 5
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=3.2e-44 Score=349.77 Aligned_cols=339 Identities=31% Similarity=0.590 Sum_probs=306.6
Q ss_pred HHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCCceEEEeecccccCCCCCCCCCCeEE
Q 010804 136 YLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVR 215 (500)
Q Consensus 136 ~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~ 215 (500)
++....++.+.+|++.++++++++.+.+++|+||.+.++...+.|.++|+.+ +++.|+++.+.+++++ ++++.|+++
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~-~~~~F~~t~~~~v~~~--~~v~~~~i~ 86 (361)
T 3uem_A 10 LFQGPGSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAI-DDIPFGITSNSDVFSK--YQLDKDGVV 86 (361)
T ss_dssp GTSCCCCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHC-SSSCEEEECCHHHHHH--TTCSSSEEE
T ss_pred EecCCccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcC-CCceEEEECcHHHHHH--hCCCCCeEE
Confidence 3444466778999999999999999999999999999999999999999998 8899999999999999 889999999
Q ss_pred EeccCCCcc-cccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCce-EEEEEeCCCCCchHHHHHHHHHH
Q 010804 216 LFKPFDELF-VDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAK-AMLFMNFSSEGTEPIQSKYREVA 293 (500)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~l~~va 293 (500)
+|+..++.. .|.|+++.++|.+||..++.|.+.++++ .++..++..+.+. +++|+...+..++.+...++++|
T Consensus 87 lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-----~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A 161 (361)
T 3uem_A 87 LFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-----QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAA 161 (361)
T ss_dssp EEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECST-----TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHH
T ss_pred EEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCc-----ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHH
Confidence 999977666 8999999999999999999999999999 6888888877654 56788888999999999999999
Q ss_pred HhhcCceeEEEEEccc--chhhHHhhcCCCCCCCceEEEEeCCC--Ccc-CC-CCCChhhHHHHHHHHhcCCCCCccccC
Q 010804 294 EQYKGQGISFLLGDLE--ASQGAFQYFGLQESQVPLIVIQTNDG--QKY-LK-PNLDADQIAPWVKEYKEGKVPPFRKSE 367 (500)
Q Consensus 294 ~~~~~~~~~f~~~d~~--~~~~~~~~~gi~~~~~P~i~i~~~~~--~~y-~~-~~~~~~~i~~fi~~~~~G~l~~~~~s~ 367 (500)
.+|+++ +.|+++|+. .++.+++.||+...+.|++++++.++ .+| +. +.++.+.|.+|++++++|++++.++|+
T Consensus 162 ~~~~~~-i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~ 240 (361)
T 3uem_A 162 ESFKGK-ILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQ 240 (361)
T ss_dssp GGGTTT-CEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCC
T ss_pred HHccCc-eEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCC
Confidence 999999 999999998 79999999999966799999999854 577 44 789999999999999999999999999
Q ss_pred CCCCC-CCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCC
Q 010804 368 PIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFE 446 (500)
Q Consensus 368 ~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~ 446 (500)
++|+. ....+..+++++|+..+.+.+++++|+||++||++|+.+.|.|.+++..+++..++.++.+|++.++ +++++
T Consensus 241 ~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~ 318 (361)
T 3uem_A 241 ELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVK 318 (361)
T ss_dssp CCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCC
T ss_pred CCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcC
Confidence 99974 7788999999999999988899999999999999999999999999999987667999999999887 56799
Q ss_pred cCcceEEEEEcCC--CceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 447 VQGYPTVFFRSAS--GKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 447 i~~~P~~~~~~~~--~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+.++|++++|++| ..+.+|.|.++.++|.+||+++.+..
T Consensus 319 v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 359 (361)
T 3uem_A 319 VHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 359 (361)
T ss_dssp CCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTSCSC
T ss_pred CcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcCCCC
Confidence 9999999999766 34789999999999999999887553
No 6
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=1.5e-44 Score=350.75 Aligned_cols=321 Identities=17% Similarity=0.235 Sum_probs=282.6
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhh------HHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHh
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLA------PEYEKAASELSSHDPPVVLAKVDANEEANKELASQ 102 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~------~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~ 102 (500)
..+.|..|++++|+++++++++++|+||+|||+||.... |.|+++++.+++. .+.++.|||+.++. +|++
T Consensus 11 ~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--~v~~~~Vd~~~~~~--l~~~ 86 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--GVGFGLVDSEKDAA--VAKK 86 (367)
T ss_dssp CCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTTHH--HHHH
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC--CceEEEEeCcccHH--HHHH
Confidence 356799999999999999999999999999999974333 6899999999753 49999999999888 9999
Q ss_pred cCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhc-cCCeEEEEEecCCCchhHHHHH
Q 010804 103 YEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIG-EKKVVIIGVFPNFSGEEFENYT 181 (500)
Q Consensus 103 ~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~f~ 181 (500)
|+|+++||+++|++| +. ..|.|.++.+.|.+|+.+.+++++..+++.++++++++ ++..++++||.+.++..++.|.
T Consensus 87 ~~V~~~PTl~~f~~G-~~-~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~ 164 (367)
T 3us3_A 87 LGLTEEDSIYVFKED-EV-IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFK 164 (367)
T ss_dssp HTCCSTTEEEEEETT-EE-EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHH
T ss_pred cCCCcCceEEEEECC-cE-EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHH
Confidence 999999999999976 44 69999999999999999999999999999999999999 7889999999988899999999
Q ss_pred HHHHHhcCCceEEEeecccccCCCCCCCCCCeEEEeccCCCcc-cccCC-CCHHHHHHHHHHccCCcEEEeCCCCCCccc
Q 010804 182 ALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFKPFDELF-VDFKD-FKVDALEKFVEESSIPIVTVFNSDANNHPF 259 (500)
Q Consensus 182 ~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~-~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~ 259 (500)
++|..+++++.|+.+.+.+++++ ++++.|++++|+..+... .|.|+ .+.++|.+||..++.|.+.+++. .+
T Consensus 165 ~~A~~~~~~~~F~~~~~~~~~~~--~~v~~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~-----~~ 237 (367)
T 3us3_A 165 EAAEEFHPYIPFFATFDSKVAKK--LTLKLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKP-----ES 237 (367)
T ss_dssp HHHHHHTTTSCEEEECCHHHHHH--HTCCTTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCG-----GG
T ss_pred HHHHhhcCCcEEEEECCHHHHHH--cCCCCCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecCh-----hh
Confidence 99999999999999999999998 888889999999965555 78885 89999999999999999999999 68
Q ss_pred hhhhhcC--CCceEEEEEeCCCCCchHHHHHHHHHHHhhcCc-eeEEEEEcccchhhHHh----hcCCCCCCCceEEEEe
Q 010804 260 VIKFFNS--PNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQ-GISFLLGDLEASQGAFQ----YFGLQESQVPLIVIQT 332 (500)
Q Consensus 260 ~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~-~~~f~~~d~~~~~~~~~----~~gi~~~~~P~i~i~~ 332 (500)
+..++.+ ..+.+++|++.++...+++.+.++++|++|+++ .+.|+|+|+..++..+. .||++ .+.|.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~-~~~P~~~i~~ 316 (367)
T 3us3_A 238 MYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDID-LSAPQIGVVN 316 (367)
T ss_dssp HHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCC-TTSCEEEEEE
T ss_pred HHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCC-CCCCeEEEEe
Confidence 7777664 346777788766666789999999999999983 29999999998887654 59998 4899999999
Q ss_pred CCCC---cc-CCC---CCChhhHHHHHHHHhcCCCCCc
Q 010804 333 NDGQ---KY-LKP---NLDADQIAPWVKEYKEGKVPPF 363 (500)
Q Consensus 333 ~~~~---~y-~~~---~~~~~~i~~fi~~~~~G~l~~~ 363 (500)
..+. +| +.+ .+|.++|.+|++++++|+++|.
T Consensus 317 ~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 317 VTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp TTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred cccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 8763 45 553 7999999999999999999975
No 7
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=2e-42 Score=334.72 Aligned_cols=317 Identities=19% Similarity=0.262 Sum_probs=278.8
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHH-------HHHHHHHhcCCCCCeEEEEEecChhhhHHHHH
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPE-------YEKAASELSSHDPPVVLAKVDANEEANKELAS 101 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~-------~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~ 101 (500)
..+.|..|++++|+..++++++++|+||++||+ |+.+.|. |+++++.+++. .+.++.|||+.++. +|+
T Consensus 9 ~~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~v~~~~Vd~~~~~~--l~~ 83 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--DIGFVMVDAKKEAK--LAK 83 (350)
T ss_dssp CCCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--SEEEEEEETTTTHH--HHH
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--CcEEEEEeCCCCHH--HHH
Confidence 346689999999999999999999999999999 9999898 99999999763 49999999999988 999
Q ss_pred hcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhc-cCCeEEEEEecCCCchhHHHH
Q 010804 102 QYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIG-EKKVVIIGVFPNFSGEEFENY 180 (500)
Q Consensus 102 ~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~f 180 (500)
+|+|+++||+++|++| + ..+|.|.++.+.|.+|+.+.+++++.++++.++++++++ ++...++++|.+.++...+.|
T Consensus 84 ~~~v~~~Pt~~~~~~g-~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~ 161 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGD-R-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAF 161 (350)
T ss_dssp HHTCCSTTEEEEEETT-E-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHH
T ss_pred hcCCCccceEEEEECC-c-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHH
Confidence 9999999999999876 4 679999999999999999999999999999999999998 788889999988888899999
Q ss_pred HHHHHHhcCCceEEEeecccccCCCCCCCCCCeEEEeccCCCcc-cccCC-CCHHHHHHHHHHccCCcEEEeCCCCCCcc
Q 010804 181 TALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFKPFDELF-VDFKD-FKVDALEKFVEESSIPIVTVFNSDANNHP 258 (500)
Q Consensus 181 ~~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~-~~~~~l~~~i~~~~~p~~~~~~~~~~~~~ 258 (500)
.++|..+++++.|+.+.+++++++ ++++.|++++|++.+... .|.|+ ++.++|.+||..++.|.+.+++. .
T Consensus 162 ~~~A~~~~~~~~f~~~~~~~~~~~--~~v~~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~-----~ 234 (350)
T 1sji_A 162 EEAAEHFQPYIKFFATFDKGVAKK--LSLKMNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRP-----E 234 (350)
T ss_dssp HHHHHHTTTTSEEEEECCHHHHHH--HTCCTTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCT-----T
T ss_pred HHHHHhhccCcEEEEECCHHHHHH--cCCCCCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcCh-----h
Confidence 999999999999999999989988 777789999999865555 88887 89999999999999999999999 6
Q ss_pred chhhhhcCCC-ceEE-EEEeCCCCCchHHHHHHHHHHHhhcC--ceeEEEEEcccchhhHH----hhcCCCCCCCceEEE
Q 010804 259 FVIKFFNSPN-AKAM-LFMNFSSEGTEPIQSKYREVAEQYKG--QGISFLLGDLEASQGAF----QYFGLQESQVPLIVI 330 (500)
Q Consensus 259 ~~~~~~~~~~-~~~~-l~~~~~~~~~~~~~~~l~~va~~~~~--~~~~f~~~d~~~~~~~~----~~~gi~~~~~P~i~i 330 (500)
++..++..+. ..++ +|...++.++.++.+.++++|+++++ + +.|+|+|+..++.++ +.+|++ .+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~-~~f~~id~~~~~~~~~~~~~~~gi~-~~~P~~~i 312 (350)
T 1sji_A 235 DMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPD-LSIVWIDPDDFPLLVAYWEKTFKID-LFKPQIGV 312 (350)
T ss_dssp THHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSS-CCEEEECGGGCHHHHHHHHHHCCSC-TTSCEEEE
T ss_pred hHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCc-eEEEEECchhhHHHHHHHHhhcCCC-ccCCcEEE
Confidence 8888888754 4433 44443343457899999999999986 6 999999999999888 789998 47899999
Q ss_pred EeCCC-Ccc---CC---CCCChhhHHHHHHHHhcCCCC
Q 010804 331 QTNDG-QKY---LK---PNLDADQIAPWVKEYKEGKVP 361 (500)
Q Consensus 331 ~~~~~-~~y---~~---~~~~~~~i~~fi~~~~~G~l~ 361 (500)
++..+ .+| ++ +.++.++|.+|++++++|++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 313 VNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp EESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC-
T ss_pred EecccccccccCCCcccccCCHHHHHHHHHHHhcCccC
Confidence 99854 345 33 489999999999999999873
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=4.3e-37 Score=328.89 Aligned_cols=412 Identities=15% Similarity=0.239 Sum_probs=343.6
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
+..+|.++|...+.+ .+++|.|+.+.|. | ...+.+.+++..+.+. .+.|+.+||...+. +|+++++.. |+++
T Consensus 337 v~~it~~~f~~~~~~-~~~lv~F~~~~~~-~-~~~~~~~~~A~~~~~~--~i~f~~~D~~~~~~--~~~~~~~~~-p~i~ 408 (780)
T 3apo_A 337 FELLSANQLEDRLAH-HRWLVFFHFGKNE-N-ANDPELKKLKTLLKNE--HIQVVRFDCSSAPG--ICSDLYVFQ-PSLA 408 (780)
T ss_dssp CCEECHHHHHHHHTT-SEEEEEEECC-------CCGGGGGHHHHHGGG--TEEEEEEEGGGCHH--HHHHTTCCS-CEEE
T ss_pred cccCCHHHHHHHhcc-CCeEEEEecCCcc-c-cchHHHHHHHHhhccC--ceeEEEEeCCCchh--hHhhccccC-Chhh
Confidence 345666666664433 5899999987653 2 3468889999988642 49999999998877 999999987 9999
Q ss_pred EEecCC-ceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCCc---hhHHHHHHHHHHhc
Q 010804 113 ILRNGG-KTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSG---EEFENYTALAEKLR 188 (500)
Q Consensus 113 ~~~~~~-~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~f~~~a~~~~ 188 (500)
+|+..+ +....|.|..+.+.|.+|+.....+.+.++ +.+.++++ .++.+++.|+.+++. ...+.+.++|+.++
T Consensus 409 l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l-~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~ 485 (780)
T 3apo_A 409 VFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTL-GPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLY 485 (780)
T ss_dssp EEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEEC-CTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred hccCCCcceeeecccHhhHHHHHHHhhhccCCCCEec-CHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhc
Confidence 999865 446789999999999999999999989988 56667766 667788888877664 56789999999999
Q ss_pred CCceEEEee---cccccCCCCCCCCC-CeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhh
Q 010804 189 SDYEFGHTQ---NAKLLPRGESSVTG-PVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFF 264 (500)
Q Consensus 189 ~~~~f~~~~---~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~ 264 (500)
+.+.|+.+. +..++.. +++.. |++++++. .....+.|..+.++|.+|+....-|.+..++. .++..+.
T Consensus 486 ~~v~~~~vd~~~~~~~~~~--~~v~~~Pt~~~~~~-g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~~-----~~f~~~v 557 (780)
T 3apo_A 486 GQLKVGTLDCTIHEGLCNM--YNIQAYPTTVVFNQ-SSIHEYEGHHSAEQILEFIEDLRNPSVVSLTP-----STFNELV 557 (780)
T ss_dssp TTCEEEEEETTTCHHHHHH--TTCCSSSEEEEEET-TEEEEECSCSCHHHHHHHHHHHHSCSEEECCH-----HHHHHHT
T ss_pred CCeEEEEEeCCCCHHHHHH--cCCCcCCeEEEEcC-CceeeecCcccHHHHHHHHHhhcccceeecCc-----ccHHHHh
Confidence 999999887 3456666 78877 99999965 33347889999999999999998899999998 6888876
Q ss_pred cC---CCceEEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCC---cc
Q 010804 265 NS---PNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQ---KY 338 (500)
Q Consensus 265 ~~---~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~---~y 338 (500)
.. +...++.|+.+.|..|+.....+.++|..++++ +.|+.+|+..+..+++.+|+. .+|+++++..++. .|
T Consensus 558 ~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~-v~~~~vd~~~~~~l~~~~~v~--~~Pti~~~~~~~~~~~~~ 634 (780)
T 3apo_A 558 KQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL-INVGSVDCGQYHSFCTQENVQ--RYPEIRFYPQKSSKAYQY 634 (780)
T ss_dssp TTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTTTHHHHHHTTCC--SSSEEEEECCCSSSCCSC
T ss_pred hccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC-eEEEEEECcchHHHHHHcCCC--CCCeEEEEcCCCcCccch
Confidence 55 455678888889999999999999999999998 999999999999999999999 7999999988652 34
Q ss_pred --CCC-CCChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHH
Q 010804 339 --LKP-NLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPIL 415 (500)
Q Consensus 339 --~~~-~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~ 415 (500)
|.| ..+.+.|.+|+.+... ..+..++.++|.+.+.+.+++++|+||++||++|+.+.|.|
T Consensus 635 ~~y~g~~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~ 697 (780)
T 3apo_A 635 HSYNGWNRDAYSLRSWGLGFLP-----------------QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEF 697 (780)
T ss_dssp EECCCSCCSHHHHHHHHHTTSC-----------------CCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH
T ss_pred hhcCCCCCCHHHHHHHHhhhcc-----------------cccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH
Confidence 678 8999999999998641 23778999999987778889999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecC----CCCHHHHHHHHHhhcCCC
Q 010804 416 DEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEG----DRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 416 ~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~~~~ 485 (500)
.+++..+++ ++.|+.+|++.++.+++++++.++|++++|+.|+.+.++.| ..+.++|.+||++++.+.
T Consensus 698 ~~la~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 698 ELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL 769 (780)
T ss_dssp HHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHTTC-
T ss_pred HHHHHHhcC--CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccccccCcccCCcCHHHHHHHHHHHHHHh
Confidence 999999876 69999999999998888899999999999977766556665 589999999999998653
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.97 E-value=1.6e-30 Score=238.43 Aligned_cols=226 Identities=41% Similarity=0.779 Sum_probs=192.2
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+.|..+++++|+.++.++++++|+||++||++|+.+.|.|.++++.+++.+.++.++.|||+.+.. +|++|+|.++
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~--l~~~~~v~~~ 90 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV--LASRFDVSGY 90 (241)
T ss_dssp EETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH--HHHHTTCCSS
T ss_pred cCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH--HHHhcCCCcC
Confidence 35679999999999999999999999999999999999999999999998777779999999999888 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhc
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLR 188 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~ 188 (500)
|++++|++| +.+ +|.|.++.+.+.+|+.+.+.+.....
T Consensus 91 Pt~~~~~~g-~~~-~~~g~~~~~~l~~~i~~~~~~~~~~~---------------------------------------- 128 (241)
T 3idv_A 91 PTIKILKKG-QAV-DYEGSRTQEEIVAKVREVSQPDWTPP---------------------------------------- 128 (241)
T ss_dssp SEEEEEETT-EEE-ECCSCSCHHHHHHHHHHHHSTTCCCC----------------------------------------
T ss_pred CEEEEEcCC-Ccc-cccCcccHHHHHHHHhhccCcccccc----------------------------------------
Confidence 999999976 443 79999999999999987664311000
Q ss_pred CCceEEEeecccccCCCCCCCCCCeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCC
Q 010804 189 SDYEFGHTQNAKLLPRGESSVTGPVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPN 268 (500)
Q Consensus 189 ~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 268 (500)
T Consensus 129 -------------------------------------------------------------------------------- 128 (241)
T 3idv_A 129 -------------------------------------------------------------------------------- 128 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCccCCCCCChhhH
Q 010804 269 AKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQKYLKPNLDADQI 348 (500)
Q Consensus 269 ~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~y~~~~~~~~~i 348 (500)
T Consensus 129 -------------------------------------------------------------------------------- 128 (241)
T 3idv_A 129 -------------------------------------------------------------------------------- 128 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCC-CCc
Q 010804 349 APWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DAD 427 (500)
Q Consensus 349 ~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~-~~~ 427 (500)
...+..++.++|++.+ ..++.++|+||++||++|+.+.|.|.+++..+.. ..+
T Consensus 129 -------------------------~~~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~ 182 (241)
T 3idv_A 129 -------------------------PEVTLVLTKENFDEVV-NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPP 182 (241)
T ss_dssp -------------------------CCSSEECCTTTHHHHH-HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSC
T ss_pred -------------------------cccceeccHHHHHHhh-ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCc
Confidence 0013345566666666 4567999999999999999999999999999854 246
Q ss_pred eEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 428 VVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 428 ~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+.|+.+|++.+..++++|++.++|++++|.+| +.+.|.|..+.++|.+||+++++..
T Consensus 183 v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 183 IPLAKVDATAETDLAKRFDVSGYPTLKIFRKG-RPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCCSSSEEEEEETT-EEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred EEEEEEECCCCHHHHHHcCCcccCEEEEEECC-eEEEecCCCCHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999754 5566999999999999999988754
No 10
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-29 Score=234.65 Aligned_cols=223 Identities=24% Similarity=0.403 Sum_probs=191.3
Q ss_pred cccccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcC
Q 010804 26 SAESKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYE 104 (500)
Q Consensus 26 ~~~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~ 104 (500)
..+..+.|.+|++++|+.++ +.+++++|+||++||++|+.+.|.|.++++.+.+. +.++.|||+.....++|++|+
T Consensus 12 ~~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~~~~l~~~~~ 88 (298)
T 3ed3_A 12 FYDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNKNKALCAKYD 88 (298)
T ss_dssp SCSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTTTHHHHHHTT
T ss_pred CCCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCccCHHHHHhCC
Confidence 35567789999999999999 56889999999999999999999999999999765 899999998655555999999
Q ss_pred cccccEEEEEecCC----------------ceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEE
Q 010804 105 IRGFPTIKILRNGG----------------KTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGV 168 (500)
Q Consensus 105 i~~~P~~~~~~~~~----------------~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~ 168 (500)
|.++|++++|++|+ .....|.|.++.+.|.+|+.+.+++.+..|++.++++++++.+....+++
T Consensus 89 I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~ 168 (298)
T 3ed3_A 89 VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVL 168 (298)
T ss_dssp CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEE
T ss_pred CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEE
Confidence 99999999999873 14679999999999999999999999999999999999999865555555
Q ss_pred ecCCCchhHHHHHHHHHHhcCCceEEEeecccccCCC---CCC-------------------CCCCeEEEeccCCCcc-c
Q 010804 169 FPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRG---ESS-------------------VTGPVVRLFKPFDELF-V 225 (500)
Q Consensus 169 ~~~~~~~~~~~f~~~a~~~~~~~~f~~~~~~~~~~~~---~~~-------------------~~~p~~~~~~~~~~~~-~ 225 (500)
| +.+......|.++|..+++.+.|+.+.+.+++... .++ .+.|++++|+..++.. .
T Consensus 169 f-s~~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~ 247 (298)
T 3ed3_A 169 F-SKQDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWE 247 (298)
T ss_dssp E-ESSSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEE
T ss_pred E-cCCCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEE
Confidence 5 45566789999999999999999999988777542 122 3469999999876666 7
Q ss_pred ccC-CCCHHHHHHHHH--HccCCcEEEeCC
Q 010804 226 DFK-DFKVDALEKFVE--ESSIPIVTVFNS 252 (500)
Q Consensus 226 ~~~-~~~~~~l~~~i~--~~~~p~~~~~~~ 252 (500)
|.| .++.++|.+||. .+..|.+..++.
T Consensus 248 y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~ 277 (298)
T 3ed3_A 248 YEGNSINKNDISKFLRDTFSITPNEGPFSR 277 (298)
T ss_dssp CCCSSCCHHHHHHHHHHHHTCCCSSSTTSH
T ss_pred eccccCCHHHHHHHHHhhcCCCCCcCCCch
Confidence 884 789999999999 888999999988
No 11
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.96 E-value=4.9e-29 Score=228.52 Aligned_cols=228 Identities=25% Similarity=0.416 Sum_probs=188.8
Q ss_pred hcCCCccccCChhhHhhhhcc-CCeEEEEEecCCCchhHHHHHHHHHHhcCCceEEEeecccccCCCCCCCCCCeEEEec
Q 010804 140 QSGPASAEIKSAEDASSFIGE-KKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFK 218 (500)
Q Consensus 140 ~~~~~~~~i~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 218 (500)
+.+|++.+|++.++++++++. +++++|+||.+.++..++.|.++|..+++++.|+.+.+++++++ ++++.|++++|+
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~--~~v~~p~ivlfk 80 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKF--LKVSLGKLVLMQ 80 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHH--HTCCSSEEEEEC
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHH--cCCCCCeEEEEe
Confidence 468999999999999999998 99999999999999999999999999999999999999999998 888889999999
Q ss_pred cC------CCcc-ccc--CCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCceEEEEEeCCC-----CCchH
Q 010804 219 PF------DELF-VDF--KDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSS-----EGTEP 284 (500)
Q Consensus 219 ~~------~~~~-~~~--~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~ 284 (500)
+. ++.. .|. |.++.++|.+||..+++|++.+++. .|...++ .+++++++|+..+. ...+.
T Consensus 81 ~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~-----~n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~ 154 (250)
T 3ec3_A 81 PEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKT-----SNDAKRY-SKRPLVVVYYSVDFSFDYRTATQF 154 (250)
T ss_dssp CGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECT-----TTHHHHS-CSSSEEEEEECCCCSTTTHHHHHH
T ss_pred cchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCc-----cchhhhh-ccCccEEEEEecccccccchhHHH
Confidence 62 3333 777 5789999999999999999999999 6888877 47888888886442 22367
Q ss_pred HHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCC-ceEEEEeCCCCcc-CC-CCCChhhHHHHHHHHhcCCCC
Q 010804 285 IQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQV-PLIVIQTNDGQKY-LK-PNLDADQIAPWVKEYKEGKVP 361 (500)
Q Consensus 285 ~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~-P~i~i~~~~~~~y-~~-~~~~~~~i~~fi~~~~~G~l~ 361 (500)
+.+.++++|++|+ + +.|+|+|+..++..++.||++..+. |.+++++.++.+| +. ++++.+.|.+|++++++|+++
T Consensus 155 ~~~~~~~vAk~~k-k-i~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~ 232 (250)
T 3ec3_A 155 WRNKVLEVAKDFP-E-YTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFKKGKLK 232 (250)
T ss_dssp HHHHHHHHHTTCT-T-SEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhhc-c-eeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHHCCCcc
Confidence 8999999999999 7 9999999999999999999986554 5888888666788 66 789999999999999999999
Q ss_pred CccccCCCCCCCCCCe
Q 010804 362 PFRKSEPIPEENNEPV 377 (500)
Q Consensus 362 ~~~~s~~~~~~~~~~~ 377 (500)
|++||+++|+.+.++|
T Consensus 233 p~~kSepiPe~~~~pV 248 (250)
T 3ec3_A 233 PVIKSQPVPKNNKGAA 248 (250)
T ss_dssp CCC-------------
T ss_pred ceeecCCCCCCCCCCC
Confidence 9999999998665554
No 12
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.96 E-value=2.1e-28 Score=224.90 Aligned_cols=231 Identities=22% Similarity=0.437 Sum_probs=187.5
Q ss_pred hhcCCCccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCCceEEEeecccccCCCCCCCCCCeEEEec
Q 010804 139 KQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFK 218 (500)
Q Consensus 139 ~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 218 (500)
++.+|++.+|++.++++++++.+.+.+|++|.+.++..++.|.++|..+++++.|+.+.+++++++ ++++.|++++|+
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~--~~~~~p~i~~fk 79 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNE--YDDNGEGIILFR 79 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHH--HCSSSEEEEEEC
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHH--hCCCCCcEEEEc
Confidence 457899999999999999999999999999999899999999999999999999999999999988 888889999999
Q ss_pred c------CCCcc-cc-cCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCceEEEEEeCCCCC----chHHH
Q 010804 219 P------FDELF-VD-FKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEG----TEPIQ 286 (500)
Q Consensus 219 ~------~~~~~-~~-~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~ 286 (500)
+ .++.. .| .|+++.++|.+||..+++|++.++|. .|...++. .+++++|+..+... .+.+.
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-----~n~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 152 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-----DNKDLIQG--KDLLIAYYDVDYEKNAKGSNYWR 152 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-----TTHHHHSS--SSEEEEEECCBTTTBHHHHHHHH
T ss_pred chhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccc-----ccHhhhcC--CCeEEEEeecchhhcchhHHHHH
Confidence 6 23444 78 89999999999999999999999999 68888754 45566666543332 24688
Q ss_pred HHHHHHHHhhcCc--eeEEEEEcccchhhHHhhcCC--CCCCCceEEEEeCCCCcc-CCCCCChhh--HHHHHHHHhcCC
Q 010804 287 SKYREVAEQYKGQ--GISFLLGDLEASQGAFQYFGL--QESQVPLIVIQTNDGQKY-LKPNLDADQ--IAPWVKEYKEGK 359 (500)
Q Consensus 287 ~~l~~va~~~~~~--~~~f~~~d~~~~~~~~~~~gi--~~~~~P~i~i~~~~~~~y-~~~~~~~~~--i~~fi~~~~~G~ 359 (500)
+.++++|++|+++ .+.|+|+|+..++..++.||+ +..+.|.++|++..+.+| +.++++.+. |.+|++++++|+
T Consensus 153 ~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 153 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHHCCC
Confidence 9999999999864 599999999999999999999 557899999998766788 878999999 999999999999
Q ss_pred CCCccccCCCCCCCCCCeE
Q 010804 360 VPPFRKSEPIPEENNEPVK 378 (500)
Q Consensus 360 l~~~~~s~~~~~~~~~~~~ 378 (500)
++|+++|+++|+.+.++|+
T Consensus 233 l~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 233 LKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp SCCCC--------------
T ss_pred ccccccCCCCCCCCCCCCC
Confidence 9999999999987655553
No 13
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.92 E-value=2.9e-24 Score=194.00 Aligned_cols=207 Identities=24% Similarity=0.399 Sum_probs=186.4
Q ss_pred CccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCCceEEEeecccccCCCCCCCCCCeEEEeccCCCc
Q 010804 144 ASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLFKPFDEL 223 (500)
Q Consensus 144 ~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 223 (500)
.+.+|++.++++++++.+++++|+||.+.++...+.|.++|..+ .++.|+.+.+++++++ ++++.|++++||..++.
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l-~~~~F~~t~~~~v~~~--~~v~~p~i~lfk~~~~~ 86 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGISTDSEVLTH--YNITGNTICLFRLVDNE 86 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTC-TTSEEEEECCHHHHHH--TTCCSSEEEEEETTTTE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhC-CCceEEEECCHHHHHH--cCCCCCeEEEEEecCcc
Confidence 46788899999999999999999999999999999999999999 5999999999999998 88888999999987655
Q ss_pred c-ccc----CCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCceEEE-EEeCCCCCchHHHHHHHHHHHhhc
Q 010804 224 F-VDF----KDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAML-FMNFSSEGTEPIQSKYREVAEQYK 297 (500)
Q Consensus 224 ~-~~~----~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~l~~va~~~~ 297 (500)
. .|. |.++.++|.+||+.++.|++.+++. .|+..++..+.+.+++ |.+.++.+++.+.+.++++|++|+
T Consensus 87 ~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~-----~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k 161 (227)
T 4f9z_D 87 QLNLEDEDIESIDATKLSRFIEINSLHMVTEYNP-----VTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQ 161 (227)
T ss_dssp EEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCH-----HHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTT
T ss_pred cccccccccCCCCHHHHHHHHHHhCCCceeecCc-----ccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhh
Confidence 5 666 4789999999999999999999999 7999999998888765 557677788999999999999999
Q ss_pred CceeEEEEEccc--chhhHHhhcCCCCCCCceEEEEeCCC-Ccc-CC-CCCChhhHHHHHHHHhcCC
Q 010804 298 GQGISFLLGDLE--ASQGAFQYFGLQESQVPLIVIQTNDG-QKY-LK-PNLDADQIAPWVKEYKEGK 359 (500)
Q Consensus 298 ~~~~~f~~~d~~--~~~~~~~~~gi~~~~~P~i~i~~~~~-~~y-~~-~~~~~~~i~~fi~~~~~G~ 359 (500)
++ +.|+|+|+. .++..++.||++..+.|++++++..+ .+| +. ++++.++|.+|++++++|+
T Consensus 162 ~~-i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 162 GK-ILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp TT-CEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred CC-EEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 99 999999995 58889999999977999999999877 567 54 7899999999999999996
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.87 E-value=1.8e-21 Score=176.09 Aligned_cols=195 Identities=13% Similarity=0.251 Sum_probs=160.2
Q ss_pred Cce-EEEEEeC-CCCCchHHHHHHHHHHHhhcCceeEEEEEcccc--hhhHHhhcCCCCCCCceEEEEeCCCC-cc-CCC
Q 010804 268 NAK-AMLFMNF-SSEGTEPIQSKYREVAEQYKGQGISFLLGDLEA--SQGAFQYFGLQESQVPLIVIQTNDGQ-KY-LKP 341 (500)
Q Consensus 268 ~~~-~~l~~~~-~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~--~~~~~~~~gi~~~~~P~i~i~~~~~~-~y-~~~ 341 (500)
.++ ++.|+.. .|..|+.....++++|.. .++ +.|+.+|+.. .+++++.||+. ..|+++++..+.. .. +.|
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~-v~~~~vd~~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~~~G 97 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDK-LSYEIVDFDTPEGKELAKRYRID--RAPATTITQDGKDFGVRYFG 97 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTT-EEEEEEETTSHHHHHHHHHTTCC--SSSEEEEEETTBCCSEEEES
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCc-eEEEEEeCCCcccHHHHHHcCCC--cCceEEEEcCCceeeEEEec
Confidence 344 4567777 799999999999999965 455 9999999998 99999999999 9999999976542 23 557
Q ss_pred CCChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeE-EEEEECCCChhHhhhhHHHHHHHH
Q 010804 342 NLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNV-LLEFYAPWCGHCKKLAPILDEVAV 420 (500)
Q Consensus 342 ~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~v~f~~~~c~~c~~~~~~~~~~~~ 420 (500)
..+.+.+..|+...+...- ....++.++++.+. +.++++ +|.||++||++|+.+.|.|.+++.
T Consensus 98 ~~~~~~l~~~l~~~l~~~~---------------~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~ 161 (226)
T 1a8l_A 98 LPAGHEFAAFLEDIVDVSR---------------EETNLMDETKQAIR-NIDQDVRILVFVTPTCPYCPLAVRMAHKFAI 161 (226)
T ss_dssp CCCTTHHHHHHHHHHHHHH---------------TCCCCCHHHHHHHT-TCCSCEEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhhcC---------------CCCCCCHHHHHHHH-hcCCCcEEEEEeCCCCCccHHHHHHHHHHHH
Confidence 7788899999998774321 12346777777765 445555 999999999999999999999999
Q ss_pred HcC--CCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 421 SYQ--NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 421 ~~~--~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
.+. +..++.++.+|++.+..++++|++.++|++++|+.|....++.|..+.++|.+||++++
T Consensus 162 ~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 162 ENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred hcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 886 11369999999999988888899999999999987666778999999999999998865
No 15
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.86 E-value=9.7e-21 Score=172.16 Aligned_cols=211 Identities=14% Similarity=0.168 Sum_probs=157.1
Q ss_pred CCceEEEEEeCC--CCCchHHHHHHHHHHHhh---cCce-eEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCccCC
Q 010804 267 PNAKAMLFMNFS--SEGTEPIQSKYREVAEQY---KGQG-ISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQKYLK 340 (500)
Q Consensus 267 ~~~~~~l~~~~~--~~~~~~~~~~l~~va~~~---~~~~-~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~y~~ 340 (500)
..|+.+.|+... +..++.....+.++|..+ +++. +.|+.+|....+++++.||++ ..|++++++. ..+| .
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~--~~Pt~~i~~g-~~~~-~ 100 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVE--RVPTVAFLGG-EVRW-T 100 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCC--SSSEEEETTT-TEEE-E
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCC--cCCEEEEECC-ceeE-c
Confidence 357766666556 788999999999999884 4443 999999999999999999999 8999999843 3333 3
Q ss_pred CCCChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHH
Q 010804 341 PNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAV 420 (500)
Q Consensus 341 ~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~ 420 (500)
|..+...+..|+..++++.-++. .++.+.++.+....++.+++.||++||++|+.+.|.|.+++.
T Consensus 101 G~~~~~~l~~fv~~~l~~~~~~~---------------~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~ 165 (243)
T 2hls_A 101 GIPAGEEIRALVEVIMRLSEDES---------------GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAY 165 (243)
T ss_dssp SCCCTTHHHHHHHHHHHHHTTCC---------------CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhccCCCC---------------CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHH
Confidence 45567889999988875322211 133344444332345677999999999999999999999998
Q ss_pred HcC--CCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCCCCCCccccCCC
Q 010804 421 SYQ--NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKD 498 (500)
Q Consensus 421 ~~~--~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 498 (500)
.+. +..++.++.+|++.++.++++|+++++|++++ +++. .+.|..+.++|.++|.+.++....+.+..+....+
T Consensus 166 ~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i---~G~~-~~~G~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~ 241 (243)
T 2hls_A 166 EAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI---NGYL-VFVGVPYEEDFLDYVKSAAEGRLTVKGPIRAGEAE 241 (243)
T ss_dssp HHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE---TTEE-EEESCCCHHHHHHHHHHHHTTCCCCCC--------
T ss_pred HcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE---CCEE-EEeCCCCHHHHHHHHHHHhhcccccCCCcCccccc
Confidence 883 22379999999999988888899999999988 4443 49999999999999999998887888887888877
Q ss_pred CC
Q 010804 499 EL 500 (500)
Q Consensus 499 e~ 500 (500)
||
T Consensus 242 ~~ 243 (243)
T 2hls_A 242 EL 243 (243)
T ss_dssp --
T ss_pred cC
Confidence 76
No 16
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.86 E-value=1.8e-20 Score=171.43 Aligned_cols=207 Identities=20% Similarity=0.330 Sum_probs=152.3
Q ss_pred ccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 29 SKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
..+.|..|++++|...+ +.+++++|+||++||++|+++.|.|+++++.+.+.+..+.|+.|||+.+...++|++|+|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 35678999999999987 55699999999999999999999999999999873345999999996655555999999999
Q ss_pred ccEEEEEecCCc----eeeecCCCCCHHHHHHHHHhhcCCCcc---------ccCChhhHhhhhccCC-eEEEEEecCCC
Q 010804 108 FPTIKILRNGGK----TIQEYKGPREADGIVEYLKKQSGPASA---------EIKSAEDASSFIGEKK-VVIIGVFPNFS 173 (500)
Q Consensus 108 ~P~~~~~~~~~~----~~~~~~g~~~~~~l~~~i~~~~~~~~~---------~i~~~~~~~~~~~~~~-~~~i~~~~~~~ 173 (500)
+|++++|++|++ ....+.| .+.+.|.+++.+.+..... ...+.+++..++..+. ..+.++|.+.+
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~ 168 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG 168 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC
Confidence 999999997532 1225666 7999999999887743321 2336788888876542 22333444443
Q ss_pred chhHHHHHHHHHHhc--CCceEEEeec--ccccCCCCCCCCC-CeEEEeccCCCcc-cccCCCCHHHHHHHHHH
Q 010804 174 GEEFENYTALAEKLR--SDYEFGHTQN--AKLLPRGESSVTG-PVVRLFKPFDELF-VDFKDFKVDALEKFVEE 241 (500)
Q Consensus 174 ~~~~~~f~~~a~~~~--~~~~f~~~~~--~~~~~~~~~~~~~-p~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~ 241 (500)
.. ...+++..+. ..+.+..+.+ .+++++ ++++. |+++++....... +..+.-+.+.+..+++.
T Consensus 169 ~~---~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~--f~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 169 SY---LAREVALDLSQHKGVAVRRVLNTEANVVRK--FGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQR 237 (244)
T ss_dssp CC---HHHHHHHHTTTCTTEEEEEEETTCHHHHHH--HTCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHT
T ss_pred cc---hHHHHHHHhccCCceEEEEEeCchHHHHHH--cCCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHh
Confidence 22 3444555555 4577777776 688888 88887 9999988766666 44444556777777754
No 17
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.84 E-value=9.4e-21 Score=171.69 Aligned_cols=195 Identities=14% Similarity=0.211 Sum_probs=157.6
Q ss_pred cCCCceEEEEEeCC-----CCCchHHHHHHHHHHHhh--cCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCc
Q 010804 265 NSPNAKAMLFMNFS-----SEGTEPIQSKYREVAEQY--KGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQK 337 (500)
Q Consensus 265 ~~~~~~~~l~~~~~-----~~~~~~~~~~l~~va~~~--~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~ 337 (500)
....++++.++..+ |..++.+...+.++|..+ .++ +.++.+|+...+++++.||+. .+|++++++.+...
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~--~~Ptl~~~~~~~~~ 94 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDK-IKLDIYSPFTHKEETEKYGVD--RVPTIVIEGDKDYG 94 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTT-EEEEEECTTTCHHHHHHTTCC--BSSEEEEESSSCCC
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCc-eEEEEecCcccHHHHHHcCCC--cCcEEEEECCCccc
Confidence 34566666555323 455588888888888888 566 999999999999999999999 89999999743334
Q ss_pred c-CCCCCChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeE-EEEEECCCChhHhhhhHHH
Q 010804 338 Y-LKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNV-LLEFYAPWCGHCKKLAPIL 415 (500)
Q Consensus 338 y-~~~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~v~f~~~~c~~c~~~~~~~ 415 (500)
. +.|..+.+.+..|+....... +.+..++.++|+.++ +.++++ +++||++||++|+.+.|.+
T Consensus 95 ~~~~G~~~~~~l~~~~~~~~~~~---------------~~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~~~~ 158 (229)
T 2ywm_A 95 IRYIGLPAGLEFTTLINGIFHVS---------------QRKPQLSEKTLELLQ-VVDIPIEIWVFVTTSCGYCPSAAVMA 158 (229)
T ss_dssp EEEESCCCTTHHHHHHHHHHHHH---------------TTCCSCCHHHHHHHT-TCCSCEEEEEEECTTCTTHHHHHHHH
T ss_pred ceecCCccHHHHHHHHHHHHhcc---------------CCccCCCHHHHHHHH-hcCCCeEEEEEECCCCcchHHHHHHH
Confidence 4 678889999999998876411 113457788888877 444454 8899999999999999999
Q ss_pred HHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 416 DEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 416 ~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
.+++..+. ++.++.+|++.+..++++|++.++|++++ . +++.++.|..+.++|.+||++.+++
T Consensus 159 ~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~-G~~~~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 159 WDFALAND---YITSKVIDASENQDLAEQFQVVGVPKIVI--N-KGVAEFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp HHHHHHCT---TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--G-GGTEEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCC---CeEEEEEECCCCHHHHHHcCCcccCEEEE--C-CEEEEeeCCCCHHHHHHHHHHHhhh
Confidence 99999873 69999999999998998999999999988 3 4467799999999999999988754
No 18
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.84 E-value=6.5e-19 Score=169.93 Aligned_cols=307 Identities=16% Similarity=0.156 Sum_probs=238.4
Q ss_pred ccccCChhhHhhhhccCCeEEEEEecCCCc--hhHHH-------HHHHHHHhcC-CceEEEee---cccccCCCCCCCCC
Q 010804 145 SAEIKSAEDASSFIGEKKVVIIGVFPNFSG--EEFEN-------YTALAEKLRS-DYEFGHTQ---NAKLLPRGESSVTG 211 (500)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~-------f~~~a~~~~~-~~~f~~~~---~~~~~~~~~~~~~~ 211 (500)
+..+ +.+++++.+.+++.+++.|+.++++ ...+. |.++|+.+.+ .+.|+.+. +.+++.+ +++..
T Consensus 13 v~~l-~~~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~--~~v~~ 89 (350)
T 1sji_A 13 VVSL-TEKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKK--LGFDE 89 (350)
T ss_dssp CEEE-CHHHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHH--HTCCS
T ss_pred cEEC-CHHHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHh--cCCCc
Confidence 5566 7788888998889999999988874 33344 8899999877 58888887 4567777 88887
Q ss_pred -CeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhc-CCCceEEEEEeCCCCCchHHHHHH
Q 010804 212 -PVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFN-SPNAKAMLFMNFSSEGTEPIQSKY 289 (500)
Q Consensus 212 -p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~l 289 (500)
|++++|+... ...|.|..+.+.|.+|+.....|.+..++.. .++..+.. .....++.|+... .......+
T Consensus 90 ~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~----~~~~~~~~~~~~~~vv~ff~~~---~~~~~~~~ 161 (350)
T 1sji_A 90 EGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSK----LEVQAFERIEDQIKLIGFFKSE---ESEYYKAF 161 (350)
T ss_dssp TTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSH----HHHHHHHHCCSSCEEEEECSCT---TSHHHHHH
T ss_pred cceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccch----HHHHHHhccCCCcEEEEEECCC---CcHHHHHH
Confidence 9999997754 4479999999999999999999999998642 46667665 5556666666532 34556899
Q ss_pred HHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCC-Ccc-CCCC-CChhhHHHHHHHHhcCCCCCcccc
Q 010804 290 REVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDG-QKY-LKPN-LDADQIAPWVKEYKEGKVPPFRKS 366 (500)
Q Consensus 290 ~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~-~~y-~~~~-~~~~~i~~fi~~~~~G~l~~~~~s 366 (500)
.++|..++++ +.|+.++. +++++.+|++ .|++++++..+ ... |.|. ++.+.|.+|+....
T Consensus 162 ~~~A~~~~~~-~~f~~~~~---~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~---------- 224 (350)
T 1sji_A 162 EEAAEHFQPY-IKFFATFD---KGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQ---------- 224 (350)
T ss_dssp HHHHHHTTTT-SEEEEECC---HHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHC----------
T ss_pred HHHHHhhccC-cEEEEECC---HHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcC----------
Confidence 9999999988 99998864 4688899997 79999999854 333 7776 89999999999843
Q ss_pred CCCCCCCCCCeEEEeccchhhhhhcCC-CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCC---
Q 010804 367 EPIPEENNEPVKVLVADSLQDMVFNSG-KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPG--- 442 (500)
Q Consensus 367 ~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--- 442 (500)
...+.+++.+++..+...+. +..++.|+.++|+.|..+.+.+.+++..+++..++.|+.+|++..+..+
T Consensus 225 -------~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~ 297 (350)
T 1sji_A 225 -------RPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYW 297 (350)
T ss_dssp -------CCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHH
T ss_pred -------ccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHH
Confidence 13488999999998774333 5556669999999999999999999999974336899999999876555
Q ss_pred -CCCCcC-cceEEEEEcCC-CceEE--ec---CCCCHHHHHHHHHhhcCCCC
Q 010804 443 -DTFEVQ-GYPTVFFRSAS-GKTVP--YE---GDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 443 -~~~~i~-~~P~~~~~~~~-~~~~~--~~---g~~~~~~l~~~i~~~~~~~~ 486 (500)
+.+++. ++|+++++... +.... +. +..+.++|.+|+++..+++.
T Consensus 298 ~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 298 EKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp HHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred HhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 457776 58999999652 22233 32 47899999999999887653
No 19
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.83 E-value=1.4e-18 Score=168.60 Aligned_cols=301 Identities=14% Similarity=0.236 Sum_probs=231.8
Q ss_pred cCceEEc-CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTL-DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l-~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
...+..+ +.+++++++..++.++|.|+...+..+ ...|.++|+.+ .. +.|+.++ +.. +|+++++..
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~---~~F~~t~---~~~--v~~~~~v~~- 82 (361)
T 3uem_A 16 SEFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DD---IPFGITS---NSD--VFSKYQLDK- 82 (361)
T ss_dssp CSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SS---SCEEEEC---CHH--HHHHTTCSS-
T ss_pred cccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CC---ceEEEEC---cHH--HHHHhCCCC-
Confidence 3445666 447899999999999999998765554 47899999987 32 7787554 344 999999988
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCC-eEEEEEecCCC---chhHHHHHHHH
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKK-VVIIGVFPNFS---GEEFENYTALA 184 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~-~~~i~~~~~~~---~~~~~~f~~~a 184 (500)
|++++|+.-......|.|..+.+.|.+||.....|.+.++ +.+.+..+..... ..+++|+...+ ....+.|.++|
T Consensus 83 ~~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~-~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A 161 (361)
T 3uem_A 83 DGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEF-TEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAA 161 (361)
T ss_dssp SEEEEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEEC-STTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceec-CcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHH
Confidence 9999998733345689999999999999999999999999 5666666666544 44454544333 45667999999
Q ss_pred HHhcCCceEEEeecc-----cccCCCCCCCC---CCeEEEeccCCCcccc---cCCCCHHHHHHHHHHccC---------
Q 010804 185 EKLRSDYEFGHTQNA-----KLLPRGESSVT---GPVVRLFKPFDELFVD---FKDFKVDALEKFVEESSI--------- 244 (500)
Q Consensus 185 ~~~~~~~~f~~~~~~-----~~~~~~~~~~~---~p~~~~~~~~~~~~~~---~~~~~~~~l~~~i~~~~~--------- 244 (500)
+.+++.+.|+.+... .++.. ++++ .|+++++........| .+..+.++|.+|++...-
T Consensus 162 ~~~~~~i~f~~vd~~~~~~~~~~~~--fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s 239 (361)
T 3uem_A 162 ESFKGKILFIFIDSDHTDNQRILEF--FGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMS 239 (361)
T ss_dssp GGGTTTCEEEEECTTSGGGHHHHHH--TTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBC
T ss_pred HHccCceEEEEecCChHHHHHHHHH--cCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccC
Confidence 999999999988733 34556 6665 4999999875443333 378999999999987421
Q ss_pred ---------CcEEEeCCCCCCccchhhhh-cCCCceEEEEEeCCCCCchHHHHHHHHHHHhhcCc-eeEEEEEcccchhh
Q 010804 245 ---------PIVTVFNSDANNHPFVIKFF-NSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQ-GISFLLGDLEASQG 313 (500)
Q Consensus 245 ---------p~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~-~~~f~~~d~~~~~~ 313 (500)
..+..++. .++.... ..++++++.|+...|..|......+.+++.+++++ .+.++.+|+....
T Consensus 240 ~~~p~~~~~~~v~~l~~-----~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~- 313 (361)
T 3uem_A 240 QELPEDWDKQPVKVLVG-----KNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE- 313 (361)
T ss_dssp CCCCTTTTTSSSEEECT-----TTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-
T ss_pred CCCCcccccCCcEEeec-----CchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-
Confidence 12555666 5666654 57888999999999999999999999999999875 5999999998766
Q ss_pred HHhhcCCCCCCCceEEEEeCC-C-Ccc-CCCCCChhhHHHHHHHH
Q 010804 314 AFQYFGLQESQVPLIVIQTND-G-QKY-LKPNLDADQIAPWVKEY 355 (500)
Q Consensus 314 ~~~~~gi~~~~~P~i~i~~~~-~-~~y-~~~~~~~~~i~~fi~~~ 355 (500)
+..+++. .+|+++++..+ + ... +.|..+.+.|.+||++-
T Consensus 314 -~~~~~v~--~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 314 -VEAVKVH--SFPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp -CSSCCCC--SSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred -hhhcCCc--ccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 6788888 89999999766 3 344 78999999999999764
No 20
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.83 E-value=5.2e-20 Score=150.17 Aligned_cols=111 Identities=21% Similarity=0.372 Sum_probs=97.9
Q ss_pred cccCceEEcCccChhhhhc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCC--CCCeEEEEEecChhhhHHHHHhcC
Q 010804 28 ESKEFVLTLDHSNFSDTVS-KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSH--DPPVVLAKVDANEEANKELASQYE 104 (500)
Q Consensus 28 ~~~~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~--~~~v~~~~vd~~~~~~~~~~~~~~ 104 (500)
...+.|..|++++|+..+. ++++++|+||++||++|+.+.|.|.++++.+... .+++.++.|||+.+.. +|++|+
T Consensus 12 ~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~--l~~~~~ 89 (127)
T 3h79_A 12 ERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD--VIERMR 89 (127)
T ss_dssp -CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH--HHHHTT
T ss_pred CCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh--HHHhcC
Confidence 3466789999999999984 6899999999999999999999999999987532 4569999999999888 999999
Q ss_pred cccccEEEEEecCCcee-eecCCCCCHHHHHHHHHhh
Q 010804 105 IRGFPTIKILRNGGKTI-QEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 105 i~~~P~~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~ 140 (500)
|.++|++++|++|++.. ..|.|.++.+.|.+||.+.
T Consensus 90 v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 99999999999875532 6899999999999999874
No 21
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.83 E-value=2.4e-18 Score=166.57 Aligned_cols=311 Identities=15% Similarity=0.168 Sum_probs=242.1
Q ss_pred CccccCChhhHhhhhccCCeEEEEEecCCCchh---H------HHHHHHHHHhcC-CceEEEee---cccccCCCCCCCC
Q 010804 144 ASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEE---F------ENYTALAEKLRS-DYEFGHTQ---NAKLLPRGESSVT 210 (500)
Q Consensus 144 ~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~------~~f~~~a~~~~~-~~~f~~~~---~~~~~~~~~~~~~ 210 (500)
.+..+ +.+.+++.++++..+++.|+..+++.. . ..+..+|..+.+ .+.|+.+. +++++.+ +++.
T Consensus 14 ~v~~l-t~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~--~~V~ 90 (367)
T 3us3_A 14 RVINV-NAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKK--LGLT 90 (367)
T ss_dssp CCEEC-CTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHH--HTCC
T ss_pred ccEEC-CHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHH--cCCC
Confidence 35566 777888888889999999999888652 2 267888888876 58898887 5677888 8888
Q ss_pred C-CeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhc-CCCceEEEEEeCCCCCchHHHHH
Q 010804 211 G-PVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFN-SPNAKAMLFMNFSSEGTEPIQSK 288 (500)
Q Consensus 211 ~-p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~ 288 (500)
. |++.+|+.. ....|.|..+.+.|.+|+.....|.+..++.. .++..+.. .....++.|+.. ........
T Consensus 91 ~~PTl~~f~~G-~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~----~~~~~~~~~~~~~~vv~ff~~---~~~~~~~~ 162 (367)
T 3us3_A 91 EEDSIYVFKED-EVIEYDGEFSADTLVEFLLDVLEDPVELIEGE----RELQAFENIEDEIKLIGYFKN---KDSEHYKA 162 (367)
T ss_dssp STTEEEEEETT-EEEECCSCCSHHHHHHHHHHHHSCSEEECCSH----HHHHHHHHCCSSCEEEEECSC---TTCHHHHH
T ss_pred cCceEEEEECC-cEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCH----HHHHHHhccCCCcEEEEEECC---CCchHHHH
Confidence 8 999999964 33489999999999999999999999999652 46777776 456666666653 23466788
Q ss_pred HHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCC-Ccc-CCC-CCChhhHHHHHHHHhcCCCCCccc
Q 010804 289 YREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDG-QKY-LKP-NLDADQIAPWVKEYKEGKVPPFRK 365 (500)
Q Consensus 289 l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~-~~y-~~~-~~~~~~i~~fi~~~~~G~l~~~~~ 365 (500)
+.++|..++++ +.|+.+... .+++.+|++ .|+++++.... ... |.| ..+.+.|.+||....
T Consensus 163 f~~~A~~~~~~-~~F~~~~~~---~~~~~~~v~---~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~--------- 226 (367)
T 3us3_A 163 FKEAAEEFHPY-IPFFATFDS---KVAKKLTLK---LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHR--------- 226 (367)
T ss_dssp HHHHHHHHTTT-SCEEEECCH---HHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTC---------
T ss_pred HHHHHHhhcCC-cEEEEECCH---HHHHHcCCC---CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcC---------
Confidence 99999999988 999988754 678889997 39999998854 333 676 599999999998832
Q ss_pred cCCCCCCCCCCeEEEeccchhhhhhcC-CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCC-
Q 010804 366 SEPIPEENNEPVKVLVADSLQDMVFNS-GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGD- 443 (500)
Q Consensus 366 s~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~- 443 (500)
...+.+++.+++.....+. .+..++.|+.++|..|.++.+.+.++|+.+++..++.|+.+|++..+...+
T Consensus 227 --------~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~ 298 (367)
T 3us3_A 227 --------RSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPY 298 (367)
T ss_dssp --------SCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHH
T ss_pred --------ccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHH
Confidence 2348899999998877443 457788899999999999999999999999864469999999998765532
Q ss_pred ---CCCcC-cceEEEEEcCCCc-eEE--ecC---CCCHHHHHHHHHhhcCCCCCCC
Q 010804 444 ---TFEVQ-GYPTVFFRSASGK-TVP--YEG---DRTKEDIVDFIENNRDKAAPKE 489 (500)
Q Consensus 444 ---~~~i~-~~P~~~~~~~~~~-~~~--~~g---~~~~~~l~~~i~~~~~~~~~~~ 489 (500)
.+++. .+|+++++..... ... +.+ .++.++|.+|+++.++++..++
T Consensus 299 ~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 299 WEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp HHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred HHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 25665 8999999975433 233 343 6899999999999987765544
No 22
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.82 E-value=6.9e-19 Score=159.04 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=157.8
Q ss_pred cChhhhh---ccCCeEEEEEECC-CChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh--hhhHHHHHhcCcccccEEE
Q 010804 39 SNFSDTV---SKHNFIVVEFYAP-WCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE--EANKELASQYEIRGFPTIK 112 (500)
Q Consensus 39 ~~~~~~~---~~~~~~lv~f~~~-~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~~~i~~~P~~~ 112 (500)
++++..+ .+++.++++||++ ||++|+.+.|.|+++++. . +++.++.|||+. ++. +|++|+|.++|+++
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~---~~v~~~~vd~~~~~~~~--~~~~~~v~~~Pt~~ 83 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T---DKLSYEIVDFDTPEGKE--LAKRYRIDRAPATT 83 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C---TTEEEEEEETTSHHHHH--HHHHTTCCSSSEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C---CceEEEEEeCCCcccHH--HHHHcCCCcCceEE
Confidence 3455555 3456788999999 999999999999998854 3 349999999998 655 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhhcCC--CccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCC
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQSGP--ASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSD 190 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~--~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~ 190 (500)
+|++|.....+|.|..+.+.+.+|+...+.. ....+
T Consensus 84 ~~~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l------------------------------------------ 121 (226)
T 1a8l_A 84 ITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL------------------------------------------ 121 (226)
T ss_dssp EEETTBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC------------------------------------------
T ss_pred EEcCCceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC------------------------------------------
Confidence 9987633347899998888898888765421 00000
Q ss_pred ceEEEeecccccCCCCCCCCCCeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCce
Q 010804 191 YEFGHTQNAKLLPRGESSVTGPVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAK 270 (500)
Q Consensus 191 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (500)
+. .++..+...+.++
T Consensus 122 ----------------------------------------~~-------------------------~~~~~~~~~~~~~ 136 (226)
T 1a8l_A 122 ----------------------------------------MD-------------------------ETKQAIRNIDQDV 136 (226)
T ss_dssp ----------------------------------------CH-------------------------HHHHHHTTCCSCE
T ss_pred ----------------------------------------CH-------------------------HHHHHHHhcCCCc
Confidence 00 1223333344566
Q ss_pred -EEEEEeCCCCCchHHHHHHHHHHHhhc----CceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCcc-CCCCCC
Q 010804 271 -AMLFMNFSSEGTEPIQSKYREVAEQYK----GQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQKY-LKPNLD 344 (500)
Q Consensus 271 -~~l~~~~~~~~~~~~~~~l~~va~~~~----~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~y-~~~~~~ 344 (500)
++.|....|..|......+.+++.++. ++ +.++.+|+...+++++.+|+. .+|+++++..+.... +.|..+
T Consensus 137 ~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~~G~~~ 213 (226)
T 1a8l_A 137 RILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGK-ILGDMVEAIEYPEWADQYNVM--AVPKIVIQVNGEDRVEFEGAYP 213 (226)
T ss_dssp EEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCC-EEEEEEEGGGCHHHHHHTTCC--SSCEEEEEETTEEEEEEESCCC
T ss_pred EEEEEeCCCCCccHHHHHHHHHHHHhcccccCCc-EEEEEEEcccCHHHHHhCCCc--ccCeEEEEeCCceeEEEcCCCC
Confidence 777888899999999999999999998 45 999999999999999999998 899999987443334 678899
Q ss_pred hhhHHHHHHHHh
Q 010804 345 ADQIAPWVKEYK 356 (500)
Q Consensus 345 ~~~i~~fi~~~~ 356 (500)
.+.+.+|++..+
T Consensus 214 ~~~l~~~l~~~l 225 (226)
T 1a8l_A 214 EKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998865
No 23
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.81 E-value=1.3e-18 Score=174.35 Aligned_cols=207 Identities=21% Similarity=0.293 Sum_probs=154.3
Q ss_pred ccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 29 SKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
..+.|..+++++|+..+ +.+++++|+||++||++|+++.|.|+++++++.+.+..+.|+.|||+.+...++|++|+|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 35678999999999977 66789999999999999999999999999999874445999999997655556999999999
Q ss_pred ccEEEEEecC---CceeeecCCCCCHHHHHHHHHhhcCCC----------ccccCChhhHhhhhccCC-eEEEEEecCCC
Q 010804 108 FPTIKILRNG---GKTIQEYKGPREADGIVEYLKKQSGPA----------SAEIKSAEDASSFIGEKK-VVIIGVFPNFS 173 (500)
Q Consensus 108 ~P~~~~~~~~---~~~~~~~~g~~~~~~l~~~i~~~~~~~----------~~~i~~~~~~~~~~~~~~-~~~i~~~~~~~ 173 (500)
+|++++|++| |+....+.|..+.+.|.++|.+.+... +..+ +.+++++++..+. ..++++|.+.+
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~~vallF~~~~ 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKADYLALVFERED 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCSEEEEEEECTT
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCCeEEEEecCCc
Confidence 9999999963 345567888899999999999877532 2344 6688888887643 23334444444
Q ss_pred chhHHHHHHHHHHhcC--CceEEEeec--ccccCCCCCCCCC-CeEEEeccCCCcc-cccCCCCHHHHHHHHHH
Q 010804 174 GEEFENYTALAEKLRS--DYEFGHTQN--AKLLPRGESSVTG-PVVRLFKPFDELF-VDFKDFKVDALEKFVEE 241 (500)
Q Consensus 174 ~~~~~~f~~~a~~~~~--~~~f~~~~~--~~~~~~~~~~~~~-p~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~ 241 (500)
+. ...+++..+.. .+.+..+.+ .+++++ ++++. |+++++...+... +....-....+..+++.
T Consensus 169 s~---~~~~~~ldl~~~~~v~v~~v~~~~~~l~~k--fgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 SY---LGREVTLDLSQYHAVAVRRVLNTESDLVNK--FGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CC---HHHHHHHHTTTCTTEEEEEEETTCHHHHHH--HTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHHHTT
T ss_pred hH---HHHHHHHHhhccCCeeEEEecCchHHHHHH--cCCCCCCeEEEEeCCCceeecccccccHHHHHHHHHH
Confidence 32 44455556653 466776665 478888 88887 9999998866544 33233344566777664
No 24
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.81 E-value=1.2e-18 Score=157.79 Aligned_cols=200 Identities=13% Similarity=0.094 Sum_probs=156.0
Q ss_pred Chhhhh--ccCCeEEEEEE-----CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 40 NFSDTV--SKHNFIVVEFY-----APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 40 ~~~~~~--~~~~~~lv~f~-----~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
+++.++ ...++++|.|| ++||+||+.+.|.|.++++.+.+ .+++.++.|||+.++. +|++|+|+++||++
T Consensus 10 ~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-~~~v~~~~vd~~~~~~--l~~~~~v~~~Ptl~ 86 (229)
T 2ywm_A 10 QLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-QDKIKLDIYSPFTHKE--ETEKYGVDRVPTIV 86 (229)
T ss_dssp HHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-TTTEEEEEECTTTCHH--HHHHTTCCBSSEEE
T ss_pred HHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-CCceEEEEecCcccHH--HHHHcCCCcCcEEE
Confidence 455555 33445555555 89999999999999999988843 2349999999999888 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhhcC--CCccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCC
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQSG--PASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSD 190 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~ 190 (500)
+|++ |....+|.|.++.+.+.+|+...+. ..+..+ +
T Consensus 87 ~~~~-~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~---------------------------------------- 124 (229)
T 2ywm_A 87 IEGD-KDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-S---------------------------------------- 124 (229)
T ss_dssp EESS-SCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-C----------------------------------------
T ss_pred EECC-CcccceecCCccHHHHHHHHHHHHhccCCccCC-C----------------------------------------
Confidence 9985 4677899999999999999887542 111111 0
Q ss_pred ceEEEeecccccCCCCCCCCCCeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCce
Q 010804 191 YEFGHTQNAKLLPRGESSVTGPVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAK 270 (500)
Q Consensus 191 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (500)
. .++..+...+.++
T Consensus 125 -----------------------------------------~-------------------------~~~~~~~~~~~~~ 138 (229)
T 2ywm_A 125 -----------------------------------------E-------------------------KTLELLQVVDIPI 138 (229)
T ss_dssp -----------------------------------------H-------------------------HHHHHHTTCCSCE
T ss_pred -----------------------------------------H-------------------------HHHHHHHhcCCCe
Confidence 0 1223333344455
Q ss_pred -EEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCcc-CCCCCChhhH
Q 010804 271 -AMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQKY-LKPNLDADQI 348 (500)
Q Consensus 271 -~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~y-~~~~~~~~~i 348 (500)
++.|....|..|......+.+++.++ ++ +.++.+|+...+++++.+|+. .+|++++ +++.. +.|..+.+.+
T Consensus 139 ~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~-v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~---~G~~~~~~G~~~~~~l 211 (229)
T 2ywm_A 139 EIWVFVTTSCGYCPSAAVMAWDFALAN-DY-ITSKVIDASENQDLAEQFQVV--GVPKIVI---NKGVAEFVGAQPENAF 211 (229)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHC-TT-EEEEEEEGGGCHHHHHHTTCC--SSSEEEE---GGGTEEEESCCCHHHH
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHC-CC-eEEEEEECCCCHHHHHHcCCc--ccCEEEE---CCEEEEeeCCCCHHHH
Confidence 55688889999999999999999999 44 999999999999999999998 8999998 34344 6788999999
Q ss_pred HHHHHHHhc
Q 010804 349 APWVKEYKE 357 (500)
Q Consensus 349 ~~fi~~~~~ 357 (500)
.+|++..++
T Consensus 212 ~~~l~~~~~ 220 (229)
T 2ywm_A 212 LGYIMAVYE 220 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998764
No 25
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.80 E-value=2.9e-19 Score=139.47 Aligned_cols=100 Identities=31% Similarity=0.704 Sum_probs=87.2
Q ss_pred eEEcC-ccChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 33 VLTLD-HSNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 33 v~~l~-~~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
|.+++ .++|++.+. ++++++|+||++||++|+.+.|.|+++++.+.+ +.|+.||++..++ ++++|+|+++|
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~vd~d~~~~--l~~~~~V~~~P 75 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD----VVFLKVDVDECED--IAQDNQIACMP 75 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEETTTCHH--HHHHTTCCBSS
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC----eEEEEEecccCHH--HHHHcCCCeec
Confidence 34454 468999884 478999999999999999999999999988743 8999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
|+++|++| +.+.++.| .+.+.|.++|+++
T Consensus 76 T~~~~~~G-~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 76 TFLFMKNG-QKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEEETT-EEEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEEeC-cCHHHHHHHHHhc
Confidence 99999865 88889999 5899999999864
No 26
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=6.5e-19 Score=146.38 Aligned_cols=115 Identities=43% Similarity=0.868 Sum_probs=104.5
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+.+..+++++|+..+.++++++|+||++||++|+.+.|.|.++++.+.+.+.++.++.|||+.+.. ++++|+|.++
T Consensus 15 ~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~v~~~ 92 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASM--LASKFDVSGY 92 (140)
T ss_dssp EETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHH--HHHHTTCCSS
T ss_pred CCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHH--HHHHCCCCcc
Confidence 44678999999999999999999999999999999999999999999998766679999999999887 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccc
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAE 147 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 147 (500)
|++++|++| + ..+|.|..+.+.|.+|+.+.+.+....
T Consensus 93 Pt~~~~~~G-~-~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 93 PTIKILKKG-Q-AVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp SEEEEEETT-E-EEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred CeEEEEECC-c-EEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 999999765 6 788999999999999999998776543
No 27
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.79 E-value=3.7e-19 Score=143.56 Aligned_cols=113 Identities=57% Similarity=1.039 Sum_probs=103.0
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+.+..+++++|+.++.++++++|+||++||++|+.+.|.+.++++.+.+.+.++.++.+||+.+.. ++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~v~~~ 82 (120)
T 1mek_A 5 EEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD--LAQQYGVRGY 82 (120)
T ss_dssp EETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS--SHHHHTCCSS
T ss_pred CCCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH--HHHHCCCCcc
Confidence 35668999999999999999999999999999999999999999999998655679999999999888 9999999999
Q ss_pred cEEEEEecCCcee--eecCCCCCHHHHHHHHHhhcCCC
Q 010804 109 PTIKILRNGGKTI--QEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 109 P~~~~~~~~~~~~--~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
|++++|++| +.. ..|.|..+.+.|.+|+.+.++++
T Consensus 83 Pt~~~~~~g-~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 83 PTIKFFRNG-DTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp SEEEEEESS-CSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred cEEEEEeCC-CcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999999765 555 78999999999999999988765
No 28
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.78 E-value=2e-18 Score=137.34 Aligned_cols=105 Identities=24% Similarity=0.563 Sum_probs=97.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
+..+++++|++.+ ++++++|+||++||++|+.+.|.+.++++.+.+. +.++.||++.+.. ++++|+|.++|+++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK---LKIVKIDVDENQE--TAGKYGVMSIPTLL 76 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT---CEEEEEETTTCCS--HHHHTTCCSBSEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---cEEEEEECCCCHH--HHHHcCCCcccEEE
Confidence 5689999999999 8999999999999999999999999999999754 9999999999988 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
+|++ |+.+.++.|..+.+.|.+|+.+.+++.
T Consensus 77 ~~~~-G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 77 VLKD-GEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEET-TEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEeC-CEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9964 588889999999999999999988764
No 29
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.77 E-value=9.3e-19 Score=142.71 Aligned_cols=109 Identities=23% Similarity=0.430 Sum_probs=97.8
Q ss_pred CCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcC---CCCceEEEEEeCCCCCCCCCCCCcCc
Q 010804 373 NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQ---NDADVVIAKFDATANDIPGDTFEVQG 449 (500)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~---~~~~~~~~~id~~~~~~~~~~~~i~~ 449 (500)
..+.+..|++++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+. ...++.|+++|++.+..++++|++.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 345689999999999997779999999999999999999999999998763 23479999999999999999999999
Q ss_pred ceEEEEEcCCCce--EEecCCCCHHHHHHHHHhh
Q 010804 450 YPTVFFRSASGKT--VPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 450 ~P~~~~~~~~~~~--~~~~g~~~~~~l~~~i~~~ 481 (500)
+|++++|.+|++. .+|.|..+.++|.+||+++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999888763 6899999999999999876
No 30
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.77 E-value=1.6e-18 Score=137.77 Aligned_cols=106 Identities=21% Similarity=0.356 Sum_probs=97.2
Q ss_pred CceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
..+..+++++|...+ .++++++|+||++||++|+.+.|.+.++++.+.+. +.|+.+|++..+. ++++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~P 78 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES---FGFYYVDVEEEKT--LFQRFSLKGVP 78 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCHH--HHHHTTCCSSC
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc---eEEEEEECCcChh--HHHhcCCCcCC
Confidence 457889999999999 88899999999999999999999999999998754 9999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
++++|++| +.+.++.|..+.+.+.+|+.+.++
T Consensus 79 t~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 79 QILYFKDG-EYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEEEETT-EEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEEeccCCHHHHHHHHHHHhc
Confidence 99999765 788899999999999999998753
No 31
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.77 E-value=2.8e-18 Score=136.29 Aligned_cols=107 Identities=38% Similarity=0.771 Sum_probs=96.1
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
.+.+..+++++|++.+. +++++|+||++||++|+.+.|.+.++++.+......+.++.+|++.++. ++++|+|.++|
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~--l~~~~~v~~~P 80 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN--ICSKYSVRGYP 80 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH--HHHHTTCCSSS
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh--HHHhcCCCccc
Confidence 45688999999999998 7899999999999999999999999999876544569999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
++++|++| +.+.++.|..+.+.|.+|+.+.
T Consensus 81 t~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 81 TLLLFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 99999765 7788999999999999999874
No 32
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.77 E-value=4.1e-18 Score=134.09 Aligned_cols=104 Identities=25% Similarity=0.552 Sum_probs=95.6
Q ss_pred CceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccE
Q 010804 31 EFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPT 110 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~ 110 (500)
..+..+++++|+..+ ++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|+
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~Pt 76 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDENPS--TAAKYEVMSIPT 76 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--HHHHTTCCSBSE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcCHH--HHHhCCCcccCE
Confidence 357889999999999 8999999999999999999999999999999764 9999999999888 999999999999
Q ss_pred EEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 111 IKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+++|++ |+...++.|..+.+.+.+++.+.+
T Consensus 77 ~~~~~~-G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 77 LIVFKD-GQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEEEET-TEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEEEeC-CeEEEEEeCCCCHHHHHHHHHHhC
Confidence 999985 488889999999999999998753
No 33
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.77 E-value=3.2e-18 Score=135.48 Aligned_cols=106 Identities=24% Similarity=0.574 Sum_probs=97.7
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
.+.+..+++++|+.++.++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++..+. ++++|+|.++|
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~i~~~P 77 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK---AVFGRLNVDENQK--IADKYSVLNIP 77 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCHH--HHHHTTCCSSS
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC---ceEEEEccccCHH--HHHhcCcccCC
Confidence 356788999999999999999999999999999999999999999998764 9999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++++|++ |+...++.|..+.+.|.+++.+.+
T Consensus 78 t~~~~~~-g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 78 TTLIFVN-GQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEEEET-TEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEEcC-CcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999965 588889999999999999998865
No 34
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.77 E-value=1.7e-16 Score=160.19 Aligned_cols=306 Identities=16% Similarity=0.210 Sum_probs=230.8
Q ss_pred ceEEc-CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccE
Q 010804 32 FVLTL-DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPT 110 (500)
Q Consensus 32 ~v~~l-~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~ 110 (500)
.+..+ +.++++.++..++.++|.|+.++|.. ..+.|.+++..+.+. +.|+.++ +.. +++++++...|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~---~~~~f~~~a~~~~~~---~~F~~~~---~~~--~~~~~~v~~~~- 178 (481)
T 3f8u_A 111 ASVPLRTEEEFKKFISDKDASIVGFFDDSFSE---AHSEFLKAASNLRDN---YRFAHTN---VES--LVNEYDDNGEG- 178 (481)
T ss_dssp SEEEECSHHHHHHHTTSSSCEEEEEESCTTCH---HHHHHHHHHHHHTTT---SCEEEEC---CHH--HHHHHCSSSEE-
T ss_pred CceecCCHHHHHHHHhcCCcEEEEEECCCccc---hHHHHHHHHHHhccC---ceEEEEC---CHH--HHHHhCCCCCc-
Confidence 35555 56789999989999999999887665 468899999999765 8888764 233 99999999866
Q ss_pred EEEEe------cCCceeeecC-CCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCCc--h----hH
Q 010804 111 IKILR------NGGKTIQEYK-GPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSG--E----EF 177 (500)
Q Consensus 111 ~~~~~------~~~~~~~~~~-g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~--~----~~ 177 (500)
+++|+ ........|. |..+.+.|.+||....-|.+.++ +.+.+..+.+ .+..++++..+... . ..
T Consensus 179 i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~-t~~n~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~ 256 (481)
T 3f8u_A 179 IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHM-TEDNKDLIQG-KDLLIAYYDVDYEKNAKGSNYWR 256 (481)
T ss_dssp EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEE-CTTTHHHHTT-SSEEEEEECCCTTTCHHHHHHHH
T ss_pred EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCcccc-ChhHHHHhcC-CCceEEEEecccccchhhHHHHH
Confidence 78888 2223456888 78999999999999999999999 5555666653 34444433332221 1 24
Q ss_pred HHHHHHHHHhcCC---ceEEEeeccccc---CCCCCCCC-----CCeEEEeccCCCcccccCCCCHH--HHHHHHHHccC
Q 010804 178 ENYTALAEKLRSD---YEFGHTQNAKLL---PRGESSVT-----GPVVRLFKPFDELFVDFKDFKVD--ALEKFVEESSI 244 (500)
Q Consensus 178 ~~f~~~a~~~~~~---~~f~~~~~~~~~---~~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~--~l~~~i~~~~~ 244 (500)
..+.++|+.+++. +.|+.+...... .. ++++ .|.++++.....+..+.++++.+ .|..|+....-
T Consensus 257 ~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~--~gl~~~~~~~P~~~i~~~~~~ky~~~~~~t~e~~~l~~f~~~~~~ 334 (481)
T 3f8u_A 257 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSD--FGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFD 334 (481)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGG--GTCCCCTTCSCEEEEECSSSCEEECCSCCCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHH--cCCCcccCCCcEEEEEcCCCcccCCCcccCccHHHHHHHHHHHhc
Confidence 5688999999887 999998855433 34 4553 49999987444444666888888 99999975321
Q ss_pred -----------------CcEEEeCCCCCCccchhhhhc-CCCceEEEEEeCCCCCchHHHHHHHHHHHhhcCc-eeEEEE
Q 010804 245 -----------------PIVTVFNSDANNHPFVIKFFN-SPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQ-GISFLL 305 (500)
Q Consensus 245 -----------------p~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~-~~~f~~ 305 (500)
..+..++. .++..... .++++++.|....|..|......+.+++.++.+. .+.++.
T Consensus 335 g~~~~~~~s~~~p~~~~~~v~~~~~-----~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~ 409 (481)
T 3f8u_A 335 GNLKRYLKSEPIPESNDGPVKVVVA-----ENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAK 409 (481)
T ss_dssp TCCCCCCCCCCCCSCCCSSSEEECT-----TTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEE
T ss_pred CCcccccccCCCCCCCCCCeEEecc-----cCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEE
Confidence 12334444 46666554 4788999999999999999999999999999874 599999
Q ss_pred EcccchhhHHhhcCCCCCCCceEEEEeCCCC--cc-CCCCCChhhHHHHHHHHhcCCCC
Q 010804 306 GDLEASQGAFQYFGLQESQVPLIVIQTNDGQ--KY-LKPNLDADQIAPWVKEYKEGKVP 361 (500)
Q Consensus 306 ~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~--~y-~~~~~~~~~i~~fi~~~~~G~l~ 361 (500)
+|+... ++...+++. .+|++++++.++. .. +.|..+.+.+.+|+.+.....+.
T Consensus 410 id~~~~-~~~~~~~v~--~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 410 MDATAN-DVPSPYEVR--GFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp EETTSS-CCCTTCCCC--SSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCC
T ss_pred EECCch-hhHhhCCCc--ccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCccc
Confidence 999876 777889998 9999999998874 45 78999999999999998765544
No 35
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=2.5e-18 Score=140.82 Aligned_cols=108 Identities=40% Similarity=0.760 Sum_probs=98.0
Q ss_pred ccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 29 SKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
..+.+..+++++|...+ .++++++|+||++||++|+.+.|.+.++++.+.+. +.|+.||++.+.. ++++|+|.+
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~--l~~~~~v~~ 89 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADKHQS--LGGQYGVQG 89 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTTCHH--HHHHHTCCS
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCCCHH--HHHHcCCCc
Confidence 45668899999999954 77889999999999999999999999999998764 9999999999888 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+|++++|++|+....+|.|..+.+.+.+|+.+.+
T Consensus 90 ~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 90 FPTIKIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp SSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 9999999988765789999999999999999876
No 36
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.76 E-value=7e-18 Score=133.27 Aligned_cols=105 Identities=29% Similarity=0.621 Sum_probs=94.9
Q ss_pred CceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
+.|..+++++|...+ +++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNPG--TAPKYGIRGIP 76 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCTT--HHHHTTCCSSS
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC---cEEEEEECCCCHH--HHHHcCCcccC
Confidence 457889999999654 78899999999999999999999999999998654 9999999999988 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++++|++ |+...++.|..+.+.+.+|+.+.+
T Consensus 77 t~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 77 TLLLFKN-GEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEEEET-TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeC-CEEEEEEecCCCHHHHHHHHHHhh
Confidence 9999965 588889999999999999998764
No 37
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.76 E-value=5.2e-18 Score=133.25 Aligned_cols=103 Identities=26% Similarity=0.584 Sum_probs=94.0
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
+..+++++|+.+++++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|+++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~~~--~~~~~~v~~~Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK---VTVAKLNVDENPE--TTSQFGIMSIPTLI 76 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT---CEEEEEETTTCHH--HHHHTTCCSSSEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---cEEEEEECcCCHH--HHHHcCCccccEEE
Confidence 568999999998999999999999999999999999999999998654 9999999998887 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+|++ |+...++.|..+.+.+.+++.+.+
T Consensus 77 ~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKG-GRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEET-TEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeC-CeEEEEEecCCCHHHHHHHHHHHh
Confidence 9965 588889999999999999998764
No 38
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.76 E-value=7.7e-18 Score=139.56 Aligned_cols=129 Identities=26% Similarity=0.473 Sum_probs=107.6
Q ss_pred HHHHccCCcEEEeCCCCCCccchhhhhcCCCceEEEEEe-CCCCCchHHHHHHHHHHHhhcCceeEEEEEcc--cchhhH
Q 010804 238 FVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMN-FSSEGTEPIQSKYREVAEQYKGQGISFLLGDL--EASQGA 314 (500)
Q Consensus 238 ~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~--~~~~~~ 314 (500)
-++.+++|++.++|. .|...++.++.+.+++++. .+..+.+.+...++++|++|+++ +.|+++|. ..++..
T Consensus 7 ~~~~~~~PLV~e~t~-----en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~~~~~~~~ 80 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTE-----QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFAFIDSDHTDNQRI 80 (147)
T ss_dssp --------CEEECCT-----TTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-CEEEEECTTCGGGHHH
T ss_pred chhhccCCeeEEecc-----ccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-eEEEEEecchHhHHHH
Confidence 467889999999999 6899999999999876444 34555788999999999999999 99999999 788889
Q ss_pred HhhcCCCCCCCceEEEEeC-C-CCcc-CC-CCCChhhHHHHHHHHhcCCCCCccccCCCCCC
Q 010804 315 FQYFGLQESQVPLIVIQTN-D-GQKY-LK-PNLDADQIAPWVKEYKEGKVPPFRKSEPIPEE 372 (500)
Q Consensus 315 ~~~~gi~~~~~P~i~i~~~-~-~~~y-~~-~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~ 372 (500)
++.||++..+.|.++|.+. . +++| +. ++++.+.|.+|++++++|+++|++|||++|+.
T Consensus 81 l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~ 142 (147)
T 3bj5_A 81 LEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 142 (147)
T ss_dssp HHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGG
T ss_pred HHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCC
Confidence 9999999878999999986 3 3678 55 89999999999999999999999999999974
No 39
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=6.3e-18 Score=139.05 Aligned_cols=111 Identities=44% Similarity=0.733 Sum_probs=98.4
Q ss_pred ccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-CCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 29 SKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSS-HDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~-~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
..+.+..+++++|...+ +++++++|+||++||++|+.+.|.|.++++.+.. ..+++.|+.|||+.+.. ++++|+|.
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~--l~~~~~v~ 82 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV--LASRYGIR 82 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH--HHHHHTCC
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH--HHHhCCCC
Confidence 35668899999999876 6788999999999999999999999999999872 01239999999999888 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
++|++++|++| +...+|.|..+.+.|.+|+.+.+.
T Consensus 83 ~~Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 83 GFPTIKIFQKG-ESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp SSSEEEEEETT-EEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eeCeEEEEeCC-CceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999985 778899999999999999998763
No 40
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.76 E-value=8.1e-18 Score=133.07 Aligned_cols=106 Identities=25% Similarity=0.588 Sum_probs=96.1
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEE
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTI 111 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~ 111 (500)
.+..+++++|+.+++++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~Pt~ 76 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK---LLVAKLDVDENPK--TAMRYRVMSIPTV 76 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTCHH--HHHHTTCCSSSEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc---eEEEEEECCCCHh--HHHhCCCCcCCEE
Confidence 4678999999999999999999999999999999999999999998754 9999999999888 9999999999999
Q ss_pred EEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 112 KILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
++|++ |+...++.|..+.+.+.+|+.+.++.
T Consensus 77 ~~~~~-g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 77 ILFKD-GQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEEET-TEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEEeC-CcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 99965 47788899999999999999987753
No 41
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.75 E-value=6.7e-18 Score=137.26 Aligned_cols=105 Identities=19% Similarity=0.192 Sum_probs=92.2
Q ss_pred eEEE-eccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 377 VKVL-VADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 377 ~~~l-~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+..| +.++|++.+++ .+++|+|.|||+||++|+.+.|.|++++.++.+ .+.|+++|+++++++..+|+|.++||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 4555 45889988864 788999999999999999999999999999976 5999999999999999999999999999
Q ss_pred EEcCCCce--E-------EecCCCC-HHHHHHHHHhhcC
Q 010804 455 FRSASGKT--V-------PYEGDRT-KEDIVDFIENNRD 483 (500)
Q Consensus 455 ~~~~~~~~--~-------~~~g~~~-~~~l~~~i~~~~~ 483 (500)
+|.+|+.+ . +..|..+ .++|.++|+.++.
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 99776665 3 6889876 9999999998764
No 42
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.75 E-value=6.1e-18 Score=135.61 Aligned_cols=103 Identities=14% Similarity=0.214 Sum_probs=95.1
Q ss_pred eEEcCccChhhhhccCC-eEEEEEECCCC--hhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 33 VLTLDHSNFSDTVSKHN-FIVVEFYAPWC--GHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~-~~lv~f~~~~c--~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
...+++++|+..+.+++ +++|+||++|| ++|+.+.|.++++++++.++ +.|+.||.+.++. ++.+|+|+++|
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe~~~--la~~ygV~siP 91 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEAERG--LMARFGVAVCP 91 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGGHHH--HHHHHTCCSSS
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCCCHH--HHHHcCCccCC
Confidence 45789999999987666 99999999999 99999999999999999765 9999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
|+++|++| +.+.+..|....+.|.++|.+.+
T Consensus 92 TlilFkdG-~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 92 SLAVVQPE-RTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEEECC-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999976 88899999999999999998766
No 43
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=1.2e-17 Score=135.95 Aligned_cols=112 Identities=29% Similarity=0.593 Sum_probs=98.0
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+.+..+++++|+.++++. ++|+||++||++|+.+.|.+.++++.+.+. ++.|+.||++.+.. ++++|+|.++
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~v~~~~vd~~~~~~--~~~~~~v~~~ 78 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTEQPG--LSGRFIINAL 78 (126)
T ss_dssp CCCSEEECCTTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEETTTCHH--HHHHTTCCSS
T ss_pred CCCccEEecHHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccC--CeEEEEEECcCCHH--HHHHcCCccc
Confidence 35678899999999988543 899999999999999999999999998752 39999999998888 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCcccc
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEI 148 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i 148 (500)
|++++|++| + +.++.|..+.+.|.+|+.+.+.+.+..+
T Consensus 79 Pt~~~~~~G-~-~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 79 PTIYHCKDG-E-FRRYQGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp SEEEEEETT-E-EEECCSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred CEEEEEeCC-e-EEEeecCCCHHHHHHHHHHHhhccCCCc
Confidence 999999765 5 5899999999999999999887655554
No 44
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.75 E-value=2.1e-18 Score=134.55 Aligned_cols=97 Identities=28% Similarity=0.545 Sum_probs=86.2
Q ss_pred eccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCC
Q 010804 381 VADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSAS 459 (500)
Q Consensus 381 ~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~ 459 (500)
+.++|++.+.+ .++.++|+|||+||++|+.+.|.+.+++..+. ++.|+++|++.++.++++|+|+++||+++|.+|
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G 83 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQDNQIACMPTFLFMKNG 83 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHHcCCCeecEEEEEECC
Confidence 45688888854 47899999999999999999999999999886 499999999999999999999999999999876
Q ss_pred CceEEecCCCCHHHHHHHHHhh
Q 010804 460 GKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 460 ~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
..+.++.| .+.++|.+||+++
T Consensus 84 ~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 84 QKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEEEeC-cCHHHHHHHHHhc
Confidence 66778888 5899999999875
No 45
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.75 E-value=1.6e-17 Score=130.85 Aligned_cols=104 Identities=27% Similarity=0.649 Sum_probs=94.5
Q ss_pred CceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
+.+..+++++|...+ .++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK---VTVAKVNIDDNPE--TPNAYQVRSIP 76 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS---EEEEEEETTTCCH--HHHHTTCCSSS
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc---EEEEEEECCCCHH--HHHhcCCCccC
Confidence 458899999999765 78899999999999999999999999999999754 9999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
++++|++ |+...++.|..+.+.+.+|+.+.
T Consensus 77 t~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 77 TLMLVRD-GKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEEEET-TEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEEEeC-CEEEEEecCCCCHHHHHHHHHhc
Confidence 9999965 58888899999999999999875
No 46
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.75 E-value=1.1e-17 Score=140.22 Aligned_cols=109 Identities=28% Similarity=0.572 Sum_probs=100.0
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
....+..++.++|+..+.++++++|+||++||++|+.+.|.|.++++.+.+. +.|+.||++.++. ++++|+|.++
T Consensus 36 ~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~~~--l~~~~~v~~~ 110 (148)
T 3p2a_A 36 FDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK---VRFVKVNTEAEPA--LSTRFRIRSI 110 (148)
T ss_dssp TCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--HHHHTTCCSS
T ss_pred ccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc---eEEEEEECcCCHH--HHHHCCCCcc
Confidence 3456889999999999999999999999999999999999999999998654 9999999999888 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
|++++|++| +.+.++.|..+.+.|.+||.+.+..
T Consensus 111 Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 111 PTIMLYRNG-KMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp SEEEEEETT-EEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred CEEEEEECC-eEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999854 8888999999999999999987753
No 47
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.75 E-value=4.3e-18 Score=151.67 Aligned_cols=115 Identities=23% Similarity=0.549 Sum_probs=104.6
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
...+..++.++|+..+.++++++|+||++||++|+.+.|.|.++++.+.+. +.|+.|||+..+. +|++|+|.++|
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~P 170 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDDRM--LCRMKGVNSYP 170 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTCHH--HHHHTTCCSSS
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc---eEEEEEECCccHH--HHHHcCCCcCC
Confidence 456789999999999999999999999999999999999999999999764 9999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccCC
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKS 150 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~ 150 (500)
++++|++| +.+.++.|..+.+.|.+||.+.+++.+.+|++
T Consensus 171 t~~~~~~G-~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 171 SLFIFRSG-MAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp EEEEECTT-SCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred eEEEEECC-CceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 99999654 77889999999999999999999998888753
No 48
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.75 E-value=1.3e-17 Score=140.92 Aligned_cols=115 Identities=16% Similarity=0.241 Sum_probs=97.1
Q ss_pred cCceEEcCccChhhhhcc--CCeEEEEEEC-------CCChhhhhhhHHHHHHHHHhcCC--CCCeEEEEEecChhhhHH
Q 010804 30 KEFVLTLDHSNFSDTVSK--HNFIVVEFYA-------PWCGHCKKLAPEYEKAASELSSH--DPPVVLAKVDANEEANKE 98 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~~-------~~c~~C~~~~~~~~~~~~~~~~~--~~~v~~~~vd~~~~~~~~ 98 (500)
.+.|..||+++|++++.. +.+++|+||+ +||++|+.+.|.|+++++++.+. ++++.|+.||++..+.
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~-- 94 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ-- 94 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH--
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH--
Confidence 456889999999999854 4579999999 49999999999999999999621 1349999999999888
Q ss_pred HHHhcCcccccEEEEEecCCcee-----------eec---CC-CCCHHHHHHHHHhhcCCCcc
Q 010804 99 LASQYEIRGFPTIKILRNGGKTI-----------QEY---KG-PREADGIVEYLKKQSGPASA 146 (500)
Q Consensus 99 ~~~~~~i~~~P~~~~~~~~~~~~-----------~~~---~g-~~~~~~l~~~i~~~~~~~~~ 146 (500)
++++|||+++||+++|++|+... .+| .| .++.+.|.+||.+.++..+.
T Consensus 95 la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 95 LVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 99999999999999999886443 345 35 79999999999999986653
No 49
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.75 E-value=7.4e-18 Score=139.77 Aligned_cols=107 Identities=22% Similarity=0.427 Sum_probs=98.1
Q ss_pred cCceEEcCccChh-hhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTLDHSNFS-DTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l~~~~~~-~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
.+.+..+++++|. .++.++++++|+||++||++|+.+.|.|.++++.+.+. +.|+.||++..+. ++++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~ 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIATNPW--TAEKYGVQGT 79 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTCHH--HHHHHTCCEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCcCHh--HHHHCCCCcC
Confidence 4568899999999 66788999999999999999999999999999999764 9999999999888 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
|++++|++| +.+.++.|..+.+.|.+||.+.+.
T Consensus 80 Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 80 PTFKFFCHG-RPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp SEEEEEETT-EEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CEEEEEeCC-cEEEEEcCCCCHHHHHHHHHHHhc
Confidence 999999765 788899999999999999998874
No 50
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.75 E-value=1.4e-17 Score=134.40 Aligned_cols=111 Identities=49% Similarity=0.864 Sum_probs=97.5
Q ss_pred CCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCC---CCceEEEEEeCCCCCCCCCCCCcC
Q 010804 372 ENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN---DADVVIAKFDATANDIPGDTFEVQ 448 (500)
Q Consensus 372 ~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~---~~~~~~~~id~~~~~~~~~~~~i~ 448 (500)
...+.+..+++++|+..+.+.+++++|+||++||++|+.+.|.|.+++..+++ ..++.|+.+|++.++ .++ ++.
T Consensus 4 ~~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~ 80 (121)
T 2djj_A 4 GSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQ 80 (121)
T ss_dssp CCSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCS
T ss_pred cCCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccC
Confidence 35567999999999999867789999999999999999999999999999865 236999999999887 444 999
Q ss_pred cceEEEEEcCCCc--eEEecCCCCHHHHHHHHHhhcCCC
Q 010804 449 GYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 449 ~~P~~~~~~~~~~--~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|++++|+.|++ +.++.|..+.++|.+||++++...
T Consensus 81 ~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 81 GFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred cCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 9999999988877 678999999999999999987654
No 51
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.74 E-value=1.4e-16 Score=155.43 Aligned_cols=302 Identities=9% Similarity=0.121 Sum_probs=212.7
Q ss_pred ccccCChhhHhhhhccCCeEEEEEecCCCch---hHHHHHHHHHHhc------CCceEEEee---cccccCCCCCCCCC-
Q 010804 145 SAEIKSAEDASSFIGEKKVVIIGVFPNFSGE---EFENYTALAEKLR------SDYEFGHTQ---NAKLLPRGESSVTG- 211 (500)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~f~~~a~~~~------~~~~f~~~~---~~~~~~~~~~~~~~- 211 (500)
+..+ +.+++++.+.+++.+++.|+..++.. ..+.|.++|..+. +.+.|+.+. +.+++.+ +++..
T Consensus 7 v~~l-~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~--~~v~~~ 83 (382)
T 2r2j_A 7 ITSL-DTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQR--YRISKY 83 (382)
T ss_dssp -CBC-CTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHH--TTCCEE
T ss_pred eEEC-CHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHh--cCCCcC
Confidence 5566 56778888888899999999888854 5678899998883 458888887 4567777 88887
Q ss_pred CeEEEeccCCCcc-cccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhcCCCceEEEEEeCCCCCchHHHHHHH
Q 010804 212 PVVRLFKPFDELF-VDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYR 290 (500)
Q Consensus 212 p~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 290 (500)
|++++|+...... .|.|..+.+.|.+|+....-|.+..++.. ..+.. +......++.|+... .....+.+.
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~----~~l~~-l~~~~~~~v~ff~~~---~~~~~~~f~ 155 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDL----AEITT-LDRSKRNIIGYFEQK---DSDNYRVFE 155 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-----------------CCEEEEEESCS---SSHHHHHHH
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCH----HHHHH-hcCCCCEEEEEECCC---CChhHHHHH
Confidence 9999998754434 58999999999999999998888888652 34555 455666666666532 234567899
Q ss_pred HHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCC--Ccc-CCCCC-ChhhHHHHHHHHhcCCCCCcccc
Q 010804 291 EVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDG--QKY-LKPNL-DADQIAPWVKEYKEGKVPPFRKS 366 (500)
Q Consensus 291 ~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~--~~y-~~~~~-~~~~i~~fi~~~~~G~l~~~~~s 366 (500)
++|..++++ +.|+.... ++.+.++++ ..| +++...+. ... |.|.+ +.+.|.+||+...-
T Consensus 156 ~~A~~~~~~-~~F~~~~~----~~~~~~~v~--~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~--------- 218 (382)
T 2r2j_A 156 RVANILHDD-CAFLSAFG----DVSKPERYS--GDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV--------- 218 (382)
T ss_dssp HHHHHHTTT-CEEEEEES----CC----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS---------
T ss_pred HHHHHhhcc-ceEEEEeh----hhHHhhCCC--CCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc---------
Confidence 999999998 88887766 245667776 678 55554422 344 78888 99999999998641
Q ss_pred CCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCCh-hHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCC
Q 010804 367 EPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCG-HCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTF 445 (500)
Q Consensus 367 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~-~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~ 445 (500)
..+.+++.+++..+. ..+.+++++|+.++|. .|+.+...+.+++..+++ ++.|+.+|.+......+.+
T Consensus 219 --------p~v~elt~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~--~i~f~~id~~~~~~~~~~~ 287 (382)
T 2r2j_A 219 --------PLVREITFENGEELT-EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG--TINFLHADCDKFRHPLLHI 287 (382)
T ss_dssp --------CSSEECCHHHHHHHH-TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT--TSEEEEEETTTTHHHHHHT
T ss_pred --------CceEecChhhHHHHh-cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC--eeEEEEEchHHhHHHHHHc
Confidence 237789999998876 6788899999999874 455566666666666654 7999999999877666667
Q ss_pred CcC--cceEEEEEcCCCceEEec---CCCCHHHHHHHHHhhcCCCC
Q 010804 446 EVQ--GYPTVFFRSASGKTVPYE---GDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 446 ~i~--~~P~~~~~~~~~~~~~~~---g~~~~~~l~~~i~~~~~~~~ 486 (500)
++. .+|.++++..+ +...|. +..+.+.|.+|+++..+++.
T Consensus 288 gl~~~~~P~i~i~~~~-~~y~~~~~~~~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 288 QKTPADCPVIAIDSFR-HMYVFGDFKDVLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp TCCGGGCSEEEEECSS-CEEECCCSGGGGSTTHHHHHHHHHHHTTT
T ss_pred CCCccCCCEEEEEcch-hcCCCCccccccCHHHHHHHHHHHHCCCc
Confidence 776 78999998643 333332 44577999999999886655
No 52
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.74 E-value=5.8e-18 Score=132.92 Aligned_cols=98 Identities=12% Similarity=0.208 Sum_probs=79.4
Q ss_pred CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEec
Q 010804 37 DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRN 116 (500)
Q Consensus 37 ~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~ 116 (500)
+.++|++.++++++++|+||++||++|+.+.|.+.++++.+. ++.++.||++.++. ++++|+|.++|++++|++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~~--l~~~~~v~~~Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQE--IAGRYAVFTGPTVLLFYN 80 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC-----------CCCCEEEEEET
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCHH--HHHhcCCCCCCEEEEEeC
Confidence 567899999999999999999999999999999999999873 39999999999888 999999999999999985
Q ss_pred CCceeeecCCCCCHHHHHHHHHhhc
Q 010804 117 GGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 117 ~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
| +.+.++.|..+.+.|.+++.+.+
T Consensus 81 G-~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 G-KEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp T-EEEEEEESSCCHHHHHHHHHTTC
T ss_pred C-eEEEEEeCCcCHHHHHHHHHHhh
Confidence 4 88899999999999999998765
No 53
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.74 E-value=8.7e-18 Score=139.70 Aligned_cols=108 Identities=26% Similarity=0.507 Sum_probs=95.8
Q ss_pred ccCceEEcCccChhhhhcc------------CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh
Q 010804 29 SKEFVLTLDHSNFSDTVSK------------HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN 96 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~------------~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 96 (500)
..+.+..+++.+|...+.. +++++|+||++||++|+.+.|.+.++++.+.+. +.++.||++.+..
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---IYIYKVNVDKEPE 96 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc---eEEEEEECCCCHH
Confidence 4567889999999998854 889999999999999999999999999999764 9999999999888
Q ss_pred HHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 97 KELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 97 ~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
++++|+|.++|++++|+.+|+.. ++.|..+.+.|.++|.+.+.
T Consensus 97 --~~~~~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 97 --LARDFGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp --HHHHTTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC
T ss_pred --HHHHcCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHc
Confidence 99999999999999998776654 89999999999999998764
No 54
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.74 E-value=1.4e-17 Score=140.39 Aligned_cols=108 Identities=28% Similarity=0.628 Sum_probs=98.3
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
...+..+++++|...+.++++++|+||++||++|+.+.|.|+++++.+.+. +.|+.||++.++. ++++|+|.++|
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~~~--l~~~~~i~~~P 120 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAHPA--VAGRHRIQGIP 120 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTSTH--HHHHTTCCSSS
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCccHH--HHHHcCCCcCC
Confidence 345788999999999988899999999999999999999999999999764 9999999999888 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
++++|++ |+...++.|..+.+.|.+|+.+.++.
T Consensus 121 t~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 121 AFILFHK-GRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEEEET-TEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEeC-CeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999975 48888999999999999999988764
No 55
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.74 E-value=5.8e-18 Score=135.44 Aligned_cols=104 Identities=21% Similarity=0.536 Sum_probs=92.5
Q ss_pred cCceEEcCccChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 30 KEFVLTLDHSNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
.......+.++|++++. ++++++|+||++||++|+.+.|.+.++++.+.+ +.|+.||++..+. ++++|+|.+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~~~~--l~~~~~v~~ 84 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDDCQD--VASECEVKS 84 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTTTHH--HHHHTTCCS
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHH--HHHHcCCcc
Confidence 34456678999999997 899999999999999999999999999988743 8999999999888 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+|++++|++ |+.+.++.|. +.+.|.++|.+.+
T Consensus 85 ~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 85 MPTFQFFKK-GQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SSEEEEESS-SSEEEEEESC-CHHHHHHHHHHHC
T ss_pred ccEEEEEeC-CeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999999975 4788889999 9999999998753
No 56
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=3e-17 Score=134.97 Aligned_cols=113 Identities=44% Similarity=0.925 Sum_probs=100.4
Q ss_pred CCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceE
Q 010804 373 NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT 452 (500)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~ 452 (500)
..+.+..++.++|+..+.+.+++++|+||++||++|+.+.|.|.+++..++...++.|+.+|++.++.++++|++.++|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 34569999999999998667899999999999999999999999999999754479999999999999998999999999
Q ss_pred EEEEcCCCc--eEEec-CCCCHHHHHHHHHhhcCCC
Q 010804 453 VFFRSASGK--TVPYE-GDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 453 ~~~~~~~~~--~~~~~-g~~~~~~l~~~i~~~~~~~ 485 (500)
+++|+.|++ ..++. |..+.++|.+||++++.+.
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 999987765 34677 5599999999999998765
No 57
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.74 E-value=1.7e-17 Score=133.50 Aligned_cols=108 Identities=33% Similarity=0.647 Sum_probs=96.7
Q ss_pred cccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 28 ESKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 28 ~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
...+.+..+++++|.+.+ +.+++++|+||++||++|+.+.|.+.++++.+.+. +.++.||++.+.. ++++|+|.
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~---v~~~~vd~d~~~~--l~~~~~v~ 84 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK---VVMAKVDIDDHTD--LAIEYEVS 84 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---SEEEEEETTTTHH--HHHHTTCC
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCCCCHH--HHHHcCCC
Confidence 345778999999999865 67889999999999999999999999999998654 9999999999887 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++|++++|++ |+...++.|..+.+.|.+|+.+.+
T Consensus 85 ~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 85 AVPTVLAMKN-GDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp SSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cccEEEEEeC-CcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999999965 578889999999999999998765
No 58
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.73 E-value=1.4e-17 Score=135.65 Aligned_cols=105 Identities=27% Similarity=0.581 Sum_probs=94.9
Q ss_pred CceEEcCccChhhh-hccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLDHSNFSDT-VSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~~~~~~~~-~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
+.+..++.++|+.. +.++++++|+||++||++|+.+.|.+.++++.+.+. +.|+.||++.++. ++++|+|.++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~P 96 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK---LTVAKLNIDQNPG--TAPKYGIRGIP 96 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT---EEEEEEETTTCCT--TSGGGTCCSSS
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCCHH--HHHHcCCCccC
Confidence 45788999999965 478899999999999999999999999999998654 9999999999988 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++++|++ |+...++.|..+.+.|.+|+.+.+
T Consensus 97 t~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 97 TLLLFKN-GEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEEEET-TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeC-CEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9999965 588889999999999999998764
No 59
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.73 E-value=2.2e-17 Score=129.32 Aligned_cols=103 Identities=30% Similarity=0.624 Sum_probs=94.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
|..+++++|++.+.++++++|+||++||++|+.+.|.+.++++.+.+ +.++.+|++.++. ++++|++.++|+++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~--~~~~~~v~~~Pt~~ 74 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENPD--IAARYGVMSLPTVI 74 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHH--HHHHTTCCSSCEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCHH--HHHhCCccccCEEE
Confidence 45789999999999999999999999999999999999999998753 8999999999888 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+|++ |+...++.|..+.+.+.+|+.+.++
T Consensus 75 ~~~~-g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 75 FFKD-GEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEET-TEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEC-CeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9965 4778899999999999999998764
No 60
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.73 E-value=1e-17 Score=135.23 Aligned_cols=110 Identities=36% Similarity=0.718 Sum_probs=95.8
Q ss_pred ccCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCC--CCCeEEEEEecChhhhHHHHHhcCc
Q 010804 29 SKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSH--DPPVVLAKVDANEEANKELASQYEI 105 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~--~~~v~~~~vd~~~~~~~~~~~~~~i 105 (500)
..+.+..+++++|+..+ .++++++|+||++||++|+.+.|.|.++++.+.+. ..++.|+.|||+..+ +++ +|
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~--~v 79 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND---VPD--EI 79 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC---CSS--CC
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc---ccc--cc
Confidence 45678899999999986 78899999999999999999999999999999762 124999999998876 555 99
Q ss_pred ccccEEEEEecCCce-eeecCCCCCHHHHHHHHHhhcCC
Q 010804 106 RGFPTIKILRNGGKT-IQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 106 ~~~P~~~~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
.++|++++|++||+. ..+|.|..+.+.|.+|+.+.+..
T Consensus 80 ~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 80 QGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 999999999988663 68899999999999999988753
No 61
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.73 E-value=1.8e-17 Score=130.89 Aligned_cols=107 Identities=29% Similarity=0.594 Sum_probs=96.1
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|+..+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.++.++++|++.++|+++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 35788999999988877889999999999999999999999999999875 5999999999999999899999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+|+.|....++.|..+.++|.+||++.++
T Consensus 80 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 80 LFKNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 99655556688999999999999988653
No 62
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.73 E-value=1.9e-17 Score=131.68 Aligned_cols=107 Identities=25% Similarity=0.630 Sum_probs=94.3
Q ss_pred ccccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 27 AESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 27 ~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
...++....++.++|+++++++++++|+||++||++|+.+.|.+.++++.+. ++.++.||++..+. ++++|+|.
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~~~~--~~~~~~v~ 78 (112)
T 1syr_A 5 HHHHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDEVSE--VTEKENIT 78 (112)
T ss_dssp ----CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTTHH--HHHHTTCC
T ss_pred ccceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCCCHH--HHHHcCCC
Confidence 3445667889999999999999999999999999999999999999999875 29999999998887 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++|++++|++| +...++.|. +.+.|.+++.+.+
T Consensus 79 ~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 79 SMPTFKVYKNG-SSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp SSSEEEEEETT-EEEEEEESC-CHHHHHHHHHTTC
T ss_pred cccEEEEEECC-cEEEEEeCC-CHHHHHHHHHHhh
Confidence 99999999854 778889999 9999999998764
No 63
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.73 E-value=3.2e-17 Score=131.03 Aligned_cols=107 Identities=21% Similarity=0.536 Sum_probs=96.6
Q ss_pred cCceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
.+.+..+++++|...+ .++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~~~--~~~~~~v~~~ 80 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---LKVVKLEIDPNPT--TVKKYKVEGV 80 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEESTTCHH--HHHHTTCCSS
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc---EEEEEEEcCCCHH--HHHHcCCCce
Confidence 3458899999999775 78899999999999999999999999999998754 9999999998887 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
|++++|++ |+...++.|..+.+.+.+|+.+.++
T Consensus 81 Pt~~~~~~-G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 81 PALRLVKG-EQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp SEEEEEET-TEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred eEEEEEcC-CEEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999965 5888899999999999999998765
No 64
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.73 E-value=3.4e-17 Score=130.18 Aligned_cols=106 Identities=24% Similarity=0.558 Sum_probs=94.4
Q ss_pred CceEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
..|..+++++|...+ +++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~P 79 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK---IEIVKLNIDENPG--TAAKYGVMSIP 79 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--HHHHTTCCSSS
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC---eEEEEEEcCCCHH--HHHhCCCCccc
Confidence 347889999997655 67889999999999999999999999999998654 9999999998887 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
++++|++| +...++.|..+.+.+.+++.+.+.
T Consensus 80 t~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 80 TLNVYQGG-EVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999754 788899999999999999987653
No 65
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.73 E-value=6.8e-18 Score=134.06 Aligned_cols=107 Identities=18% Similarity=0.433 Sum_probs=97.8
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
..+..++.++|++.+.+.++.++|+||++||++|+.+.|.+.+++..+++ ++.|+.+|++.++.++++|++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 45889999999999977889999999999999999999999999999875 6999999999999999999999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+|.+|+.+.++.|..+.++|.+||+++++
T Consensus 82 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 82 YFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 99766667789999999999999998764
No 66
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.73 E-value=8.7e-18 Score=135.91 Aligned_cols=108 Identities=25% Similarity=0.497 Sum_probs=95.1
Q ss_pred cCceEEcCccChh-hhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTLDHSNFS-DTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l~~~~~~-~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
++.+..+++++|. .+++++++++|+||++||++|+.+.|.+.++++.+.+. +.|+.||++..+. ++++|+|.++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~--~~~~~~v~~~ 76 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK---VRAGKVDCQAYPQ--TCQKAGIKAY 76 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTCHH--HHHHTTCCSS
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCcCCHH--HHHHcCCCcc
Confidence 3557889999995 56688899999999999999999999999999999764 9999999999888 9999999999
Q ss_pred cEEEEEecCCceeeecCCC----CCHHHHHHHHHhhcCC
Q 010804 109 PTIKILRNGGKTIQEYKGP----READGIVEYLKKQSGP 143 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~~~ 143 (500)
|++++|++|+. ..++.|. .+.+.|.+|+.+.+..
T Consensus 77 Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 77 PSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp SEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred ceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHHh
Confidence 99999988755 5677775 8999999999987753
No 67
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=9.9e-18 Score=137.86 Aligned_cols=115 Identities=30% Similarity=0.611 Sum_probs=99.6
Q ss_pred cccCceEEcCccChhhhhc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 28 ESKEFVLTLDHSNFSDTVS-KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 28 ~~~~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
.....|..++.++|...+. ++++++|+||++||++|+.+.|.|.++++.+.+. +++.++.|||+.+.. ++++|+|.
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~~--~~~~~~v~ 80 (133)
T 2dj3_A 4 GSSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATANDI--TNDQYKVE 80 (133)
T ss_dssp CSSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSCC--CCSSCCCS
T ss_pred cCCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCHH--HHhhcCCC
Confidence 3466789999999999985 5899999999999999999999999999999742 359999999999888 99999999
Q ss_pred cccEEEEEecCCcee-eecC-CCCCHHHHHHHHHhhcCCCc
Q 010804 107 GFPTIKILRNGGKTI-QEYK-GPREADGIVEYLKKQSGPAS 145 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~-~~~~-g~~~~~~l~~~i~~~~~~~~ 145 (500)
++|++++|++|+... ..|. |..+.+.|.+||.+.+....
T Consensus 81 ~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 81 GFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp SSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred cCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 999999999875432 3678 56999999999999987543
No 68
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.72 E-value=4.4e-17 Score=132.67 Aligned_cols=106 Identities=28% Similarity=0.566 Sum_probs=95.8
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|++.+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.|+.+|++.+..++++|++.++|+++
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 34889999999988777899999999999999999999999999999875 5999999999999999999999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+|..|..+.++.|..+.++|.+||++.+
T Consensus 100 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9965554668999999999999998865
No 69
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.72 E-value=4.4e-18 Score=136.46 Aligned_cols=106 Identities=18% Similarity=0.140 Sum_probs=97.4
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCC--hhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWC--GHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
....++.++|++.+.+.+++++|+||++|| ++|+.+.|.+.+++..+.+ ++.|+++|++.++.+..+|+|+++||+
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 466899999999996666699999999999 9999999999999999976 699999999999999999999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
++|++|+.+.+..|..+.+.|.++|+++++
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999877778899999999999999998873
No 70
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.72 E-value=3e-17 Score=129.34 Aligned_cols=103 Identities=30% Similarity=0.605 Sum_probs=93.0
Q ss_pred eEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEE
Q 010804 33 VLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTI 111 (500)
Q Consensus 33 v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~ 111 (500)
|..+++++|...+ +++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~Pt~ 77 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK---LKCVKLNTDESPN--VASEYGIRSIPTI 77 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--HHHHHTCCSSCEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc---eEEEEEECCCCHH--HHHHCCCCcCCEE
Confidence 6788999999865 67889999999999999999999999999998654 9999999998887 9999999999999
Q ss_pred EEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 112 KILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++|++ |+...++.|..+.+.+.+++.+.+
T Consensus 78 ~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 78 MVFKG-GKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEESS-SSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEeC-CEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99975 477889999999999999998765
No 71
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.72 E-value=3.7e-17 Score=129.17 Aligned_cols=100 Identities=28% Similarity=0.594 Sum_probs=90.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
....+.++|+.++.++++++|+||++||++|+.+.|.+.++++.+.+ +.|+.||++..+. ++++|+|.++|+++
T Consensus 9 ~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~~~~--l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 9 TQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDELGD--VAQKNEVSAMPTLL 82 (109)
T ss_dssp EECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHH--HHHHTTCCSSSEEE
T ss_pred cCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCCCHH--HHHHcCCCccCEEE
Confidence 45678889999999999999999999999999999999999998753 8999999998888 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
+|++ |+.+.++.|. +.+.|.++|.+.
T Consensus 83 ~~~~-G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 83 LFKN-GKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEET-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEC-CEEEEEEeCC-CHHHHHHHHHhh
Confidence 9995 5888899998 779999999875
No 72
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=9.5e-18 Score=137.97 Aligned_cols=112 Identities=33% Similarity=0.588 Sum_probs=99.9
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCC--CCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN--DADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~--~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
...+..++.++|++.+.+.++.++|+||++||++|+.+.|.|.+++..++. ..++.|+.+|++.+..++++|++.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 455889999999998877789999999999999999999999999998861 126999999999999998889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++++|++|+.+.++.|..+.++|.+||++.+...
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 9999988666778999999999999999988653
No 73
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.72 E-value=8.2e-18 Score=135.42 Aligned_cols=107 Identities=11% Similarity=0.087 Sum_probs=96.1
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhcCCCCC-eEEEEEecChhhhHHHHHhcCcccc
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPW--CGHCKKLAPEYEKAASELSSHDPP-VVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~--c~~C~~~~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
.+..+++++|++.+..+++++|+||++| |++|+.+.|.++++++++. ++ +.|+.||.+.++. ++.+|||+++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~---g~~v~~~KVdvDe~~~--lA~~ygV~sI 92 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP---DYTWQVAIADLEQSEA--IGDRFGAFRF 92 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT---TSCCEEEECCHHHHHH--HHHHHTCCSS
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC---CCeEEEEEEECCCCHH--HHHHcCCccC
Confidence 3568999999999988889999999999 9999999999999999984 34 8999999999888 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
||+++|++| +.+.+..|..+.+.|.++|.+.+..+
T Consensus 93 PTlilFk~G-~~v~~~~G~~~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 93 PATLVFTGG-NYRGVLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp SEEEEEETT-EEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred CEEEEEECC-EEEEEEecCCCHHHHHHHHHHHhcCC
Confidence 999999976 88899999999999999999877543
No 74
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.72 E-value=3.7e-17 Score=134.83 Aligned_cols=107 Identities=29% Similarity=0.498 Sum_probs=95.3
Q ss_pred CceEEcCccChhhhhc------------cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHH
Q 010804 31 EFVLTLDHSNFSDTVS------------KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKE 98 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~------------~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~ 98 (500)
..+..+++++|...+. ++++++|+||++||++|+.+.|.+.++++.+.+. +.++.||++.+..
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~~-- 83 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ---IVIYKVDTEKEQE-- 83 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---EEEEEEeCCCCHH--
Confidence 4578899999999875 4689999999999999999999999999998754 9999999998887
Q ss_pred HHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 99 LASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 99 ~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
++++|+|.++|++++|+.+|+.. .+.|..+.+.|.+||.+.++.
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHcCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 99999999999999996555665 789999999999999988754
No 75
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.72 E-value=5.5e-17 Score=127.31 Aligned_cols=103 Identities=29% Similarity=0.617 Sum_probs=92.6
Q ss_pred eEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEE
Q 010804 33 VLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTI 111 (500)
Q Consensus 33 v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~ 111 (500)
|..+++++|...+ .++++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.++. ++++|+|.++|++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDEAPG--IATQYNIRSIPTV 76 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--HHHHTTCCSSSEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc---eEEEEEcCcchHH--HHHhCCCCcccEE
Confidence 5678999999966 56889999999999999999999999999998764 9999999998887 9999999999999
Q ss_pred EEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 112 KILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+++++| +...++.|..+.+.+.+++.+.+
T Consensus 77 ~~~~~g-~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 77 LFFKNG-ERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEEETT-EEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEEeCC-eEEEEEecCCCHHHHHHHHHhhC
Confidence 999754 78888999999999999998753
No 76
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.72 E-value=5.2e-17 Score=132.10 Aligned_cols=108 Identities=14% Similarity=0.206 Sum_probs=95.2
Q ss_pred ceEEcCccChh-----hhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEe--cChhhhHHHHHhcC
Q 010804 32 FVLTLDHSNFS-----DTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVD--ANEEANKELASQYE 104 (500)
Q Consensus 32 ~v~~l~~~~~~-----~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd--~~~~~~~~~~~~~~ 104 (500)
.+..++..+|+ ....++++++|+||++||++|+.+.|.+.++++.+.+. +.++.|| ++.+.. ++++|+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~d~~~~--~~~~~~ 79 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGK---FNIYYARLEEEKNID--LAYKYD 79 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSS---CEEEEEETTSSHHHH--HHHHTT
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCC---eEEEEEeCCCCchHH--HHHHcC
Confidence 34566777777 67788999999999999999999999999999998643 9999999 888777 999999
Q ss_pred cccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 105 IRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 105 i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
|.++|++++|+.+|+...++.|..+.+.|.+++.+...+.
T Consensus 80 v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 80 ANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp CCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred CcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 9999999999966688889999999999999999988654
No 77
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.72 E-value=4.1e-17 Score=129.66 Aligned_cols=107 Identities=23% Similarity=0.413 Sum_probs=96.1
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
+..++.++|++.+ .+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+..++++|++.++|++++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 6788999999988 788999999999999999999999999999875 699999999999999999999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
..|..+.++.|..+.++|.+||+++.+...+
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 109 (112)
T 2voc_A 79 KDGEVVETSVGFKPKEALQELVNKHLLEHHH 109 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHTTSCSCCC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHHHhhcc
Confidence 5555466899999999999999988876543
No 78
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.71 E-value=7.6e-17 Score=127.93 Aligned_cols=104 Identities=32% Similarity=0.573 Sum_probs=91.2
Q ss_pred cCceEEcCccChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC-hhhhHHHHHhcCcc
Q 010804 30 KEFVLTLDHSNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN-EEANKELASQYEIR 106 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~~~i~ 106 (500)
.+.+..+++++|...+. ++++++|+||++||++|+.+.|.+.++++.+.+ +.|+.||++ .... ++++|+|.
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~----v~~~~vd~~~~~~~--~~~~~~v~ 77 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD----VIFLKLDCNQENKT--LAKELGIR 77 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHH--HHHHHCCS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----eEEEEEecCcchHH--HHHHcCCC
Confidence 45688999999999986 588999999999999999999999999998753 899999998 5666 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++|+++++++| +...++.|.. .+.|.++|.+.+
T Consensus 78 ~~Pt~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 78 VVPTFKILKEN-SVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp BSSEEEEESSS-SEEEEEESSC-HHHHHHHHHHHH
T ss_pred eeeEEEEEeCC-cEEEEEcCCC-HHHHHHHHHHhh
Confidence 99998888765 7778899985 899999998754
No 79
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.71 E-value=4.8e-17 Score=131.73 Aligned_cols=105 Identities=29% Similarity=0.455 Sum_probs=94.1
Q ss_pred cCceEEcCc-cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTLDH-SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l~~-~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
...+..+++ ++|+.++.++++++|+||++||++|+.+.|.+.++++.+. ++.|+.||++.+.. ++++|+|.++
T Consensus 18 ~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~~--l~~~~~v~~~ 91 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNSE--IVSKCRVLQL 91 (125)
T ss_dssp CSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCHH--HHHHTTCCSS
T ss_pred ccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCHH--HHHHcCCCcc
Confidence 345888999 9999999999999999999999999999999999999873 39999999998887 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
|++++|++| +.+.++.| .+.+.|.++|.+.+.
T Consensus 92 Pt~~i~~~G-~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 92 PTFIIARSG-KMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp SEEEEEETT-EEEEEEES-SCHHHHHHHHHHHHH
T ss_pred cEEEEEeCC-eEEEEEeC-CCHHHHHHHHHHHhc
Confidence 999999755 77888999 688999999987653
No 80
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.71 E-value=2.8e-17 Score=133.60 Aligned_cols=103 Identities=14% Similarity=0.273 Sum_probs=90.1
Q ss_pred eEEcCc-cChhhhh--ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 33 VLTLDH-SNFSDTV--SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 33 v~~l~~-~~~~~~~--~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
+..++. .+|++.+ .++++++|.||++||++|+.+.|.++++++++.+. +.|+.||.++.++ ++.+|+|.+.|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe~~e--~a~~y~V~siP 97 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITEVPD--FNTMYELYDPV 97 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCCT--TTTTTTCCSSE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCCCHH--HHHHcCCCCCC
Confidence 555654 7898877 36789999999999999999999999999999765 9999999999999 99999999999
Q ss_pred EEEEEecCCcee--e-------ecCCCCC-HHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTI--Q-------EYKGPRE-ADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~--~-------~~~g~~~-~~~l~~~i~~~~ 141 (500)
|++||.+| +.+ . +..|... .+.|.++|...+
T Consensus 98 T~~fFk~G-~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 98 SVMFFYRN-KHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEEEETT-EEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 99999987 554 4 7889877 899999998765
No 81
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.71 E-value=1.6e-17 Score=138.06 Aligned_cols=111 Identities=26% Similarity=0.509 Sum_probs=98.4
Q ss_pred CCCCCeEEEeccchhhhhhc-----------CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCC
Q 010804 372 ENNEPVKVLVADSLQDMVFN-----------SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDI 440 (500)
Q Consensus 372 ~~~~~~~~l~~~~~~~~~~~-----------~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~ 440 (500)
..++.+..++.++|...+.+ .+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPE 96 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHH
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHH
Confidence 44567899999999999865 478999999999999999999999999999976 69999999999999
Q ss_pred CCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 441 PGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 441 ~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++++|++.++|++++|+.++++.++.|..+.++|.+||++.+.+
T Consensus 97 ~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 97 LARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp HHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC-
T ss_pred HHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHcc
Confidence 99999999999999998888877999999999999999988764
No 82
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.71 E-value=4.3e-17 Score=134.42 Aligned_cols=115 Identities=30% Similarity=0.531 Sum_probs=101.1
Q ss_pred CCCeEEEeccchhhhhhc-----------CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCC
Q 010804 374 NEPVKVLVADSLQDMVFN-----------SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPG 442 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~-----------~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~ 442 (500)
...+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~ 85 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQELA 85 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHH
Confidence 456889999999998853 468999999999999999999999999999875 5999999999998888
Q ss_pred CCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCCCCC
Q 010804 443 DTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKET 490 (500)
Q Consensus 443 ~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~ 490 (500)
++|++.++|++++|+.+++.+++.|..+.++|.+||++.+....+..+
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 133 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKKEGHHH 133 (136)
T ss_dssp HHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTSCTTSSC
T ss_pred HHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhccCCCCC
Confidence 889999999999996666666889999999999999999877655443
No 83
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.71 E-value=6e-17 Score=130.73 Aligned_cols=107 Identities=23% Similarity=0.572 Sum_probs=95.5
Q ss_pred cCceEEcCccChhhh-hccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTLDHSNFSDT-VSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~-~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
...+..+++.+|... +.++++++|+||++||++|+.+.|.+.++++.+.+. +.++.||++.++. ++++|+|.++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~i~~~ 85 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATD---LTVAKLDVDTNPE--TARNFQVVSI 85 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHH--HHHHTTCCSS
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEECCCCHH--HHHhcCCCcC
Confidence 456888999999865 477889999999999999999999999999998654 9999999998887 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
|++++|++ |+...++.|..+.+.+.+++.+.++
T Consensus 86 Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 86 PTLILFKD-GQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp SEEEEEET-TEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred CEEEEEEC-CEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999985 4788899999999999999988764
No 84
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.71 E-value=5.8e-17 Score=128.86 Aligned_cols=104 Identities=28% Similarity=0.590 Sum_probs=92.0
Q ss_pred ceEEc-CccChhhhhcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 32 FVLTL-DHSNFSDTVSK----HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 32 ~v~~l-~~~~~~~~~~~----~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
.+..+ +.++|+..+.+ +++++|+||++||++|+.+.|.+.++++.+.+. +.++.+|++.... ++++|+|.
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~~~--~~~~~~v~ 77 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK---VIFLKVDVDAVAA--VAEAAGIT 77 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTTHH--HHHHHTCC
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCC---eEEEEEECCchHH--HHHHcCCC
Confidence 45666 56889999875 899999999999999999999999999998653 9999999998887 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
++|++++|++| +...++.|. +.+.|.+++.+.+.
T Consensus 78 ~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 78 AMPTFHVYKDG-VKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp BSSEEEEEETT-EEEEEEESC-CHHHHHHHHHHHHC
T ss_pred cccEEEEEECC-eEEEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999754 778889998 99999999988653
No 85
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.71 E-value=5.8e-17 Score=132.17 Aligned_cols=99 Identities=23% Similarity=0.462 Sum_probs=89.8
Q ss_pred EcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEE
Q 010804 35 TLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKIL 114 (500)
Q Consensus 35 ~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~ 114 (500)
.++.+.++....++++++|+||++||++|+.+.|.+.++++.+.+. +.++.||++..+. ++++|+|.++|++++|
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---v~~~~vd~d~~~~--l~~~~~v~~~Pt~~~~ 103 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR---IYLLKVDLDKNES--LARKFSVKSLPTIILL 103 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---EEEEEEEGGGCHH--HHHHTTCCSSSEEEEE
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCCHH--HHHHcCCCCcCEEEEE
Confidence 4566667778889999999999999999999999999999999754 9999999999888 9999999999999999
Q ss_pred ecCCceeeecCCCCCHHHHHHHHHh
Q 010804 115 RNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 115 ~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
++ |+.+.++.|..+.+.|.+|+.+
T Consensus 104 ~~-G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 104 KN-KTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp ET-TEEEEEESSCCCHHHHHHHHTT
T ss_pred EC-CEEEEEecCCCCHHHHHHHHHh
Confidence 75 5888899999999999999975
No 86
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.71 E-value=9.7e-17 Score=126.13 Aligned_cols=102 Identities=27% Similarity=0.671 Sum_probs=90.9
Q ss_pred eEEcCc-cChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 33 VLTLDH-SNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 33 v~~l~~-~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
+..+++ ++|+..+. ++++++|.||++||++|+.+.|.+.++++.+++. +.++.+|++..+. ++++|+|.++|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~P 76 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN---VVVLKVDVDECED--IAMEYNISSMP 76 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCHH--HHHHTTCCSSS
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCC---eEEEEEeccchHH--HHHHcCCCccc
Confidence 567788 88999987 7899999999999999999999999999998643 9999999998887 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++++|++| +...++.| .+.+.+.+++.+.+
T Consensus 77 t~~~~~~G-~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 77 TFVFLKNG-VKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEEEETT-EEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEEEcCC-cEEEEEcC-CCHHHHHHHHHHhC
Confidence 99999765 77889999 78899999998753
No 87
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=2.6e-17 Score=136.65 Aligned_cols=114 Identities=35% Similarity=0.691 Sum_probs=100.1
Q ss_pred CCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCC-CceEEEEEeCCCCCCCCCCCCcCcc
Q 010804 372 ENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGY 450 (500)
Q Consensus 372 ~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~id~~~~~~~~~~~~i~~~ 450 (500)
.....+..++.++|+..+ ..++.++|+||++||++|+.+.|.|.+++..+++. .++.|+.+|++.+..++++|++.++
T Consensus 14 ~~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 92 (140)
T 2dj1_A 14 KEENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGY 92 (140)
T ss_dssp EEETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSS
T ss_pred CCCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCcc
Confidence 344669999999999987 56899999999999999999999999999988642 3599999999999888888999999
Q ss_pred eEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 451 PTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 451 P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
|++++|..|. +.++.|..+.++|.+||+++++.+..
T Consensus 93 Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 93 PTIKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp SEEEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred CeEEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCC
Confidence 9999996555 77899999999999999999876544
No 88
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.71 E-value=9.4e-17 Score=126.47 Aligned_cols=101 Identities=26% Similarity=0.496 Sum_probs=87.5
Q ss_pred eEEc-CccChhhhh--ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 33 VLTL-DHSNFSDTV--SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 33 v~~l-~~~~~~~~~--~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
+..+ +.++|.+.+ .++++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++..+. ++++|+|.++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~~--~~~~~~v~~~P 76 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQG--TAATNNISATP 76 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHH--HHHHTTCCSSS
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCHH--HHHhcCCCccc
Confidence 3444 668999999 578999999999999999999999999999973 39999999998887 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++++|++| +...++.|.. .+.|.+|+.+.+
T Consensus 77 t~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 77 TFQFFRNK-VRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp EEEEEETT-EEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEEEECC-eEEEEEeCCC-HHHHHHHHHHhc
Confidence 99999765 7788899954 456999998765
No 89
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.71 E-value=5.2e-17 Score=127.93 Aligned_cols=105 Identities=24% Similarity=0.484 Sum_probs=94.7
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+++ ++.|+.+|++.++..+++|++.++|+++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLM 79 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEE
Confidence 35888999999988877889999999999999999999999999999875 6999999999999888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhh
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
+|+.|..+.++.|..+.+.+.+||+++
T Consensus 80 ~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 996555566889999999999999875
No 90
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.71 E-value=7.1e-17 Score=130.91 Aligned_cols=104 Identities=33% Similarity=0.609 Sum_probs=91.5
Q ss_pred cCceEEcCccChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC-hhhhHHHHHhcCcc
Q 010804 30 KEFVLTLDHSNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN-EEANKELASQYEIR 106 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~~~i~ 106 (500)
...+..+++++|...+. ++++++|+||++||++|+.+.|.+.++++++.+ +.++.+|++ .... ++++|+|.
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~--~~~~~~v~ 90 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD----VIFLKLDCNQENKT--LAKELGIR 90 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHH--HHHHHCCS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC----CEEEEEecCcchHH--HHHHcCCC
Confidence 45688999999999886 688999999999999999999999999998753 899999998 4566 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++|+++++++| +...++.|.. .+.+.+++.+..
T Consensus 91 ~~Pt~~~~~~G-~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 91 VVPTFKILKEN-SVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SSSEEEEEETT-EEEEEEESSC-HHHHHHHHHHHT
T ss_pred eeeEEEEEeCC-cEEEEEcCCC-HHHHHHHHHHhh
Confidence 99999999865 7778899986 899999998754
No 91
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.70 E-value=5.3e-17 Score=127.39 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=78.4
Q ss_pred eccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCC
Q 010804 381 VADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASG 460 (500)
Q Consensus 381 ~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~ 460 (500)
+.++|++.+ +.+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.++.++++|++.++|++++|.+|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 567788877 678999999999999999999999999999884 5999999999999999999999999999997666
Q ss_pred ceEEecCCCCHHHHHHHHHhhc
Q 010804 461 KTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 461 ~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
.+.++.|..+.++|.++|++++
T Consensus 83 ~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEEeCCcCHHHHHHHHHHhh
Confidence 6778999999999999999865
No 92
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=2.1e-17 Score=135.23 Aligned_cols=109 Identities=32% Similarity=0.572 Sum_probs=99.5
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
.+.+..++.++|+..+.+.+++++|+||++||++|+.+.|.|.+++..+++ .+.|+.+|++.+..++++|++.++|++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 356899999999998877889999999999999999999999999999876 599999999999888888999999999
Q ss_pred EEEcCCCc-eEEecCCCCHHHHHHHHHhhcCC
Q 010804 454 FFRSASGK-TVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 454 ~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++|++|+. +.++.|..+.++|.+||.+.+.+
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSALRS 125 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHHHhc
Confidence 99988887 77899999999999999988754
No 93
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.70 E-value=8.9e-17 Score=129.91 Aligned_cols=105 Identities=21% Similarity=0.510 Sum_probs=93.4
Q ss_pred cCceEEcCccChhhhhc----cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCc
Q 010804 30 KEFVLTLDHSNFSDTVS----KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEI 105 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~----~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i 105 (500)
...+..++.++|+..+. ++++++|+||++||++|+.+.|.+.++++.+.+ +.|+.||++.++. ++++|+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~--~~~~~~v 85 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDELKP--IAEQFSV 85 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHH--HHHHTTC
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCCHH--HHHHcCC
Confidence 44567789999999885 489999999999999999999999999998753 8999999998887 9999999
Q ss_pred ccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 106 RGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 106 ~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
.++|++++|++| +...++.|.. .+.|.+|+.+.+.
T Consensus 86 ~~~Pt~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 86 EAMPTFLFMKEG-DVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp CSSSEEEEEETT-EEEEEEESSC-HHHHHHHHHHHHS
T ss_pred CcccEEEEEeCC-EEEEEEeCcC-HHHHHHHHHHHhc
Confidence 999999999754 7788999999 9999999998764
No 94
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.70 E-value=4.2e-18 Score=137.10 Aligned_cols=107 Identities=9% Similarity=0.138 Sum_probs=97.2
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCC--ChhHhhhhHHHHHHHHHcCCCCc-eEEEEEeCCCCCCCCCCCCcCcceE
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPW--CGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPT 452 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~~~~~~~~~~-~~~~~id~~~~~~~~~~~~i~~~P~ 452 (500)
.+..++.++|++.+ ..+++++|+||++| |++|+.+.|.+.+++..+.+ + +.|+++|++.++.+..+|+|+++||
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 46789999999999 47788999999999 99999999999999999976 6 9999999999999999999999999
Q ss_pred EEEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 453 VFFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+++|++|+.+.+..|..+.+.|.++|+++++.+
T Consensus 95 lilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 95 TLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred EEEEECCEEEEEEecCCCHHHHHHHHHHHhcCC
Confidence 999987777889999999999999999988543
No 95
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.70 E-value=4.5e-17 Score=129.24 Aligned_cols=105 Identities=31% Similarity=0.586 Sum_probs=95.0
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCC-CceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
+.+..++.++|++.+. ++.++|+||++||++|+.+.|.+.+++..+... .++.++.+|++.+..+++++++.++|++
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 4588999999999995 789999999999999999999999999887532 4799999999999989999999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhh
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
++|..|+.+.++.|..+.++|.+||+++
T Consensus 83 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 9997776677999999999999999876
No 96
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.70 E-value=9.9e-17 Score=127.49 Aligned_cols=103 Identities=24% Similarity=0.498 Sum_probs=87.6
Q ss_pred eEEcCc-cChhhhhcc---CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 33 VLTLDH-SNFSDTVSK---HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 33 v~~l~~-~~~~~~~~~---~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
|..+++ ++|++.+.+ +++++|+||++||++|+.+.|.+.++++.++. +++.|+.||++.++. ++++|+|.++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~--~~~~~~v~~~ 77 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN--SNVSFLSIDADENSE--ISELFEISAV 77 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG--TTSEEEEEETTTCHH--HHHHTTCCSS
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC--CCEEEEEEecccCHH--HHHHcCCCcc
Confidence 567787 899999976 89999999999999999999999999998643 239999999998887 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
|++++|++ |+...++.|.. .+.|.+++.+.+
T Consensus 78 Pt~~~~~~-G~~~~~~~G~~-~~~l~~~l~~~~ 108 (112)
T 3d6i_A 78 PYFIIIHK-GTILKELSGAD-PKEYVSLLEDCK 108 (112)
T ss_dssp SEEEEEET-TEEEEEECSCC-HHHHHHHHHHHH
T ss_pred cEEEEEEC-CEEEEEecCCC-HHHHHHHHHHHH
Confidence 99999975 48888999974 556999998765
No 97
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.69 E-value=2.9e-17 Score=132.64 Aligned_cols=105 Identities=28% Similarity=0.616 Sum_probs=89.4
Q ss_pred CceEEcCccChhhh-hccCCeEEEEEECCCCh--------------hhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh
Q 010804 31 EFVLTLDHSNFSDT-VSKHNFIVVEFYAPWCG--------------HCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA 95 (500)
Q Consensus 31 ~~v~~l~~~~~~~~-~~~~~~~lv~f~~~~c~--------------~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~ 95 (500)
+.+..+++++|++. ++++++++|+||++||+ +|+.+.|.++++++.+.+. +.++.||++.++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~---~~~~~vd~d~~~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC---eEEEEEECCCCH
Confidence 45788999999855 57889999999999999 9999999999999888654 999999999998
Q ss_pred hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 96 NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 96 ~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
. ++++|+|.++|++++|++ |+...++.|..+.+.+.+|+.+.+
T Consensus 80 ~--l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 G--TAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp T--TGGGGTCCBSSEEEEEES-SSEEEEEESCCCHHHHHHHHTTTC
T ss_pred H--HHHHcCCCccCEEEEEEC-CEEEEEEeCCCCHHHHHHHHHHHh
Confidence 8 999999999999999965 588889999999999999998765
No 98
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.69 E-value=1.1e-16 Score=150.17 Aligned_cols=108 Identities=24% Similarity=0.524 Sum_probs=98.9
Q ss_pred cCceEEcCccChhhhhcc--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 30 KEFVLTLDHSNFSDTVSK--HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
.+.|..+++++|+.++.. +++++|+||++||++|+.+.|.|.++++++.+. +.|+.|||+.++. ++++|+|.+
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~~~--~~~~~~v~~ 80 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---FILAKLDCDAEQM--IAAQFGLRA 80 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS---SEEEEEETTTCHH--HHHTTTCCS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC---eEEEEEeCccCHH--HHHHcCCCC
Confidence 456899999999999864 899999999999999999999999999999764 9999999999887 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
+||+++|++| +.+.++.|..+.+.+.+|+...++.
T Consensus 81 ~Pt~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 81 IPTVYLFQNG-QPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp SSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CCeEEEEECC-EEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 9999999754 8888999999999999999998854
No 99
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.69 E-value=5.5e-17 Score=128.97 Aligned_cols=107 Identities=27% Similarity=0.512 Sum_probs=96.2
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+...+++|++.++|+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 45789999999988877889999999999999999999999999999865 5999999999998888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+|+.|....++.|..+.+++.++|++.+.
T Consensus 83 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 83 VYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99766556689999999999999988764
No 100
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.69 E-value=1.5e-16 Score=142.90 Aligned_cols=112 Identities=26% Similarity=0.570 Sum_probs=100.7
Q ss_pred ccccCceEEcCccChhhh-hccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCc
Q 010804 27 AESKEFVLTLDHSNFSDT-VSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEI 105 (500)
Q Consensus 27 ~~~~~~v~~l~~~~~~~~-~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i 105 (500)
+.....+..+++++|+.. ++++++++|+||++||++|+.+.|.|.++++.+.+. +.|+.|||+..+. ++++|+|
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~~--l~~~~~v 82 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNPG--TAPKYGI 82 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCTT--TGGGGTC
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCCHH--HHHHcCC
Confidence 344566889999999984 688999999999999999999999999999999764 9999999999988 9999999
Q ss_pred ccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 106 RGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 106 ~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
.++|++++|++| +.+.++.|..+.+.+.+|+.+.+...
T Consensus 83 ~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 83 RGIPTLLLFKNG-EVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp CSBSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CcCCEEEEEECC-eEEEEeccccChHHHHHHHHhhcccc
Confidence 999999999865 78889999999999999999988654
No 101
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.69 E-value=6.1e-17 Score=127.28 Aligned_cols=103 Identities=24% Similarity=0.458 Sum_probs=94.3
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEE
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFF 455 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~ 455 (500)
.+..++.++|++.+ .+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+...+++|++.++|++++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 47889999999998 789999999999999999999999999999976 59999999999998999999999999999
Q ss_pred EcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 456 RSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
|+.|+.+.++.|..+.+++.++|++++
T Consensus 80 ~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 986666778999999999999998753
No 102
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.69 E-value=6.4e-17 Score=129.26 Aligned_cols=108 Identities=20% Similarity=0.502 Sum_probs=96.4
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|.+.+...+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..++++|++.++|+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 45889999999998877889999999999999999999999999999876 5999999999998888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+|+.|....++.|..+.+++.+||++.+++
T Consensus 85 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 85 LVKGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEcCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 996555466789999999999999988754
No 103
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.69 E-value=1.2e-16 Score=125.31 Aligned_cols=97 Identities=24% Similarity=0.635 Sum_probs=87.6
Q ss_pred CccChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEE
Q 010804 37 DHSNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKIL 114 (500)
Q Consensus 37 ~~~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~ 114 (500)
+.++|+..+. ++++++|+||++||++|+.+.|.+.++++.+.+ +.++.+|++..+. ++++|+|.++|++++|
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~~~~--~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDDCQD--VASESEVKSMPTFQFF 80 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTTCHH--HHHHTTCCBSSEEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhhhHH--HHHHcCCCcCcEEEEE
Confidence 5678888887 789999999999999999999999999998753 8999999998888 9999999999999999
Q ss_pred ecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 115 RNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 115 ~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++| +.+.++.|. +.+.+.+++.+.+
T Consensus 81 ~~g-~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 81 KKG-QKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHHC
T ss_pred ECC-eEEEEEeCC-CHHHHHHHHHHhC
Confidence 765 788899999 9999999998753
No 104
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.69 E-value=3.9e-17 Score=131.34 Aligned_cols=110 Identities=25% Similarity=0.446 Sum_probs=97.4
Q ss_pred CCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 372 ENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 372 ~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
...+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.|.+++..+++ ++.++.+|++.+..++++|++.++|
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~P 87 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSAVP 87 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCccc
Confidence 34456888999999998877889999999999999999999999999999865 6999999999998888889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
++++|+.|..+.++.|..+.++|.+||++.++
T Consensus 88 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 99999655546688999999999999988653
No 105
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.69 E-value=6.1e-17 Score=127.98 Aligned_cols=105 Identities=20% Similarity=0.432 Sum_probs=95.4
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+++ ++.|+.+|++.+..++++|++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 457889999999988 5589999999999999999999999999999976 6999999999999999899999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+|..|..+.++.|..+.++|.++|++++
T Consensus 81 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9966666778999999999999999875
No 106
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.69 E-value=2.3e-16 Score=143.89 Aligned_cols=113 Identities=56% Similarity=1.055 Sum_probs=102.5
Q ss_pred ccCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+.+..++.++|+.++.++++++|+||++||++|+.+.|.|.++++.+.+.++++.|+.|||+.++. ++++|+|.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~--l~~~~~v~~~ 205 (241)
T 3idv_A 128 PPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD--LAKRFDVSGY 205 (241)
T ss_dssp CCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH--HHHHTTCCSS
T ss_pred ccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH--HHHHcCCccc
Confidence 34567889999999999999999999999999999999999999999998766779999999999888 9999999999
Q ss_pred cEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCc
Q 010804 109 PTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPAS 145 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 145 (500)
|++++|++| +.+ .|.|.++.+.|.+|+.+..++.+
T Consensus 206 Pt~~~~~~g-~~~-~~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 206 PTLKIFRKG-RPY-DYNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp SEEEEEETT-EEE-ECCSCCSHHHHHHHHHHHTTCTT
T ss_pred CEEEEEECC-eEE-EecCCCCHHHHHHHHHhhhCCCC
Confidence 999999976 544 49999999999999999987753
No 107
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.69 E-value=7.2e-17 Score=127.12 Aligned_cols=104 Identities=26% Similarity=0.558 Sum_probs=94.5
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+...+++|++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 678999999998877889999999999999999999999999999875 599999999999888888999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+.|....++.|..+.+++.++|++.+
T Consensus 81 ~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 KGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 76665678999999999999998865
No 108
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.69 E-value=1.7e-16 Score=127.20 Aligned_cols=102 Identities=25% Similarity=0.609 Sum_probs=90.6
Q ss_pred CceEEcCc-cChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 31 EFVLTLDH-SNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 31 ~~v~~l~~-~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
+.+..+++ ++|+..+. ++++++|+||++||++|+.+.|.+.++++.+ ++.++.||++..+. ++++|+|.+
T Consensus 13 ~~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~~--~~~~~~v~~ 85 (117)
T 2xc2_A 13 SELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLEE--TARKYNISA 85 (117)
T ss_dssp CEEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSHH--HHHHTTCCS
T ss_pred heeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccHH--HHHHcCCCc
Confidence 34788888 89999997 7899999999999999999999999998887 28999999998887 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+|++++|++| +.+.++.| .+.+.|.+++.+.+
T Consensus 86 ~Pt~~~~~~G-~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 86 MPTFIAIKNG-EKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp SSEEEEEETT-EEEEEEES-SCHHHHHHHHHHHC
T ss_pred cceEEEEeCC-cEEEEEeC-CCHHHHHHHHHHhC
Confidence 9999999765 77888999 68899999998753
No 109
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.68 E-value=2.1e-16 Score=131.11 Aligned_cols=107 Identities=27% Similarity=0.604 Sum_probs=82.3
Q ss_pred CceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccE
Q 010804 31 EFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPT 110 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~ 110 (500)
..+..+++++|...+.+++.++|+||++||++|+.+.|.+.++++.+.+. +.|+.||++.+.. ++++|+|.++|+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~~--l~~~~~v~~~Pt 107 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVNVDEHPG--LAARYGVRSVPT 107 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCHH--HHHHTTCCSSSE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCCCHH--HHHHCCCCccCE
Confidence 56788999999999866656999999999999999999999999998754 9999999998887 999999999999
Q ss_pred EEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 111 IKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
+++|++| +...++.|..+.+.+.+||.+.+..
T Consensus 108 ~~~~~~G-~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 108 LVLFRRG-APVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEEEeCC-cEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 9999754 7788999999999999999987653
No 110
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.68 E-value=2.3e-16 Score=125.23 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=87.3
Q ss_pred CCeEEEeccchhhhhhcCCC--eEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceE
Q 010804 375 EPVKVLVADSLQDMVFNSGK--NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT 452 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~--~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~ 452 (500)
+.+.+++.++|.+.+.+.++ .++|+||++||++|+.+.|.+++++..+. ++.|+++|++.. .++|+++++||
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~---~~~~~v~~~PT 76 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC---IQHYHDNCLPT 76 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT---STTCCGGGCSE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh---HHHCCCCCCCE
Confidence 45788999999998865544 89999999999999999999999999985 499999999986 46799999999
Q ss_pred EEEEcCCCceEEecCC-------CCHHHHHHHHHhh
Q 010804 453 VFFRSASGKTVPYEGD-------RTKEDIVDFIENN 481 (500)
Q Consensus 453 ~~~~~~~~~~~~~~g~-------~~~~~l~~~i~~~ 481 (500)
+++|.+|..+.++.|. .+.++|..+|.+.
T Consensus 77 ~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 77 IFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 9999877777788764 4789999999764
No 111
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.68 E-value=4.6e-17 Score=134.25 Aligned_cols=111 Identities=12% Similarity=0.150 Sum_probs=80.0
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhcCCCCCeE--EEEEecChhhhHHHHHhcCccc
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPW--CGHCKKLAPEYEKAASELSSHDPPVV--LAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~--c~~C~~~~~~~~~~~~~~~~~~~~v~--~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
.+..+++++|++.+.+++.++|+|+++| |++|+.+.|.|+++++++ +. +. |+.||++..+. ++++|+|.+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~---v~~~~~~Vd~d~~~~--la~~~~V~~ 91 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ---FDWQVAVADLEQSEA--IGDRFNVRR 91 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT---SCCEEEEECHHHHHH--HHHTTTCCS
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc---cceeEEEEECCCCHH--HHHhcCCCc
Confidence 4678999999999988888999999887 999999999999999998 53 77 99999998888 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCCccccC
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIK 149 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~ 149 (500)
+||+++|++| +.+.++.|..+.+.|.+++.+.+..+....+
T Consensus 92 iPT~~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 92 FPATLVFTDG-KLRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp SSEEEEESCC-----CEESCCCHHHHHHHHHHHHC-------
T ss_pred CCeEEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 9999999754 8888999999999999999999987666553
No 112
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.68 E-value=1.1e-16 Score=126.74 Aligned_cols=103 Identities=17% Similarity=0.287 Sum_probs=89.5
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEE
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIK 112 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~ 112 (500)
+..+++++| ..+.++++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++..+. ++++|+|.++|+++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~~--l~~~~~v~~~Pt~~ 77 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARPE--LMKELGFERVPTLV 77 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCHH--HHHHTTCCSSCEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCHH--HHHHcCCcccCEEE
Confidence 345788999 777788999999999999999999999999988764 38899999988877 99999999999999
Q ss_pred EEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 113 ILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
+|++ |+.+.++.|..+.+.|.+++....++
T Consensus 78 ~~~~-G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 78 FIRD-GKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp EEES-SSEEEEEESCCCHHHHHHHHHTC---
T ss_pred EEEC-CEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9965 58889999999999999999987654
No 113
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.68 E-value=1.1e-16 Score=135.23 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=96.7
Q ss_pred CCCeEEEeccchhhhhhc-CCCeEEEEEEC-------CCChhHhhhhHHHHHHHHHcCC---CCceEEEEEeCCCCCCCC
Q 010804 374 NEPVKVLVADSLQDMVFN-SGKNVLLEFYA-------PWCGHCKKLAPILDEVAVSYQN---DADVVIAKFDATANDIPG 442 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~-------~~c~~c~~~~~~~~~~~~~~~~---~~~~~~~~id~~~~~~~~ 442 (500)
...+.+|++++|++++.. .+.+++|+||| +||++|+.+.|.|++++..+.. ..++.|+++|++.+..++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 345889999999998854 36689999999 4999999999999999999861 137999999999999999
Q ss_pred CCCCcCcceEEEEEcCCCce------------EEe---cC-CCCHHHHHHHHHhhcCCCCC
Q 010804 443 DTFEVQGYPTVFFRSASGKT------------VPY---EG-DRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 443 ~~~~i~~~P~~~~~~~~~~~------------~~~---~g-~~~~~~l~~~i~~~~~~~~~ 487 (500)
++|+|+++|++++|++|+.. ..| .| ..+++.|.+||.+.++...+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 99999999999999888642 345 25 79999999999999886543
No 114
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.68 E-value=2.9e-16 Score=128.66 Aligned_cols=125 Identities=24% Similarity=0.401 Sum_probs=112.4
Q ss_pred ccCCcEEEeCCCCCCccchhhhhcCCCceEEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCC
Q 010804 242 SSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQ 321 (500)
Q Consensus 242 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~ 321 (500)
+++|++.+++. .++..++.++.++++.|... +..++.+...++++|.+|+++ +.|+++|.+++++++..||+.
T Consensus 3 c~~plv~~~t~-----~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~ 75 (133)
T 2djk_A 3 LGSPLIGEIGP-----ETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLK 75 (133)
T ss_dssp CSCCCSEECCH-----HHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCC
T ss_pred cccCceeccCh-----HHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCC
Confidence 56889999999 78888888889998888875 788899999999999999999 999999999999999999999
Q ss_pred CCCCceEEEEeC-CCCcc-CC--CCCChhhHHHHHHHHhcCCCCCccccCCCCCCC
Q 010804 322 ESQVPLIVIQTN-DGQKY-LK--PNLDADQIAPWVKEYKEGKVPPFRKSEPIPEEN 373 (500)
Q Consensus 322 ~~~~P~i~i~~~-~~~~y-~~--~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~ 373 (500)
..+.|++++++. ++.+| +. |.++.+.|.+|++++++|+++|++|||++|+.+
T Consensus 76 ~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~ 131 (133)
T 2djk_A 76 TDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQ 131 (133)
T ss_dssp SSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTS
T ss_pred cccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCcC
Confidence 666999999996 44567 65 899999999999999999999999999999753
No 115
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.68 E-value=8.2e-17 Score=135.63 Aligned_cols=109 Identities=23% Similarity=0.472 Sum_probs=97.6
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
.+.+..++.++|++.+ ..+++++|+||++||++|+.+.|.|++++..+.+ ++.|+.+|++.++.++++|++.++|++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 4568889999999998 7789999999999999999999999999999976 599999999999999989999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|+.|..+.++.|..+.++|.+||++.++++
T Consensus 123 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 123 ILFHKGRELARAAGARPASELVGFVRGKLGAR 154 (155)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred EEEeCCeEEEEecCCCCHHHHHHHHHHHhccC
Confidence 99976655668999999999999999988653
No 116
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.68 E-value=4.8e-17 Score=134.84 Aligned_cols=109 Identities=21% Similarity=0.343 Sum_probs=98.8
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
.+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..++++|++.++|++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 356899999999977768899999999999999999999999999999976 599999999999999989999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++|..|..+.++.|..+.++|.+||++.+.+
T Consensus 83 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 83 KFFCHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 9997666667899999999999999988753
No 117
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.68 E-value=2e-16 Score=133.23 Aligned_cols=106 Identities=22% Similarity=0.495 Sum_probs=93.3
Q ss_pred CceEEcC-ccChhhhhcc--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc
Q 010804 31 EFVLTLD-HSNFSDTVSK--HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG 107 (500)
Q Consensus 31 ~~v~~l~-~~~~~~~~~~--~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~ 107 (500)
..+..++ .++|+.++.+ +++++|+||++||++|+.+.|.|.++++.+. ++.|+.||++..+. ++++|+|.+
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~~--l~~~~~v~~ 85 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVPE--VSEKYEISS 85 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHH--HHHHTTCCS
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCHH--HHHHcCCCC
Confidence 4466776 5899999977 8999999999999999999999999999863 39999999999887 999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
+|++++|+ +|+.+.++.|. +.+.|.++|.+.++..
T Consensus 86 ~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 86 VPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHASSG 120 (153)
T ss_dssp SSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSCTT
T ss_pred CCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhccc
Confidence 99999999 55888888884 7888999999988653
No 118
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.68 E-value=2.6e-16 Score=123.17 Aligned_cols=100 Identities=29% Similarity=0.681 Sum_probs=88.5
Q ss_pred EEcCc-cChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccE
Q 010804 34 LTLDH-SNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPT 110 (500)
Q Consensus 34 ~~l~~-~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~ 110 (500)
..+++ ++|+..+. ++++++|.||++||++|+.+.|.+.++++.+. ++.++.+|++..+. ++++|+|.++|+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~--~~~~~~v~~~Pt 75 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNEE--AAAKYSVTAMPT 75 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCHH--HHHHTTCCSSSE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCHH--HHHHcCCccccE
Confidence 45666 88999987 78999999999999999999999999999875 39999999998887 999999999999
Q ss_pred EEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 111 IKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+++|++| +...++.| .+.+.+.+++.+.+
T Consensus 76 ~~~~~~g-~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 76 FVFIKDG-KEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEEEETT-EEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCC-cEEEEEeC-CCHHHHHHHHHhhC
Confidence 9999854 77888999 68999999998753
No 119
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.7e-17 Score=137.11 Aligned_cols=107 Identities=18% Similarity=0.442 Sum_probs=92.9
Q ss_pred ccCceEEcCccChhhhhccCC--eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 29 SKEFVLTLDHSNFSDTVSKHN--FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~~--~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
..+.+..+++++|+..+.+++ +++|+||++||++|+.+.|.|.++++++.+ +++.|+.||++..+. ++++|+|.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~--~~v~~~~vd~~~~~~--~~~~~~v~ 80 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC--TGLNFGKVDVGRYTD--VSTRYKVS 80 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS--SSCEEEECCTTTCHH--HHHHTTCC
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCccCHH--HHHHccCc
Confidence 356688999999999996554 899999999999999999999999999974 239999999999887 99999999
Q ss_pred ------cccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 107 ------GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 107 ------~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
++|++++|++| +.+.++.|..+.+.|.+|+.+.
T Consensus 81 ~~~~~~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 81 TSPLTKQLPTLILFQGG-KEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CCSSSSCSSEEEEESSS-SEEEEESCBCSSSCBCCCCCCH
T ss_pred ccCCcCCCCEEEEEECC-EEEEEecCcCchHHHHHHHhcc
Confidence 99999999765 7888999998888777776543
No 120
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.68 E-value=6.8e-17 Score=130.12 Aligned_cols=110 Identities=34% Similarity=0.653 Sum_probs=98.0
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCC-CceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
+.+..++.++|++.+ ..++.++|+||++||++|+.+.|.+.+++..++.. .++.++.+|++.+..+++++++.++|++
T Consensus 7 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 7 DHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp TTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 458899999999887 56889999999999999999999999999988642 4799999999999999989999999999
Q ss_pred EEEcCCCce--EEecCCCCHHHHHHHHHhhcCCC
Q 010804 454 FFRSASGKT--VPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 454 ~~~~~~~~~--~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|..|+.. .++.|..+.++|.+||+++++.+
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999777655 78999999999999999887653
No 121
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=7.3e-17 Score=130.22 Aligned_cols=110 Identities=26% Similarity=0.494 Sum_probs=97.2
Q ss_pred CCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceE
Q 010804 373 NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT 452 (500)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~ 452 (500)
....+..++.++|...+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.|+.+|++.+..+++++++.++|+
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt 87 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPT 87 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 3456889999999988877889999999999999999999999999999875 69999999999988888899999999
Q ss_pred EEEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 453 VFFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+++|+.|..+.++.|..+.+.+.++|++.+.+
T Consensus 88 ~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 88 LILFKDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 99997655566899999999999999877643
No 122
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.68 E-value=8.5e-17 Score=129.88 Aligned_cols=106 Identities=29% Similarity=0.591 Sum_probs=90.2
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCCh--------------hHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCC
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCG--------------HCKKLAPILDEVAVSYQNDADVVIAKFDATANDIP 441 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~--------------~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~ 441 (500)
.+..++.++|++.+.+.+++++|+||++||+ +|+.+.|.+.+++..+++ ++.++.+|++.+..+
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGT 81 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTTT
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHH
Confidence 4788999999988778899999999999999 999999999999988865 599999999999999
Q ss_pred CCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 442 GDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 442 ~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+++|++.++|++++|++|..+.++.|..+.+++.+||+++++
T Consensus 82 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 82 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp GGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred HHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 999999999999999655556689999999999999987653
No 123
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.68 E-value=1.1e-16 Score=125.55 Aligned_cols=103 Identities=24% Similarity=0.488 Sum_probs=91.5
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
+..++.++|+..+ +.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+...+++|++.++|++++|
T Consensus 2 v~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHH-SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 6789999999555 7789999999999999999999999999999875 599999999999888888999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+.|....++.|..+.+++.++|++.+
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 65555668899999999999998765
No 124
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.67 E-value=6.1e-17 Score=129.48 Aligned_cols=104 Identities=23% Similarity=0.394 Sum_probs=92.3
Q ss_pred CCeEEEeccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 375 EPVKVLVADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
......+.++|++.+.+ .++.++|+||++||++|+.+.|.|.+++..+++ +.|+.+|++.+..++++|++.++|++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCccccEE
Confidence 44666789999998853 789999999999999999999999999988864 99999999999999999999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
++|..|+.+.++.|. +.+.|.++|++++
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999766667788898 9999999998763
No 125
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.67 E-value=4.2e-16 Score=139.92 Aligned_cols=113 Identities=28% Similarity=0.564 Sum_probs=102.4
Q ss_pred CCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 372 ENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 372 ~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
.....+..++.++|+..+.+.+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..++++|++.++|
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~P 86 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIP 86 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSBS
T ss_pred CCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcCC
Confidence 34566899999999998778899999999999999999999999999999976 5999999999999999999999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
++++|+.|+.+.++.|..+.++|.+||++.+....
T Consensus 87 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 87 TLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred EEEEEECCeEEEEeccccChHHHHHHHHhhccccc
Confidence 99999866667789999999999999999987654
No 126
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.67 E-value=3.6e-16 Score=126.49 Aligned_cols=106 Identities=27% Similarity=0.575 Sum_probs=91.9
Q ss_pred cccCceEEc-CccChhhhhc----cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHh
Q 010804 28 ESKEFVLTL-DHSNFSDTVS----KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQ 102 (500)
Q Consensus 28 ~~~~~v~~l-~~~~~~~~~~----~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~ 102 (500)
.+...+..+ +.++|+..+. ++++++|+||++||++|+.+.|.+.++++++. ++.|+.||++.... ++++
T Consensus 13 ~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~~--l~~~ 86 (124)
T 1xfl_A 13 SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELKS--VASD 86 (124)
T ss_dssp CCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSHH--HHHH
T ss_pred cCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCHH--HHHH
Confidence 345557777 6688998885 48999999999999999999999999999975 39999999998877 9999
Q ss_pred cCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 103 YEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 103 ~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
|+|.++|++++|++| +.+.++.| .+.+.|.++|.+.+
T Consensus 87 ~~v~~~Pt~~~~~~G-~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 87 WAIQAMPTFMFLKEG-KILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp TTCCSSSEEEEEETT-EEEEEEES-CCHHHHHHHHHHHC
T ss_pred cCCCccCEEEEEECC-EEEEEEeC-CCHHHHHHHHHHhc
Confidence 999999999999754 78888999 58999999998765
No 127
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.67 E-value=2.7e-17 Score=133.02 Aligned_cols=109 Identities=21% Similarity=0.407 Sum_probs=97.2
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+..++++|++.++|+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 45888999999877767889999999999999999999999999999876 6999999999998888889999999999
Q ss_pred EEcCCCceEEecCC----CCHHHHHHHHHhhcCCC
Q 010804 455 FRSASGKTVPYEGD----RTKEDIVDFIENNRDKA 485 (500)
Q Consensus 455 ~~~~~~~~~~~~g~----~~~~~l~~~i~~~~~~~ 485 (500)
+|+.|+.+.++.|. .+.++|.+||++.+++.
T Consensus 81 ~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 81 LYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp EEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred EEeCCCccceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 99877776677765 89999999999987654
No 128
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.67 E-value=1.1e-16 Score=134.17 Aligned_cols=109 Identities=21% Similarity=0.484 Sum_probs=99.6
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
...+..++.++|+..+ ..+++++|+||++||++|+.+.|.|.+++..++. ++.|+.+|++.+..+.++|++.++|++
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 4568899999999998 7889999999999999999999999999999875 599999999999999999999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|+.|..+.++.|..+.++|.+||++++++.
T Consensus 114 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHHSC
T ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 99976666778999999999999999988754
No 129
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.67 E-value=1e-16 Score=128.70 Aligned_cols=105 Identities=13% Similarity=0.195 Sum_probs=87.1
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh--hhhHHHHHhcCccc
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE--EANKELASQYEIRG 107 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~~~i~~ 107 (500)
...+..++.++|...+.++++++|+||++||++|+.+.|.+.++++.+... +.++.++... +...+++++|+|.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~i~~ 87 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH---IYFINSEEPSQLNDLQAFRSRYGIPT 87 (118)
T ss_dssp TTTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC---CEEEETTCGGGHHHHHHHHHHHTCCS
T ss_pred HhhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe---EEEEECCCcCcHHHHHHHHHHcCCCC
Confidence 345678899999999999999999999999999999999999999987533 6665443322 22234999999999
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHHH
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYLK 138 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 138 (500)
+|++++|++| +...++.|..+.+.|.+|+.
T Consensus 88 ~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 88 VPGFVHITDG-QINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SCEEEEEETT-EEEEECCTTCCHHHHHHHHT
T ss_pred CCeEEEEECC-EEEEEecCCCCHHHHHHHhh
Confidence 9999999865 77789999999999999985
No 130
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.67 E-value=1.3e-16 Score=125.10 Aligned_cols=104 Identities=28% Similarity=0.568 Sum_probs=93.5
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
+..++.++|...+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+...++++++.++|+++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 567899999998877789999999999999999999999999999876 599999999999888888999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+.|....++.|..+.+.+.++|++.+
T Consensus 80 ~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 76655668899999999999998753
No 131
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.67 E-value=2.5e-16 Score=125.41 Aligned_cols=100 Identities=25% Similarity=0.572 Sum_probs=87.7
Q ss_pred ceEEcC-ccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccE
Q 010804 32 FVLTLD-HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPT 110 (500)
Q Consensus 32 ~v~~l~-~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~ 110 (500)
.+..++ .++|+.+++++++++|+||++||++|+.+.|.+.++++++.+ +.|+.||++.++. ++++|+|.++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~~~--l~~~~~v~~~Pt 86 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDESPD--IAKECEVTAMPT 86 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTCHH--HHHHTTCCSBSE
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHH--HHHHCCCCcccE
Confidence 344444 467888899999999999999999999999999999998753 8999999998887 999999999999
Q ss_pred EEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 111 IKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
+++|++| +.+.++.|.. .+.|.+++.+
T Consensus 87 ~~~~~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 87 FVLGKDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred EEEEeCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 9999755 7888899988 9999999875
No 132
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.67 E-value=4.9e-16 Score=139.56 Aligned_cols=111 Identities=16% Similarity=0.335 Sum_probs=94.2
Q ss_pred cccccCceEEcCccChhhhhccCCeEEEEEE--CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-----hhhHH
Q 010804 26 SAESKEFVLTLDHSNFSDTVSKHNFIVVEFY--APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE-----EANKE 98 (500)
Q Consensus 26 ~~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~--~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-----~~~~~ 98 (500)
++...+.+..|++.+|+.++++++++||.|| +|||+ +.|.|+++++.+.+..+++.|+.|||+. ++.
T Consensus 11 ~~~~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~-- 84 (248)
T 2c0g_A 11 GSVTCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKA-- 84 (248)
T ss_dssp ----CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHH--
T ss_pred CCCCCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHH--
Confidence 3445677889999999999999999999999 99999 9999999999996412349999999998 555
Q ss_pred HHHhcCcc--cccEEEEEecCC-ceeeec--CCCCCHHHHHHHHHhhcCC
Q 010804 99 LASQYEIR--GFPTIKILRNGG-KTIQEY--KGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 99 ~~~~~~i~--~~P~~~~~~~~~-~~~~~~--~g~~~~~~l~~~i~~~~~~ 143 (500)
+|++|+|+ ++||+++|. |. ..+..| .|.++.+.|.+||.+.++.
T Consensus 85 la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~ 133 (248)
T 2c0g_A 85 LGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPL 133 (248)
T ss_dssp HHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSC
T ss_pred HHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhcc
Confidence 99999999 999999999 63 236788 9999999999999998763
No 133
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.67 E-value=1.5e-16 Score=125.70 Aligned_cols=106 Identities=25% Similarity=0.470 Sum_probs=93.4
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEE
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFF 455 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~ 455 (500)
.+..++.++|+..+ +.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.++..+++|++.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 37789999999665 6788999999999999999999999999999875 59999999999988888899999999999
Q ss_pred EcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 456 RSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
|+.|....++.|..+.+++.+||++.++.
T Consensus 79 ~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 96555466889999999999999988754
No 134
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.66 E-value=2.9e-16 Score=131.22 Aligned_cols=100 Identities=16% Similarity=0.298 Sum_probs=89.5
Q ss_pred cCccChhhhh--ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEE
Q 010804 36 LDHSNFSDTV--SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKI 113 (500)
Q Consensus 36 l~~~~~~~~~--~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~ 113 (500)
.+.++|+..+ .++++++|+||++||++|+.+.|.+.++++++.+. +.++.||++..+. ++++|+|.++|++++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~---~~~~~vd~d~~~~--l~~~~~v~~~Pt~~~ 83 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM---AAIYLVDVDQTAV--YTQYFDISYIPSTVF 83 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT---EEEEEEETTTCCH--HHHHTTCCSSSEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCcCHH--HHHHcCCCccCeEEE
Confidence 4667899988 56899999999999999999999999999988654 9999999999888 999999999999998
Q ss_pred EecCCcee---------eecCC-CCCHHHHHHHHHhhc
Q 010804 114 LRNGGKTI---------QEYKG-PREADGIVEYLKKQS 141 (500)
Q Consensus 114 ~~~~~~~~---------~~~~g-~~~~~~l~~~i~~~~ 141 (500)
+++| +.+ .++.| ..+.+.|.+++....
T Consensus 84 ~~~G-~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 84 FFNG-QHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EETT-EEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred EECC-eEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 8875 777 78899 899999999998764
No 135
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.66 E-value=3.7e-16 Score=123.91 Aligned_cols=106 Identities=23% Similarity=0.407 Sum_probs=91.8
Q ss_pred CCCCeEEEeccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-CCCCCCCCCCcCcc
Q 010804 373 NNEPVKVLVADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-ANDIPGDTFEVQGY 450 (500)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-~~~~~~~~~~i~~~ 450 (500)
..+.+..++.++|++.+.+ .+++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++ .+..++++|++.++
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~~~~~~~~v~~~ 79 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVV 79 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSBS
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcchHHHHHHcCCCee
Confidence 3456899999999999954 58899999999999999999999999999886 4999999998 66777888999999
Q ss_pred eEEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 451 PTVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 451 P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
|++++++.|..+.++.|. +.++|.++|++..
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 PTFKILKENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp SEEEEESSSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 999999766656678886 5999999998764
No 136
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.65 E-value=2.4e-16 Score=129.71 Aligned_cols=105 Identities=16% Similarity=0.271 Sum_probs=92.1
Q ss_pred cCceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEec---------ChhhhHHHH
Q 010804 30 KEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA---------NEEANKELA 100 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~---------~~~~~~~~~ 100 (500)
...+..++.++|+..+.+ +++|+||++||++|+.+.|.+.++++++. +.|+.||+ +..+. ++
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~~~~d~~~~--l~ 85 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGERELSAARL--EM 85 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCHHHHHHHHH--HH
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhhhhhhhhHH--HH
Confidence 456888999999999976 99999999999999999999999988763 78999999 55555 99
Q ss_pred HhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 101 SQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 101 ~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
++|+|.++||+++|++ |+.+.++.|..+.+.+.+++.+.+.++
T Consensus 86 ~~~~v~~~Pt~~~~~~-G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 86 NKAGVEGTPTLVFYKE-GRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HHHTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred HHcCCceeCeEEEEcC-CEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999995 588899999999999999999988653
No 137
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.65 E-value=2.4e-16 Score=123.36 Aligned_cols=103 Identities=27% Similarity=0.439 Sum_probs=92.4
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
|..++.++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+++ +.++.+|++.+...++++++.++|++++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 4578999999998 6788999999999999999999999999998864 99999999999888888999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+.|....++.|..+.+++.+||++.++
T Consensus 77 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 655556689999999999999998765
No 138
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.65 E-value=3.4e-16 Score=126.14 Aligned_cols=105 Identities=27% Similarity=0.585 Sum_probs=91.8
Q ss_pred CceEEcCc-cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLDH-SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~~-~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
..+..+++ ++|++++.++++++|+||++||++|+.+.|.+.++++.+.+. .+.++.||++..+. ++++|+|.++|
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~~~~--~~~~~~v~~~P 90 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDEQSQ--IAQEVGIRAMP 90 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTTCHH--HHHHHTCCSSS
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcCCHH--HHHHcCCCccc
Confidence 34555555 889999999999999999999999999999999998887642 28999999998887 99999999999
Q ss_pred EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 110 TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++++|++| +.+.++.|. +.+.|.++|.+.+
T Consensus 91 t~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 91 TFVFFKNG-QKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEEETT-EEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEEECC-eEEeeEcCC-CHHHHHHHHHHhh
Confidence 99999854 788889998 9999999998765
No 139
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=2.8e-16 Score=127.72 Aligned_cols=109 Identities=29% Similarity=0.591 Sum_probs=94.4
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
.+.+..++.++|++.+ + +.++|+||++||++|+.+.|.|.+++..+.+ .++.|+.+|++.+..++++|++.++|++
T Consensus 6 ~~~v~~l~~~~f~~~~-~--~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELL-E--GDWMIEFYAPWCPACQNLQPEWESFAEWGED-LEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHT-S--SEEEEEEECSSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHh-C--CCEEEEEECCCCHHHHHHhHHHHHHHHHhcc-CCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 3568899999999876 2 3499999999999999999999999998863 2699999999999888888999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
++|+ ++++.++.|..+.++|.+||++.+.+..+
T Consensus 82 ~~~~-~G~~~~~~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 82 YHCK-DGEFRRYQGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp EEEE-TTEEEECCSCCCHHHHHHHHHTCGGGGSC
T ss_pred EEEe-CCeEEEeecCCCHHHHHHHHHHHhhccCC
Confidence 9995 45578899999999999999998765433
No 140
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.64 E-value=3.5e-16 Score=123.48 Aligned_cols=102 Identities=24% Similarity=0.442 Sum_probs=89.7
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEE
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFF 455 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~ 455 (500)
.....+.++|+..+ ..++.++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+..+++++++.++|++++
T Consensus 8 ~~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 8 VTQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CEECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 35566788999888 668999999999999999999999999999986 49999999999998998999999999999
Q ss_pred EcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 456 RSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
|..|+.+.++.|. +.++|.++|++++
T Consensus 84 ~~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 84 FKNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 9866556688887 7799999998763
No 141
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.64 E-value=6.2e-16 Score=121.71 Aligned_cols=103 Identities=18% Similarity=0.320 Sum_probs=88.2
Q ss_pred eEEE-eccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 377 VKVL-VADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 377 ~~~l-~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+..+ +.++|++.+.+ .+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+...+++|++.++|+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 4555 56889988864 68999999999999999999999999999984 5999999999998888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+|..|..+.++.|. +.++|.+||+++++
T Consensus 80 ~~~~G~~~~~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 80 FFRNKVRIDQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHHC
T ss_pred EEECCeEEEEEeCC-CHHHHHHHHHHhcC
Confidence 99766556688884 55669999988753
No 142
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.64 E-value=4.3e-16 Score=129.18 Aligned_cols=107 Identities=19% Similarity=0.377 Sum_probs=81.8
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+.+..++.++|...+.+.++ ++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+..++++|++.++|+++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 55788999999999866666 99999999999999999999999999875 5999999999998888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+|..|..+.++.|..+.++|.+||++.++.
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 997655566899999999999999988754
No 143
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.63 E-value=8.2e-17 Score=142.89 Aligned_cols=130 Identities=15% Similarity=0.235 Sum_probs=109.2
Q ss_pred hHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEE-eccchhhhhhcC--CCeEEEEEECCCChhHhhhhHHHHHHHHHcC
Q 010804 347 QIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVL-VADSLQDMVFNS--GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQ 423 (500)
Q Consensus 347 ~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l-~~~~~~~~~~~~--~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~ 423 (500)
....|+.++.+++++...++.. +....+.+..+ +.++|.+.+.+. +++++|+||++||++|+.+.|.|.+++..+.
T Consensus 72 ~d~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~ 150 (217)
T 2trc_P 72 EDEGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP 150 (217)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC
Confidence 4567999999999977765543 33456778888 899999999654 3899999999999999999999999999885
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCC-------HHHHHHHHHhh
Q 010804 424 NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRT-------KEDIVDFIENN 481 (500)
Q Consensus 424 ~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~-------~~~l~~~i~~~ 481 (500)
++.|++||++ +..++.+|++.++||+++|..|..+.++.|..+ .++|.+||.++
T Consensus 151 ---~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 151 ---MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp ---TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred ---CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 5999999999 777888899999999999986665668888665 49999999875
No 144
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.63 E-value=5.6e-16 Score=125.37 Aligned_cols=103 Identities=18% Similarity=0.284 Sum_probs=92.4
Q ss_pred eEEEec-cchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEE
Q 010804 377 VKVLVA-DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFF 455 (500)
Q Consensus 377 ~~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~ 455 (500)
+..++. ++|++.+ ..+++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+..++++|++.++|++++
T Consensus 21 v~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 788998 9999988 788999999999999999999999999999884 59999999999988888899999999999
Q ss_pred EcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 456 RSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
|..|..+.++.| .+.++|.++|++.+.+
T Consensus 97 ~~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 97 ARSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 976655667888 7899999999987643
No 145
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=7.5e-16 Score=125.96 Aligned_cols=107 Identities=21% Similarity=0.510 Sum_probs=91.4
Q ss_pred EEcCccChhhhh----ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 34 LTLDHSNFSDTV----SKHNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 34 ~~l~~~~~~~~~----~~~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
..+++.+|...+ .++++++|+||++||++|+.+.|.+ ..+++.+... +.++.||++.+....++++|+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~~~v~ 85 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGEGVELRKKYGVH 85 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTTHHHHHHHTTCC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcchHHHHHHcCCC
Confidence 446778888877 4789999999999999999999999 7777766544 88999999854444499999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
++|++++|+.+|+.+.++.|..+.+.|.++|.+.+.+
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp SSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 9999999976678888999999999999999998865
No 146
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.63 E-value=8e-16 Score=120.83 Aligned_cols=103 Identities=28% Similarity=0.537 Sum_probs=90.2
Q ss_pred eEEEec-cchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 377 VKVLVA-DSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 377 ~~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
+..++. ++|.+.+.+ .+++++|+||++||++|+.+.|.+.+++..++. ++.++.+|++.+...++++++.++|+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 456777 889888854 789999999999999999999999999999864 6999999999998888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+|+.|..+.++.| .+.+++.++|++++
T Consensus 80 ~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 9976665668888 78999999998753
No 147
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.63 E-value=1.8e-15 Score=121.40 Aligned_cols=105 Identities=23% Similarity=0.571 Sum_probs=90.9
Q ss_pred CceEEc-CccChhhhhcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCc
Q 010804 31 EFVLTL-DHSNFSDTVSK----HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEI 105 (500)
Q Consensus 31 ~~v~~l-~~~~~~~~~~~----~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i 105 (500)
..+..+ +.++|+..+.. +++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++..+. ++++|+|
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~--~~~~~~v 79 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELKD--VAEAYNV 79 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHH--HHHHTTC
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCHH--HHHHcCC
Confidence 345666 56889988864 8999999999999999999999999999875 38999999998877 9999999
Q ss_pred ccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 106 RGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 106 ~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
.++|++++|++| +...++.| .+.+.+.++|.+.+..
T Consensus 80 ~~~Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 80 EAMPTFLFIKDG-EKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp CSBSEEEEEETT-EEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CcCcEEEEEeCC-eEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999754 77788889 5899999999987754
No 148
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=4.6e-15 Score=121.78 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=89.6
Q ss_pred CCCeEEEeccchhhhhhcC--CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 374 NEPVKVLVADSLQDMVFNS--GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~--~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
.+.+..++.++|.+.+.+. ++.++|+||++||++|+.+.|.|.+++..+. ++.|+++|++.+. ++|++.++|
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~---~~~~i~~~P 82 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI---EHYHDNCLP 82 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC---SSCCSSCCS
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc---ccCCCCCCC
Confidence 4568889999999988543 3689999999999999999999999999875 5999999998864 669999999
Q ss_pred EEEEEcCCCceEEecCCC-------CHHHHHHHHHhhcC
Q 010804 452 TVFFRSASGKTVPYEGDR-------TKEDIVDFIENNRD 483 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~-------~~~~l~~~i~~~~~ 483 (500)
++++|..|..+.++.|.. +.++|.++|.++..
T Consensus 83 t~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~~ 121 (135)
T 2dbc_A 83 TIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVGA 121 (135)
T ss_dssp EEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHTS
T ss_pred EEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcCC
Confidence 999998776677888864 89999999998743
No 149
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.63 E-value=1.4e-15 Score=120.89 Aligned_cols=102 Identities=28% Similarity=0.603 Sum_probs=89.2
Q ss_pred ceEEc-CccChhhhhcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 32 FVLTL-DHSNFSDTVSK----HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 32 ~v~~l-~~~~~~~~~~~----~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
.+..+ +.++|++.+.. +++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++..+. ++++|+|.
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~--~~~~~~v~ 78 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELKA--VAEEWNVE 78 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCHH--HHHHHHCS
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccHH--HHHhCCCC
Confidence 45566 66889988864 8999999999999999999999999999875 39999999998887 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++|++++|++| +...++.| .+.+.+.+++.+.+
T Consensus 79 ~~Pt~~~~~~G-~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 79 AMPTFIFLKDG-KLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp STTEEEEEETT-EEEEEEEC-CCTTHHHHHHHHHH
T ss_pred cccEEEEEeCC-EEEEEEec-CCHHHHHHHHHHhh
Confidence 99999999754 77788889 68899999998765
No 150
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.62 E-value=5.7e-16 Score=123.02 Aligned_cols=105 Identities=20% Similarity=0.426 Sum_probs=92.4
Q ss_pred CCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceE
Q 010804 373 NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT 452 (500)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~ 452 (500)
.++....++.++|++.+ +.++.++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+..++++|++.++|+
T Consensus 7 ~~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp --CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred ceeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 34557889999999988 578999999999999999999999999999876 49999999999988888899999999
Q ss_pred EEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 453 VFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+++|..|..+.++.|. +.++|.++|++.+
T Consensus 83 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 83 FKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9999766556688898 9999999998765
No 151
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.62 E-value=2.1e-15 Score=119.66 Aligned_cols=98 Identities=14% Similarity=0.265 Sum_probs=82.3
Q ss_pred ceEEcCccChhhhhcc-CC--eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 32 FVLTLDHSNFSDTVSK-HN--FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~-~~--~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
.+.++++++|...+.+ ++ +++|+||++||++|+.+.|.++++++++. ++.|++||++.. +++|+|+++
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~~-----~~~~~v~~~ 74 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNSC-----IQHYHDNCL 74 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGGT-----STTCCGGGC
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHHh-----HHHCCCCCC
Confidence 3677899999987744 33 89999999999999999999999999974 389999998763 589999999
Q ss_pred cEEEEEecCCceeeecCCCC-------CHHHHHHHHHh
Q 010804 109 PTIKILRNGGKTIQEYKGPR-------EADGIVEYLKK 139 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~~-------~~~~l~~~i~~ 139 (500)
||+++|++| +.+.++.|.. +.+.|..++.+
T Consensus 75 PT~~~fk~G-~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 75 PTIFVYKNG-QIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp SEEEEEETT-EEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CEEEEEECC-EEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999976 8888888754 56777777765
No 152
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.62 E-value=6e-16 Score=122.93 Aligned_cols=105 Identities=20% Similarity=0.438 Sum_probs=91.6
Q ss_pred CeEEE-eccchhhhhhc-C--CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 376 PVKVL-VADSLQDMVFN-S--GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 376 ~~~~l-~~~~~~~~~~~-~--~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
.+..+ +.++|++.+.. . +++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+..++++|++.++|
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMP 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCccc
Confidence 46777 56889998853 3 78999999999999999999999999999875 6999999999998888889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
++++++.|....++.|. +.++|.++|+++++
T Consensus 81 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 99999765556688898 99999999998764
No 153
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.62 E-value=2.2e-15 Score=124.72 Aligned_cols=106 Identities=18% Similarity=0.450 Sum_probs=91.5
Q ss_pred cCceEEc-CccChhhhh----ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcC
Q 010804 30 KEFVLTL-DHSNFSDTV----SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYE 104 (500)
Q Consensus 30 ~~~v~~l-~~~~~~~~~----~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~ 104 (500)
...+..+ +.++|...+ .++++++|+||++||++|+.+.|.+.++++.+. ++.|+.||++.... ++++|+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~~--~~~~~~ 96 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELSD--FSASWE 96 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHH--HHHHTT
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccHH--HHHHcC
Confidence 3445555 578999887 368999999999999999999999999999874 28999999998887 999999
Q ss_pred cccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 105 IRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 105 i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
|.++|++++|++ |+...++.|. +.+.|.+++.+.+..
T Consensus 97 v~~~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 97 IKATPTFFFLRD-GQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp CCEESEEEEEET-TEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred CCcccEEEEEcC-CeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 999999999965 5888889998 899999999987754
No 154
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.62 E-value=1.9e-15 Score=125.11 Aligned_cols=102 Identities=21% Similarity=0.237 Sum_probs=86.7
Q ss_pred eccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCC
Q 010804 381 VADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSAS 459 (500)
Q Consensus 381 ~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~ 459 (500)
+.++|+..+.+ .+++++|+||++||++|+.+.|.+.+++..+++ ++.|+.+|++.+..++++|++.++|++++|.+|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 56788877755 689999999999999999999999999999865 599999999999999999999999999999766
Q ss_pred CceE---------EecCCCC-HHHHHHHHHhhcCC
Q 010804 460 GKTV---------PYEGDRT-KEDIVDFIENNRDK 484 (500)
Q Consensus 460 ~~~~---------~~~g~~~-~~~l~~~i~~~~~~ 484 (500)
+.+. ++.|..+ .+++.++|++...+
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 5543 3445554 89999999987654
No 155
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.1e-15 Score=143.04 Aligned_cols=112 Identities=29% Similarity=0.555 Sum_probs=98.7
Q ss_pred CCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC--CCCCCCCCCCcCc
Q 010804 372 ENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT--ANDIPGDTFEVQG 449 (500)
Q Consensus 372 ~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~--~~~~~~~~~~i~~ 449 (500)
..++.+.+|+.++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+++ .+.++.+|++ .+..++++|+|.+
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~~~l~~~~~I~~ 91 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKNKALCAKYDVNG 91 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTTHHHHHHTTCCB
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccCHHHHHhCCCCc
Confidence 35567999999999999977788999999999999999999999999999976 4888888887 5677788899999
Q ss_pred ceEEEEEcCCC-----------------ceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 450 YPTVFFRSASG-----------------KTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 450 ~P~~~~~~~~~-----------------~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+|++++|..|+ .+..|.|.++.+.|.+|+.+.+...
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~ 144 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSY 144 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCC
T ss_pred cceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccc
Confidence 99999998776 2678999999999999999988653
No 156
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.62 E-value=1.4e-15 Score=121.95 Aligned_cols=105 Identities=22% Similarity=0.474 Sum_probs=87.6
Q ss_pred ceEEc--CccChhh-hhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 32 FVLTL--DHSNFSD-TVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 32 ~v~~l--~~~~~~~-~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
.+..+ +..+|.+ +.+++++++|+||++||++|+.+.|.+.++++.+ .. +.|+.||++.... ++++|+|.++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~---v~~~~vd~~~~~~--~~~~~~i~~~ 77 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KD---VTFIKVDVDKNGN--AADAYGVSSI 77 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TT---SEEEEEETTTCHH--HHHHTTCCSS
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CC---eEEEEEECCCCHH--HHHhcCCCCC
Confidence 35556 5678884 4467899999999999999999999999999998 33 9999999998887 9999999999
Q ss_pred cEEEEEec---CCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 109 PTIKILRN---GGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 109 P~~~~~~~---~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
|++++|++ +|+.+.++.|..+ ++|.+.+.+...+
T Consensus 78 Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 78 PALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp SEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred CEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 99999987 2477788999765 4599999887754
No 157
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.62 E-value=9.1e-16 Score=123.94 Aligned_cols=106 Identities=24% Similarity=0.433 Sum_probs=93.7
Q ss_pred CCeEEEeccchhhhhhc---CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 375 EPVKVLVADSLQDMVFN---SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
..+..++.++|+..+.. .+++++|+||++||++|+.+.|.|.+++..+.+ +.|+.+|++.+..++++|++.++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~P 89 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAMP 89 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCccc
Confidence 44677799999999865 689999999999999999999999999998864 999999999998888889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++++|+.|..+.++.|.. .++|.+||++++++
T Consensus 90 t~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 90 TFLFMKEGDVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp EEEEEETTEEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred EEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 999997655566888988 99999999988754
No 158
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.62 E-value=3.4e-16 Score=152.35 Aligned_cols=111 Identities=21% Similarity=0.307 Sum_probs=96.2
Q ss_pred ccCceEEcCccChhhhhccC--CeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCC-----CeEEEEEecChhhhHHHHH
Q 010804 29 SKEFVLTLDHSNFSDTVSKH--NFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP-----PVVLAKVDANEEANKELAS 101 (500)
Q Consensus 29 ~~~~v~~l~~~~~~~~~~~~--~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~-----~v~~~~vd~~~~~~~~~~~ 101 (500)
..+.|..+++++|+.++.++ +++||+||++||++|+.+.|.|.++++.+....+ ++.|+.|||+.++. +|+
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~--la~ 98 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVD--LCR 98 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHH--HHH
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHH--HHH
Confidence 45679999999999998644 7899999999999999999999999999974322 59999999999887 999
Q ss_pred hcCcccccEEEEEecCC-ceeeecCCCCCHHHHHHHHHhhcC
Q 010804 102 QYEIRGFPTIKILRNGG-KTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 102 ~~~i~~~P~~~~~~~~~-~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+|+|.++||+++|++|+ ....+|.|.++.+.| +|+.+.+.
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~ 139 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLE 139 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcC
Confidence 99999999999998654 456789999998888 88887764
No 159
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.62 E-value=3.9e-15 Score=133.35 Aligned_cols=104 Identities=24% Similarity=0.485 Sum_probs=92.4
Q ss_pred CceEEcCccChhhhhccCCeEEEEEEC--CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC-----hhhhHHHHHhc
Q 010804 31 EFVLTLDHSNFSDTVSKHNFIVVEFYA--PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN-----EEANKELASQY 103 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~~~~lv~f~~--~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~-----~~~~~~~~~~~ 103 (500)
+.|..|++.+|+.++.+++++||.||+ |||+ +.|.|+++++.+.+ .+++.|+.|||+ .++. +|++|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~-~~~v~~akVDvd~~g~~~~~~--l~~~~ 77 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSAS-SDDLLVAEVGISDYGDKLNME--LSEKY 77 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTT-CTTEEEEEECCCCSSSCCSHH--HHHHT
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcC-CCCeEEEEEeCCcccchhhHH--HHHHc
Confidence 457889999999999999999999999 9999 89999999999975 356999999954 4666 99999
Q ss_pred Ccc--cccEEEEEecCC-ceeeecCCCCCHHHHHHHHHhhc
Q 010804 104 EIR--GFPTIKILRNGG-KTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 104 ~i~--~~P~~~~~~~~~-~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+|+ ++||+++|++|. ..+.+|.|.++.+.|.+||.+..
T Consensus 78 ~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 78 KLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp TCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999 999999999874 25679999999999999999884
No 160
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.61 E-value=3.6e-14 Score=128.77 Aligned_cols=201 Identities=13% Similarity=0.125 Sum_probs=151.2
Q ss_pred cChhhhhcc-CCeEEEEEECCC--ChhhhhhhHHHHHHHHHhcCCCCC--eEEEEEecChhhhHHHHHhcCcccccEEEE
Q 010804 39 SNFSDTVSK-HNFIVVEFYAPW--CGHCKKLAPEYEKAASELSSHDPP--VVLAKVDANEEANKELASQYEIRGFPTIKI 113 (500)
Q Consensus 39 ~~~~~~~~~-~~~~lv~f~~~~--c~~C~~~~~~~~~~~~~~~~~~~~--v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~ 113 (500)
++|+.++.. .++++|.||++| |++|+.+.+.+.++++......++ +.|+.+|++.++. +|++|||+++|++.+
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~--~~~~~gv~~~Pt~~i 92 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSD--KFSEFKVERVPTVAF 92 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHH--HHHHTTCCSSSEEEE
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHH--HHHhcCCCcCCEEEE
Confidence 356666643 368899999999 999999999999999874211122 8999999998877 999999999999999
Q ss_pred EecCCceeeecCCCCCHHHHHHHHHhhcCC--CccccCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCCc
Q 010804 114 LRNGGKTIQEYKGPREADGIVEYLKKQSGP--ASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDY 191 (500)
Q Consensus 114 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~--~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~~ 191 (500)
| + | ..+|.|....+.+..|+...+.. ....+ +.+
T Consensus 93 ~-~-g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~--------------------------------------- 128 (243)
T 2hls_A 93 L-G-G--EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDA--------------------------------------- 128 (243)
T ss_dssp T-T-T--TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHH---------------------------------------
T ss_pred E-C-C--ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHH---------------------------------------
Confidence 9 3 3 56899988888888888765410 00000 000
Q ss_pred eEEEeecccccCCCCCCCCCCeEEEeccCCCcccccCCCCHHHHHHHHHHccCCcEEEeCCCCCCccchhhhhc-CCCce
Q 010804 192 EFGHTQNAKLLPRGESSVTGPVVRLFKPFDELFVDFKDFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFN-SPNAK 270 (500)
Q Consensus 192 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~ 270 (500)
+...+-. .+...
T Consensus 129 -------------------------------------------------------------------~~~~~~~~~~~~~ 141 (243)
T 2hls_A 129 -------------------------------------------------------------------TKEALKSLKGRVH 141 (243)
T ss_dssp -------------------------------------------------------------------HHHHHHHCCSCEE
T ss_pred -------------------------------------------------------------------HHHHHHHcCCCcE
Confidence 0011111 12234
Q ss_pred EEEEEeCCCCCchHHHHHHHHHHHhhc----CceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCCCccCCCCCChh
Q 010804 271 AMLFMNFSSEGTEPIQSKYREVAEQYK----GQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDGQKYLKPNLDAD 346 (500)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~l~~va~~~~----~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~~y~~~~~~~~ 346 (500)
++.|....|..|......+.+++.++. ++ +.+..+|+..++++++.+|+. .+|++++ +++..+.|..+.+
T Consensus 142 vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~-v~~~~vd~~~~~~~~~~~~V~--~vPt~~i---~G~~~~~G~~~~~ 215 (243)
T 2hls_A 142 IETIITPSCPYCPYAVLLAHMFAYEAWKQGNPV-ILSEAVEAYENPDIADKYGVM--SVPSIAI---NGYLVFVGVPYEE 215 (243)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCC-EEEEEEETTTCHHHHHHTTCC--SSSEEEE---TTEEEEESCCCHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHcccccCCc-EEEEEEECccCHHHHHHcCCe--eeCeEEE---CCEEEEeCCCCHH
Confidence 556777799999999999999999993 34 999999999999999999998 9999988 4432266888999
Q ss_pred hHHHHHHHHhcC
Q 010804 347 QIAPWVKEYKEG 358 (500)
Q Consensus 347 ~i~~fi~~~~~G 358 (500)
.+.+|+...+..
T Consensus 216 ~l~~~l~~~~~~ 227 (243)
T 2hls_A 216 DFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhhc
Confidence 999999998764
No 161
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.61 E-value=6.1e-16 Score=126.06 Aligned_cols=97 Identities=19% Similarity=0.385 Sum_probs=85.0
Q ss_pred cchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCce
Q 010804 383 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKT 462 (500)
Q Consensus 383 ~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~ 462 (500)
.++.+.....++.++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+..++++|++.++|++++|+.|+.+
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 333344446789999999999999999999999999999875 799999999999999999999999999999766667
Q ss_pred EEecCCCCHHHHHHHHHhh
Q 010804 463 VPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 463 ~~~~g~~~~~~l~~~i~~~ 481 (500)
.++.|..+.++|.+||+++
T Consensus 110 ~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 110 ARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp EEESSCCCHHHHHHHHTTC
T ss_pred EEecCCCCHHHHHHHHHhC
Confidence 7899999999999999764
No 162
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.61 E-value=7.9e-16 Score=128.56 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=91.1
Q ss_pred Eeccchhhhhh-cCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcC
Q 010804 380 LVADSLQDMVF-NSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSA 458 (500)
Q Consensus 380 l~~~~~~~~~~-~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~ 458 (500)
.+.++|+..+. +.+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..++++|++.++|+++++.+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 36788998886 5689999999999999999999999999998865 59999999999999999999999999999977
Q ss_pred CCce---------EEecC-CCCHHHHHHHHHhhcC
Q 010804 459 SGKT---------VPYEG-DRTKEDIVDFIENNRD 483 (500)
Q Consensus 459 ~~~~---------~~~~g-~~~~~~l~~~i~~~~~ 483 (500)
|+.+ .++.| ..+.++|.++|++...
T Consensus 87 G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 87 GQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp TEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 6666 57889 8999999999998753
No 163
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.61 E-value=1.9e-15 Score=123.87 Aligned_cols=105 Identities=21% Similarity=0.425 Sum_probs=90.0
Q ss_pred ccCceEEcCc-cChhhhhcc--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCc
Q 010804 29 SKEFVLTLDH-SNFSDTVSK--HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEI 105 (500)
Q Consensus 29 ~~~~v~~l~~-~~~~~~~~~--~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i 105 (500)
+.+.+..+++ ++|+.++.. +++++|+||++||++|+.+.|.+.++++.+ ++.|+.||++.... ++++|+|
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~~--l~~~~~v 90 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHPK--LNDQHNI 90 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCHH--HHHHTTC
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchHH--HHHhcCC
Confidence 4456788875 889888854 579999999999999999999999988776 28999999998887 9999999
Q ss_pred ccccEEEEEe--cCCc--eeeecCCCCCHHHHHHHHHhhcC
Q 010804 106 RGFPTIKILR--NGGK--TIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 106 ~~~P~~~~~~--~~~~--~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
.++|++++|+ +| + ...++.|. +.+.|.++|.+.+.
T Consensus 91 ~~~Pt~~~~~~~~g-~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 91 KALPTFEFYFNLNN-EWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp CSSSEEEEEEEETT-EEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CCCCEEEEEEecCC-CeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9999999995 44 4 67888998 89999999998764
No 164
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.61 E-value=1.9e-15 Score=125.09 Aligned_cols=99 Identities=17% Similarity=0.268 Sum_probs=82.8
Q ss_pred CccChhhhhc--cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEE
Q 010804 37 DHSNFSDTVS--KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKIL 114 (500)
Q Consensus 37 ~~~~~~~~~~--~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~ 114 (500)
+.++|+..+. ++++++|+||++||++|+.+.|.++++++++.+. +.|+.||++.++. ++++|+|.++|++++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~~--~~~~~~i~~~Pt~~~~ 84 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITEVPD--FNKMYELYDPCTVMFF 84 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCCT--TTTSSCSCSSCEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---eEEEEEccccCHH--HHHHcCCCCCCEEEEE
Confidence 4677887663 5899999999999999999999999999998654 9999999999888 9999999999999999
Q ss_pred ecCCceee---------ecCCCCC-HHHHHHHHHhhc
Q 010804 115 RNGGKTIQ---------EYKGPRE-ADGIVEYLKKQS 141 (500)
Q Consensus 115 ~~~~~~~~---------~~~g~~~-~~~l~~~i~~~~ 141 (500)
++| +.+. +..|... .+++.++|.+.+
T Consensus 85 ~~G-~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 85 FRN-KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp ETT-EEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred ECC-cEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 876 5544 3455553 788888887654
No 165
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.60 E-value=7.3e-16 Score=138.33 Aligned_cols=129 Identities=15% Similarity=0.191 Sum_probs=107.2
Q ss_pred HHHHHHHhcCCCCCccccCCCCCCCCCCeEEE-eccchhhhhhc--CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCC
Q 010804 349 APWVKEYKEGKVPPFRKSEPIPEENNEPVKVL-VADSLQDMVFN--SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND 425 (500)
Q Consensus 349 ~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l-~~~~~~~~~~~--~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~ 425 (500)
..|+..+..+++.+..++.. +....+.+..+ +.++|.+.+.+ .+++|+|+||++||++|+.+.|.|.+++..+.
T Consensus 87 e~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-- 163 (245)
T 1a0r_P 87 ENCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-- 163 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--
Confidence 56899999999988887654 33456678889 78999999954 37899999999999999999999999999986
Q ss_pred CceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCC-------CCHHHHHHHHHhhc
Q 010804 426 ADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGD-------RTKEDIVDFIENNR 482 (500)
Q Consensus 426 ~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~-------~~~~~l~~~i~~~~ 482 (500)
++.|++||++. ..++..|++.++||+++|..|..+.++.|. .+.+.|.+||.++.
T Consensus 164 -~v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 164 -MVKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp -TSEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred -CCEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 49999999987 556777999999999999866555566654 46789999999874
No 166
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.60 E-value=1.3e-15 Score=135.45 Aligned_cols=109 Identities=28% Similarity=0.484 Sum_probs=99.1
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
...+..+++++|+..+ ..+++++|+||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+..+++++++.++|++
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 3458899999999998 6789999999999999999999999999999876 599999999999988888999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|+.|..+.++.|..+.++|.+||++++...
T Consensus 173 ~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 173 FIFRSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp EEECTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred EEEECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 99977766789999999999999999988654
No 167
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.60 E-value=1.9e-15 Score=118.18 Aligned_cols=101 Identities=24% Similarity=0.586 Sum_probs=87.6
Q ss_pred EEEec-cchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEE
Q 010804 378 KVLVA-DSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFF 455 (500)
Q Consensus 378 ~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~ 455 (500)
..++. ++|++.+.+ .+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.++..++++++.++|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEE
Confidence 45655 888888854 68899999999999999999999999999875 59999999999988888899999999999
Q ss_pred EcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 456 RSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
|..|..+.++.| .+.++|.++|++++
T Consensus 79 ~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 976655667888 69999999998753
No 168
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.4e-15 Score=120.85 Aligned_cols=105 Identities=18% Similarity=0.348 Sum_probs=86.7
Q ss_pred eEEEec-cchhhhhh--cCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 377 VKVLVA-DSLQDMVF--NSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 377 ~~~l~~-~~~~~~~~--~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
+..++. ++|++.+. ..+++++|+||++||++|+.+.|.+.+++..++. .++.|+.+|++.+..++++|++.++|++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN-SNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG-TTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC-CCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 567887 89998884 3488999999999999999999999999988643 2699999999999888888999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
++|..|..+.++.|. +.++|.++|++.++
T Consensus 81 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 81 IIIHKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 999755556678886 55679999987653
No 169
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.60 E-value=2.4e-15 Score=121.84 Aligned_cols=105 Identities=24% Similarity=0.464 Sum_probs=91.0
Q ss_pred CCCeEEEeccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-CCCCCCCCCCcCcce
Q 010804 374 NEPVKVLVADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-ANDIPGDTFEVQGYP 451 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-~~~~~~~~~~i~~~P 451 (500)
.+.+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.+.+++..+. ++.++.+|++ .+..++++|++.++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcchHHHHHHcCCCeee
Confidence 456899999999998864 68899999999999999999999999999886 4899999998 567777889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+++++++|..+.++.|.. .+++.++|++..
T Consensus 94 t~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999997665566888865 999999998754
No 170
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.60 E-value=2.8e-15 Score=121.22 Aligned_cols=106 Identities=21% Similarity=0.409 Sum_probs=91.9
Q ss_pred CCCCeEEE-eccchhhhhhc---CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcC
Q 010804 373 NNEPVKVL-VADSLQDMVFN---SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQ 448 (500)
Q Consensus 373 ~~~~~~~l-~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~ 448 (500)
..+.+..+ +.++|++.+.. .++.++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+..++++|++.
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~ 90 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQ 90 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCC
Confidence 44557788 77899988854 58899999999999999999999999999886 5999999999998888889999
Q ss_pred cceEEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 449 GYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 449 ~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
++|++++|..|..+.++.| .+.++|.++|++.+
T Consensus 91 ~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred ccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 9999999965555667888 59999999998765
No 171
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.60 E-value=1.5e-15 Score=121.59 Aligned_cols=102 Identities=24% Similarity=0.487 Sum_probs=89.6
Q ss_pred CeEEEec-cchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 376 PVKVLVA-DSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 376 ~~~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
.+..++. ++|++.+.+ .++.++|+||++||++|+.+.|.+.+++..+ ++.++.+|++.+...+++|++.++|++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceE
Confidence 3778887 999998854 6889999999999999999999999998876 599999999999888888999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
++++.|..+.++.| .+.++|.++|++++
T Consensus 90 ~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99976655667888 68999999998753
No 172
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.59 E-value=4.1e-15 Score=122.09 Aligned_cols=104 Identities=17% Similarity=0.378 Sum_probs=85.6
Q ss_pred EcCccChhhhhcc--CCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecCh--hhhHHHHHhcCccc
Q 010804 35 TLDHSNFSDTVSK--HNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANE--EANKELASQYEIRG 107 (500)
Q Consensus 35 ~l~~~~~~~~~~~--~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~~~i~~ 107 (500)
..+.++++..+.+ +++++|+||++||++|+.+.+.+ .++++.+.+ +.++.||++. +...+++++|+|.+
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~----~~~~~vd~~~~~~~~~~l~~~~~v~~ 91 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD----TVLLQANVTANDAQDVALLKHLNVLG 91 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT----SEEEEEECTTCCHHHHHHHHHTTCCS
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC----cEEEEEeCCCCcchHHHHHHHcCCCC
Confidence 3455677777743 88999999999999999999998 888888752 8999999954 33344999999999
Q ss_pred ccEEEEEecCCcee--eecCCCCCHHHHHHHHHhhcC
Q 010804 108 FPTIKILRNGGKTI--QEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 108 ~P~~~~~~~~~~~~--~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+|++++|+.+|+.+ .++.|..+.+.|.+++.+.-+
T Consensus 92 ~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 92 LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 99999996666776 689999999999999987553
No 173
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.59 E-value=2.7e-15 Score=117.52 Aligned_cols=98 Identities=26% Similarity=0.454 Sum_probs=86.6
Q ss_pred eccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCC
Q 010804 381 VADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSAS 459 (500)
Q Consensus 381 ~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~ 459 (500)
+.++|++.+.+ .++.++|+||++||++|+.+.|.+.+++..+++ +.|+.+|++.+...++++++.++|++++|..|
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASESEVKSMPTFQFFKKG 83 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECC
Confidence 56677777743 588999999999999999999999999998864 99999999999888889999999999999766
Q ss_pred CceEEecCCCCHHHHHHHHHhhc
Q 010804 460 GKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 460 ~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+.+.++.|. +.++|.++|++++
T Consensus 84 ~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 84 QKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEEEESS-CHHHHHHHHHHHC
T ss_pred eEEEEEeCC-CHHHHHHHHHHhC
Confidence 667788998 9999999998763
No 174
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.59 E-value=4.8e-15 Score=124.68 Aligned_cols=110 Identities=17% Similarity=0.373 Sum_probs=92.8
Q ss_pred CCCeEEEe-ccchhhhhhcC-CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcce
Q 010804 374 NEPVKVLV-ADSLQDMVFNS-GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 374 ~~~~~~l~-~~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P 451 (500)
.+.+..++ .++|++.+.+. +++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+..++++|++.++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 34577786 58899888443 8899999999999999999999999999874 6999999999998888889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
++++|..|..+.++.| .+.++|.++|++.++...+
T Consensus 88 t~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 88 TFLFFKNSQKIDRLDG-AHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp EEEEEETTEEEEEEES-SCHHHHHHHHHHHSCTTSS
T ss_pred EEEEEECCEEEEEEeC-CCHHHHHHHHHHHhccccC
Confidence 9999984444557778 5888999999999876543
No 175
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.37 E-value=1.1e-16 Score=125.82 Aligned_cols=102 Identities=33% Similarity=0.710 Sum_probs=90.4
Q ss_pred eEEcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEE
Q 010804 33 VLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTI 111 (500)
Q Consensus 33 v~~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~ 111 (500)
+..+++++|...+ .++++++|.||++||++|+.+.|.+.++++.+.+. +.++.+|++.+.. ++++|++.++|++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~v~~~Pt~ 77 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK---VKVVKVNVDENPN--TAAQYGIRSIPTL 77 (106)
Confidence 5678889998655 77889999999999999999999999999988653 9999999998888 9999999999999
Q ss_pred EEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 112 KILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
++|++ |+...++.|..+.+.+.+++.+.
T Consensus 78 ~~~~~-g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 78 LLFKN-GQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 99964 57778999999999999998764
No 176
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=2.2e-15 Score=141.18 Aligned_cols=107 Identities=23% Similarity=0.449 Sum_probs=96.5
Q ss_pred CCCeEEEeccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceE
Q 010804 374 NEPVKVLVADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT 452 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~ 452 (500)
.+.+..++.++|++.+.. .+++|+|+||++||++|+.+.|.|.+++..+++ ++.|++||++.++.++++|+|.++||
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt 83 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPT 83 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCe
Confidence 346899999999997743 389999999999999999999999999999976 69999999999999999999999999
Q ss_pred EEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 453 VFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+++|..|..+.++.|..+.+.+.+||.+..
T Consensus 84 ~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 84 VYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 999976655668999999999999999876
No 177
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.59 E-value=2.4e-15 Score=122.22 Aligned_cols=95 Identities=17% Similarity=0.177 Sum_probs=84.4
Q ss_pred cCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEe--CCCCCCCCCCCCcCcceEEEEEcCCCc-eEEecC
Q 010804 391 NSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFD--ATANDIPGDTFEVQGYPTVFFRSASGK-TVPYEG 467 (500)
Q Consensus 391 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id--~~~~~~~~~~~~i~~~P~~~~~~~~~~-~~~~~g 467 (500)
..+++++|+||++||++|+.+.|.+.+++..++. ++.++.+| ++.+..++++|++.++|++++|+++++ +.++.|
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEES
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecC
Confidence 5688999999999999999999999999999864 69999999 888888888899999999999985555 557889
Q ss_pred CCCHHHHHHHHHhhcCCCCC
Q 010804 468 DRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 468 ~~~~~~l~~~i~~~~~~~~~ 487 (500)
..+.++|.++|++++..+.+
T Consensus 102 ~~~~~~l~~~l~~~~~~~~~ 121 (126)
T 2l57_A 102 LMRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp CCCHHHHHHHHHHHCCCCCC
T ss_pred CCCHHHHHHHHHHHhccccc
Confidence 99999999999999877643
No 178
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.59 E-value=1.9e-13 Score=138.49 Aligned_cols=300 Identities=13% Similarity=0.113 Sum_probs=223.4
Q ss_pred CceEEcCccChhhhhccCC--eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 31 EFVLTLDHSNFSDTVSKHN--FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~~--~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+..+++ ++.++..++ ..+|.|+...... ..+.|.++|..+.+. +.|+.++ . +++++++.
T Consensus 123 ~~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~~---~~~~f~~~A~~~~~~---~~F~~~~-----~--~~~~~~~~-- 185 (504)
T 2b5e_A 123 PAVAVVAD--LPAYLANETFVTPVIVQSGKIDAD---FNATFYSMANKHFND---YDFVSAE-----N--ADDDFKLS-- 185 (504)
T ss_dssp CSEEECSC--HHHHHHHSCCSSCEEEEEESCCHH---HHHHHHHHHHHTTTT---CEEEEEE-----C--TTSCCEEE--
T ss_pred CcceeHHH--HHHHHhcCCCceEEEEEeCCCCch---HHHHHHHHHHHhhcC---cEEEEEH-----H--HHHhcCCe--
Confidence 34666766 788887666 6667676665443 567899999999765 8999887 3 77888875
Q ss_pred cEEEEEecCCceeeecCCC-C---CHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCC--chhHHHHHH
Q 010804 109 PTIKILRNGGKTIQEYKGP-R---EADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFS--GEEFENYTA 182 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g~-~---~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~f~~ 182 (500)
+++|+..+ ....|.|. . +.+.|.+||....-|.+.++ +.+.+..+.+......++++...+ ......+.+
T Consensus 186 --i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~-t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 261 (504)
T 2b5e_A 186 --IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEI-DGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTE 261 (504)
T ss_dssp --EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBC-CHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHH
T ss_pred --EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccC-CHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHH
Confidence 77887643 55678998 6 99999999999999999999 777888888877776666664322 345678999
Q ss_pred HHHHhcCCceEEEeecc---cccCCCCCCCCCCeEEEeccCCCcc-ccc--CC-----------CCHHHHHHHHHHccC-
Q 010804 183 LAEKLRSDYEFGHTQNA---KLLPRGESSVTGPVVRLFKPFDELF-VDF--KD-----------FKVDALEKFVEESSI- 244 (500)
Q Consensus 183 ~a~~~~~~~~f~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~-~~~--~~-----------~~~~~l~~~i~~~~~- 244 (500)
+|..+++.+.|+.+... .++..++.....|.++++...+... .+. ++ ++.+.|..|+.....
T Consensus 262 ~a~~~~~~i~F~~id~~~~~~~~~~~gl~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g 341 (504)
T 2b5e_A 262 LAKKNRGLMNFVSIDARKFGRHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKG 341 (504)
T ss_dssp HHHHTTTTCEEEEEEHHHHTTHHHHTTCCSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHT
T ss_pred HHHhcCCeeEEEEEehhhhHHHHHHcCCcccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcC
Confidence 99999999999999943 3455522322349999998743333 333 45 788999999976421
Q ss_pred ----------------CcEEEeCCCCCCccchhhh-hcCCCceEEEEEeCCCCCchHHHHHHHHHHHhhc-C-ceeEEEE
Q 010804 245 ----------------PIVTVFNSDANNHPFVIKF-FNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYK-G-QGISFLL 305 (500)
Q Consensus 245 ----------------p~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~-~-~~~~f~~ 305 (500)
..+..++. .++... ...++++++.|....|..|+.....+.+++.++. + ..+.++.
T Consensus 342 ~~~p~~~s~~~p~~~~~~v~~l~~-----~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~ 416 (504)
T 2b5e_A 342 DASPIVKSQEIFENQDSSVFQLVG-----KNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAK 416 (504)
T ss_dssp CCCCCCCCCCCCCCCSCSEEEECT-----TTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCChhhhcCCCCccccccceeccc-----ccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEE
Confidence 22455555 566665 4568899999999999999999999999999987 2 2499999
Q ss_pred EcccchhhHHhhcCCCCCCCceEEEEeCCCC--cc-CCCCCChhhHHHHHHHHhcCCC
Q 010804 306 GDLEASQGAFQYFGLQESQVPLIVIQTNDGQ--KY-LKPNLDADQIAPWVKEYKEGKV 360 (500)
Q Consensus 306 ~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~~--~y-~~~~~~~~~i~~fi~~~~~G~l 360 (500)
+|+...... . +++. .+|+++++..+.. .. +.|..+.+.+.+|+++.....+
T Consensus 417 vd~~~~~~~-~-~~v~--~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 417 LDHTENDVR-G-VVIE--GYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp EEGGGCCCS-S-CCCS--SSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred ecCCccccc-c-CCce--ecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 999866533 4 8887 8999999955443 45 7789999999999999865544
No 179
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.58 E-value=1.6e-15 Score=120.67 Aligned_cols=100 Identities=21% Similarity=0.438 Sum_probs=84.7
Q ss_pred CeEEEecc-chhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEE
Q 010804 376 PVKVLVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVF 454 (500)
Q Consensus 376 ~~~~l~~~-~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~ 454 (500)
.+..++.. .|++.+ +.+++++|+||++||++|+.+.|.|.+++..+.+ +.|+.+|++.+..++++|++.++|+++
T Consensus 13 ~~~~~~~~~~~~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 13 SITKLTNLTEFRNLI-KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp GSCBCCSHHHHHHHH-HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred heeecCCHHHHHHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 34555554 455544 6789999999999999999999999999998864 999999999998888889999999999
Q ss_pred EEcCCCceEEecCCCCHHHHHHHHHh
Q 010804 455 FRSASGKTVPYEGDRTKEDIVDFIEN 480 (500)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~l~~~i~~ 480 (500)
+|..|..+.++.|.. .++|.++|++
T Consensus 89 ~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred EEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 996665566888988 9999999975
No 180
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.58 E-value=7.5e-14 Score=125.59 Aligned_cols=195 Identities=13% Similarity=0.192 Sum_probs=151.5
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEE
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTI 111 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~ 111 (500)
.+.-.+.++++.+++.++.++|.|+++|| ....+.|.++|+.+. . +.|+... +.. +|+++++++ |++
T Consensus 11 ~~~l~s~~~~~~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~---~~F~~t~---~~~--v~~~~~v~~-p~i 77 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATEVAVIGFFQDLE---IPAVPILHSMVQKFP-G---VSFGIST---DSE--VLTHYNITG-NTI 77 (227)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCSC---STHHHHHHHHTTTCT-T---SEEEEEC---CHH--HHHHTTCCS-SEE
T ss_pred CeeeCCHHHHHHHHhcCCeEEEEEecCCC---chhHHHHHHHHHhCC-C---ceEEEEC---CHH--HHHHcCCCC-CeE
Confidence 33334668999999999999999999975 678899999999983 3 8888754 334 999999998 999
Q ss_pred EEEecCCceeeecCC----CCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCC-C---chhHHHHHHH
Q 010804 112 KILRNGGKTIQEYKG----PREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNF-S---GEEFENYTAL 183 (500)
Q Consensus 112 ~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~-~---~~~~~~f~~~ 183 (500)
++|++..+....|.| .++.+.|.+||.....|.+.++ +.+.+..+.+......+++|.+. + ....+.|+++
T Consensus 78 ~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~-t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~v 156 (227)
T 4f9z_D 78 CLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEY-NPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKA 156 (227)
T ss_dssp EEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEEC-CHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHH
T ss_pred EEEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeec-CcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHH
Confidence 999975455567884 7999999999999999999999 77778887776644554445332 2 3456899999
Q ss_pred HHHhcCCceEEEeecc-----cccCCCCCCCC---CCeEEEeccCCCc-c-cccCCCCHHHHHHHHHHc
Q 010804 184 AEKLRSDYEFGHTQNA-----KLLPRGESSVT---GPVVRLFKPFDEL-F-VDFKDFKVDALEKFVEES 242 (500)
Q Consensus 184 a~~~~~~~~f~~~~~~-----~~~~~~~~~~~---~p~~~~~~~~~~~-~-~~~~~~~~~~l~~~i~~~ 242 (500)
|+.+++.+.|+.+... ..+.. ++++ .|+++++...+.. . ...++++.+.|..|++..
T Consensus 157 Ak~~k~~i~F~~vd~~~~~~~~~l~~--fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 157 AKLFQGKILFILVDSGMKENGKVISF--FKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHTTTTCEEEEEETTSGGGHHHHHH--TTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHhhCCEEEEEeCCccHhHHHHHHH--cCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 9999999999998843 23445 5655 3999999865543 3 335789999999999764
No 181
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2.3e-16 Score=130.26 Aligned_cols=106 Identities=16% Similarity=0.329 Sum_probs=91.3
Q ss_pred CCeEEEeccchhhhhhcCC-CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcC-----
Q 010804 375 EPVKVLVADSLQDMVFNSG-KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQ----- 448 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~-~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~----- 448 (500)
..+..++.++|++.+.+.. ++++|+||++||++|+.+.|.|.+++..+++ .++.|+.+|++.+..++++|++.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC-TGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS-SSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 4588999999999996554 4899999999999999999999999999864 26999999999998888889998
Q ss_pred -cceEEEEEcCCCceEEecCCCCHHHHHHHHHhh
Q 010804 449 -GYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 449 -~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
++|++++|..|..+.++.|..+.+.|.+||.+.
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CCCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999997666677889988887777776543
No 182
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.57 E-value=6.8e-16 Score=127.21 Aligned_cols=109 Identities=12% Similarity=0.182 Sum_probs=79.1
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCC--ChhHhhhhHHHHHHHHHcCCCCceE--EEEEeCCCCCCCCCCCCcCcce
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPW--CGHCKKLAPILDEVAVSYQNDADVV--IAKFDATANDIPGDTFEVQGYP 451 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~~~~~~~~~~~~--~~~id~~~~~~~~~~~~i~~~P 451 (500)
.+..++.++|++.+ ..++.++|+|+++| |++|+.+.|.|.+++..+ + ++. |++||++.+..++++|+|+++|
T Consensus 18 ~~~~l~~~~f~~~i-~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWI-KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHH-HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 47789999999988 45556888999877 999999999999999988 4 577 9999999998898889999999
Q ss_pred EEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCCC
Q 010804 452 TVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPK 488 (500)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 488 (500)
|+++|.+|..+.++.|..+.++|.++|++.++.+...
T Consensus 94 T~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~ 130 (142)
T 2es7_A 94 ATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQ 130 (142)
T ss_dssp EEEEESCC----CEESCCCHHHHHHHHHHHHC-----
T ss_pred eEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccC
Confidence 9999976666778999999999999999998765443
No 183
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=8e-15 Score=120.37 Aligned_cols=101 Identities=15% Similarity=0.232 Sum_probs=86.5
Q ss_pred cCceEEcCccChhhhhcc---CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 30 KEFVLTLDHSNFSDTVSK---HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 30 ~~~v~~l~~~~~~~~~~~---~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
...+..++.++|...+.+ +++++|+||++||++|+.+.|.|.++++++. ++.|+.||++... ++|+|.
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~~-----~~~~i~ 79 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSCI-----EHYHDN 79 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSSC-----SSCCSS
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcCc-----ccCCCC
Confidence 355788899999998853 3689999999999999999999999999874 3999999998754 689999
Q ss_pred cccEEEEEecCCceeeecCCCC-------CHHHHHHHHHhh
Q 010804 107 GFPTIKILRNGGKTIQEYKGPR-------EADGIVEYLKKQ 140 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~-------~~~~l~~~i~~~ 140 (500)
++||+++|++| +.+.++.|.. +.+.|.+++.+.
T Consensus 80 ~~Pt~~~~~~G-~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 80 CLPTIFVYKNG-QIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp CCSEEEEESSS-SCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEECC-EEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99999999954 7778888875 788899999875
No 184
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.57 E-value=2e-15 Score=119.29 Aligned_cols=102 Identities=15% Similarity=0.266 Sum_probs=87.3
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
+..++.++| +.+ ..+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+..+++++++.++|++++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 345678889 555 567899999999999999999999999998765 589999999999888888999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
.+|..+.++.|..+.++|.++|....+
T Consensus 80 ~~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 80 RDGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp ESSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred ECCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 666657789999999999999987654
No 185
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.57 E-value=4.9e-15 Score=121.56 Aligned_cols=95 Identities=23% Similarity=0.495 Sum_probs=83.1
Q ss_pred hhhhhccCCeEEEEEECCCChhhhhhhHHHH--HHHHHhcCCCCCeEEEEEec---ChhhhHHHHHhcCc---ccccEEE
Q 010804 41 FSDTVSKHNFIVVEFYAPWCGHCKKLAPEYE--KAASELSSHDPPVVLAKVDA---NEEANKELASQYEI---RGFPTIK 112 (500)
Q Consensus 41 ~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~--~~~~~~~~~~~~v~~~~vd~---~~~~~~~~~~~~~i---~~~P~~~ 112 (500)
+.....++++++|+||++||++|+.+.|.+. ++++.+.+. +.++.||+ +.... ++++|+| .++|+++
T Consensus 22 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~~~~~~--l~~~~~v~~~~~~Pt~~ 96 (133)
T 3fk8_A 22 LAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNFDRNLE--LSQAYGDPIQDGIPAVV 96 (133)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTTTSSHH--HHHHTTCGGGGCSSEEE
T ss_pred HHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcccchHH--HHHHhCCccCCccceEE
Confidence 4444467999999999999999999999999 999988654 99999999 66666 9999999 9999999
Q ss_pred EEecCCceeeecCC-------CCCHHHHHHHHHhh
Q 010804 113 ILRNGGKTIQEYKG-------PREADGIVEYLKKQ 140 (500)
Q Consensus 113 ~~~~~~~~~~~~~g-------~~~~~~l~~~i~~~ 140 (500)
+|+.+|+.+.++.| ..+.+.+.+|+.+.
T Consensus 97 ~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 97 VVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 99767788888888 67899999998764
No 186
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.33 E-value=2.7e-16 Score=123.53 Aligned_cols=103 Identities=27% Similarity=0.589 Sum_probs=92.2
Q ss_pred eEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEE
Q 010804 377 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR 456 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~ 456 (500)
+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+...++++++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 567889999988877889999999999999999999999999988875 699999999999999999999999999999
Q ss_pred cCCCceEEecCCCCHHHHHHHHHhh
Q 010804 457 SASGKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 457 ~~~~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
+.|....++.|..+.+++.++|++.
T Consensus 81 ~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 KNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 6555566888999999999999865
No 187
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.55 E-value=1.2e-15 Score=125.52 Aligned_cols=106 Identities=17% Similarity=0.239 Sum_probs=90.1
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeC---------CCCCCCCCC
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDA---------TANDIPGDT 444 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~---------~~~~~~~~~ 444 (500)
.+.+..++.++|++.+.+ +++|+||++||++|+.+.|.|.+++..++ +.|+.+|+ +.+..++++
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 345888999999998833 99999999999999999999999998774 88999999 666667778
Q ss_pred CCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCC
Q 010804 445 FEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 445 ~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
|++.++|++++|..|..+.++.|..+.+.+.+++++..+.+.
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp HTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC----
T ss_pred cCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 999999999999866667789999999999999999887643
No 188
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.55 E-value=8.2e-15 Score=121.23 Aligned_cols=109 Identities=22% Similarity=0.384 Sum_probs=93.1
Q ss_pred CCCCeEEEe-ccchhhhhh---cCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcC
Q 010804 373 NNEPVKVLV-ADSLQDMVF---NSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQ 448 (500)
Q Consensus 373 ~~~~~~~l~-~~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~ 448 (500)
..+.+..++ .++|.+.+. ..++.++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+..++++|++.
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~ 98 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIK 98 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCC
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCC
Confidence 345567774 789998884 348899999999999999999999999999884 5999999999998888889999
Q ss_pred cceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCC
Q 010804 449 GYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 449 ~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|+++++..|..+.++.|. +.++|.++|++.++..
T Consensus 99 ~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 99 ATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp EESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred cccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 99999999655556678887 8999999999887653
No 189
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.55 E-value=3.3e-15 Score=120.29 Aligned_cols=105 Identities=22% Similarity=0.469 Sum_probs=90.7
Q ss_pred CCeEEEec-cchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 375 EPVKVLVA-DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 375 ~~~~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
..+..++. ++|++.+ +.+++++|+||++||++|+.+.|.|.+++..+.+. ++.|+.+|++.+..++++|++.++|++
T Consensus 15 ~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 15 GSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPTF 92 (121)
T ss_dssp CCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred cceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccEE
Confidence 44666655 8888888 77899999999999999999999999999887542 499999999999888888999999999
Q ss_pred EEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 454 FFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
++|+.|..+.++.|. +.++|.+||++.+
T Consensus 93 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 999766556688898 9999999998765
No 190
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.55 E-value=1e-14 Score=133.08 Aligned_cols=112 Identities=26% Similarity=0.520 Sum_probs=95.9
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCC-CCceEEEEEeC--CCCCCCCCCCCcCcc
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDA--TANDIPGDTFEVQGY 450 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~-~~~~~~~~id~--~~~~~~~~~~~i~~~ 450 (500)
...+..++.++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+.+ ..++.|+.+|+ +.+..++++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 456999999999999977889999999999999999999999999999864 23699999999 567778888999999
Q ss_pred eEEEEEcCCCc-----eEEecCCCCHHHHHHHHHhhcCCCC
Q 010804 451 PTVFFRSASGK-----TVPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 451 P~~~~~~~~~~-----~~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
|++++|..|++ ..++.| .+.+.|.++|.+++.+..
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 99999987544 234556 799999999999886543
No 191
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.55 E-value=5.2e-15 Score=117.62 Aligned_cols=105 Identities=23% Similarity=0.432 Sum_probs=90.2
Q ss_pred CCeEEE-eccchhhhhhc---CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcc
Q 010804 375 EPVKVL-VADSLQDMVFN---SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGY 450 (500)
Q Consensus 375 ~~~~~l-~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~ 450 (500)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+...+++|++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 446677 67899988854 58899999999999999999999999999886 599999999998888888999999
Q ss_pred eEEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 451 PTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 451 P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
|++++|..|..+.++.| .+.++|.++|++.++
T Consensus 81 Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 PTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp TEEEEEETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred cEEEEEeCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 99999965554557778 688999999988753
No 192
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.55 E-value=6.6e-15 Score=117.90 Aligned_cols=104 Identities=27% Similarity=0.516 Sum_probs=87.8
Q ss_pred CeEEE--eccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEE
Q 010804 376 PVKVL--VADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV 453 (500)
Q Consensus 376 ~~~~l--~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~ 453 (500)
.+..+ +..+|.+.+.+.++.++|+||++||++|+.+.|.|.+++..+ . ++.|+.+|++.+..++++|++.++|++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 36667 577888777677899999999999999999999999999988 3 699999999999888888999999999
Q ss_pred EEEcC----CCceEEecCCCCHHHHHHHHHhhcC
Q 010804 454 FFRSA----SGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 454 ~~~~~----~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
++|+. |..+.++.|..+ ++|.+.|.++..
T Consensus 81 ~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~ 113 (118)
T 2f51_A 81 FFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKH 113 (118)
T ss_dssp EEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC-
T ss_pred EEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhh
Confidence 99976 444567888654 569999988764
No 193
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.54 E-value=1.3e-15 Score=122.18 Aligned_cols=99 Identities=13% Similarity=0.215 Sum_probs=81.6
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC------CCCCCCCCcCc
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN------DIPGDTFEVQG 449 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~------~~~~~~~~i~~ 449 (500)
.+..++.++|...+ ..+++++|+||++||++|+.+.|.|.+++..++. .+.++ |++.. ..+++++++.+
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~--~~~~~~~~~~~~~~~~~~~i~~ 87 (118)
T 1zma_A 13 DLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFI--NSEEPSQLNDLQAFRSRYGIPT 87 (118)
T ss_dssp TSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEE--ETTCGGGHHHHHHHHHHHTCCS
T ss_pred hhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEE--ECCCcCcHHHHHHHHHHcCCCC
Confidence 46788999999887 5678999999999999999999999999988763 45554 44432 24456799999
Q ss_pred ceEEEEEcCCCceEEecCCCCHHHHHHHHH
Q 010804 450 YPTVFFRSASGKTVPYEGDRTKEDIVDFIE 479 (500)
Q Consensus 450 ~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 479 (500)
+|++++|.+|+.+.++.|..+.++|.+||+
T Consensus 88 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 88 VPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred CCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 999999976666778999999999999986
No 194
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.54 E-value=9e-15 Score=117.22 Aligned_cols=106 Identities=25% Similarity=0.461 Sum_probs=90.9
Q ss_pred CCeEEE-eccchhhhhhc---CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcc
Q 010804 375 EPVKVL-VADSLQDMVFN---SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGY 450 (500)
Q Consensus 375 ~~~~~l-~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~ 450 (500)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.|.+++..++ ++.|+.+|++.+..++++|++.++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcC
Confidence 446677 57899988854 48899999999999999999999999999886 599999999998888888999999
Q ss_pred eEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 451 PTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 451 P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
|++++|+.|..+.++.| .+.+++.++|++.++.
T Consensus 83 Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 83 PTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred cEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 99999966555667788 6899999999988754
No 195
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.54 E-value=2.3e-14 Score=117.31 Aligned_cols=109 Identities=15% Similarity=0.255 Sum_probs=95.2
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCc--ceEE
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQG--YPTV 453 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~--~P~~ 453 (500)
.+.+++.++|...+ +.+.+++|+||++ |++|+.+.|.++++|..+++ ++.|+++|++.++.+.+.|++++ +|++
T Consensus 7 lv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 7 LIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 37788999999876 6788999999999 89999999999999999976 69999999999999999999999 9999
Q ss_pred EEEcC-CCceEEec--CCCCHHHHHHHHHhhcCCCCCC
Q 010804 454 FFRSA-SGKTVPYE--GDRTKEDIVDFIENNRDKAAPK 488 (500)
Q Consensus 454 ~~~~~-~~~~~~~~--g~~~~~~l~~~i~~~~~~~~~~ 488 (500)
++|.. +++..++. |..+.+.|.+||++.++++..+
T Consensus 83 ~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p 120 (133)
T 2djk_A 83 AIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEP 120 (133)
T ss_dssp EEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCC
T ss_pred EEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCc
Confidence 99975 34445665 9999999999999998766543
No 196
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.53 E-value=7.8e-15 Score=120.12 Aligned_cols=107 Identities=19% Similarity=0.306 Sum_probs=89.0
Q ss_pred CCCCeEEEec-cchhhhhhcC-CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcc
Q 010804 373 NNEPVKVLVA-DSLQDMVFNS-GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGY 450 (500)
Q Consensus 373 ~~~~~~~l~~-~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~ 450 (500)
..+.+..++. ++|...+.+. +++++|+||++||++|+.+.|.|.+++..+ ++.|+.+|++.+..++++|++.++
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~ 93 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKAL 93 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCC
Confidence 3455777875 8888877543 579999999999999999999999987765 489999999999888888999999
Q ss_pred eEEEEEc--CCC--ceEEecCCCCHHHHHHHHHhhcCC
Q 010804 451 PTVFFRS--ASG--KTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 451 P~~~~~~--~~~--~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
|++++|. .|. .+.++.|. +.++|.++|++.+.+
T Consensus 94 Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 94 PTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred CEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9999994 444 35578887 899999999988754
No 197
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.52 E-value=1.6e-15 Score=123.97 Aligned_cols=107 Identities=24% Similarity=0.589 Sum_probs=92.0
Q ss_pred ccCceEEc-CccChhhhhcc----CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhc
Q 010804 29 SKEFVLTL-DHSNFSDTVSK----HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQY 103 (500)
Q Consensus 29 ~~~~v~~l-~~~~~~~~~~~----~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~ 103 (500)
....+..+ +.++|+..+.. +++++|+||++||++|+.+.|.+.++++.+. ++.|+.||++.... ++++|
T Consensus 12 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~--~~~~~ 85 (130)
T 1wmj_A 12 EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELKE--VAEKY 85 (130)
T ss_dssp SCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSGG--GHHHH
T ss_pred cCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchHH--HHHHc
Confidence 34456667 55889988854 8899999999999999999999999999875 28899999999888 99999
Q ss_pred CcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 104 EIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 104 ~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
+|.++|++++|++ |+...++.| .+.+.+.+++.+.+..
T Consensus 86 ~v~~~Pt~~~~~~-g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 86 NVEAMPTFLFIKD-GAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TCCSSCCCCBCTT-TTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred CCCccceEEEEeC-CeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9999999999965 477788889 5888999999988754
No 198
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.51 E-value=1.4e-14 Score=128.57 Aligned_cols=102 Identities=24% Similarity=0.408 Sum_probs=87.8
Q ss_pred CceEEc-CccChhhhhccC---CeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 31 EFVLTL-DHSNFSDTVSKH---NFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 31 ~~v~~l-~~~~~~~~~~~~---~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
..|..+ +.++|...+... ++++|.||++||++|+.+.|.|..+++.+. ++.|+.||++ .+. ++.+|+|.
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~-~~~--l~~~~~i~ 171 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS-NTG--AGDRFSSD 171 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH-HHT--CSTTSCGG
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC-cHH--HHHHCCCC
Confidence 457778 889999998543 899999999999999999999999998874 3999999998 556 99999999
Q ss_pred cccEEEEEecCCceeeecCCCCCH-------HHHHHHHHhh
Q 010804 107 GFPTIKILRNGGKTIQEYKGPREA-------DGIVEYLKKQ 140 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~~~~-------~~l~~~i~~~ 140 (500)
++||+++|++| +.+.++.|..+. +.|.+||.+.
T Consensus 172 ~~PTl~~~~~G-~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 172 VLPTLLVYKGG-ELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp GCSEEEEEETT-EEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCEEEEEECC-EEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 99999999865 778889887664 8888888864
No 199
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.51 E-value=3.1e-14 Score=127.83 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=92.9
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEE--CCCChhHhhhhHHHHHHHHHcCC-CCceEEEEEeCCC-----CCCCCCCC
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFY--APWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATA-----NDIPGDTF 445 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~--~~~c~~c~~~~~~~~~~~~~~~~-~~~~~~~~id~~~-----~~~~~~~~ 445 (500)
.+.+..|+..+|++.+ +.+++|+|.|| +|||+ +.|.|.+++..+.+ ..++.|++|||+. +..++++|
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 3558899999999966 77889999999 99998 99999999999854 3479999999998 77888899
Q ss_pred CcC--cceEEEEEcCCC-c-eEEe--cCCCCHHHHHHHHHhhcCC
Q 010804 446 EVQ--GYPTVFFRSASG-K-TVPY--EGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 446 ~i~--~~P~~~~~~~~~-~-~~~~--~g~~~~~~l~~~i~~~~~~ 484 (500)
+|+ ++||+++|+ |. . +.+| .|..+.+.|.+||+++++.
T Consensus 90 ~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~ 133 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPL 133 (248)
T ss_dssp TCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSC
T ss_pred CCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhcc
Confidence 999 999999998 76 2 6788 8999999999999999764
No 200
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.50 E-value=4.8e-14 Score=113.75 Aligned_cols=101 Identities=15% Similarity=0.283 Sum_probs=84.3
Q ss_pred ceEEcCccChhhhhcc--CCeEEEEEECC-------CChhhhhhhHHHHHHHHHhcCCCCCeEEEEEec-------Chhh
Q 010804 32 FVLTLDHSNFSDTVSK--HNFIVVEFYAP-------WCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA-------NEEA 95 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~--~~~~lv~f~~~-------~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~-------~~~~ 95 (500)
.+...+.++|...+.+ +++++|+||++ ||++|+.+.|.+.++++.+.+. +.|+.||+ +...
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG---CVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT---EEEEEEECCCHHHHHCTTC
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCC---cEEEEEECCCchhhhchhH
Confidence 3556788899998865 89999999999 9999999999999999887653 99999999 5666
Q ss_pred hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 96 NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 96 ~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
. ++++|+|.++|++++|+++ .....+.| .+.+.|.+|+.+
T Consensus 83 ~--~~~~~~i~~~Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 D--FRKNLKVTAVPTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp H--HHHHHCCCSSSEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred H--HHHHCCCCeeCEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 6 9999999999999999975 44444554 567888888864
No 201
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.49 E-value=1.3e-13 Score=103.20 Aligned_cols=83 Identities=24% Similarity=0.435 Sum_probs=74.7
Q ss_pred CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHH
Q 010804 394 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKED 473 (500)
Q Consensus 394 ~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~ 473 (500)
..++++||++||++|+.+.|.+.+++..+++ ++.++.+|++.+....+++++.++|++++ +++. ++.|..+.++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~---~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI---NGDV-EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE---TTEE-ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE---CCEE-eeecCCCHHH
Confidence 4689999999999999999999999999875 69999999999999999999999999988 4455 8889899999
Q ss_pred HHHHHHhhc
Q 010804 474 IVDFIENNR 482 (500)
Q Consensus 474 l~~~i~~~~ 482 (500)
+.++|++++
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998753
No 202
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.49 E-value=5e-14 Score=126.41 Aligned_cols=103 Identities=20% Similarity=0.346 Sum_probs=86.9
Q ss_pred CceEEc-CccChhhhhc---cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcc
Q 010804 31 EFVLTL-DHSNFSDTVS---KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIR 106 (500)
Q Consensus 31 ~~v~~l-~~~~~~~~~~---~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~ 106 (500)
..|..+ +..+|...+. +++++||.||++||++|+.+.|.|.++++.+.+ +.|+.||++. .. ++.+|+|.
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~----v~f~kVd~d~-~~--l~~~~~I~ 184 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM----VKFCKIKASN-TG--AGDRFSSD 184 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT----SEEEEEEHHH-HC--CTTSSCTT
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC----CEEEEEeCCc-HH--HHHHCCCC
Confidence 457788 7899999984 378999999999999999999999999999753 9999999977 55 89999999
Q ss_pred cccEEEEEecCCceeeecCCC-------CCHHHHHHHHHhhc
Q 010804 107 GFPTIKILRNGGKTIQEYKGP-------READGIVEYLKKQS 141 (500)
Q Consensus 107 ~~P~~~~~~~~~~~~~~~~g~-------~~~~~l~~~i~~~~ 141 (500)
++||+++|++| +.+.++.|. .+.+.|..||.+.-
T Consensus 185 ~~PTll~~~~G-~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 185 VLPTLLVYKGG-ELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp TCSEEEEEETT-EEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred CCCEEEEEECC-EEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 99999999965 777777764 35667888888753
No 203
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.49 E-value=6e-14 Score=105.08 Aligned_cols=83 Identities=30% Similarity=0.502 Sum_probs=74.0
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCCCC
Q 010804 49 NFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPR 128 (500)
Q Consensus 49 ~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~ 128 (500)
.+.++.||++||++|+.+.|.+.++++++.+. +.+..+|++.++. ++++|++.++|++++ +| +. ++.|..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~~~--~~~~~~v~~~Pt~~~--~G-~~--~~~G~~ 72 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDA---VEVEYINVMENPQ--KAMEYGIMAVPTIVI--NG-DV--EFIGAP 72 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSS---EEEEEEESSSSCC--TTTSTTTCCSSEEEE--TT-EE--ECCSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCc---eEEEEEECCCCHH--HHHHCCCcccCEEEE--CC-EE--eeecCC
Confidence 46799999999999999999999999998643 9999999999888 999999999999998 44 54 899999
Q ss_pred CHHHHHHHHHhhc
Q 010804 129 EADGIVEYLKKQS 141 (500)
Q Consensus 129 ~~~~l~~~i~~~~ 141 (500)
+.+.+.+++.+.+
T Consensus 73 ~~~~l~~~l~~~l 85 (85)
T 1fo5_A 73 TKEALVEAIKKRL 85 (85)
T ss_dssp SSHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhC
Confidence 9999999998753
No 204
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.49 E-value=7.6e-14 Score=107.03 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=82.9
Q ss_pred ceEEc-CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh--HHHHHhcCccc-
Q 010804 32 FVLTL-DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN--KELASQYEIRG- 107 (500)
Q Consensus 32 ~v~~l-~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~~~i~~- 107 (500)
....+ +.++|+++++++++++|+|+|.||++|+.+.|.+++.++. . ++.++.||.+..+. .++++++||++
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCchhhHHHHHHhCCccC
Confidence 34455 4567999998899999999999999999999999999874 2 28899999888754 34899999995
Q ss_pred ccEEEEEecCCceeeecCCCCCHHHHHHHH
Q 010804 108 FPTIKILRNGGKTIQEYKGPREADGIVEYL 137 (500)
Q Consensus 108 ~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i 137 (500)
.|++++|++|...+..-.+..+.+.|.+.+
T Consensus 82 sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999999998744445577889998887654
No 205
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.23 E-value=2.3e-15 Score=123.04 Aligned_cols=102 Identities=20% Similarity=0.332 Sum_probs=86.6
Q ss_pred ccChhhhhccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEE
Q 010804 38 HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKIL 114 (500)
Q Consensus 38 ~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~ 114 (500)
++.+.....++++++|+||++||++|+.+.|.+ .++++.+.+. +.++.||++.+...+++++|+|.++|++++|
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR---FVVASVSVDTPEGQELARRYRVPGTPTFVFL 85 (130)
Confidence 556777778899999999999999999999999 8888877653 8899999965544559999999999999999
Q ss_pred ec-CCce--eeecCCCCCHHHHHHHHHhhcC
Q 010804 115 RN-GGKT--IQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 115 ~~-~~~~--~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+. +|+. +.++.|..+.+.|.++|.+.+.
T Consensus 86 d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 86 VPKAGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 63 4577 7889999999999999988764
No 206
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.48 E-value=2.7e-13 Score=111.44 Aligned_cols=106 Identities=19% Similarity=0.333 Sum_probs=88.8
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh------------------
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------ 93 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------ 93 (500)
.+..++.+.+.....++++++|.||++||++|+...+.+.++++++. ++.++.|+++.
T Consensus 9 ~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (136)
T 1zzo_A 9 SAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYPVKTFT 84 (136)
T ss_dssp EEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTTCTTSE
T ss_pred ccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcCCCceE
Confidence 45566667676666678999999999999999999999999999986 38899999854
Q ss_pred ---hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 94 ---EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 94 ---~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+....++++|+|.++|++++++.+|+.. .+.|..+.+.+.+++.+.+.
T Consensus 85 ~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 85 QLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred EEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 2223499999999999999998777877 99999999999999988763
No 207
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.48 E-value=7e-14 Score=125.18 Aligned_cols=103 Identities=17% Similarity=0.320 Sum_probs=91.4
Q ss_pred CCeEEEeccchhhhhhcCCCeEEEEEEC--CCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-----CCCCCCCCCCc
Q 010804 375 EPVKVLVADSLQDMVFNSGKNVLLEFYA--PWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-----ANDIPGDTFEV 447 (500)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~--~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-----~~~~~~~~~~i 447 (500)
..+..|+..+|++.+ +.+++|+|.||+ |||+ +.|.|.+++..+.+..++.|++||++ .+..++++|+|
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 458889999999977 678899999999 9999 99999999999875457999999955 47778889999
Q ss_pred C--cceEEEEEcCCC--ceEEecCCCCHHHHHHHHHhhc
Q 010804 448 Q--GYPTVFFRSASG--KTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 448 ~--~~P~~~~~~~~~--~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
+ ++||+++|+.|. .+.+|.|..+.+.|.+||++++
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 999999998877 3779999999999999999885
No 208
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.48 E-value=4.8e-14 Score=121.21 Aligned_cols=102 Identities=14% Similarity=0.292 Sum_probs=82.5
Q ss_pred EcCccChhhhh----ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChhhhHHH--------
Q 010804 35 TLDHSNFSDTV----SKHNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEEANKEL-------- 99 (500)
Q Consensus 35 ~l~~~~~~~~~----~~~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~~~-------- 99 (500)
..+..+|+..+ .++++++|+||++||++|+.+.+.+ ..+.+.+++. +.++.||++.... +
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~---~~~v~v~~d~~~~--~~~~~~~~~ 104 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINND---YVLITLYVDNKTP--LTEPVKIME 104 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEETTCCCE--EEEEEEEEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCC---EEEEEEecCcccc--cchhhhhhh
Confidence 34566677766 6899999999999999999985444 4555555433 8999999987653 3
Q ss_pred ------------------HHhcCcccccEEEEEecCCceeeecCCCCC-HHHHHHHHHhhc
Q 010804 100 ------------------ASQYEIRGFPTIKILRNGGKTIQEYKGPRE-ADGIVEYLKKQS 141 (500)
Q Consensus 100 ------------------~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~-~~~l~~~i~~~~ 141 (500)
+++|+|.++|++++++.+|+.+.++.|..+ .+.+.+++.+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 105 NGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp TTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999877788889999998 999999998765
No 209
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.48 E-value=3.7e-13 Score=110.64 Aligned_cols=104 Identities=18% Similarity=0.356 Sum_probs=87.3
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE------------------ 94 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------------ 94 (500)
+..++.+.+.....++++++|.||++||++|+...+.+.++++++. ++.++.|+++..
T Consensus 9 l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (136)
T 1lu4_A 9 ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYNLNFTNL 84 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHTCCSEEE
T ss_pred eecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcCCCceEE
Confidence 4556666666665678999999999999999999999999999986 389999998761
Q ss_pred --hhHHHHHhcCcccccEEEEEecCCceeeecC---CCCCHHHHHHHHHhhc
Q 010804 95 --ANKELASQYEIRGFPTIKILRNGGKTIQEYK---GPREADGIVEYLKKQS 141 (500)
Q Consensus 95 --~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~---g~~~~~~l~~~i~~~~ 141 (500)
....++++|++.++|++++++.+|+.. ++. |..+.+.+.+++.+.+
T Consensus 85 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 85 NDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp ECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred ECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 123399999999999999998777887 899 9999999999998764
No 210
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.47 E-value=4.8e-13 Score=114.04 Aligned_cols=109 Identities=24% Similarity=0.419 Sum_probs=92.1
Q ss_pred CceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhc-------
Q 010804 31 EFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQY------- 103 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~------- 103 (500)
-.+..++.+.+.....++++++|.||++||++|+...|.+.++++++.+.+ +.++.|+++.... .++++
T Consensus 17 ~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--v~~v~v~~d~~~~--~~~~~~~~~~~~ 92 (165)
T 3or5_A 17 FSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRG--FTFVGIAVNEQLP--NVKNYMKTQGII 92 (165)
T ss_dssp CEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTT--EEEEEEECSCCHH--HHHHHHHHHTCC
T ss_pred ceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCCCHH--HHHHHHHHcCCC
Confidence 345667777777666688999999999999999999999999999998643 8999999887554 55554
Q ss_pred --------------------CcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 104 --------------------EIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 104 --------------------~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
++.++|++++++.+|+....+.|..+.+.+.++|.+.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 93 YPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp SCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred CceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8999999999988889889999999999999999988753
No 211
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.46 E-value=7.2e-14 Score=104.63 Aligned_cols=82 Identities=21% Similarity=0.392 Sum_probs=73.3
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCCCCC
Q 010804 50 FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPRE 129 (500)
Q Consensus 50 ~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~ 129 (500)
..++.||++||++|+.+.|.+.++++++.+. +.+..+|++.++. ++++|+|.++|++++ +| +. ++.|..+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~~~--~~~~~~v~~~Pt~~~--~G-~~--~~~G~~~ 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK---IDVEKIDIMVDRE--KAIEYGLMAVPAIAI--NG-VV--RFVGAPS 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS---CCEEEECTTTCGG--GGGGTCSSCSSEEEE--TT-TE--EEECSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC---eEEEEEECCCCHH--HHHhCCceeeCEEEE--CC-EE--EEccCCC
Confidence 3589999999999999999999999998754 8999999999888 999999999999998 44 54 8899989
Q ss_pred HHHHHHHHHhhc
Q 010804 130 ADGIVEYLKKQS 141 (500)
Q Consensus 130 ~~~l~~~i~~~~ 141 (500)
.+.+.+++.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 212
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.46 E-value=3e-13 Score=112.51 Aligned_cols=103 Identities=25% Similarity=0.461 Sum_probs=85.4
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------- 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 93 (500)
+..++.+.+...- ++++++|.||++||++|+.+.|.+.++++++... ++.++.|+++.
T Consensus 20 l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (145)
T 3erw_A 20 MKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQNQQVVEDFIKANKLTF 96 (145)
T ss_dssp EECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSSCHHHHHHHHHHTTCCS
T ss_pred eecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC--CEEEEEEEccCCcCCHHHHHHHHHHcCCce
Confidence 4445555554444 8899999999999999999999999999998743 38999999865
Q ss_pred ----hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHH
Q 010804 94 ----EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLK 138 (500)
Q Consensus 94 ----~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 138 (500)
+....++++|++.++|++++++.+|+....+.|..+.+.+.++|+
T Consensus 97 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 97 PIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred eEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 222349999999999999999878888899999999999998873
No 213
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.45 E-value=6.1e-14 Score=109.32 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=70.8
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC--CCCCCCCCcCcceEEEEEcCCCceEEecCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN--DIPGDTFEVQGYPTVFFRSASGKTVPYEGDR 469 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~ 469 (500)
..+.++|+||++||++|+.+.+.+............+.++++|++.+ .....++++.++||+++|..|+++.++.|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 45689999999999999999864433211110001367888898887 4567779999999999999776688999999
Q ss_pred CHHHHHHHHHhhcCC
Q 010804 470 TKEDIVDFIENNRDK 484 (500)
Q Consensus 470 ~~~~l~~~i~~~~~~ 484 (500)
..+.+.+||++.+.+
T Consensus 97 ~~~~f~~~L~~~l~~ 111 (116)
T 3dml_A 97 GEDFFWPMLARLIGQ 111 (116)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999987654
No 214
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.45 E-value=1.9e-13 Score=114.99 Aligned_cols=96 Identities=24% Similarity=0.439 Sum_probs=80.1
Q ss_pred hhhccCCeEEEEEE-CCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChhh---------hHHHHHhcCccccc
Q 010804 43 DTVSKHNFIVVEFY-APWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEEA---------NKELASQYEIRGFP 109 (500)
Q Consensus 43 ~~~~~~~~~lv~f~-~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~---------~~~~~~~~~i~~~P 109 (500)
....++++++|+|| ++||++|+.+.|.+ .++.+.+... +.++.+|++... ..+++++|+|.++|
T Consensus 42 ~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~---~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~P 118 (154)
T 2ju5_A 42 HSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVH---LHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFP 118 (154)
T ss_dssp HHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSS
T ss_pred HHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCc---EEEEEecCccccCCChhhHhhHHHHHHHcCCCCCC
Confidence 33357899999999 99999999999999 7776665333 899999997643 33499999999999
Q ss_pred EEEEEecCCceeeecCCCC--CHHHHHHHHHhhcC
Q 010804 110 TIKILRNGGKTIQEYKGPR--EADGIVEYLKKQSG 142 (500)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 142 (500)
++++++.+|+.+.++ |.. +.+.+.++|.+.+.
T Consensus 119 t~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 119 ELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp EEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999997777888888 988 89999999987654
No 215
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.45 E-value=7.9e-13 Score=110.35 Aligned_cols=106 Identities=11% Similarity=0.218 Sum_probs=90.7
Q ss_pred EEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh--------------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE-------------------- 93 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------------------- 93 (500)
..++.+.+.....++++++|.||++||++|+...|.+.++++++.+. +.++.|+++.
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 46677778777778899999999999999999999999999999764 8888888653
Q ss_pred -----hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 94 -----EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 94 -----~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+....++++|+|.++|++++++.+|+...++.|..+.+.+.++|.+.+.
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 2223499999999999999998777888999999999999999988764
No 216
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.45 E-value=2.3e-13 Score=136.26 Aligned_cols=113 Identities=26% Similarity=0.436 Sum_probs=97.8
Q ss_pred CCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCC-CCceEEEEEeCCC--CCCCCCCCCcCcc
Q 010804 374 NEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATA--NDIPGDTFEVQGY 450 (500)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~-~~~~~~~~id~~~--~~~~~~~~~i~~~ 450 (500)
...+..+++++|+..+.+.+++++|+||++||++|+.+.|.|.+++..+++ ..++.|+.||++. +..++++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 346999999999999977889999999999999999999999999999864 3469999999954 7778888999999
Q ss_pred eEEEEEcCCCc----eEEecCCCCHHHHHHHHHhhcCCCC
Q 010804 451 PTVFFRSASGK----TVPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 451 P~~~~~~~~~~----~~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
|++++|++|.+ ...+.|..+.+.|.++|.+.+.+..
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999986432 4567788999999999999887643
No 217
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.44 E-value=1.1e-13 Score=111.53 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=85.4
Q ss_pred eEEEeccchhhhhhc-CCCeEEEEEECC-------CChhHhhhhHHHHHHHHHcCCCCceEEEEEeC-------CCCCCC
Q 010804 377 VKVLVADSLQDMVFN-SGKNVLLEFYAP-------WCGHCKKLAPILDEVAVSYQNDADVVIAKFDA-------TANDIP 441 (500)
Q Consensus 377 ~~~l~~~~~~~~~~~-~~~~~~v~f~~~-------~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~-------~~~~~~ 441 (500)
+...+.++|.+.+.+ .+++++|+||++ ||++|+.+.|.|.+++..+.+ ++.|+.+|+ +.+...
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHH
Confidence 556788899988865 589999999999 999999999999999998865 699999999 677777
Q ss_pred CCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHh
Q 010804 442 GDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIEN 480 (500)
Q Consensus 442 ~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 480 (500)
.++|++.++|++++|.++++...+.| .+.+.|.+||++
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 77899999999999977555444444 678899999875
No 218
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.44 E-value=9.5e-15 Score=119.33 Aligned_cols=109 Identities=25% Similarity=0.469 Sum_probs=93.2
Q ss_pred CCCeEEE-eccchhhhhhc---CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCc
Q 010804 374 NEPVKVL-VADSLQDMVFN---SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQG 449 (500)
Q Consensus 374 ~~~~~~l-~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~ 449 (500)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+..++++|++.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 3456667 56889988854 58899999999999999999999999999886 59999999999998988899999
Q ss_pred ceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCC
Q 010804 450 YPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 450 ~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
+|++++|+.|..+.++.| .+.++|.++|++.++...
T Consensus 90 ~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~~ 125 (130)
T 1wmj_A 90 MPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGATA 125 (130)
T ss_dssp SCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSSC
T ss_pred cceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhccC
Confidence 999999976655667778 688999999999887654
No 219
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.44 E-value=1.2e-13 Score=103.31 Aligned_cols=82 Identities=16% Similarity=0.372 Sum_probs=73.7
Q ss_pred eEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHH
Q 010804 395 NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDI 474 (500)
Q Consensus 395 ~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l 474 (500)
..+++||++||++|+.+.|.+.+++..+++ ++.++.+|++.+....+++++.++|++++ +++. ++.|..+.+++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~---~G~~-~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI---NGVV-RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE---TTTE-EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE---CCEE-EEccCCCHHHH
Confidence 468899999999999999999999999875 69999999999999999999999999988 4455 88898899999
Q ss_pred HHHHHhhc
Q 010804 475 VDFIENNR 482 (500)
Q Consensus 475 ~~~i~~~~ 482 (500)
.++|++.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998865
No 220
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.44 E-value=7.4e-14 Score=113.96 Aligned_cols=105 Identities=20% Similarity=0.420 Sum_probs=86.6
Q ss_pred EEeccchhhhhh---cCCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCC--CCCCCCCCCcCcc
Q 010804 379 VLVADSLQDMVF---NSGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATA--NDIPGDTFEVQGY 450 (500)
Q Consensus 379 ~l~~~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~--~~~~~~~~~i~~~ 450 (500)
.++..+|.+.+. ..+++++|+||++||++|+.+.|.+ ..+...++. ++.++.+|++. +..++++|++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCCC
Confidence 357788887773 3578999999999999999999998 677766654 68899999984 4566778999999
Q ss_pred eEEEEEcCCCc-eEEecCCCCHHHHHHHHHhhcCCC
Q 010804 451 PTVFFRSASGK-TVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 451 P~~~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
|++++|+++++ +.++.|..+.++|.++|++..+.+
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 99999965555 558889999999999999988765
No 221
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.43 E-value=7.8e-13 Score=112.58 Aligned_cols=107 Identities=19% Similarity=0.324 Sum_probs=90.0
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEec--------------------
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA-------------------- 91 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~-------------------- 91 (500)
.+..++.+.+.....++++++|+||++||++|+...|.+.+++++++..+ +.+..|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS--ANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT--SEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC--cEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 56778888888877789999999999999999999999999999886543 55555543
Q ss_pred --------ChhhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 92 --------NEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 92 --------~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+.... ++++|+|.++|++++++.+|+...++.|..+.+.+.++|.+.+.
T Consensus 100 ~~~~~~~~d~~~~--~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGT--IAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCH--HHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchH--HHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 22334 99999999999999998778888999999999999999998765
No 222
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.42 E-value=1.9e-12 Score=108.60 Aligned_cols=109 Identities=18% Similarity=0.371 Sum_probs=89.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA----------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 95 (500)
+..++.+.+...-.++++++|.||++||++|+...|.+.++++++.+.+ +.++.|+++..+
T Consensus 11 l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 88 (151)
T 2f9s_A 11 LEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQG--VEIVAVNVGESKIAVHNFMKSYGVNFPVV 88 (151)
T ss_dssp EECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred eEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCCCHHHHHHHHHHcCCCceEE
Confidence 3344444444444478999999999999999999999999999997633 888888886532
Q ss_pred ---hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 96 ---NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 96 ---~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
...++++|+|.++|++++++.+|+....+.|..+.+.+.++|.+.+..
T Consensus 89 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 89 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp EETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred ECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 224899999999999999987789889999999999999999988754
No 223
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.42 E-value=2.3e-14 Score=139.46 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=85.0
Q ss_pred CCCCeEEEeccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCC------ceEEEEEeCCCCCCCCCCC
Q 010804 373 NNEPVKVLVADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDA------DVVIAKFDATANDIPGDTF 445 (500)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~------~~~~~~id~~~~~~~~~~~ 445 (500)
..+.+..++.++|+..+.. .+++++|+||++||++|+.+.|.|.+++..+.... ++.|+.||++.+..++++|
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 3466999999999998853 35799999999999999999999999999986432 4999999999999999999
Q ss_pred CcCcceEEEEEcCCCc--eEEecCCCCHHHH
Q 010804 446 EVQGYPTVFFRSASGK--TVPYEGDRTKEDI 474 (500)
Q Consensus 446 ~i~~~P~~~~~~~~~~--~~~~~g~~~~~~l 474 (500)
+|.++|++++|.+|+. +.+|.|..+.+.|
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSLEHV 131 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCEEEE
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCHHHH
Confidence 9999999999965543 5567776554443
No 224
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.41 E-value=3.5e-14 Score=110.71 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=70.4
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCC
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKG 126 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g 126 (500)
+...++|+||++||++|+.+.+.+....+.... +..+.+..||.+.+...+++.+++|.++||++||++ |+.+.+..|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~-G~ev~Ri~G 94 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAG-DVESGRLEG 94 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEET-TEEEEEEEC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCchhHHHHCCCCCCCEEEEEEC-CEEEeeecC
Confidence 456899999999999999997654433221100 011567788887764333899999999999999995 588899999
Q ss_pred CCCHHHHHHHHHhhc
Q 010804 127 PREADGIVEYLKKQS 141 (500)
Q Consensus 127 ~~~~~~l~~~i~~~~ 141 (500)
....+.+.+|+.+.+
T Consensus 95 ~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 95 YPGEDFFWPMLARLI 109 (116)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999998765
No 225
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.41 E-value=2e-12 Score=108.39 Aligned_cols=105 Identities=17% Similarity=0.283 Sum_probs=86.6
Q ss_pred CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh---------------------
Q 010804 37 DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------- 95 (500)
Q Consensus 37 ~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------- 95 (500)
+.+.+...-.++++++|.||++||++|+...|.+.++++++++. .+.++.|+++...
T Consensus 13 ~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 90 (151)
T 3raz_A 13 DNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG--SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGA 90 (151)
T ss_dssp TCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT--TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCS
T ss_pred CCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCChHHHHHHHHHcCCCCceEecCcc
Confidence 34444444447899999999999999999999999999999643 3899999986321
Q ss_pred -hHHHHHhcC--cccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 96 -NKELASQYE--IRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 96 -~~~~~~~~~--i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
...++++|+ +.++|++++++.+|+...++.|..+.+.+.++|.+....
T Consensus 91 ~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 91 NSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp CHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred chHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 234788899 999999999988889999999999999999999987654
No 226
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.40 E-value=1.7e-13 Score=112.25 Aligned_cols=97 Identities=23% Similarity=0.398 Sum_probs=80.9
Q ss_pred cchhhhhh---cCCCeEEEEEECCCChhHhhhhHHHH--HHHHHcCCCCceEEEEEeC---CCCCCCCCCCCc---Ccce
Q 010804 383 DSLQDMVF---NSGKNVLLEFYAPWCGHCKKLAPILD--EVAVSYQNDADVVIAKFDA---TANDIPGDTFEV---QGYP 451 (500)
Q Consensus 383 ~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~~--~~~~~~~~~~~~~~~~id~---~~~~~~~~~~~i---~~~P 451 (500)
+++++.+. ..+++++|+||++||++|+.+.|.|. +++..++. ++.++.+|+ +.+..+.++|++ .++|
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~P 93 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIP 93 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccc
Confidence 44555442 46899999999999999999999999 89888854 699999999 777777888999 9999
Q ss_pred EEEEEcCCCc-eEEecC-------CCCHHHHHHHHHhh
Q 010804 452 TVFFRSASGK-TVPYEG-------DRTKEDIVDFIENN 481 (500)
Q Consensus 452 ~~~~~~~~~~-~~~~~g-------~~~~~~l~~~i~~~ 481 (500)
++++|+++|+ +.++.| ..+.+++.+||++.
T Consensus 94 t~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 94 AVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 9999955555 557777 68999999999875
No 227
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.40 E-value=7.3e-14 Score=108.83 Aligned_cols=79 Identities=22% Similarity=0.373 Sum_probs=63.9
Q ss_pred ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC------hhhhHHHHHhcCcccccEEEEEecCCc
Q 010804 46 SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN------EEANKELASQYEIRGFPTIKILRNGGK 119 (500)
Q Consensus 46 ~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~------~~~~~~~~~~~~i~~~P~~~~~~~~~~ 119 (500)
..++.++|.||++||++|+.+.|.|.++++.+. .|||+ ..+. +|++|+|+++||+++ +| +
T Consensus 10 ~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---------~v~~~~~~~~~~~~~--l~~~~~V~~~PT~~i--~G-~ 75 (106)
T 3kp8_A 10 HLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQ--ECTEAGITSYPTWII--NG-R 75 (106)
T ss_dssp HHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCTTCTTSCCCH--HHHHTTCCSSSEEEE--TT-E
T ss_pred hcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---------EEEEecccccchhHH--HHHHcCCeEeCEEEE--CC-E
Confidence 345667899999999999999999999886652 45665 3444 999999999999877 44 4
Q ss_pred eeeecCCCCCHHHHHHHHHhhc
Q 010804 120 TIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 120 ~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
.|.|..+.+.|.+|+....
T Consensus 76 ---~~~G~~~~~~l~~~~~~~~ 94 (106)
T 3kp8_A 76 ---TYTGVRSLEALAVASGYPL 94 (106)
T ss_dssp ---EEESCCCHHHHHHHHTCCC
T ss_pred ---EecCCCCHHHHHHHhCCcc
Confidence 4899999999999986544
No 228
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.40 E-value=1.3e-13 Score=112.98 Aligned_cols=99 Identities=25% Similarity=0.480 Sum_probs=81.1
Q ss_pred eccchhhhhhc-CCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCC----CCCCCCCCCcCcceE
Q 010804 381 VADSLQDMVFN-SGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATA----NDIPGDTFEVQGYPT 452 (500)
Q Consensus 381 ~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~----~~~~~~~~~i~~~P~ 452 (500)
+.+.+...+.+ .+++++|+||++||++|+.+.+.+ .+++..++ ++.++.+|++. +..++++|++.++|+
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt 94 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDAQDVALLKHLNVLGLPT 94 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCHHHHHHHHHTTCCSSSE
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcchHHHHHHHcCCCCCCE
Confidence 45666666643 488999999999999999999998 88888876 49999999954 345567799999999
Q ss_pred EEEEcCCCce---EEecCCCCHHHHHHHHHhhc
Q 010804 453 VFFRSASGKT---VPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 453 ~~~~~~~~~~---~~~~g~~~~~~l~~~i~~~~ 482 (500)
+++|+.+|++ .++.|..+.++|.++|++.-
T Consensus 95 ~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 95 ILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred EEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 9999666665 47899999999999998653
No 229
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.38 E-value=2.7e-12 Score=107.66 Aligned_cols=109 Identities=17% Similarity=0.387 Sum_probs=89.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN---------------- 96 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---------------- 96 (500)
+..++.+.+...-.++++++|.||++||++|+...+.+.++++++.+. .+.++.|+++....
T Consensus 15 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 92 (152)
T 2lja_A 15 YPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKKAWENMVTKDQLKGIQL 92 (152)
T ss_dssp EEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHHHHHHHHHHHTCCSEEE
T ss_pred eecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHHHHHHHHHhcCCCCcee
Confidence 444555555444447889999999999999999999999999998753 38899998877541
Q ss_pred -----HHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCC
Q 010804 97 -----KELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 97 -----~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 143 (500)
..++++|+|.++|++++++.+|+....+.|..+.+.|.++|.+....
T Consensus 93 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 93 HMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp ECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred ecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 14899999999999999997778888999999999999999987754
No 230
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.37 E-value=4.8e-12 Score=107.15 Aligned_cols=105 Identities=18% Similarity=0.286 Sum_probs=87.1
Q ss_pred cCccChhhhhccCCeEEEEEECCCChhhhh-hhHHHHHHHHHhcCCCCCeEEEEEecC----------------------
Q 010804 36 LDHSNFSDTVSKHNFIVVEFYAPWCGHCKK-LAPEYEKAASELSSHDPPVVLAKVDAN---------------------- 92 (500)
Q Consensus 36 l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~-~~~~~~~~~~~~~~~~~~v~~~~vd~~---------------------- 92 (500)
++.+.+...-.++++++|.||++||++|+. ..|.+.++++++.+.+ +.++.|+++
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~--v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQ--VQVIGLHSVFEHHDVMTPEALKVFIDEFGIK 95 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT--EEEEEEECCCSCGGGSCHHHHHHHHHHTTCC
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCC--cEEEEEeccccccccCCHHHHHHHHHHcCCC
Confidence 555656555557899999999999999999 5999999999997654 888888863
Q ss_pred ----hhhhHH------HHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 93 ----EEANKE------LASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 93 ----~~~~~~------~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
.+.... ++++|++.++|++++++.+|+...++.|..+.+.+.+.|.+.+.
T Consensus 96 ~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 96 FPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 111122 88999999999999999888999999999999999999998775
No 231
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.36 E-value=7.1e-12 Score=105.88 Aligned_cols=102 Identities=15% Similarity=0.242 Sum_probs=84.7
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhh-hHHHHHHHHHhcCCCCCeEEEEEecCh------------------------
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKL-APEYEKAASELSSHDPPVVLAKVDANE------------------------ 93 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~-~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------------ 93 (500)
+.+...-.++++++|.||++||++|+.. .|.+.++++++.+.+ +.++.|+++.
T Consensus 19 ~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~--v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (158)
T 3eyt_A 19 TDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDK--VAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPV 96 (158)
T ss_dssp SCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT--EEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCE
T ss_pred CccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCC--EEEEEEEecccccccCCHHHHHHHHHHcCCCceE
Confidence 4455544578999999999999999996 999999999997543 8888888641
Q ss_pred --hhhH-----HHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 94 --EANK-----ELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 94 --~~~~-----~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+... .+++.|++.++|++++++.+|+...++.|..+.+.+.+.|.+.+.
T Consensus 97 ~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 97 GVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp EEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 0111 389999999999999998888998999999999999999998775
No 232
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.36 E-value=2.2e-11 Score=111.33 Aligned_cols=197 Identities=18% Similarity=0.261 Sum_probs=145.2
Q ss_pred CceEEcC-ccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccccc
Q 010804 31 EFVLTLD-HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFP 109 (500)
Q Consensus 31 ~~v~~l~-~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P 109 (500)
..+..|+ .++++.++..++.++|.|+++|| ....+.|.++|..+++. +.|+.+. +.. +++++++.+ |
T Consensus 6 P~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~---~~F~~~~---~~~--v~~~~~~~~-p 73 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDN---YRFAHTN---VES--LVNEYDDNG-E 73 (252)
T ss_dssp CCEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTT---SCEEEEC---CHH--HHHHHCSSS-E
T ss_pred CCceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccC---cEEEEEC---hHH--HHHHhCCCC-C
Confidence 3467774 56788888888999999999874 45678999999999765 8898884 233 999999997 9
Q ss_pred EEEEEecCC------ceeeec-CCCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCC-c-----hh
Q 010804 110 TIKILRNGG------KTIQEY-KGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFS-G-----EE 176 (500)
Q Consensus 110 ~~~~~~~~~------~~~~~~-~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~-~-----~~ 176 (500)
++++|+++. +....| .|..+.+.|.+||....-|.+.++ |.+.+..+ .+.+..+++++.+.. . ..
T Consensus 74 ~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~-t~~n~~~~-~~~~~~v~~~~~~~~~~~~~~~~~ 151 (252)
T 2h8l_A 74 GIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHM-TEDNKDLI-QGKDLLIAYYDVDYEKNAKGSNYW 151 (252)
T ss_dssp EEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEE-CTTTHHHH-SSSSEEEEEECCBTTTBHHHHHHH
T ss_pred cEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeec-ccccHhhh-cCCCeEEEEeecchhhcchhHHHH
Confidence 999999631 234578 999999999999999999999999 55556555 344544444433222 1 24
Q ss_pred HHHHHHHHHHhcCC---ceEEEeeccc---ccCCCCCCC-----CCCeEEEeccCCCcccccCCCCHHH--HHHHHHHcc
Q 010804 177 FENYTALAEKLRSD---YEFGHTQNAK---LLPRGESSV-----TGPVVRLFKPFDELFVDFKDFKVDA--LEKFVEESS 243 (500)
Q Consensus 177 ~~~f~~~a~~~~~~---~~f~~~~~~~---~~~~~~~~~-----~~p~~~~~~~~~~~~~~~~~~~~~~--l~~~i~~~~ 243 (500)
...+.++|+.+++. +.|+++.... +... +++ ..|.++++.....+..+.++++.+. |..|++...
T Consensus 152 ~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~--fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 152 RNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSD--FGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGG--GTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCceEEEEEEchHHHHHHHHH--cCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHH
Confidence 56788899999877 9999998443 3334 455 3499999865344445667888888 999997654
No 233
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.05 E-value=5.9e-14 Score=114.57 Aligned_cols=95 Identities=18% Similarity=0.332 Sum_probs=80.0
Q ss_pred cCCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCC--CCCCCCCCCCcCcceEEEEEc-CCCc---
Q 010804 391 NSGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDAT--ANDIPGDTFEVQGYPTVFFRS-ASGK--- 461 (500)
Q Consensus 391 ~~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~--~~~~~~~~~~i~~~P~~~~~~-~~~~--- 461 (500)
..+++++|+||++||++|+.+.|.+ .+++..++. ++.++.+|++ .+..++++|++.++|++++|+ .+++
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 5678999999999999999999999 888887765 5889999994 557778889999999999995 2344
Q ss_pred eEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 462 TVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 462 ~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
+.++.|..+.+.|.++|++.+++..+
T Consensus 95 ~~~~~G~~~~~~l~~~l~~~~~~~~~ 120 (130)
T 2lst_A 95 VGRLFGSRPRAEFLKELRQVCVKGGA 120 (130)
Confidence 45788999999999999998876544
No 234
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=4.3e-12 Score=106.58 Aligned_cols=106 Identities=14% Similarity=0.319 Sum_probs=87.0
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC--------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN-------------------- 92 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~-------------------- 92 (500)
+..++.+.+...-.++++++|.||++||++|+...+.+.++++++.+.+ +.++.|+.+
T Consensus 13 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
T 2l5o_A 13 LPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKN--FQVLAVAQPIDPIESVRQYVKDYGLPFTV 90 (153)
T ss_dssp EECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTT--EEEEEEECTTSCHHHHHHHHHHTTCCSEE
T ss_pred eecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC--eEEEEEecCCCCHHHHHHHHHHcCCCceE
Confidence 4445555555554578999999999999999999999999999998643 777766632
Q ss_pred ---hhhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 93 ---EEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 93 ---~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
.... +++.|+|.++|++++++.+|+....+.|..+.+.+.++|.+.+.
T Consensus 91 ~~d~~~~--~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 91 MYDADKA--VGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp EECSSCH--HHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred EcCchHH--HHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 2334 99999999999999998878888899999999999999998764
No 235
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.36 E-value=4.4e-12 Score=105.79 Aligned_cols=105 Identities=18% Similarity=0.361 Sum_probs=83.0
Q ss_pred eEEcCccChhhh--hccCCeEEEEEECCCChhhhhhhHHHHHHHHHh-cCCCCCeEEEEEecChhh--------------
Q 010804 33 VLTLDHSNFSDT--VSKHNFIVVEFYAPWCGHCKKLAPEYEKAASEL-SSHDPPVVLAKVDANEEA-------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~--~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~-~~~~~~v~~~~vd~~~~~-------------- 95 (500)
+..++.+.+... -.++++++|.||++||++|+...|.+.++++++ .+.+ +.++.|+++...
T Consensus 16 l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~~~ 93 (148)
T 3fkf_A 16 LPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKN--FAMLGISLDIDREAWETAIKKDTLSW 93 (148)
T ss_dssp EEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTT--EEEEEEECCSCHHHHHHHHHHTTCCS
T ss_pred eeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCC--eEEEEEECCCCHHHHHHHHHHcCCCc
Confidence 444555554444 447899999999999999999999999999998 5433 888888877643
Q ss_pred ---------hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 96 ---------NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 96 ---------~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
...++++|++.++|++++++.+|+....+. +.+.+.+++.+.+.
T Consensus 94 ~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 94 DQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp EEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred eEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 234999999999999999987778766665 88888888887663
No 236
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.35 E-value=7.9e-12 Score=102.65 Aligned_cols=104 Identities=24% Similarity=0.459 Sum_probs=83.0
Q ss_pred EEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh--------------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE-------------------- 93 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------------------- 93 (500)
..++.+.+...-.++++++|+||++||++|+...+.+.++++++.. .+.+..+++..
T Consensus 8 ~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~ 84 (138)
T 4evm_A 8 MGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD---DYVVLTVVSPGHKGEQSEADFKNWYKGLDYK 84 (138)
T ss_dssp EBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT---TEEEEEEECTTSTTCCCHHHHHHHHTTCCCT
T ss_pred ECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC---CcEEEEEEcCCCCchhhHHHHHHHHhhcCCC
Confidence 3444444444444789999999999999999999999999998544 38888885422
Q ss_pred ------hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 94 ------EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 94 ------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
+....++++|++.++|++++++.+|+....+.|..+.+.+.++|.+.
T Consensus 85 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 85 NLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 11223999999999999999987889889999999999999998763
No 237
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.35 E-value=6.7e-12 Score=105.52 Aligned_cols=106 Identities=19% Similarity=0.384 Sum_probs=86.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC--h-----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN--E----------------- 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~--~----------------- 93 (500)
+..++.+.+...-.+ ++++|.||++||++|+...+.+.++++++ . +.++.|+++ .
T Consensus 16 l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~---v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 89 (154)
T 3ia1_A 16 LLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G---VPFYVISREPRDTREVVLEYMKTYPRFIP 89 (154)
T ss_dssp EECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C---CCEEEEECCTTCCHHHHHHHHTTCTTEEE
T ss_pred EECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C---CeEEEEeCCCcccHHHHHHHHHHcCCCcc
Confidence 444555444444335 89999999999999999999999999999 2 778888881 0
Q ss_pred ------hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcCCC
Q 010804 94 ------EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA 144 (500)
Q Consensus 94 ------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 144 (500)
+....++++|++.++|++++++.+|+....+.|..+.+.|.++|.+.....
T Consensus 90 ~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 90 LLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp CBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred cccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 123349999999999999999888899999999999999999999988653
No 238
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.34 E-value=2.4e-13 Score=115.45 Aligned_cols=99 Identities=19% Similarity=0.334 Sum_probs=78.0
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCc--ccccEEEEEec
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEI--RGFPTIKILRN 116 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i--~~~P~~~~~~~ 116 (500)
++++....++++++|+||++||++|+.+.|.+.++++..... +.|+.||++..+. .++.++++ .++|++++|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~-~~~~~~~~~~~~~Pt~~~~d~ 112 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEE-PKDEDFSPDGGYIPRILFLDP 112 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGS-CSCGGGCTTCSCSSEEEEECT
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCch-HHHHHhcccCCcCCeEEEECC
Confidence 567777788999999999999999999999999987665432 4566677665432 15677887 66999999976
Q ss_pred CCceeeecCCC----------CCHHHHHHHHHhhc
Q 010804 117 GGKTIQEYKGP----------READGIVEYLKKQS 141 (500)
Q Consensus 117 ~~~~~~~~~g~----------~~~~~l~~~i~~~~ 141 (500)
+|+.+.++.|. .+.+.|.++|.+.+
T Consensus 113 ~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 113 SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 66887888884 78899999998765
No 239
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.34 E-value=1.2e-12 Score=110.71 Aligned_cols=86 Identities=21% Similarity=0.346 Sum_probs=71.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHH-H--HHHHHHhcCCCCCeEEEEEecChhhhHHHHHhc------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPE-Y--EKAASELSSHDPPVVLAKVDANEEANKELASQY------ 103 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~-~--~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~------ 103 (500)
....+++.|+.+..+++++||.||++||++|+.+.+. | .++++.+++. ++++.||.+..+. +.+.|
T Consensus 24 W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~--l~~~y~~~~q~ 98 (173)
T 3ira_A 24 WYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPD--IDNIYMTVCQI 98 (173)
T ss_dssp CBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHH--HHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCc--HHHHHHHHHHH
Confidence 4456678899999999999999999999999999883 3 4677777654 8999999987776 88888
Q ss_pred --CcccccEEEEEecCCceeee
Q 010804 104 --EIRGFPTIKILRNGGKTIQE 123 (500)
Q Consensus 104 --~i~~~P~~~~~~~~~~~~~~ 123 (500)
|+.++|+++|++++|+.+..
T Consensus 99 ~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 99 ILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp HHSCCCSSEEEEECTTSCEEEE
T ss_pred HcCCCCCcceeeECCCCCceee
Confidence 99999999999977776543
No 240
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.34 E-value=9.9e-12 Score=104.99 Aligned_cols=107 Identities=23% Similarity=0.446 Sum_probs=88.4
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------- 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 93 (500)
+..++.+.+...-.++++++|.||++||++|+...+.+.++++++.+. .+.++.|+++.
T Consensus 26 l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~ 103 (158)
T 3hdc_A 26 LPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEKRFPEKYRRAPVSFNFLSDA 103 (158)
T ss_dssp EECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSSSCCGGGGGCCCSCEEEECT
T ss_pred eEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCHHHHHHHHHcCCCceEEECc
Confidence 455666666655567899999999999999999999999999999743 39999999876
Q ss_pred hhhHHHHHhcCcccccEEEEEecCCceeeecCCC--CCHHHHHHHHHhhcCC
Q 010804 94 EANKELASQYEIRGFPTIKILRNGGKTIQEYKGP--READGIVEYLKKQSGP 143 (500)
Q Consensus 94 ~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~--~~~~~l~~~i~~~~~~ 143 (500)
... ++++|++.++|++++++.+|+...++.|. .+..++.+.+.+...+
T Consensus 104 ~~~--~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 104 TGQ--VQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp TSH--HHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred hHH--HHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 344 99999999999999998888999999996 5678888888776654
No 241
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.34 E-value=1.2e-11 Score=103.67 Aligned_cols=105 Identities=15% Similarity=0.394 Sum_probs=85.5
Q ss_pred CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh--------------------
Q 010804 37 DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN-------------------- 96 (500)
Q Consensus 37 ~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-------------------- 96 (500)
+.+.+...-.++++++|.||++||++|+...+.+.++++++.+.+ +.++.|+++.+..
T Consensus 17 ~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~ 94 (152)
T 3gl3_A 17 KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPK 94 (152)
T ss_dssp SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSHHHHHHHHHHSCCCSEEEECTT
T ss_pred CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC--eEEEEEECCCCHHHHHHHHHHcCCCCceeECCc
Confidence 444444444578899999999999999999999999999998754 8888888775441
Q ss_pred HHHHHhcCcccccEEEEEecCCceeeecCCC--CCHHHHHHHHHhhcCC
Q 010804 97 KELASQYEIRGFPTIKILRNGGKTIQEYKGP--READGIVEYLKKQSGP 143 (500)
Q Consensus 97 ~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~--~~~~~l~~~i~~~~~~ 143 (500)
..+++.|++.++|++++++.+|+...++.|. .+.+.|.++|.+....
T Consensus 95 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 95 GQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred chhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 1388899999999999998888988889886 4568999999988754
No 242
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.33 E-value=1.1e-12 Score=112.73 Aligned_cols=103 Identities=16% Similarity=0.198 Sum_probs=81.0
Q ss_pred EEeccchhhhhh---cCCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCCCCCC-----------
Q 010804 379 VLVADSLQDMVF---NSGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATANDIP----------- 441 (500)
Q Consensus 379 ~l~~~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~~~~~----------- 441 (500)
.++..+|++.+. ..+++++|+||++||++|+.+.+.+ ..+...++. ++.++.+|++.+...
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcch
Confidence 456677777663 5689999999999999999975443 555555543 699999999987654
Q ss_pred ---------------CCCCCcCcceEEEEEcCCCc-eEEecCCCC-HHHHHHHHHhhcC
Q 010804 442 ---------------GDTFEVQGYPTVFFRSASGK-TVPYEGDRT-KEDIVDFIENNRD 483 (500)
Q Consensus 442 ---------------~~~~~i~~~P~~~~~~~~~~-~~~~~g~~~-~~~l~~~i~~~~~ 483 (500)
.++|++.++|++++++++|+ +.++.|..+ .+++.++|++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 45689999999999966665 457889988 9999999998764
No 243
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.32 E-value=8e-13 Score=109.47 Aligned_cols=96 Identities=11% Similarity=0.099 Sum_probs=69.1
Q ss_pred ChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHH---HHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEec
Q 010804 40 NFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAA---SELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRN 116 (500)
Q Consensus 40 ~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~---~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~ 116 (500)
.++.+..++++++|+||++||++|+.+.|.+.+.. +..... +..+.||. .... ++.++++.++||++||+.
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~---fv~V~vD~-e~~~--~~~~~~v~~~PT~~f~~~ 109 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNK---FIMLNLMH-ETTD--KNLSPDGQYVPRIMFVDP 109 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHT---CEEEEESS-CCSC--GGGCTTCCCSSEEEEECT
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcC---eEEEEecC-Cchh--hHhhcCCCCCCEEEEECC
Confidence 35555678999999999999999999999988642 222212 55555542 2334 678999999999999997
Q ss_pred CCceeeecCCC-------CCH---HHHHHHHHhhc
Q 010804 117 GGKTIQEYKGP-------REA---DGIVEYLKKQS 141 (500)
Q Consensus 117 ~~~~~~~~~g~-------~~~---~~l~~~i~~~~ 141 (500)
+|+.+.+..|. +.. +.+++.+++.+
T Consensus 110 ~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 110 SLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 77888888887 444 45555555443
No 244
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.31 E-value=2.9e-13 Score=115.00 Aligned_cols=93 Identities=19% Similarity=0.372 Sum_probs=73.0
Q ss_pred cCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCC-CCCCCCc--CcceEEEEEcCCCc-eEEec
Q 010804 391 NSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDI-PGDTFEV--QGYPTVFFRSASGK-TVPYE 466 (500)
Q Consensus 391 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~i--~~~P~~~~~~~~~~-~~~~~ 466 (500)
..+++++|+||++||++|+.+.|.|.+++..... ++.|+.+|++.++. ....+.+ .++|++++|+.+++ +.++.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~ 121 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEII 121 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEe
Confidence 5689999999999999999999999997765543 35667777776655 5666777 67999999955555 44677
Q ss_pred CC----------CCHHHHHHHHHhhcCCC
Q 010804 467 GD----------RTKEDIVDFIENNRDKA 485 (500)
Q Consensus 467 g~----------~~~~~l~~~i~~~~~~~ 485 (500)
|. .+.++|.++|++.+...
T Consensus 122 G~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 122 NENGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp CTTSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCccchhcccCCHHHHHHHHHHHHHhc
Confidence 74 78999999999887653
No 245
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.31 E-value=1.6e-11 Score=102.95 Aligned_cols=105 Identities=21% Similarity=0.374 Sum_probs=80.2
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA----------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 95 (500)
+..++.+.+...-.++++++|.||++||++|+...|.+.++++++.+.+ +.++.|+++...
T Consensus 14 l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (152)
T 2lrn_A 14 GIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKG--FTIYGVSTDRREEDWKKAIEEDKSYWNQV 91 (152)
T ss_dssp EECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTT--EEEEEEECCSCHHHHHHHHHHHTCCSEEE
T ss_pred eEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCC--eEEEEEEccCCHHHHHHHHHHhCCCCeEE
Confidence 3344444444443478899999999999999999999999999997643 888999887621
Q ss_pred ------hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 96 ------NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 96 ------~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
...++++|+|.++|++++++.+|+...++. +.+.+.++|.+.+.
T Consensus 92 ~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 92 LLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp EECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred ecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 244999999999999999987778877763 34566666666543
No 246
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.31 E-value=4.6e-12 Score=105.70 Aligned_cols=106 Identities=13% Similarity=0.244 Sum_probs=85.8
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN---------------- 96 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---------------- 96 (500)
+..++.+.+...-.++++++|.||++||++|+...|.+.++++++.+.+ +.++.|+++....
T Consensus 16 l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 93 (148)
T 3hcz_A 16 MTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKG--IQVYAANIERKDEEWLKFIRSKKIGGWLN 93 (148)
T ss_dssp CBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGT--EEEEEEECCSSSHHHHHHHHHHTCTTSEE
T ss_pred EecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC--EEEEEEEecCCHHHHHHHHHHcCCCCceE
Confidence 4445555555555578999999999999999999999999999997643 8899998875432
Q ss_pred -------HHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 97 -------KELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 97 -------~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
..+++.|+|.++|++++++.+|+...++.|..+.+.+.+.+.+.
T Consensus 94 ~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 94 VRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp EECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred EeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 01889999999999999988889989999987777777777654
No 247
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.31 E-value=6.6e-12 Score=103.05 Aligned_cols=88 Identities=23% Similarity=0.444 Sum_probs=76.2
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----------------------CCCCCCCCCcCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA----------------------NDIPGDTFEVQG 449 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~----------------------~~~~~~~~~i~~ 449 (500)
.+++++|+||++||++|+...+.+.++...++ ++.++.++++. +..+.+.|++.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC
Confidence 46899999999999999999999999999987 58899999876 445566799999
Q ss_pred ceEEEEEcCCCceEEec---CCCCHHHHHHHHHhhc
Q 010804 450 YPTVFFRSASGKTVPYE---GDRTKEDIVDFIENNR 482 (500)
Q Consensus 450 ~P~~~~~~~~~~~~~~~---g~~~~~~l~~~i~~~~ 482 (500)
+|+++++++++++.++. |..+.++|.++|++.+
T Consensus 100 ~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 99999997777755888 9999999999998764
No 248
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.31 E-value=6.4e-12 Score=91.89 Aligned_cols=74 Identities=19% Similarity=0.393 Sum_probs=62.2
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCCCC-C
Q 010804 51 IVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPR-E 129 (500)
Q Consensus 51 ~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~-~ 129 (500)
..|.||++||++|+.+.|.+.++++.+... +.++.+| +.. ++++|+|.++|++++ + |+...+ |.. +
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~---~~~~~v~---~~~--~~~~~~v~~~Pt~~~--~-G~~~~~--G~~~~ 68 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID---AEFEKIK---EMD--QILEAGLTALPGLAV--D-GELKIM--GRVAS 68 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC---EEEEEEC---SHH--HHHHHTCSSSSCEEE--T-TEEEEC--SSCCC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc---eEEEEec---CHH--HHHHCCCCcCCEEEE--C-CEEEEc--CCCCC
Confidence 358999999999999999999999998653 8899998 344 999999999999998 4 465444 887 8
Q ss_pred HHHHHHHH
Q 010804 130 ADGIVEYL 137 (500)
Q Consensus 130 ~~~l~~~i 137 (500)
.+.|.+++
T Consensus 69 ~~~l~~~l 76 (77)
T 1ilo_A 69 KEEIKKIL 76 (77)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998875
No 249
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.31 E-value=2.2e-11 Score=102.36 Aligned_cols=108 Identities=18% Similarity=0.412 Sum_probs=86.6
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA----------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 95 (500)
+..++.+.+...-.++++++|.||++||++|+...+.+.++++++.+.+ +.++.|+++.+.
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 90 (154)
T 3kcm_A 13 LNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKP--FRMLCVSIDEGGKVAVEEFFRKTGFTLPV 90 (154)
T ss_dssp EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCTTHHHHHHHHHHHHCCCCCE
T ss_pred EEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC--eEEEEEEcCCcchHHHHHHHHHcCCCeeE
Confidence 4455555555555578999999999999999999999999999997633 888888887651
Q ss_pred ----hHHHHHhcCcccccEEEEEecCCceeeecCCCC--CHHHHHHHHHhhcC
Q 010804 96 ----NKELASQYEIRGFPTIKILRNGGKTIQEYKGPR--EADGIVEYLKKQSG 142 (500)
Q Consensus 96 ----~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 142 (500)
...+++.|++.++|++++++.+|+...++.|.. +.+.+.++|.+...
T Consensus 91 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 91 LLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp EECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred EecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 123888999999999999988889888999975 67799999987664
No 250
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.30 E-value=2.1e-11 Score=105.79 Aligned_cols=107 Identities=10% Similarity=0.280 Sum_probs=85.8
Q ss_pred eEEc--CccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCC----CCeEEEEEecCh-hhhHHHHHhc--
Q 010804 33 VLTL--DHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHD----PPVVLAKVDANE-EANKELASQY-- 103 (500)
Q Consensus 33 v~~l--~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~----~~v~~~~vd~~~-~~~~~~~~~~-- 103 (500)
+..+ +.+.+...-.+++++||.||++||++|+...|.+.++++++.+.+ +++.|+.|+++. ... .+++|
T Consensus 42 l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~--~~~~~~~ 119 (183)
T 3lwa_A 42 GDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRD--IAQDFVT 119 (183)
T ss_dssp EEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHH--HHHHHHH
T ss_pred ccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHH--HHHHHHH
Confidence 4455 555555555578999999999999999999999999999997653 234899999877 333 34443
Q ss_pred -----------------------CcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 104 -----------------------EIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 104 -----------------------~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
++.++|++++++.+|+....+.|..+.+.|.++|.+.+
T Consensus 120 ~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 120 DNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp HTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 57899999999888899899999999999999998765
No 251
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.30 E-value=8.5e-13 Score=101.19 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=79.8
Q ss_pred eEEE-eccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCC----CCCCCCcC-cc
Q 010804 377 VKVL-VADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDI----PGDTFEVQ-GY 450 (500)
Q Consensus 377 ~~~l-~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~----~~~~~~i~-~~ 450 (500)
..+| +.++|++++ +.+++++|+|+|.||++|+.+.|.|++++.. . ++.|+++|++++.. +.++++|+ ..
T Consensus 8 ~~~i~s~e~f~~ii-~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~s 82 (112)
T 3iv4_A 8 AIKLSSIDQFEQVI-EENKYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERDLSDYIAKKTNVKHES 82 (112)
T ss_dssp EEECCSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHHHHHHHHHHHTCCCCS
T ss_pred eeecCCHHHHHHHH-hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCchhhHHHHHHhCCccCC
Confidence 4555 567788877 4589999999999999999999999999874 2 69999999998855 67889999 49
Q ss_pred eEEEEEcCCCceEE-ecCCCCHHHHHHHH
Q 010804 451 PTVFFRSASGKTVP-YEGDRTKEDIVDFI 478 (500)
Q Consensus 451 P~~~~~~~~~~~~~-~~g~~~~~~l~~~i 478 (500)
|++++|.+|..+-+ -.+.++.+.|.+.+
T Consensus 83 Pq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999976655444 55889999887664
No 252
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.29 E-value=4e-12 Score=107.45 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=74.4
Q ss_pred EcCccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcC---cccccE
Q 010804 35 TLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYE---IRGFPT 110 (500)
Q Consensus 35 ~l~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~---i~~~P~ 110 (500)
.++++.+..+. .++++++|.||++||++|+.+.|.+.++++.+. ++.|..||.+.++. ++.+|+ +.++||
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~~--~~~~~~~~~v~~iPt 113 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAED--DLRQRLALERIAIPL 113 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHHH--HTTTTTTCSSCCSSE
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCHH--HHHHHHHcCCCCcCe
Confidence 35555555443 257899999999999999999999999998763 39999999887776 889887 999999
Q ss_pred EEEEecCCceeeecCCCCCHHHHHHHHH
Q 010804 111 IKILRNGGKTIQEYKGPREADGIVEYLK 138 (500)
Q Consensus 111 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 138 (500)
++++++||+...++ |... ..+.+.+.
T Consensus 114 ~i~~~~~G~~~~~~-g~~p-~~~~~~i~ 139 (167)
T 1z6n_A 114 VLVLDEEFNLLGRF-VERP-QAVLDGGP 139 (167)
T ss_dssp EEEECTTCCEEEEE-ESSC-HHHHHHCH
T ss_pred EEEECCCCCEEEEE-cCCC-HHHHHhHH
Confidence 99999887877666 5443 33334444
No 253
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.29 E-value=1.1e-11 Score=101.69 Aligned_cols=101 Identities=22% Similarity=0.384 Sum_probs=80.3
Q ss_pred EEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC---------------------
Q 010804 379 VLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--------------------- 437 (500)
Q Consensus 379 ~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~--------------------- 437 (500)
.++++.+.-.. ..++.++|+||++||++|+...+.+.++...++ ++.++.++++.
T Consensus 12 ~~~g~~~~l~~-~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (136)
T 1zzo_A 12 TLDGHDFHGES-LLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLA 87 (136)
T ss_dssp BTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEE
T ss_pred cCCCCEeeHHH-hCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEE
Confidence 33444444332 246899999999999999999999999999887 58888888854
Q ss_pred --CCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 438 --NDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 438 --~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
+..+.+.|++.++|+++++++++++.++.|..+.+++.++|++.++
T Consensus 88 d~~~~~~~~~~i~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 88 DTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CTTCHHHHHTTCCSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred cCCcHHHHHcCCCCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 2334566899999999999877775588899999999999998764
No 254
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.29 E-value=4.7e-12 Score=106.36 Aligned_cols=99 Identities=19% Similarity=0.309 Sum_probs=79.1
Q ss_pred cchhhhhh---cCCCeEEEEEE-CCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCCCC-----------CCCCC
Q 010804 383 DSLQDMVF---NSGKNVLLEFY-APWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATAND-----------IPGDT 444 (500)
Q Consensus 383 ~~~~~~~~---~~~~~~~v~f~-~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~~~-----------~~~~~ 444 (500)
.++.+.+. ..+++++|+|| ++||++|+.+.|.+ .++....+. ++.++.+|++... .+.+.
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~~~~~~~~~~l~~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQPEEQRQKNQELKAQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCChhhHhhHHHHHHH
Confidence 44555442 34889999999 99999999999999 777665543 6999999998765 45667
Q ss_pred CCcCcceEEEEEcCCCc-eEEecCCC--CHHHHHHHHHhhcCC
Q 010804 445 FEVQGYPTVFFRSASGK-TVPYEGDR--TKEDIVDFIENNRDK 484 (500)
Q Consensus 445 ~~i~~~P~~~~~~~~~~-~~~~~g~~--~~~~l~~~i~~~~~~ 484 (500)
|++.++|++++++++|+ +.++ |.. +.+.+.++|++.+++
T Consensus 112 ~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp TTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred cCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 99999999999966666 4467 888 899999999987654
No 255
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.28 E-value=9.4e-11 Score=106.81 Aligned_cols=197 Identities=13% Similarity=0.187 Sum_probs=142.6
Q ss_pred CceEEcCc-cChhhhhcc-CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 31 EFVLTLDH-SNFSDTVSK-HNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 31 ~~v~~l~~-~~~~~~~~~-~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
..+..|++ ++++.+++. ++.++|-|++++| ....+.|.++|+.+++. +.|+.+. +.. +++++++++
T Consensus 6 P~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~---~~F~~t~---~~~--v~~~~~v~~- 73 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLRED---YKFHHTF---STE--IAKFLKVSL- 73 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT---CCEEEEC---CHH--HHHHHTCCS-
T ss_pred CCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcC---cEEEEEC---cHH--HHHHcCCCC-
Confidence 44667755 788888888 8999999999865 56789999999999765 8898875 233 899999987
Q ss_pred cEEEEEecCC------ceeeecC--CCCCHHHHHHHHHhhcCCCccccCChhhHhhhhccCCeEEEEEecCCC-------
Q 010804 109 PTIKILRNGG------KTIQEYK--GPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFS------- 173 (500)
Q Consensus 109 P~~~~~~~~~------~~~~~~~--g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~------- 173 (500)
|++++|+++. +....|. |..+.+.|.+||....-|.+.++ +.+....+.......+++++.+..
T Consensus 74 p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~-t~~n~~~~~~~~~l~~~~~~~d~~~~~~~~~ 152 (250)
T 3ec3_A 74 GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHR-KTSNDAKRYSKRPLVVVYYSVDFSFDYRTAT 152 (250)
T ss_dssp SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEE-CTTTHHHHSCSSSEEEEEECCCCSTTTHHHH
T ss_pred CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeec-CccchhhhhccCccEEEEEecccccccchhH
Confidence 9999999631 2335788 47899999999999999999999 555555555544444444443322
Q ss_pred chhHHHHHHHHHHhcCCceEEEeecccc---cCCCCCCCC----CCeEEEeccCCCccccc-CCCCHHHHHHHHHHcc
Q 010804 174 GEEFENYTALAEKLRSDYEFGHTQNAKL---LPRGESSVT----GPVVRLFKPFDELFVDF-KDFKVDALEKFVEESS 243 (500)
Q Consensus 174 ~~~~~~f~~~a~~~~~~~~f~~~~~~~~---~~~~~~~~~----~p~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~ 243 (500)
......+.++|+.++ .+.|+++...+. +.. ++++ .|.++++.....+..+. ++++.+.|..|++...
T Consensus 153 ~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~--fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 153 QFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKD--LGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHH--TTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHH--cCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHH
Confidence 124578889999999 999999874432 233 3443 25677666444444444 7899999999998654
No 256
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.27 E-value=2.3e-11 Score=100.68 Aligned_cols=104 Identities=20% Similarity=0.422 Sum_probs=78.2
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHH---HHHHhcCCCCCeEEEEEecChhhhH------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEK---AASELSSHDPPVVLAKVDANEEANK------------ 97 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~---~~~~~~~~~~~v~~~~vd~~~~~~~------------ 97 (500)
+..++.+.+...-.++++++|.||++||++|+...|.+.+ +++.+++.+ +.+..|+++.....
T Consensus 12 l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~~~ 89 (142)
T 3ewl_A 12 YVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGT--LRVLAIYPDENREEWATKAVYMPQGW 89 (142)
T ss_dssp EECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTS--EEEEEEECSSCHHHHHHHHTTSCTTC
T ss_pred EECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCC--eEEEEEEecCCHHHHHHHHHHcCCCc
Confidence 3445555554444478999999999999999999999988 888887543 88888887754321
Q ss_pred --------HH--HHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 98 --------EL--ASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 98 --------~~--~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
.+ ++.|+|.++|++++++.+|+... +..+.+.+.+++.+..
T Consensus 90 ~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 90 IVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp EEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred ceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 12 33899999999999987777644 5678999999988754
No 257
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.26 E-value=1.7e-11 Score=103.24 Aligned_cols=98 Identities=19% Similarity=0.394 Sum_probs=79.7
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------------------hhhH
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------------------EANK 97 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~ 97 (500)
+.+......+++++|.||++||++|+.+.|.+.+++++ +++.++.|+++. +...
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD-----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANG 107 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC-----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTS
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchh
Confidence 55666655789999999999999999999999988765 237788877642 1222
Q ss_pred HHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 98 ELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 98 ~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
.++++|++.++|+++++..+|+....+.|..+.+.+.+++.+.+
T Consensus 108 ~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 108 RASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred HHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 48999999999999999877788889999999999999888764
No 258
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.26 E-value=5.4e-11 Score=99.65 Aligned_cols=105 Identities=10% Similarity=0.146 Sum_probs=83.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhH---------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANK--------------- 97 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~--------------- 97 (500)
+..++.+.+...-.++++++|.||++||++|+...|.+.++++++.+.+ +.++.|+++.....
T Consensus 20 l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~--~~vv~i~~d~~~~~~~~~~~~~~~~~~~d 97 (152)
T 2lrt_A 20 LKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQG--FEIYQISLDGDEHFWKTSADNLPWVCVRD 97 (152)
T ss_dssp EEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEECSCCHHHHHHHHTTCSSEEEEC
T ss_pred EEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCC--eEEEEEEccCCHHHHHHHHhCCCceEEEC
Confidence 4445554444333467899999999999999999999999999997653 88888888765421
Q ss_pred ------HHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 98 ------ELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 98 ------~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
.++++|++.++|++++++.+|+...++.|..+.+....-+.+
T Consensus 98 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 98 ANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKKLLE 145 (152)
T ss_dssp SSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHHHHG
T ss_pred CCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHHHHh
Confidence 278899999999999999888999999999887776655443
No 259
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.26 E-value=2.9e-11 Score=100.09 Aligned_cols=102 Identities=12% Similarity=0.210 Sum_probs=78.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHH---HHHHhcCCCCCeEEEEEecChhhhH------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEK---AASELSSHDPPVVLAKVDANEEANK------------ 97 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~---~~~~~~~~~~~v~~~~vd~~~~~~~------------ 97 (500)
+..++.+.+...--.+++++|.||++||++|+...|.+.+ +++++++.+ +.+..|+.+.....
T Consensus 16 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~--~~vi~i~~d~~~~~~~~~~~~~~~~~ 93 (142)
T 3eur_A 16 YTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKK--LKVLSIYPDEELDEWKKHRNDFAKEW 93 (142)
T ss_dssp EEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTS--EEEEEEECSSCHHHHHHHGGGSCTTS
T ss_pred EEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCC--eEEEEEEcCCCHHHHHHHHHhccccc
Confidence 4445555444433467999999999999999999999999 999997643 88888888765321
Q ss_pred ----------HHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 98 ----------ELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 98 ----------~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
.+++.|+|.++|++++++.+|+.+.+..| .+.+.+++.+
T Consensus 94 ~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~e 142 (142)
T 3eur_A 94 TNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLAE 142 (142)
T ss_dssp EEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHHC
T ss_pred ccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCCC---HHHHHHHHhC
Confidence 14778999999999999988887666543 6778877753
No 260
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.26 E-value=2e-11 Score=101.68 Aligned_cols=105 Identities=16% Similarity=0.272 Sum_probs=84.8
Q ss_pred EEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC--------------------
Q 010804 378 KVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-------------------- 437 (500)
Q Consensus 378 ~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-------------------- 437 (500)
..++++.+.... ..+++++|+||++||++|+.+.|.+.++...+++. +.++.++++.
T Consensus 15 ~~~~g~~~~~~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQL-IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhh-cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 456777766544 35789999999999999999999999999998763 8888888653
Q ss_pred -------CCCCCCCCCcCcceEEEEEcCCCce-EEecCCCCHHHHHHHHHhhcCCC
Q 010804 438 -------NDIPGDTFEVQGYPTVFFRSASGKT-VPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 438 -------~~~~~~~~~i~~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+....+.|++.++|+++++++++++ .++.|..+.+++.++|++.+++.
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAET 147 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTTC
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhcc
Confidence 2334556899999999999767764 47889899999999999887653
No 261
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.25 E-value=2.2e-11 Score=103.97 Aligned_cols=104 Identities=13% Similarity=0.250 Sum_probs=81.0
Q ss_pred ceEEc--CccChhhhh-ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------------
Q 010804 32 FVLTL--DHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE--------------- 93 (500)
Q Consensus 32 ~v~~l--~~~~~~~~~-~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--------------- 93 (500)
.+..+ +.+.+.... .++++++|.||++||++|+...|.+.+++++ + +.++.|+++.
T Consensus 32 ~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~--v~vv~v~~~~~~~~~~~~~~~~~~~ 105 (168)
T 2b1k_A 32 RLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----G--IRVVGMNYKDDRQKAISWLKELGNP 105 (168)
T ss_dssp EEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T--CCEEEEEESCCHHHHHHHHHHHCCC
T ss_pred EeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----C--CEEEEEECCCChHHHHHHHHHcCCC
Confidence 34555 455554443 5889999999999999999999999998876 2 6666666421
Q ss_pred ------hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 94 ------EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 94 ------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+....++++|+|.++|+.+++..+|+...++.|..+.+.+.+++.+.+
T Consensus 106 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 106 YALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp CSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred CceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 122238999999999988888877888889999999999998888765
No 262
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.25 E-value=3.1e-11 Score=102.68 Aligned_cols=104 Identities=15% Similarity=0.322 Sum_probs=84.1
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC------------------h
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN------------------E 93 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~------------------~ 93 (500)
.+..++.+.+...-.++++++|.||++||++|+...|.+.++++++. ++.++.|+++ .
T Consensus 21 ~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3ha9_A 21 SLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGYPPPD 96 (165)
T ss_dssp CEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTSCCCC
T ss_pred EeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccCCCCC
Confidence 34556666555554578999999999999999999999999999987 3999999987 2
Q ss_pred hhh--------------------HHHHHhcCcccccEEEEEecCCceeeecCCCC-CHHHHHHHHHhhc
Q 010804 94 EAN--------------------KELASQYEIRGFPTIKILRNGGKTIQEYKGPR-EADGIVEYLKKQS 141 (500)
Q Consensus 94 ~~~--------------------~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~-~~~~l~~~i~~~~ 141 (500)
... ..++++|+|.++|++++++.+|+... .|.. +.+.|.+.|.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 97 TPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp CHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 210 14899999999999999988777755 8888 9999999998765
No 263
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.23 E-value=2e-11 Score=103.86 Aligned_cols=96 Identities=22% Similarity=0.418 Sum_probs=77.7
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCC--------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTF-------------------------- 445 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~-------------------------- 445 (500)
.+++++|+||++||++|+.+.|.+.++...++.. ++.++.|+++.+....+.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 4689999999999999999999999999999753 6999999998654333333
Q ss_pred -CcCcceEEEEEcCCCce-EEecCCCCHHHHHHHHHhhcCCCCCC
Q 010804 446 -EVQGYPTVFFRSASGKT-VPYEGDRTKEDIVDFIENNRDKAAPK 488 (500)
Q Consensus 446 -~i~~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~~~~~~~~ 488 (500)
++.++|+++++++++++ .++.|..+.+++.++|++.+++....
T Consensus 112 ~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~~~ 156 (165)
T 3or5_A 112 GGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKAAT 156 (165)
T ss_dssp TCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-----
T ss_pred cCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhccc
Confidence 78999999999777775 47889999999999999998765443
No 264
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.23 E-value=8.4e-12 Score=105.50 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=68.2
Q ss_pred EeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCC---cCcceEEEEE
Q 010804 380 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFE---VQGYPTVFFR 456 (500)
Q Consensus 380 l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~---i~~~P~~~~~ 456 (500)
++.+.+..+....++.++|.||++||++|+.+.|.+.+++..+. ++.|+.+|.+.++....+|. +.++|+++++
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 34444444332356789999999999999999999999998764 59999999998877777676 9999999999
Q ss_pred cCCCceEEecCCCC
Q 010804 457 SASGKTVPYEGDRT 470 (500)
Q Consensus 457 ~~~~~~~~~~g~~~ 470 (500)
++|++.+...|...
T Consensus 118 ~~~G~~~~~~g~~p 131 (167)
T 1z6n_A 118 DEEFNLLGRFVERP 131 (167)
T ss_dssp CTTCCEEEEEESSC
T ss_pred CCCCCEEEEEcCCC
Confidence 88767553335444
No 265
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.22 E-value=2.5e-11 Score=96.73 Aligned_cols=104 Identities=21% Similarity=0.382 Sum_probs=93.2
Q ss_pred HhhcCCCccc--cCChhhHhhhhccCCeEEEEEecCCCchhHHHHHHHHHHhcCCceEEEeecccccCCCCCCCCCCeEE
Q 010804 138 KKQSGPASAE--IKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVR 215 (500)
Q Consensus 138 ~~~~~~~~~~--i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~f~~~a~~~~~~~~f~~~~~~~~~~~~~~~~~~p~~~ 215 (500)
.+..+|+... |++.++++++++.+.+++|+||.+.+++.++.|.++|+.+ +++.|+.+.+++++++ ++++.|+++
T Consensus 14 ~kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~~~~v~~~--~~v~~~~vv 90 (124)
T 2l4c_A 14 SDGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGISTDSEVLTH--YNITGNTIC 90 (124)
T ss_dssp CCCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEECCHHHHHH--TTCCSSCEE
T ss_pred HhccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEChHHHHHH--cCCCCCeEE
Confidence 3566777755 9999999999999999999999999999999999999999 9999999999999999 888899999
Q ss_pred EeccCCCcc-cccC----CCCHHHHHHHHHHccC
Q 010804 216 LFKPFDELF-VDFK----DFKVDALEKFVEESSI 244 (500)
Q Consensus 216 ~~~~~~~~~-~~~~----~~~~~~l~~~i~~~~~ 244 (500)
+|++.++.. .|.| +.+.++|.+||..+++
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 999987666 7775 7899999999998763
No 266
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.21 E-value=5.3e-11 Score=98.53 Aligned_cols=99 Identities=14% Similarity=0.305 Sum_probs=80.2
Q ss_pred cChhhhh----ccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEE
Q 010804 39 SNFSDTV----SKHNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTI 111 (500)
Q Consensus 39 ~~~~~~~----~~~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~ 111 (500)
.+|+.++ .++|+++|+||++||..|+.+.... ..+++.++.. +++..+|.+......+.++|++.++|++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~~~~~l~~~y~v~~~P~~ 105 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSEEGQRYIQFYKLGDFPYV 105 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSHHHHHHHHHHTCCSSSEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCHhHHHHHHHcCCCCCCEE
Confidence 4565554 5799999999999999999997544 4555555444 9999999987777779999999999999
Q ss_pred EEEecC-CceeeecCCCCCHHHHHHHHHhhc
Q 010804 112 KILRNG-GKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 112 ~~~~~~-~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+|+++. |+.+..+.| .+.+.+.+++.+.+
T Consensus 106 ~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 106 SILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp EEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred EEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 999985 667777766 89999999888765
No 267
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.21 E-value=8.3e-11 Score=97.52 Aligned_cols=92 Identities=14% Similarity=0.260 Sum_probs=73.0
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh-----------------
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE----------------- 94 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~----------------- 94 (500)
.+..++.+.+...-.++++++|+||++||++|+...|.+.++++++.+. .++.++.|+++..
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 90 (144)
T 1i5g_A 12 NVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKMPWLALP 90 (144)
T ss_dssp EEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECC
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCccccc
Confidence 3556666666655557899999999999999999999999999999741 2488888888752
Q ss_pred -----hhHHHHHhcCcccccEEEEEe-cCCceeeec
Q 010804 95 -----ANKELASQYEIRGFPTIKILR-NGGKTIQEY 124 (500)
Q Consensus 95 -----~~~~~~~~~~i~~~P~~~~~~-~~~~~~~~~ 124 (500)
....++++|+|.++|++++++ .+|+.+.++
T Consensus 91 ~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 91 FEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp TTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred cCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEecc
Confidence 234599999999999999998 666765543
No 268
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.21 E-value=3.7e-11 Score=100.55 Aligned_cols=93 Identities=15% Similarity=0.307 Sum_probs=76.4
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC------------------------CCCCCCCC-
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN------------------------DIPGDTFE- 446 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~------------------------~~~~~~~~- 446 (500)
.+++++|+||++||++|+...|.+.++...++. .++.++.|+++.. ..+.+.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK-GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 478999999999999999999999999999854 3799999998631 11234577
Q ss_pred -cCcceEEEEEcCCCc-eEEecCCCCHHHHHHHHHhhcCCC
Q 010804 447 -VQGYPTVFFRSASGK-TVPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 447 -i~~~P~~~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+.++|++++++++|+ ..++.|..+.++|.++|++..+..
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 899999999977766 458889999999999999887654
No 269
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.21 E-value=3.7e-12 Score=99.10 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=61.9
Q ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC------CCCCCCCCCCcCcceEEEEEcCCCceEEec
Q 010804 393 GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT------ANDIPGDTFEVQGYPTVFFRSASGKTVPYE 466 (500)
Q Consensus 393 ~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~------~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~ 466 (500)
++.++|.||++||++|+.+.|.|.+++..++ .+|++ .+..++++|+|+++||+++ +++ .+.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i---~G~--~~~ 78 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII---NGR--TYT 78 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE---TTE--EEE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE---CCE--Eec
Confidence 5677999999999999999999999986653 45555 4555677899999999877 333 488
Q ss_pred CCCCHHHHHHHHHhhc
Q 010804 467 GDRTKEDIVDFIENNR 482 (500)
Q Consensus 467 g~~~~~~l~~~i~~~~ 482 (500)
|..+.++|.+|+.-..
T Consensus 79 G~~~~~~l~~~~~~~~ 94 (106)
T 3kp8_A 79 GVRSLEALAVASGYPL 94 (106)
T ss_dssp SCCCHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHhCCcc
Confidence 9999999999986443
No 270
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.21 E-value=2.5e-11 Score=100.46 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=65.5
Q ss_pred cCCCeEEEEEECCCChhHhhhhHHHHHHH---HHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCc-eEEec
Q 010804 391 NSGKNVLLEFYAPWCGHCKKLAPILDEVA---VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK-TVPYE 466 (500)
Q Consensus 391 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~~---~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~-~~~~~ 466 (500)
..+++++|+||++||++|+.+.|.+.+.. ...+. ++..+.+|. .+......+++.++|++++|+++|+ +.+..
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~--~fv~V~vD~-e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~ 118 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN--KFIMLNLMH-ETTDKNLSPDGQYVPRIMFVDPSLTVRADIA 118 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH--TCEEEEESS-CCSCGGGCTTCCCSSEEEEECTTSCBCTTCC
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc--CeEEEEecC-CchhhHhhcCCCCCCEEEEECCCCCEEEEEe
Confidence 56899999999999999999999888643 22221 344444442 2344556699999999999985555 44677
Q ss_pred CC----------CCHHHHHHHHHhhcCCC
Q 010804 467 GD----------RTKEDIVDFIENNRDKA 485 (500)
Q Consensus 467 g~----------~~~~~l~~~i~~~~~~~ 485 (500)
|. .+.+++++.+++.+..-
T Consensus 119 G~~~~~~~~~~~~~~~~ll~~~~~al~~~ 147 (151)
T 3ph9_A 119 GRYSNRLYTYEPRDLPLLIENMKKALRLI 147 (151)
T ss_dssp CSCTTSTTCCCGGGHHHHHHHHHHHHSCC
T ss_pred CCcCCcccccchhhHHHHHHHHHHHHHHH
Confidence 76 45677777777766554
No 271
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.20 E-value=8.4e-11 Score=101.11 Aligned_cols=103 Identities=17% Similarity=0.336 Sum_probs=82.5
Q ss_pred eEEcCc--cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-----------------
Q 010804 33 VLTLDH--SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE----------------- 93 (500)
Q Consensus 33 v~~l~~--~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~----------------- 93 (500)
+..++. ..+.....++++++|.||++||++|+...|.+.+++++ + +.++.|+++.
T Consensus 41 l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~--v~vv~vs~~d~~~~~~~~~~~~~~~~~ 114 (176)
T 3kh7_A 41 LPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----G--VVIYGINYKDDNAAAIKWLNELHNPYL 114 (176)
T ss_dssp EEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T--CEEEEEEESCCHHHHHHHHHHTTCCCS
T ss_pred ecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----C--CEEEEEeCCCCHHHHHHHHHHcCCCCc
Confidence 444554 44655556789999999999999999999999998876 2 7777777422
Q ss_pred ----hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 94 ----EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 94 ----~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+....+++.|++.++|++++++.+|+....+.|..+.+.+.++|.+.+
T Consensus 115 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 115 LSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp EEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred eEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 222348899999999999999888899899999999999998888765
No 272
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.20 E-value=1.2e-10 Score=97.27 Aligned_cols=104 Identities=15% Similarity=0.306 Sum_probs=81.5
Q ss_pred eEEcCccChhhh--hccCCeEEEEEECCCChh--hhhhhHHHHHHHHHh-cCCCCCeEEEEEecChhh------------
Q 010804 33 VLTLDHSNFSDT--VSKHNFIVVEFYAPWCGH--CKKLAPEYEKAASEL-SSHDPPVVLAKVDANEEA------------ 95 (500)
Q Consensus 33 v~~l~~~~~~~~--~~~~~~~lv~f~~~~c~~--C~~~~~~~~~~~~~~-~~~~~~v~~~~vd~~~~~------------ 95 (500)
+..++.+.+... -.++++++|.||++||++ |+...|.+.++++++ ++.+ +.++.|+++..+
T Consensus 16 l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~--~~~v~v~~d~~~~~~~~~~~~~~~ 93 (150)
T 3fw2_A 16 LPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKY--IGMLGISLDVDKQQWKDAIKRDTL 93 (150)
T ss_dssp EEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSS--EEEEEEECCSCHHHHHHHHHHTTC
T ss_pred eECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCC--eEEEEEEcCCCHHHHHHHHHHhCC
Confidence 444555544444 447899999999999999 999999999999999 5433 888888887653
Q ss_pred -----------hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 96 -----------NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 96 -----------~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
...+++.|++.++|++++++.+|+...++. +.+.+.+.|.+.+
T Consensus 94 ~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 94 DWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp CSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred CceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 224899999999999999988878777664 6777777776654
No 273
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.20 E-value=4.3e-11 Score=100.16 Aligned_cols=94 Identities=26% Similarity=0.480 Sum_probs=77.8
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------CCCCCCCCcCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------DIPGDTFEVQG 449 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------~~~~~~~~i~~ 449 (500)
.++.++|+||++||++|+...|.+.++...++. .++.++.|+++.. ..+.+.|++.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS-QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 468999999999999999999999999998864 2688888888653 34456689999
Q ss_pred ceEEEEEcCCCce-EEecCCCCHHHHHHHHHhhcCCCC
Q 010804 450 YPTVFFRSASGKT-VPYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 450 ~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
+|+++++++++++ .++.|..+.++|.++|++.+....
T Consensus 104 ~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 9999999766664 478899999999999999887643
No 274
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.19 E-value=5e-11 Score=98.85 Aligned_cols=87 Identities=22% Similarity=0.445 Sum_probs=74.4
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-------------------------CCCCCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-------------------------NDIPGDTFE 446 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-------------------------~~~~~~~~~ 446 (500)
.+++++|+||++||++|+.+.|.+.++...+... ++.++.++++. +..+.+.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 5789999999999999999999999999999742 69999998864 344566799
Q ss_pred cCcceEEEEEcCCCce-EEecCCCCHHHHHHHHH
Q 010804 447 VQGYPTVFFRSASGKT-VPYEGDRTKEDIVDFIE 479 (500)
Q Consensus 447 i~~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~ 479 (500)
+.++|+++++++++++ .++.|..+.++|.++|+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9999999999767764 47889999999999873
No 275
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.19 E-value=9.5e-11 Score=99.07 Aligned_cols=93 Identities=13% Similarity=0.241 Sum_probs=77.5
Q ss_pred CCCeEEEEEECCCChhHhh-hhHHHHHHHHHcCCCCceEEEEEeCC----------------------------CCCC--
Q 010804 392 SGKNVLLEFYAPWCGHCKK-LAPILDEVAVSYQNDADVVIAKFDAT----------------------------ANDI-- 440 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~-~~~~~~~~~~~~~~~~~~~~~~id~~----------------------------~~~~-- 440 (500)
.+++++|+||++||++|+. +.|.+.++...+++. ++.++.|+++ ....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 4789999999999999999 599999999999753 6899988862 2222
Q ss_pred ----CCCCCCcCcceEEEEEcCCCce-EEecCCCCHHHHHHHHHhhcCCC
Q 010804 441 ----PGDTFEVQGYPTVFFRSASGKT-VPYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 441 ----~~~~~~i~~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+.+.|++.++|+++++++++++ .++.|..+.+.+.++|++.+++.
T Consensus 108 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 157 (160)
T 3lor_A 108 RIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSET 157 (160)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred hhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhcc
Confidence 4456899999999999877774 47889999999999999988654
No 276
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.18 E-value=2.1e-10 Score=99.65 Aligned_cols=109 Identities=18% Similarity=0.392 Sum_probs=85.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh---hhHHHHHhcCcc---
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE---ANKELASQYEIR--- 106 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~~~i~--- 106 (500)
+..++.+.+...-.++++++|.||++||++|+...+.+.++++++.+. ++.++.|+++.+ ...++++++++.
T Consensus 45 l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 122 (186)
T 1jfu_A 45 FEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP--NFEVVAINIDTRDPEKPKTFLKEANLTRLG 122 (186)
T ss_dssp EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT--TEEEEEEECCCSCTTHHHHHHHHTTCCTTC
T ss_pred eEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC--CcEEEEEECCCCCHHHHHHHHHHcCCCCCc
Confidence 344555555544457899999999999999999999999999999743 388888888754 123477777774
Q ss_pred --------------------cccEEEEEecCCceeeecCCCCC--HHHHHHHHHhhcCC
Q 010804 107 --------------------GFPTIKILRNGGKTIQEYKGPRE--ADGIVEYLKKQSGP 143 (500)
Q Consensus 107 --------------------~~P~~~~~~~~~~~~~~~~g~~~--~~~l~~~i~~~~~~ 143 (500)
++|++++++.+|+....+.|..+ .+.+.++|.+.+..
T Consensus 123 ~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 123 YFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp CEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred eEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 89999999888898889999764 78899999887754
No 277
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.18 E-value=1.7e-10 Score=95.96 Aligned_cols=90 Identities=14% Similarity=0.289 Sum_probs=70.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE------------------ 94 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------------ 94 (500)
+..++. .+...-.++++++|+||++||++|+...|.+.++++++.+. .++.++.|+++..
T Consensus 14 l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (146)
T 1o8x_A 14 LRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPF 91 (146)
T ss_dssp EEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCG
T ss_pred EEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHHCCceeecc
Confidence 445555 55554457899999999999999999999999999999741 2488888888753
Q ss_pred ----hhHHHHHhcCcccccEEEEEe-cCCceeeec
Q 010804 95 ----ANKELASQYEIRGFPTIKILR-NGGKTIQEY 124 (500)
Q Consensus 95 ----~~~~~~~~~~i~~~P~~~~~~-~~~~~~~~~ 124 (500)
....++++|+|.++|++++++ .+|+.+.+.
T Consensus 92 ~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 92 AQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp GGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred chhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEec
Confidence 234599999999999999999 666765543
No 278
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.17 E-value=1.8e-11 Score=104.05 Aligned_cols=107 Identities=14% Similarity=0.259 Sum_probs=81.9
Q ss_pred CeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC------------------
Q 010804 376 PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA------------------ 437 (500)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~------------------ 437 (500)
.+..++++.+.... ..++.++|+||++||++|+.+.|.|.+++..++.. ++.++.|+++.
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 46666777666443 45789999999999999999999999999887542 46666665431
Q ss_pred ----------CCCCCCCCCcCcceEEEEEcCCCc-eEEecCCCCHHHHHHHHHhhcCC
Q 010804 438 ----------NDIPGDTFEVQGYPTVFFRSASGK-TVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 438 ----------~~~~~~~~~i~~~P~~~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+..+.+.|++.++|++++++++++ ..++.|..+.++|.++|++.+..
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 222234688999999999976666 44788999999999999987754
No 279
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.17 E-value=9e-11 Score=99.01 Aligned_cols=94 Identities=18% Similarity=0.314 Sum_probs=77.7
Q ss_pred CCCeEEEEEECCCChhHhhh-hHHHHHHHHHcCCCCceEEEEEeCCC----------------------------CC---
Q 010804 392 SGKNVLLEFYAPWCGHCKKL-APILDEVAVSYQNDADVVIAKFDATA----------------------------ND--- 439 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~-~~~~~~~~~~~~~~~~~~~~~id~~~----------------------------~~--- 439 (500)
.+++++|+||++||++|+.. .|.+.++...+++. ++.++.|+++. ..
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 47899999999999999996 99999999999753 69999888641 11
Q ss_pred --CCCCCCCcCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCCCC
Q 010804 440 --IPGDTFEVQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 440 --~~~~~~~i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~~~ 486 (500)
.+.+.|++.++|+++++++++++. ++.|..+.++|.+.|++.++++.
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~~ 155 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEAA 155 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSCC
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhccCC
Confidence 134568999999999998777744 78899999999999999987653
No 280
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.16 E-value=1.7e-10 Score=98.02 Aligned_cols=89 Identities=17% Similarity=0.329 Sum_probs=70.9
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN---------------- 96 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---------------- 96 (500)
+..++. .+...-.+++++||+||++||++|+...|.+.++++++++. .++.++.|+++....
T Consensus 34 l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3s9f_A 34 LRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPWLSIPF 111 (165)
T ss_dssp EEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCT
T ss_pred eecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCCccccc
Confidence 445555 55554457899999999999999999999999999999762 248888888776532
Q ss_pred ------HHHHHhcCcccccEEEEEecC-Cceeee
Q 010804 97 ------KELASQYEIRGFPTIKILRNG-GKTIQE 123 (500)
Q Consensus 97 ------~~~~~~~~i~~~P~~~~~~~~-~~~~~~ 123 (500)
..++++|+|.++|++++++.+ |+.+.+
T Consensus 112 ~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 112 ANRNIVEALTKKYSVESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEES
T ss_pred CchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEec
Confidence 459999999999999999975 777554
No 281
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.16 E-value=1.5e-10 Score=109.99 Aligned_cols=101 Identities=13% Similarity=0.211 Sum_probs=83.9
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-------------------------
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------------- 93 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------------- 93 (500)
+.+...-.+++++||.||++||++|+...|.+.++++++.+.+ +.++.|+++.
T Consensus 73 ~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~--v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~ 150 (352)
T 2hyx_A 73 KPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSG--LAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIAL 150 (352)
T ss_dssp CCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEE
T ss_pred CEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCC--eEEEEEECCcccccCCHHHHHHHHHHcCCCccEEe
Confidence 3444443468999999999999999999999999999997643 8899998752
Q ss_pred hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 94 EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 94 ~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+....++++|+|.++|++++++.+|+....+.|..+.+.+.++|.+.+
T Consensus 151 D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 151 DNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp CTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 111248999999999999999888899999999999999999998765
No 282
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.15 E-value=2.9e-11 Score=88.29 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=61.6
Q ss_pred EEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCC-CHHHH
Q 010804 396 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDR-TKEDI 474 (500)
Q Consensus 396 ~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~-~~~~l 474 (500)
..|.||++||++|+.+.|.+.+++..++. ++.++.+| +....++|++.++|++++ +++.... |.. +.++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~---~~~~~~~~~v~~~Pt~~~---~G~~~~~-G~~~~~~~l 72 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK---EMDQILEAGLTALPGLAV---DGELKIM-GRVASKEEI 72 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC---SHHHHHHHTCSSSSCEEE---TTEEEEC-SSCCCHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec---CHHHHHHCCCCcCCEEEE---CCEEEEc-CCCCCHHHH
Confidence 45889999999999999999999998875 69999998 555667799999999988 4454433 886 99999
Q ss_pred HHHH
Q 010804 475 VDFI 478 (500)
Q Consensus 475 ~~~i 478 (500)
.++|
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8886
No 283
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.15 E-value=1.6e-10 Score=101.35 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=84.1
Q ss_pred EcCccChhhhhccCC-eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh--------------------
Q 010804 35 TLDHSNFSDTVSKHN-FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE-------------------- 93 (500)
Q Consensus 35 ~l~~~~~~~~~~~~~-~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------------------- 93 (500)
.++.+.+...-..++ +++|.||++||++|+...|.+.++++++.+.+ +.++.|+++.
T Consensus 32 ~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~ 109 (196)
T 2ywi_A 32 VIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKG--VSFVAINSNDAEQYPEDSPENMKKVAEELG 109 (196)
T ss_dssp TTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSCTTTCGGGSHHHHHHHHHHHT
T ss_pred cCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECCccccccccCHHHHHHHHHHcC
Confidence 455555554444566 59999999999999999999999999997643 8888888842
Q ss_pred -------hhhHHHHHhcCcccccEEEEEecCCceeee---------cCCCCCHHHHHHHHHhhcC
Q 010804 94 -------EANKELASQYEIRGFPTIKILRNGGKTIQE---------YKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 94 -------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~---------~~g~~~~~~l~~~i~~~~~ 142 (500)
+....++++|++.++|++++++.+|+...+ +.|..+.+.|.+.|.+.+.
T Consensus 110 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 110 YPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp CCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 122348999999999999999887788776 5688899999999988764
No 284
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.14 E-value=1.2e-10 Score=96.38 Aligned_cols=89 Identities=17% Similarity=0.452 Sum_probs=71.0
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHH---HHHHcCCCCceEEEEEeCCCCCCC------------------------CCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDE---VAVSYQNDADVVIAKFDATANDIP------------------------GDT 444 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~---~~~~~~~~~~~~~~~id~~~~~~~------------------------~~~ 444 (500)
.++.++|+||++||++|+...|.+.+ +...+++ .++.++.++++.+... .+.
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 47899999999999999999999888 7877754 2699999988754322 346
Q ss_pred CCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 445 FEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 445 ~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
|++.++|++++++++++++. +..+.+++.++|++..+
T Consensus 105 ~~v~~~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRVIL--KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp SCCCSSSEEEEECTTCBEEE--CSCCHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCCCEEe--cCCCHHHHHHHHHHHcc
Confidence 99999999999987777543 56889999999998754
No 285
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.14 E-value=3.2e-10 Score=93.90 Aligned_cols=89 Identities=17% Similarity=0.307 Sum_probs=68.9
Q ss_pred EEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh------------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA------------------ 95 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------ 95 (500)
..++. .+...-.++++++|.||++||++|+...|.+.++++++.+. .++.++.|+++...
T Consensus 15 ~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~ 92 (144)
T 1o73_A 15 LSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGKMPWLALPFD 92 (144)
T ss_dssp BCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTT
T ss_pred ecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCceEeecc
Confidence 34444 44444457889999999999999999999999999999731 23888888877532
Q ss_pred ----hHHHHHhcCcccccEEEEEe-cCCceeeec
Q 010804 96 ----NKELASQYEIRGFPTIKILR-NGGKTIQEY 124 (500)
Q Consensus 96 ----~~~~~~~~~i~~~P~~~~~~-~~~~~~~~~ 124 (500)
...++++|+|.++|++++++ .+|+.+.+.
T Consensus 93 ~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 93 QRSTVSELGKTFGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESC
T ss_pred chhHHHHHHHHcCCCCCCEEEEEECCCCeEEecc
Confidence 34599999999999999999 666765543
No 286
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.13 E-value=3.9e-10 Score=114.23 Aligned_cols=179 Identities=17% Similarity=0.174 Sum_probs=127.9
Q ss_pred CCceEEEEEeCCCCCchHHHHHHHHHHHhhcCceeEEEEEcccchhhHHhhcCCCCCCCceEEEEeCCC-Ccc-CCCCCC
Q 010804 267 PNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQTNDG-QKY-LKPNLD 344 (500)
Q Consensus 267 ~~~~~~l~~~~~~~~~~~~~~~l~~va~~~~~~~~~f~~~d~~~~~~~~~~~gi~~~~~P~i~i~~~~~-~~y-~~~~~~ 344 (500)
..|+.+.++..+++.+++..+.+++++.- .++ +++...+.. ....|++.|.+.+. ... |-|-+.
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~-i~~~~~~~~------------~~~~p~~~~~~~~~~~~i~f~g~p~ 83 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SDK-VTFKEDNTL------------PVRKPSFLITNPGSQQGPRFAGSPL 83 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTT-EEEEECTTS------------SSCSSEEEEECTTCCCSCEEESCCC
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCc-eEEEEcCCc------------ccCCCEEEEecCCCcceEEEeccCc
Confidence 34665544443555567777888887654 345 776432211 03789999987643 222 557778
Q ss_pred hhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCC
Q 010804 345 ADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN 424 (500)
Q Consensus 345 ~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~ 424 (500)
-..+..|+..+++-.-. ...++.+.++.+.....+..++.||++||++|+.+.|.+++++..+.
T Consensus 84 g~e~~s~~~~l~~~~~~---------------~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~- 147 (521)
T 1hyu_A 84 GHEFTSLVLALLWTGGH---------------PSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP- 147 (521)
T ss_dssp GGGHHHHHHHHHHHTTC---------------CCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-
T ss_pred chhHHHHHHHHHhhcCC---------------CCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-
Confidence 88888888887642111 12355566666543456678999999999999999999999998864
Q ss_pred CCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhh
Q 010804 425 DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 425 ~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
++.+..+|++.++...++|+++++|++++ +++.+ ..|..+.++|.+|+...
T Consensus 148 --~v~~~~vd~~~~~~~~~~~~i~svPt~~i---~g~~~-~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 --RIKHTAIDGGTFQNEITERNVMGVPAVFV---NGKEF-GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --TEEEEEEETTTCHHHHHHTTCCSSSEEEE---TTEEE-EESCCCHHHHHHHHCCS
T ss_pred --ceEEEEEechhhHHHHHHhCCCccCEEEE---CCEEE-ecCCCCHHHHHHHHhhc
Confidence 69999999999999998899999999977 44433 33889999999999764
No 287
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.13 E-value=1.1e-10 Score=98.11 Aligned_cols=90 Identities=24% Similarity=0.381 Sum_probs=74.3
Q ss_pred CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC---------------------------CCCCCCCCCC
Q 010804 394 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT---------------------------ANDIPGDTFE 446 (500)
Q Consensus 394 ~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~---------------------------~~~~~~~~~~ 446 (500)
++++|+||++||++|+...|.+.++...+ ++.++.|+++ .+..+.+.|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999988 3777777772 2233456799
Q ss_pred cCcceEEEEEcCCCc-eEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 447 VQGYPTVFFRSASGK-TVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 447 i~~~P~~~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
+.++|++++++++++ ..++.|..+.++|.++|++..+.+..
T Consensus 107 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLEG 148 (154)
T ss_dssp BCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC--
T ss_pred CCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcccc
Confidence 999999999977777 44788999999999999998876543
No 288
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.13 E-value=3.4e-10 Score=98.49 Aligned_cols=108 Identities=12% Similarity=0.144 Sum_probs=82.8
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------- 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 93 (500)
+..++.+.+...-.++++++|.||++||++|+...+.+.++++++.+. +.++.|+++.
T Consensus 18 l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~d~~~~~~~~~~~~ 94 (188)
T 2cvb_A 18 LPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPEDAPEKMAAFAEEH 94 (188)
T ss_dssp EECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGGGSHHHHHHHHHHH
T ss_pred eecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccccCHHHHHHHHHHh
Confidence 344555544444446799999999999999999999999999999764 8889998842
Q ss_pred --------hhhHHHHHhcCcccccEEEEEecCCceeee--------cCCCCCHHHHHHHHHhhcCC
Q 010804 94 --------EANKELASQYEIRGFPTIKILRNGGKTIQE--------YKGPREADGIVEYLKKQSGP 143 (500)
Q Consensus 94 --------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~--------~~g~~~~~~l~~~i~~~~~~ 143 (500)
+....+++.|++.++|++++++.+|+...+ +.|..+.+.|.+.|.+.+..
T Consensus 95 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 95 GIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp TCCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred CCCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 112348899999999999999887777655 22344778899888887643
No 289
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.12 E-value=1e-10 Score=89.82 Aligned_cols=77 Identities=17% Similarity=0.244 Sum_probs=66.8
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCCCCC
Q 010804 50 FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPRE 129 (500)
Q Consensus 50 ~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~ 129 (500)
..++.|+++||+.|+.+.+.++++++++. +.+..+|++.++. ++.+|+++ +|++++|.+| +.+ ..|..+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-----i~~~~vDId~d~~--l~~~ygv~-VP~l~~~~dG-~~v--~~g~~~ 98 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-----FELEVINIDGNEH--LTRLYNDR-VPVLFAVNED-KEL--CHYFLD 98 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-----CCCEEEETTTCHH--HHHHSTTS-CSEEEETTTT-EEE--ECSSCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-----CeEEEEECCCCHH--HHHHhCCC-CceEEEEECC-EEE--EecCCC
Confidence 56899999999999999999999998862 7789999998877 99999997 9999999876 543 468889
Q ss_pred HHHHHHHH
Q 010804 130 ADGIVEYL 137 (500)
Q Consensus 130 ~~~l~~~i 137 (500)
.+.|.+||
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998887
No 290
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.12 E-value=8.6e-11 Score=98.40 Aligned_cols=93 Identities=19% Similarity=0.438 Sum_probs=78.2
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-----------------------CCCCCCCcC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND-----------------------IPGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-----------------------~~~~~~~i~ 448 (500)
.+++++|+||++||++|+...+.+.++...+.+ .++.++.++++.+. .+.+.|++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAG-KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT-SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc-CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 468999999999999999999999999999865 36999999988753 344568999
Q ss_pred cceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCCC
Q 010804 449 GYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 449 ~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
++|+++++++++++. ++.|..+.++|.++|++..+..
T Consensus 108 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 108 GIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp SSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 999999998666644 6778889999999999887654
No 291
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.11 E-value=1.4e-10 Score=96.58 Aligned_cols=90 Identities=17% Similarity=0.349 Sum_probs=73.4
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHc-CCCCceEEEEEeCCCC-------------------------CCCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATAN-------------------------DIPGDTF 445 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~-~~~~~~~~~~id~~~~-------------------------~~~~~~~ 445 (500)
.+++++|+||++||++|+...|.+.++...+ +. .++.++.++++.. ....+.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 4789999999999999999999999999999 54 3699999988763 3445679
Q ss_pred CcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCC
Q 010804 446 EVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 446 ~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++.++|+++++++++++..... +.+++.++|++.+++
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~--~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKILARDI--QGEALTGKLKELLKT 147 (148)
T ss_dssp TCCSSSEEEEECTTSBEEEESC--CHHHHHHHHHHHC--
T ss_pred CCCCcCEEEEECCCCeEEEecC--CHHHHHHHHHHHHcc
Confidence 9999999999977777553332 899999999987753
No 292
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.11 E-value=2.1e-10 Score=99.68 Aligned_cols=140 Identities=19% Similarity=0.292 Sum_probs=94.7
Q ss_pred ChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcC
Q 010804 344 DADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQ 423 (500)
Q Consensus 344 ~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~ 423 (500)
....+.+|+..+.+|.+..............-.+..++++.+.-.- -.++.++|+||++||++|+...+.+.++...++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~-~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 90 (186)
T 1jfu_A 12 AAVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLSD-FRGKTLLVNLWATWCVPCRKEMPALDELQGKLS 90 (186)
T ss_dssp HHHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHHH-cCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc
Confidence 3557788888899998877665333211111112223333332111 247899999999999999999999999999987
Q ss_pred CCCceEEEEEeCCCCCCC-----CCCCCc-----------------------CcceEEEEEcCCCceE-EecCCCC--HH
Q 010804 424 NDADVVIAKFDATANDIP-----GDTFEV-----------------------QGYPTVFFRSASGKTV-PYEGDRT--KE 472 (500)
Q Consensus 424 ~~~~~~~~~id~~~~~~~-----~~~~~i-----------------------~~~P~~~~~~~~~~~~-~~~g~~~--~~ 472 (500)
. .++.++.|+++..+.. .+++++ .++|+++++++++++. ++.|..+ .+
T Consensus 91 ~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~ 169 (186)
T 1jfu_A 91 G-PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASE 169 (186)
T ss_dssp B-TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSH
T ss_pred c-CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHH
Confidence 3 2688888888754211 112333 3899999998777754 7778764 78
Q ss_pred HHHHHHHhhcCCC
Q 010804 473 DIVDFIENNRDKA 485 (500)
Q Consensus 473 ~l~~~i~~~~~~~ 485 (500)
++.++|++.++++
T Consensus 170 ~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 170 DALKLIRAATGKA 182 (186)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHhccc
Confidence 9999999887654
No 293
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.11 E-value=3.2e-10 Score=93.84 Aligned_cols=100 Identities=13% Similarity=0.244 Sum_probs=73.5
Q ss_pred EcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-------------------
Q 010804 35 TLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA------------------- 95 (500)
Q Consensus 35 ~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------- 95 (500)
.++.+.+...-.++++++|.||++||++|+...|.+.++++++.+.+ +.+..|+++...
T Consensus 19 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (143)
T 4fo5_A 19 LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDK--IAMCSISMDEKESIFTETVKIDKLDLSTQFH 96 (143)
T ss_dssp -----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTT--EEEEEEECCSCHHHHHHHHHHHTCCGGGEEE
T ss_pred cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCC--EEEEEEEccCCHHHHHHHHHHhCCCCceeee
Confidence 44444444443478999999999999999999999999999987543 888888776422
Q ss_pred -----hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 96 -----NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 96 -----~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
...+++.|+|.++|+.++++.+|+...+.. ..+++.+.+.+
T Consensus 97 d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 142 (143)
T 4fo5_A 97 EGLGKESELYKKYDLRKGFKNFLINDEGVIIAANV---TPEKLTEILKA 142 (143)
T ss_dssp CTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEESC---CHHHHHHHHTC
T ss_pred cccccchHHHHHcCCCCCCcEEEECCCCEEEEccC---CHHHHHHHHHh
Confidence 124889999999999999998778766544 35666666643
No 294
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.10 E-value=2.1e-10 Score=96.07 Aligned_cols=95 Identities=23% Similarity=0.421 Sum_probs=77.4
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-----------------------CCCCCCCCCCcC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-----------------------ANDIPGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-----------------------~~~~~~~~~~i~ 448 (500)
.+++++|+||++||++|+...+.+.++...++.. ++.++.++.+ .+..+.+.|++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 4789999999999999999999999999998753 5788777643 233345568899
Q ss_pred cceEEEEEcCCCc-eEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 449 GYPTVFFRSASGK-TVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 449 ~~P~~~~~~~~~~-~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
++|++++++++++ ..++.|..+.++|.++|++.+.+..+
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 106 VYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp SSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCSS
T ss_pred ccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhhh
Confidence 9999999976666 55788999999999999998876543
No 295
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.09 E-value=1.7e-10 Score=85.64 Aligned_cols=75 Identities=19% Similarity=0.345 Sum_probs=61.6
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHH
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREAD 131 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~ 131 (500)
++.||++||++|+.+.|.+++++..+ +..||++.++. ++++||++ +|++++ .+| +.+. |..+.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~~~--l~~~~g~~-vPtl~~-~~G-~~v~---g~~~~~ 66 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDDAA--LESAYGLR-VPVLRD-PMG-RELD---WPFDAP 66 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTCHH--HHHHHTTT-CSEEEC-TTC-CEEE---SCCCHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCCHH--HHHHhCCC-cCeEEE-ECC-EEEe---CCCCHH
Confidence 78999999999999999988764331 67899998887 99999998 999988 554 5543 889999
Q ss_pred HHHHHHHhhcC
Q 010804 132 GIVEYLKKQSG 142 (500)
Q Consensus 132 ~l~~~i~~~~~ 142 (500)
.|.+++.+.+.
T Consensus 67 ~L~~~l~~~~~ 77 (87)
T 1ttz_A 67 RLRAWLDAAPH 77 (87)
T ss_dssp HHHHHHHTCC-
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 296
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.09 E-value=4.7e-11 Score=88.62 Aligned_cols=77 Identities=8% Similarity=0.122 Sum_probs=61.8
Q ss_pred EEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHH
Q 010804 397 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVD 476 (500)
Q Consensus 397 ~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~ 476 (500)
+++||++||++|+.+.|.|.+++..+ +..+|++.++...++|+++ +|++++ .+ ++.+. |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~-G~~v~--g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PM-GRELD--WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TT-CCEEE--SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-EC-CEEEe--CCCCHHHHHH
Confidence 68899999999999999998875332 6789999998888889998 999988 44 44332 8899999999
Q ss_pred HHHhhcCCC
Q 010804 477 FIENNRDKA 485 (500)
Q Consensus 477 ~i~~~~~~~ 485 (500)
+|++.+...
T Consensus 71 ~l~~~~~~~ 79 (87)
T 1ttz_A 71 WLDAAPHAL 79 (87)
T ss_dssp HHHTCC---
T ss_pred HHHHHHHHH
Confidence 998876543
No 297
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.09 E-value=3e-10 Score=93.06 Aligned_cols=88 Identities=30% Similarity=0.482 Sum_probs=72.3
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----------------------------CCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA----------------------------NDIPGD 443 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~----------------------------~~~~~~ 443 (500)
.+++++|+||++||++|+...+.+.++...++. ++.++.++... +..+.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 478999999999999999999999999988654 68888885432 222345
Q ss_pred CCCcCcceEEEEEcCCCce-EEecCCCCHHHHHHHHHhh
Q 010804 444 TFEVQGYPTVFFRSASGKT-VPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 444 ~~~i~~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~ 481 (500)
.|++.++|+++++++++++ .++.|..+.+++.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 6899999999999766664 4788999999999999864
No 298
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.09 E-value=2.3e-10 Score=95.82 Aligned_cols=93 Identities=22% Similarity=0.405 Sum_probs=74.2
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-------------------------CCCCCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-------------------------NDIPGDTFE 446 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-------------------------~~~~~~~~~ 446 (500)
.++.++|+||++||++|+...|.+.++...++.. ++.++.|+++. +..+.+.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 4689999999999999999999999999998753 69999999886 234456799
Q ss_pred cCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcCCCCC
Q 010804 447 VQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 447 i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 487 (500)
+.++|++++++++|++.... .+.+++.++|++.++...+
T Consensus 107 v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~l~~~~~~ 145 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVAKE--LRGDDLYNTVEKFVNGAKE 145 (152)
T ss_dssp CCSSCEEEEECTTSEEEEEC--CCTTHHHHHHHHHHTSSSS
T ss_pred CCcCCeEEEECCCCeEEEee--CCHHHHHHHHHHHHhhccc
Confidence 99999999997777755322 3457888888887766543
No 299
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.08 E-value=6.4e-11 Score=98.63 Aligned_cols=90 Identities=17% Similarity=0.281 Sum_probs=75.6
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCC-------------------------CCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDI-------------------------PGDTFE 446 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-------------------------~~~~~~ 446 (500)
.++.++|+||++||++|+...|.+.++...++.. ++.++.++++.+.. +.+.|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 4789999999999999999999999999999753 69999999986654 566789
Q ss_pred cCcceEEEEEcCCCce-EEecCCCCHHHHHHHHHhhc
Q 010804 447 VQGYPTVFFRSASGKT-VPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 447 i~~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~~ 482 (500)
+.++|+++++++++++ .++.|..+.+++++.+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 9999999999777774 47778877888888777654
No 300
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.07 E-value=1.2e-09 Score=92.62 Aligned_cols=108 Identities=13% Similarity=0.207 Sum_probs=84.6
Q ss_pred EEcCccChhhhhccCCeEEEEEECCCChh-hhhhhHHHHHHHHHhcCC--CCCeEEEEEecChh----------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFYAPWCGH-CKKLAPEYEKAASELSSH--DPPVVLAKVDANEE---------------- 94 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~~~~c~~-C~~~~~~~~~~~~~~~~~--~~~v~~~~vd~~~~---------------- 94 (500)
...+.+.+...--++++++|.||++||++ |....|.+.++++++.+. ..++.++.|+++.+
T Consensus 9 ~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~ 88 (164)
T 2ggt_A 9 TTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSP 88 (164)
T ss_dssp EETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCS
T ss_pred EeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 33444444433346899999999999997 999999999999999751 12488888887642
Q ss_pred ----------hhHHHHHhcCccccc---------------EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 95 ----------ANKELASQYEIRGFP---------------TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 95 ----------~~~~~~~~~~i~~~P---------------~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
....+++.|++...| ++++++.+|+....+.|..+.+.+.+.|.+.+
T Consensus 89 ~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 89 KLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp SCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred CeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 122488899999999 88999888899999999999999999988765
No 301
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.07 E-value=2.8e-10 Score=95.23 Aligned_cols=95 Identities=24% Similarity=0.489 Sum_probs=75.6
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC----------------------CCCCCCCcCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND----------------------IPGDTFEVQG 449 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~----------------------~~~~~~~i~~ 449 (500)
.++.++|+||++||++|+...+.+.++...+... ++.++.++++.+. .+.+.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999753 5888888887643 3345689999
Q ss_pred ceEEEEEcCCCceE-EecCC--CCHHHHHHHHHhhcCCCCC
Q 010804 450 YPTVFFRSASGKTV-PYEGD--RTKEDIVDFIENNRDKAAP 487 (500)
Q Consensus 450 ~P~~~~~~~~~~~~-~~~g~--~~~~~l~~~i~~~~~~~~~ 487 (500)
+|+++++++++++. ++.|. .+.++|.++|++..+....
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC----
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccc
Confidence 99999997777744 67775 4569999999998876543
No 302
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.06 E-value=5.1e-10 Score=92.47 Aligned_cols=86 Identities=10% Similarity=0.228 Sum_probs=69.6
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHH---HHHHcCCCCceEEEEEeCCCCCC------------------------CCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDE---VAVSYQNDADVVIAKFDATANDI------------------------PGDT 444 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~---~~~~~~~~~~~~~~~id~~~~~~------------------------~~~~ 444 (500)
.++.++|+||++||++|+...|.+.+ +...++. .++.++.|+.+.+.. ..+.
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~-~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA-KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT-TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc-CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 36899999999999999999999999 8988865 379999999876521 2567
Q ss_pred CCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHh
Q 010804 445 FEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIEN 480 (500)
Q Consensus 445 ~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 480 (500)
|++.++|++++++++++++... .+.+++.++|++
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~e 142 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTVLLKD--ATLQKVEQYLAE 142 (142)
T ss_dssp SCCTTCSEEEEECTTCBEEEEE--ECHHHHHHHHHC
T ss_pred cCCCcCCeEEEECCCCcEEecC--CCHHHHHHHHhC
Confidence 9999999999998888755322 257889988864
No 303
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.06 E-value=2.3e-10 Score=99.10 Aligned_cols=91 Identities=14% Similarity=0.253 Sum_probs=72.9
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCce------EEEEEeCCC-CCCCCCC--------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV------VIAKFDATA-NDIPGDT-------------------- 444 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~------~~~~id~~~-~~~~~~~-------------------- 444 (500)
.++.++|+||++||++|+...|.|.++...++.. ++ .|+.|+++. +....+.
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4689999999999999999999999999988642 35 999999987 3222111
Q ss_pred -----CCcCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 445 -----FEVQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 445 -----~~i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
|++.++|+++++++++++. ++.|..+.++|.++|++.+.
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 2578999998987777754 78899999999999998764
No 304
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.06 E-value=1.3e-09 Score=93.00 Aligned_cols=108 Identities=10% Similarity=0.192 Sum_probs=83.2
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHH-h
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELAS-Q 102 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~-~ 102 (500)
+..++.+.+...-.++++++|.||++||++|....|.+.++++++.+.+ +.++.|+++. ..-.++++ +
T Consensus 17 l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
T 2p5q_A 17 VKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQG--LEILAFPCNQFGEEEPGTNDQITDFVCTR 94 (170)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCTTTTCCCSCHHHHHHHHHHH
T ss_pred EEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCC--EEEEEEECCCCCCCCCCCHHHHHHHHHHh
Confidence 4445555555444578999999999999999999999999999997643 8888998752 11122444 3
Q ss_pred c-----------------------------Cc--cccc---EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 103 Y-----------------------------EI--RGFP---TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 103 ~-----------------------------~i--~~~P---~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+ ++ .++| +.++++.+|+...++.|..+.+.+.+.|.+.+.
T Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 95 FKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred cCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 3 34 5678 899998888999999999999999999988764
No 305
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.06 E-value=6.9e-11 Score=90.79 Aligned_cols=78 Identities=12% Similarity=0.166 Sum_probs=66.3
Q ss_pred CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHH
Q 010804 394 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKED 473 (500)
Q Consensus 394 ~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~ 473 (500)
...+++|+++||++|+.+.+.|.+++..++ +.|..+|++.++...++|+++ +|++++|..| +.+ ..|..+.+.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG-~~v-~~g~~~~~~ 101 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEHLTRLYNDR-VPVLFAVNED-KEL-CHYFLDSDV 101 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHHHHHHSTTS-CSEEEETTTT-EEE-ECSSCCCHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHHHHHHhCCC-CceEEEEECC-EEE-EecCCCHHH
Confidence 356899999999999999999999988763 788899999988888789987 9999999654 433 458899999
Q ss_pred HHHHH
Q 010804 474 IVDFI 478 (500)
Q Consensus 474 l~~~i 478 (500)
|.+||
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
No 306
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.06 E-value=5.3e-11 Score=108.88 Aligned_cols=85 Identities=19% Similarity=0.366 Sum_probs=63.9
Q ss_pred hhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh----hhhHHHHHhcCcccccEEEEEec
Q 010804 41 FSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE----EANKELASQYEIRGFPTIKILRN 116 (500)
Q Consensus 41 ~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~----~~~~~~~~~~~i~~~P~~~~~~~ 116 (500)
+.+.+++.. +++||++||+||+++.|.|+++++++. .+||+. +...++|++++|+++||+++ +
T Consensus 192 la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~---------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~ 258 (291)
T 3kp9_A 192 LAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII--N 258 (291)
T ss_dssp HHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--T
T ss_pred HHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC---------EEEEeecCchhhHHHHHHHcCCcccCeEEE--C
Confidence 444454444 699999999999999999999886641 455552 11234999999999999655 4
Q ss_pred CCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 117 GGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 117 ~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
| + +|.|.++.+++.+|+....+
T Consensus 259 G-~---~~~G~~~~~~L~~~l~~~~~ 280 (291)
T 3kp9_A 259 G-R---TYTGVRSLEALAVASGYPLE 280 (291)
T ss_dssp T-E---EEESCCCHHHHHHHTCCCC-
T ss_pred C-E---EecCCCCHHHHHHHHCCCCc
Confidence 4 4 49999999999999876543
No 307
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.05 E-value=1.1e-09 Score=97.49 Aligned_cols=109 Identities=11% Similarity=0.166 Sum_probs=82.4
Q ss_pred ceEEcCccChhhhhccCC-eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh-----------------
Q 010804 32 FVLTLDHSNFSDTVSKHN-FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE----------------- 93 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~-~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~----------------- 93 (500)
.+..++.+.+...--.++ +++|.||++||++|+...|.+.++++++.+.+ +.++.|+++.
T Consensus 42 ~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Vs~d~~~~~~~d~~~~~~~~~~ 119 (218)
T 3u5r_E 42 VLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQG--LAVVAINSNDAQAFPEETLERVGAEVK 119 (218)
T ss_dssp CEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTT--EEEEEEECSCTTTCGGGSHHHHHHHHH
T ss_pred EeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECCcccccccCCHHHHHHHHH
Confidence 345556555555444667 59999999999999999999999999997654 8888888841
Q ss_pred ----------hhhHHHHHhcCcccccEEEEEecCCceeeec---------CCCCCHHHHHHHHHhhcC
Q 010804 94 ----------EANKELASQYEIRGFPTIKILRNGGKTIQEY---------KGPREADGIVEYLKKQSG 142 (500)
Q Consensus 94 ----------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~---------~g~~~~~~l~~~i~~~~~ 142 (500)
+....+++.|++.++|++++++.+|+...+. .+..+.+.|.+.|.+.+.
T Consensus 120 ~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 120 AYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred HhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 1123499999999999999998877775431 123557888888887764
No 308
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.05 E-value=2.1e-10 Score=97.88 Aligned_cols=98 Identities=21% Similarity=0.379 Sum_probs=73.9
Q ss_pred eccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-----------------------C
Q 010804 381 VADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-----------------------A 437 (500)
Q Consensus 381 ~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-----------------------~ 437 (500)
+++.+.......+++++|+||++||++|+.+.|.+.++... ++.++.++++ .
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~ 113 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDG 113 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEET
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECc
Confidence 44444333224688999999999999999999999998875 3666666643 2
Q ss_pred CCCCCCCCCcCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 438 NDIPGDTFEVQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 438 ~~~~~~~~~i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
+..+.+.|++.++|+++++.+++++. ++.|..+.+.+.++|++.+.
T Consensus 114 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 114 DGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp TCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred chHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 33345568899999888887777744 78899999999999987764
No 309
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.04 E-value=6.1e-11 Score=100.17 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=64.2
Q ss_pred eccchhhhhhcCCCeEEEEEECCCChhHhhhhH-HH--HHHHHHcCCCCceEEEEEeCCCCCCCCCCC--------CcCc
Q 010804 381 VADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAP-IL--DEVAVSYQNDADVVIAKFDATANDIPGDTF--------EVQG 449 (500)
Q Consensus 381 ~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~-~~--~~~~~~~~~~~~~~~~~id~~~~~~~~~~~--------~i~~ 449 (500)
..+.|.... ..+++++|.||++||++|+.+.+ .| .+++..++. ++.++++|.+.++.+.+.| ++.+
T Consensus 28 ~~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 28 GEEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp SHHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCCCC
Confidence 345565544 66899999999999999999998 33 466666654 6999999999887777667 8999
Q ss_pred ceEEEEEcCCCceE
Q 010804 450 YPTVFFRSASGKTV 463 (500)
Q Consensus 450 ~P~~~~~~~~~~~~ 463 (500)
+|+++++.++++++
T Consensus 105 ~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 105 WPLNIIMTPGKKPF 118 (173)
T ss_dssp SSEEEEECTTSCEE
T ss_pred CcceeeECCCCCce
Confidence 99999998677754
No 310
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.04 E-value=6.4e-10 Score=93.25 Aligned_cols=94 Identities=19% Similarity=0.451 Sum_probs=74.2
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-----------------------CCCCCCCCcC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-----------------------DIPGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-----------------------~~~~~~~~i~ 448 (500)
.++.++|+||++||++|+...+.+.++...+... ++.++.++++.+ ..+.+.|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 4689999999999999999999999999999753 688998988865 2244568899
Q ss_pred cceEEEEEcCCCceE-EecCCC--CHHHHHHHHHhhcCCCC
Q 010804 449 GYPTVFFRSASGKTV-PYEGDR--TKEDIVDFIENNRDKAA 486 (500)
Q Consensus 449 ~~P~~~~~~~~~~~~-~~~g~~--~~~~l~~~i~~~~~~~~ 486 (500)
++|+++++++++++. ++.|.. +.+++.++|++......
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~ 146 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKAR 146 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-----
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHhh
Confidence 999999997777754 677765 67899999988765543
No 311
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.04 E-value=8.9e-11 Score=102.25 Aligned_cols=116 Identities=20% Similarity=0.398 Sum_probs=85.0
Q ss_pred hhhHHhhcCCCCCCCceEEEEeCCCCcc-CC-CCCChhhHHHHHHHHhcCCCCCccccCCCCCCCCCCeEEEeccchhhh
Q 010804 311 SQGAFQYFGLQESQVPLIVIQTNDGQKY-LK-PNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDM 388 (500)
Q Consensus 311 ~~~~~~~~gi~~~~~P~i~i~~~~~~~y-~~-~~~~~~~i~~fi~~~~~G~l~~~~~s~~~~~~~~~~~~~l~~~~~~~~ 388 (500)
.....+.+|++ ++|++++ ++ +| .. +.++.+++..|++++++ +.++++|+++|..... ...+.++..+
T Consensus 39 ~~~~a~~~gi~--gvP~fvi---ng-k~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l 107 (197)
T 1un2_A 39 QEKAAADVQLR--GVPAMFV---NG-KYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTL 107 (197)
T ss_dssp HHHHHHHTTCC--SSSEEEE---TT-TEEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEEC
T ss_pred HHHHHHHcCCC--cCCEEEE---cc-eEecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEc
Confidence 34556789998 7999977 33 45 44 46777889999999998 8889999988864332 2356667665
Q ss_pred hh-cCCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCCCC
Q 010804 389 VF-NSGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATAND 439 (500)
Q Consensus 389 ~~-~~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~~~ 439 (500)
.. ...++++|.||+.||++|+.+.|.+ .++.+.+.+ ++.|.+++++.+.
T Consensus 108 ~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~~ 160 (197)
T 1un2_A 108 EKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFMG 160 (197)
T ss_dssp SSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSSS
T ss_pred cCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcCC
Confidence 42 3467899999999999999999999 998888865 6999999998764
No 312
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.03 E-value=2e-09 Score=91.95 Aligned_cols=110 Identities=15% Similarity=0.249 Sum_probs=85.5
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChh-hhhhhHHHHHHHHHhcCC--CCCeEEEEEecChh---------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGH-CKKLAPEYEKAASELSSH--DPPVVLAKVDANEE--------------- 94 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~-C~~~~~~~~~~~~~~~~~--~~~v~~~~vd~~~~--------------- 94 (500)
+...+.+.+...--++++++|.||++||++ |....|.+.++++++.+. ..++.++.|+++.+
T Consensus 11 l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~ 90 (171)
T 2rli_A 11 LLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFH 90 (171)
T ss_dssp EEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTC
T ss_pred EEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcC
Confidence 334444444433346889999999999998 999999999999999641 23488888887631
Q ss_pred -----------hhHHHHHhcCccccc---------------EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 95 -----------ANKELASQYEIRGFP---------------TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 95 -----------~~~~~~~~~~i~~~P---------------~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
....+++.|++...| ++++++.+|+....+.|..+.+.+.+.|.+.+.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 91 PRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp TTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 112488899999888 889998888998999999999999999987653
No 313
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.03 E-value=4.5e-10 Score=95.46 Aligned_cols=88 Identities=20% Similarity=0.419 Sum_probs=73.8
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC------------------CC---------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT------------------AN--------------- 438 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~------------------~~--------------- 438 (500)
.++.++|+||++||++|+...|.+.++...++ ++.|+.|+++ .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999987 5899999887 22
Q ss_pred -------CCCCCCCCcCcceEEEEEcCCCceEEecCCC-CHHHHHHHHHhhcC
Q 010804 439 -------DIPGDTFEVQGYPTVFFRSASGKTVPYEGDR-TKEDIVDFIENNRD 483 (500)
Q Consensus 439 -------~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~-~~~~l~~~i~~~~~ 483 (500)
..+.+.|++.++|+++++++++++.. .|.. +.++|.++|++.++
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC--
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHhc
Confidence 13345688999999999988888666 8888 99999999988754
No 314
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.03 E-value=1e-09 Score=93.83 Aligned_cols=106 Identities=13% Similarity=0.186 Sum_probs=80.1
Q ss_pred EEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHH----
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELA---- 100 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~---- 100 (500)
..++.+.+...-.++++++|.||++||++|+ ..|.+.++++++.+.+ +.+..|+++. +...+++
T Consensus 18 ~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~ 94 (171)
T 3cmi_A 18 VDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEG--FTIIGFPCNQFGHQEPGSDEEIAQFCQLNY 94 (171)
T ss_dssp BBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGT--EEEEEEEECSCC------------------
T ss_pred EcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCC--eEEEEEECcccCCCCCCCHHHHHHHHHhcc
Confidence 3445555544444789999999999999999 9999999999998644 8888887741 1111122
Q ss_pred --------------------------HhcCccccc------EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 101 --------------------------SQYEIRGFP------TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 101 --------------------------~~~~i~~~P------~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+.|++.++| +.++++.+|+...++.|..+.+.+.+.|.+.+.
T Consensus 95 ~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 95 GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 246788999 889998888999999999999999999887664
No 315
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.02 E-value=1.7e-09 Score=93.42 Aligned_cols=107 Identities=11% Similarity=0.133 Sum_probs=82.0
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHHh-
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELASQ- 102 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~~- 102 (500)
+..++.+.+...--++++++|.||++||++|....|.+.++++++.+.+ +.+..|+++. ..-.+++++
T Consensus 34 l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--v~vv~vs~d~~~~~e~~~~~~~~~~~~~~ 111 (181)
T 2p31_A 34 AVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHH--FNVLAFPCNQFGQQEPDSNKEIESFARRT 111 (181)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred eecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCC--EEEEEEECcCCCCCCCCCHHHHHHHHHhh
Confidence 4455555555444578999999999999999999999999999998654 8888888753 111224443
Q ss_pred -----------------------cCccccc-------EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 103 -----------------------YEIRGFP-------TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 103 -----------------------~~i~~~P-------~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+++.++| +.++++.+|+...++.|..+.+.|.+.|.+.+
T Consensus 112 ~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 112 YSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp HCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 2255678 88888888899999999999999999988764
No 316
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.02 E-value=1.1e-09 Score=92.38 Aligned_cols=91 Identities=21% Similarity=0.486 Sum_probs=74.7
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-------------------CCCCCCCCCcCcceE
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-------------------NDIPGDTFEVQGYPT 452 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-------------------~~~~~~~~~i~~~P~ 452 (500)
.++.++|+||++||++|+...+.+.++...+... ++.++.++++. +..+.+.|++.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 4689999999999999999999999999999743 79999999987 344556799999999
Q ss_pred EEEEcCCCceE-EecCC--CCHHHHHHHHHhhcC
Q 010804 453 VFFRSASGKTV-PYEGD--RTKEDIVDFIENNRD 483 (500)
Q Consensus 453 ~~~~~~~~~~~-~~~g~--~~~~~l~~~i~~~~~ 483 (500)
++++++++++. ++.|. .+.+++++.+.++..
T Consensus 119 ~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred EEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 99998777754 67776 557888888876543
No 317
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.01 E-value=2.4e-09 Score=90.47 Aligned_cols=93 Identities=17% Similarity=0.202 Sum_probs=73.3
Q ss_pred eEEcCccChhhhhccCCe-EEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNF-IVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE---------------- 94 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~-~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---------------- 94 (500)
+..++.+.+...--.+++ ++|.|| ++||++|....|.+.++++++.+.+ +.++.|+++..
T Consensus 13 l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~ 90 (161)
T 3drn_A 13 GIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD--VVVIGVSSDDINSHKRFKEKYKLPFIL 90 (161)
T ss_dssp EEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC--EEEEEEESCCHHHHHHHHHHTTCCSEE
T ss_pred eecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHHHHHHHHHHhCCCceE
Confidence 444555544443336676 999999 9999999999999999999998654 88888887621
Q ss_pred ---hhHHHHHhcCccc----ccEEEEEecCCceeeecCCC
Q 010804 95 ---ANKELASQYEIRG----FPTIKILRNGGKTIQEYKGP 127 (500)
Q Consensus 95 ---~~~~~~~~~~i~~----~P~~~~~~~~~~~~~~~~g~ 127 (500)
....++++|++.+ +|++++++.+|+....+.|.
T Consensus 91 ~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 91 VSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp EECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECS
T ss_pred EECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecC
Confidence 2234899999999 99999999888998889884
No 318
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.01 E-value=2.3e-09 Score=91.38 Aligned_cols=107 Identities=13% Similarity=0.155 Sum_probs=80.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHH-Hh
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELA-SQ 102 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~-~~ 102 (500)
+..++.+.+...-.++++++|.||++||++|....|.+.++++++.+.+ +.++.|+++. ....+++ ++
T Consensus 16 l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 93 (169)
T 2v1m_A 16 VKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKG--LRILAFPCNQFGGQEPWAEAEIKKFVTEK 93 (169)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred eecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCC--eEEEEEECCccCCCCCCCHHHHHHHHHHh
Confidence 4445555555444578999999999999999999999999999997643 8888888753 1111232 32
Q ss_pred c-----------------------------C-----cccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 103 Y-----------------------------E-----IRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 103 ~-----------------------------~-----i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+ + |+++|+.++++.+|+...++.|..+.+.+.+.|.+.+
T Consensus 94 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 94 YGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp HCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 2 3 3445899999988899999999988889988888765
No 319
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.00 E-value=2.7e-09 Score=92.90 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=82.8
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHH-Hh
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELA-SQ 102 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~-~~ 102 (500)
+..++.+.+...-.++++++|.||++||++|....|.+.++++++.+.+ +.++.|+++. ....+++ ++
T Consensus 33 l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 110 (190)
T 2vup_A 33 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPCNQFGGQEPGNEEEIKEFVCTK 110 (190)
T ss_dssp CBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred EEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCC--eEEEEEEcCccCCCCCCCHHHHHHHHHHh
Confidence 3445555554444478999999999999999999999999999998644 8888888762 1112233 22
Q ss_pred -----------------------------cCccccc------EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 103 -----------------------------YEIRGFP------TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 103 -----------------------------~~i~~~P------~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+++.++| +.++++.+|+...++.|..+.+.+.+.|.+.+.
T Consensus 111 ~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 111 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp HCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 4778889 888998888999999999999999999987653
No 320
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.99 E-value=1.5e-09 Score=94.24 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=81.9
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh------hhhHHHHH----h
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------EANKELAS----Q 102 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------~~~~~~~~----~ 102 (500)
+..++.+.+...--+++++||.||++||++|....|.+.++++++++.+ +.+..|+++. +...++.+ +
T Consensus 31 l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~~~~e~~~~~~~~~~~~~~ 108 (187)
T 3dwv_A 31 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPSNQFGGQEPGNEEEIKEFVCTK 108 (187)
T ss_dssp CBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGT--CEEEEEEBCCCSSCSSSBTTHHHHSCCBC
T ss_pred EEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCC--eEEEEEECcccCCCCCCCHHHHHHHHHhc
Confidence 4456666555555578999999999999999999999999999998754 7777777652 11111221 1
Q ss_pred --------------------------------cCccccc---EEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 103 --------------------------------YEIRGFP---TIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 103 --------------------------------~~i~~~P---~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
+++..+| +.++++.+|+....+.|..+.+.|.+.|.+.+.
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 109 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred cCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 2344667 999998888999999999999999999998775
No 321
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.53 E-value=4.9e-11 Score=98.72 Aligned_cols=77 Identities=26% Similarity=0.539 Sum_probs=61.9
Q ss_pred cCC-eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------------hHHHHHh
Q 010804 47 KHN-FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA-----------------------NKELASQ 102 (500)
Q Consensus 47 ~~~-~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~~~ 102 (500)
+++ +++|+||++||++|+...|.+.+++++++..+.++.++.|+++... ...++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 566 9999999999999999999999999998543344777777776542 1248999
Q ss_pred cCcccccEEEEEecCCceeee
Q 010804 103 YEIRGFPTIKILRNGGKTIQE 123 (500)
Q Consensus 103 ~~i~~~P~~~~~~~~~~~~~~ 123 (500)
|+|.++|++++++.+|+....
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~ 124 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISM 124 (143)
Confidence 999999999999976666544
No 322
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.98 E-value=6.5e-10 Score=95.13 Aligned_cols=105 Identities=15% Similarity=0.220 Sum_probs=79.9
Q ss_pred EEcCccChhhhhccCCeEEEEEECCCChh-hhhhhHHHHHHHHHhcCCC-CCeEEEEEecChhh---h------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFYAPWCGH-CKKLAPEYEKAASELSSHD-PPVVLAKVDANEEA---N------------ 96 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~~~~c~~-C~~~~~~~~~~~~~~~~~~-~~v~~~~vd~~~~~---~------------ 96 (500)
..++. .+...--++++++|.||++||++ |....|.+.++++++.+.+ .++.++.|+++.+. .
T Consensus 22 ~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~ 100 (172)
T 2k6v_A 22 EGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPS 100 (172)
T ss_dssp ECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTT
T ss_pred EcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCC
Confidence 33443 33333347889999999999997 9999999999999887421 24889999886421 0
Q ss_pred -----------HHHHHhcC---------------cccccEEEEEecCCceeeecCCCC--CHHHHHHHHHhh
Q 010804 97 -----------KELASQYE---------------IRGFPTIKILRNGGKTIQEYKGPR--EADGIVEYLKKQ 140 (500)
Q Consensus 97 -----------~~~~~~~~---------------i~~~P~~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~ 140 (500)
..++++|+ +.++|++++++ +|+....+.|.. +.+.|.+.|++.
T Consensus 101 ~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 101 FLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp EEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred cEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 23666665 46789999999 889889999987 899999988764
No 323
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.98 E-value=4e-09 Score=90.89 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=82.1
Q ss_pred ceEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHHh
Q 010804 32 FVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELASQ 102 (500)
Q Consensus 32 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~~ 102 (500)
.+..++.+.+...-.++++++|.||++||++|....|.+.++++++.+.+ +.+..|+++. +.-.+++++
T Consensus 22 ~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 22 EVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSH--FSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTS--EEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred EEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCC--eEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 34556666665555578999999999999999999999999999998654 8888887653 222336666
Q ss_pred -cCcc--------------------------cccE----EEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 103 -YEIR--------------------------GFPT----IKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 103 -~~i~--------------------------~~P~----~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+++. ++|+ .++++.+|+....+.|..+.+.+.+.|.+.+
T Consensus 100 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 100 NYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp HHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred hcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 5432 2576 7888888899999999988888877777655
No 324
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.96 E-value=8.2e-10 Score=92.77 Aligned_cols=88 Identities=22% Similarity=0.416 Sum_probs=70.6
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-----------------------CCCCCCCCCcC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-----------------------NDIPGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-----------------------~~~~~~~~~i~ 448 (500)
.+++++|+||++||++|+.+.|.+.++... .++.++.++++. +..+.+.|++.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC
Confidence 378999999999999999999999998765 258888877643 22334568999
Q ss_pred cceEEEEEcCCCce-EEecCCCCHHHHHHHHHhhcC
Q 010804 449 GYPTVFFRSASGKT-VPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 449 ~~P~~~~~~~~~~~-~~~~g~~~~~~l~~~i~~~~~ 483 (500)
++|+++++.+++++ .++.|..+.+++.++|++.++
T Consensus 117 ~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred ccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 99988888766664 478899999999999988764
No 325
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.94 E-value=6.4e-09 Score=91.64 Aligned_cols=107 Identities=12% Similarity=0.079 Sum_probs=80.2
Q ss_pred eEEcC-ccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHH-
Q 010804 33 VLTLD-HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELAS- 101 (500)
Q Consensus 33 v~~l~-~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~- 101 (500)
+..++ .+.+...--+++++||.||++||++|....|.+.++++++++.+ +.+..|+++. ....++++
T Consensus 31 l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g--~~vv~v~~d~~~~~e~d~~~~i~~f~~~ 108 (208)
T 2f8a_A 31 ARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRG--LVVLGFPCNQFGHQENAKNEEILNSLKY 108 (208)
T ss_dssp ECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTTTCSCHHHHHHHHHH
T ss_pred eeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCC--eEEEEEECCcccccCCCCHHHHHHHHHh
Confidence 33455 44444444578999999999999999999999999999997654 8888898851 11122443
Q ss_pred -----hcC-----------------------------------------------------cccccEEEEEecCCceeee
Q 010804 102 -----QYE-----------------------------------------------------IRGFPTIKILRNGGKTIQE 123 (500)
Q Consensus 102 -----~~~-----------------------------------------------------i~~~P~~~~~~~~~~~~~~ 123 (500)
+++ |...|+.++++.+|+...+
T Consensus 109 ~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 109 VRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRR 188 (208)
T ss_dssp TSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred cccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEE
Confidence 443 3334889999988899999
Q ss_pred cCCCCCHHHHHHHHHhhc
Q 010804 124 YKGPREADGIVEYLKKQS 141 (500)
Q Consensus 124 ~~g~~~~~~l~~~i~~~~ 141 (500)
+.|..+.+.|.+.|.+.+
T Consensus 189 ~~g~~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 189 YSRRFQTIDIEPDIEALL 206 (208)
T ss_dssp ECTTSCGGGGHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHh
Confidence 999999988888887754
No 326
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.93 E-value=5.8e-09 Score=87.97 Aligned_cols=105 Identities=9% Similarity=0.136 Sum_probs=78.4
Q ss_pred eEEcCccChhhhhccCC-eEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh----------------
Q 010804 33 VLTLDHSNFSDTVSKHN-FIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE---------------- 94 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~-~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---------------- 94 (500)
+..++.+.+...--.++ +++|.|| ++||++|....|.+.++++++.+.+ +.++.|+++..
T Consensus 20 l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--~~vv~is~d~~~~~~~~~~~~~~~~~~ 97 (160)
T 1xvw_A 20 LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDD--SAALAISVGPPPTHKIWATQSGFTFPL 97 (160)
T ss_dssp EECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSS--EEEEEEESCCHHHHHHHHHHHTCCSCE
T ss_pred eEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--cEEEEEeCCCHHHHHHHHHhcCCCceE
Confidence 33444444444433566 9999998 9999999999999999999987543 88888887641
Q ss_pred -----hhHHHHHhcCcc----ccc--EEEEEecCCceeeecCCCC----CHHHHHHHHHh
Q 010804 95 -----ANKELASQYEIR----GFP--TIKILRNGGKTIQEYKGPR----EADGIVEYLKK 139 (500)
Q Consensus 95 -----~~~~~~~~~~i~----~~P--~~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~ 139 (500)
+...+++.|++. ++| ++++++.+|+....+.|.. ..+.+.+.+.+
T Consensus 98 ~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 98 LSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred EecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 134489999998 999 8889988889888888864 44566666554
No 327
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=1e-10 Score=98.85 Aligned_cols=104 Identities=17% Similarity=0.336 Sum_probs=72.6
Q ss_pred EcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHH-HHHHhcCCCCCeEEEEEecChhhh--HH-------------
Q 010804 35 TLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEK-AASELSSHDPPVVLAKVDANEEAN--KE------------- 98 (500)
Q Consensus 35 ~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~-~~~~~~~~~~~v~~~~vd~~~~~~--~~------------- 98 (500)
.++.+.+...-.++++++|.||++||++|+...|.+.+ +.+.+.. +.++.++.|+++.... .+
T Consensus 20 ~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 98 (159)
T 2ls5_A 20 LTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD-NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGL 98 (159)
Confidence 34444444443478899999999999999999999998 8888761 1237888888776533 11
Q ss_pred -----HHHhcC--cccccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 99 -----LASQYE--IRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 99 -----~~~~~~--i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
+++.|+ +.++|++++++.+|+....+.| .+.+.+.+++.+.
T Consensus 99 d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 99 DPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQI 146 (159)
Confidence 222333 5679999999877788777777 4555666666543
No 328
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.93 E-value=7.3e-09 Score=89.69 Aligned_cols=106 Identities=15% Similarity=0.098 Sum_probs=78.9
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHHhc
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELASQY 103 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~~~ 103 (500)
+..++.+.+...--++++++|.||++||++|....|.+.++++++++.+ +.+..|+++. +...++++++
T Consensus 34 l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~is~d~~~~~~~~~~~~~~~~~~~~ 111 (185)
T 2gs3_A 34 AKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECG--LRILAFPCNQFGKQEPGSNEEIKEFAAGY 111 (185)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCTTTTCCCSCHHHHHHHHHHT
T ss_pred eEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCC--eEEEEEECcccCCCCCCCHHHHHHHHHHc
Confidence 4455555555444578999999999999999999999999999998644 8888888752 1112344444
Q ss_pred Cc------------------------------------ccccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 104 EI------------------------------------RGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 104 ~i------------------------------------~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
++ +.+|+.++++.+|+...++.|..+.+.|.+.|.+.
T Consensus 112 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 112 NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred CCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 32 12489999988889989999988888887777654
No 329
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.92 E-value=1.3e-09 Score=92.47 Aligned_cols=74 Identities=27% Similarity=0.444 Sum_probs=61.8
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC------------------------CCCCCCCCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN------------------------DIPGDTFEV 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~------------------------~~~~~~~~i 447 (500)
.+++++|+||++||++|+.+.|.+.++++.++...++.++.|+++.. ..+.+.|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 47899999999999999999999999999997644788888888765 234556899
Q ss_pred CcceEEEEEcCC-CceEEe
Q 010804 448 QGYPTVFFRSAS-GKTVPY 465 (500)
Q Consensus 448 ~~~P~~~~~~~~-~~~~~~ 465 (500)
.++|++++++++ ++++..
T Consensus 127 ~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp CSSSEEEEEETTTCCEEES
T ss_pred CCCCEEEEEeCCCCEEEec
Confidence 999999999876 776543
No 330
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.92 E-value=6.6e-09 Score=89.81 Aligned_cols=106 Identities=17% Similarity=0.138 Sum_probs=79.3
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHHhc
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELASQY 103 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~~~ 103 (500)
+..++.+.+...-.++++++|.||++||++|....|.+.++++++.+.+ +.+..|+++. ....++++++
T Consensus 32 l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~e~~~~~~~~~~~~~~ 109 (183)
T 2obi_A 32 AKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECG--LRILAFPCNQFGKQEPGSNEEIKEFAAGY 109 (183)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHHHHHHTT
T ss_pred EEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCC--eEEEEEECCCCCCCCCCCHHHHHHHHHHc
Confidence 4455655555554578999999999999999999999999999998643 8888888752 1111233332
Q ss_pred -------------------------------C-----cccccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 104 -------------------------------E-----IRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 104 -------------------------------~-----i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
+ |..+|++++++.+|+...++.|..+.+.|.+.|.+.
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 110 NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 2 233599999988889989999998888888777654
No 331
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.92 E-value=1.3e-09 Score=95.54 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=74.0
Q ss_pred CC-eEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-----------------------------CCCCC
Q 010804 393 GK-NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-----------------------------NDIPG 442 (500)
Q Consensus 393 ~~-~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-----------------------------~~~~~ 442 (500)
++ +++|+||++||++|+...|.+.++...+++. ++.++.|+++. +..+.
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 44 5999999999999999999999999998653 58888888842 22334
Q ss_pred CCCCcCcceEEEEEcCCCceE-E---------ecCCCCHHHHHHHHHhhcCCC
Q 010804 443 DTFEVQGYPTVFFRSASGKTV-P---------YEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 443 ~~~~i~~~P~~~~~~~~~~~~-~---------~~g~~~~~~l~~~i~~~~~~~ 485 (500)
+.|++.++|+++++++++++. + +.|..+.++|.+.|++.+.+.
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 568899999999998777755 4 357778999999999887654
No 332
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.92 E-value=3.1e-09 Score=92.31 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=73.5
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-----------------------------CCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-----------------------------NDIPG 442 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-----------------------------~~~~~ 442 (500)
.++.++|+||++||++|+...|.+.++...+++. +.++.|+++. +..+.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 3689999999999999999999999999999864 8888888742 22334
Q ss_pred CCCCcCcceEEEEEcCCCceEEe---------cCCCCHHHHHHHHHhhcCCC
Q 010804 443 DTFEVQGYPTVFFRSASGKTVPY---------EGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 443 ~~~~i~~~P~~~~~~~~~~~~~~---------~g~~~~~~l~~~i~~~~~~~ 485 (500)
+.|++.++|+++++++++++... .|..+.++|.+.|++.+.+.
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 56899999999999877775533 12336889999999887654
No 333
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=2.2e-09 Score=89.50 Aligned_cols=90 Identities=19% Similarity=0.327 Sum_probs=72.3
Q ss_pred CCCeEEEEEECCCChh--HhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-------------------------CCCCC
Q 010804 392 SGKNVLLEFYAPWCGH--CKKLAPILDEVAVSYQNDADVVIAKFDATAND-------------------------IPGDT 444 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-------------------------~~~~~ 444 (500)
.++.++|+||++||++ |+...|.+.++...++...++.++.|+++.+. .+.+.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 99999999999999932336999999888652 33456
Q ss_pred CCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 445 FEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 445 ~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
|++.++|++++++++|++.... .+.+++.+.|++.+.
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKN--LRGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEES--CCHHHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEcc--CCHHHHHHHHHHHHh
Confidence 8999999999998777755333 288888888887653
No 334
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.92 E-value=1.7e-09 Score=90.34 Aligned_cols=88 Identities=16% Similarity=0.202 Sum_probs=70.8
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCC-----------------------CCCCCCcC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDI-----------------------PGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-----------------------~~~~~~i~ 448 (500)
.+++++|+||++||++|+...|.+.++...+++. ++.++.|+++.... +.+.|++.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc
Confidence 3689999999999999999999999999999753 69999999876532 44567899
Q ss_pred cceEEEEEcCCCceE-EecCCCCHHHHHHHHHh
Q 010804 449 GYPTVFFRSASGKTV-PYEGDRTKEDIVDFIEN 480 (500)
Q Consensus 449 ~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~ 480 (500)
++|++++++++|++. ++.|..+.++...-+.+
T Consensus 113 ~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSARGENIKDLDEAIKKLLE 145 (152)
T ss_dssp SCSEEEEEETTTEEEEETTTCSCHHHHHHHHHG
T ss_pred cCceEEEECCCCeEEEecCCHHHHHHHHHHHHh
Confidence 999999998777744 77788887766655443
No 335
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.92 E-value=1.2e-09 Score=90.39 Aligned_cols=74 Identities=20% Similarity=0.382 Sum_probs=60.6
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC------------------------CCCCCCCCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN------------------------DIPGDTFEV 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~------------------------~~~~~~~~i 447 (500)
.++.++|+||++||++|+.+.|.+.+++..++...++.++.|+++.+ ..+.+.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 46899999999999999999999999999997434788888888753 123456899
Q ss_pred CcceEEEEEc-CCCceEEe
Q 010804 448 QGYPTVFFRS-ASGKTVPY 465 (500)
Q Consensus 448 ~~~P~~~~~~-~~~~~~~~ 465 (500)
.++|++++++ ++++++..
T Consensus 107 ~~~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNIITT 125 (144)
T ss_dssp CSSSEEEEEETTTCCEEES
T ss_pred CCCCEEEEEECCCCcEEec
Confidence 9999999998 67775543
No 336
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.91 E-value=4.5e-09 Score=91.21 Aligned_cols=93 Identities=17% Similarity=0.254 Sum_probs=76.9
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh-----------------------hhHHHHHh
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE-----------------------ANKELASQ 102 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~~~ 102 (500)
++++++|.|| ++||++|....|.+.++++++.+.+ +.++.|+++.. ....+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLG--VEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcC--CEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 6789999999 9999999999999999999997643 78888887641 12348899
Q ss_pred cCcc------cccEEEEEecCCceeeecCCCC----CHHHHHHHHHhhc
Q 010804 103 YEIR------GFPTIKILRNGGKTIQEYKGPR----EADGIVEYLKKQS 141 (500)
Q Consensus 103 ~~i~------~~P~~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~ 141 (500)
|++. ++|++++++.+|+....+.|.. +.+++.+.|.+..
T Consensus 108 ~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9998 8999999988888888887754 6788888887655
No 337
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.91 E-value=9.4e-10 Score=94.47 Aligned_cols=88 Identities=20% Similarity=0.348 Sum_probs=70.8
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-----------------------CCCCCCCCCcC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-----------------------NDIPGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-----------------------~~~~~~~~~i~ 448 (500)
.++.++|+||++||++|+...|.+.++... ++.++.|+++. +..+.+.|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 378999999999999999999999999876 47777777532 22334458899
Q ss_pred cceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 449 GYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 449 ~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++|+++++++++++. ++.|..+.+.+.++|.+.+.+
T Consensus 132 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 168 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQ 168 (176)
T ss_dssp SSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHH
T ss_pred CCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 999999998777755 788999999999999887654
No 338
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.89 E-value=1.3e-09 Score=90.15 Aligned_cols=99 Identities=10% Similarity=0.109 Sum_probs=73.6
Q ss_pred cchhhhh---hcCCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCCCC--CCCCCCCcCcceEEE
Q 010804 383 DSLQDMV---FNSGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATAND--IPGDTFEVQGYPTVF 454 (500)
Q Consensus 383 ~~~~~~~---~~~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~~~--~~~~~~~i~~~P~~~ 454 (500)
.++++.+ ...+|+++|+||++||..|+.+.... .++...++. ++.++++|.+..+ .+.++|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 3555544 34589999999999999999997644 445555543 6999999996532 234568999999999
Q ss_pred EEcCC-Cc-eEEecCCCCHHHHHHHHHhhcCC
Q 010804 455 FRSAS-GK-TVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 455 ~~~~~-~~-~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+++.. ++ ...+.| .+.++++++|++.+.+
T Consensus 107 fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 107 ILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp EECTTTCCCCEEESS-CCHHHHHHHHHHHHHH
T ss_pred EEeCCCCcEeeecCC-CCHHHHHHHHHHHHHh
Confidence 99764 54 445655 8999999999887644
No 339
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.89 E-value=2.6e-09 Score=101.41 Aligned_cols=91 Identities=16% Similarity=0.302 Sum_probs=75.7
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC---------------------------CCCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA---------------------------NDIPGDT 444 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~---------------------------~~~~~~~ 444 (500)
.+++++|+||++||++|+.+.|.|.++...+++. ++.++.|+++. +..+.+.
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 3789999999999999999999999999998652 68999998753 1233456
Q ss_pred CCcCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 445 FEVQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 445 ~~i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
|++.++|++++++++++++ ++.|..+.+++.++|++.+.
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 8999999999997777744 78898999999999998764
No 340
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.87 E-value=5.5e-09 Score=91.56 Aligned_cols=93 Identities=12% Similarity=0.219 Sum_probs=76.9
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh--------------------------hhHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE--------------------------ANKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~~ 99 (500)
++++++|.|| ++||++|....|.+.++++++.+.+ +.+..|+++.. ....+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKG--FNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 6789999999 9999999999999999999997643 78888877641 12348
Q ss_pred HHhcCcc-----cccEEEEEecCCceeeecCCCC----CHHHHHHHHHhhc
Q 010804 100 ASQYEIR-----GFPTIKILRNGGKTIQEYKGPR----EADGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i~-----~~P~~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~ 141 (500)
++.|++. ++|++++++.+|+....+.|.. +.+++.+.|.+..
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8999999 9999999998888888887764 6788888887654
No 341
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.87 E-value=2.1e-09 Score=89.21 Aligned_cols=74 Identities=23% Similarity=0.385 Sum_probs=60.5
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC------------------------CCCCCCCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND------------------------IPGDTFEV 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~------------------------~~~~~~~i 447 (500)
.++.++|+||++||++|+.+.|.+.+++..++...++.++.|+++... .+.+.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 478999999999999999999999999999974347888888887531 23456899
Q ss_pred CcceEEEEEc-CCCceEEe
Q 010804 448 QGYPTVFFRS-ASGKTVPY 465 (500)
Q Consensus 448 ~~~P~~~~~~-~~~~~~~~ 465 (500)
.++|++++++ ++|+++..
T Consensus 107 ~~~Pt~~lid~~~G~i~~~ 125 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVTT 125 (146)
T ss_dssp CSSSEEEEEETTTCCEEES
T ss_pred CCCCEEEEEECCCCeEEEe
Confidence 9999999998 67765543
No 342
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.87 E-value=7.7e-09 Score=90.35 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=78.4
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh-----------------------hhHHHHHh
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE-----------------------ANKELASQ 102 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~~~ 102 (500)
.+++++|.|| ++||++|....|.+.++++++.+.+ +.++.|+++.. ....+++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD--AQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 5789999999 9999999999999999999997643 88888887641 12348889
Q ss_pred cCcc-----cccEEEEEecCCceeeecCCCC----CHHHHHHHHHhhcC
Q 010804 103 YEIR-----GFPTIKILRNGGKTIQEYKGPR----EADGIVEYLKKQSG 142 (500)
Q Consensus 103 ~~i~-----~~P~~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~~ 142 (500)
|++. ++|++++++.+|+....+.|.. +.+.+.+.|.+...
T Consensus 122 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9999 9999999998888888887764 78899999987764
No 343
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.87 E-value=7.2e-10 Score=88.02 Aligned_cols=89 Identities=17% Similarity=0.319 Sum_probs=62.8
Q ss_pred ChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh---hHHHHHhcCcccccEEEEEec
Q 010804 40 NFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---NKELASQYEIRGFPTIKILRN 116 (500)
Q Consensus 40 ~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~~~i~~~P~~~~~~~ 116 (500)
.++.+++. +.+++ ||++||++|+.+.|.+.++... +.++.||.+.+. ...+++++++.++|++ |.+
T Consensus 12 ~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-------~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~ 80 (116)
T 2e7p_A 12 KAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-------YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIG 80 (116)
T ss_dssp HHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-------CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-------eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34555554 45555 9999999999999988876432 556666655431 1349999999999999 334
Q ss_pred CCceeeecCCCC---CHHHHHHHHHhh
Q 010804 117 GGKTIQEYKGPR---EADGIVEYLKKQ 140 (500)
Q Consensus 117 ~~~~~~~~~g~~---~~~~l~~~i~~~ 140 (500)
|+.+..+.|.. +.+.|.+++.+.
T Consensus 81 -g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 81 -GKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp -TEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred -CEEECChHHHHHHHhCChHHHHHHHc
Confidence 47777777654 667788888764
No 344
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.85 E-value=2.3e-09 Score=88.67 Aligned_cols=75 Identities=27% Similarity=0.497 Sum_probs=60.6
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC------------------------CCCCCCCc
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND------------------------IPGDTFEV 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~------------------------~~~~~~~i 447 (500)
.++.++|+||++||++|+.+.|.+.++++.++...++.++.++++.+. .+.+.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 478999999999999999999999999999874347888888887632 23455789
Q ss_pred CcceEEEEEc-CCCceEEec
Q 010804 448 QGYPTVFFRS-ASGKTVPYE 466 (500)
Q Consensus 448 ~~~P~~~~~~-~~~~~~~~~ 466 (500)
.++|++++++ ++++++...
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEECCCCeEEecc
Confidence 9999999998 677765443
No 345
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.83 E-value=6.9e-09 Score=85.67 Aligned_cols=86 Identities=13% Similarity=0.257 Sum_probs=68.1
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC--------------------------CCCCCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND--------------------------IPGDTF 445 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~--------------------------~~~~~~ 445 (500)
.++.++|+||++||++|+...|.+.++...++.. ++.++.|+++.+. .+.+.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 4689999999999999999999999999999753 7889888887532 112458
Q ss_pred CcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHh
Q 010804 446 EVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIEN 480 (500)
Q Consensus 446 ~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 480 (500)
++.++|+.++++++++++... .+.+++.+.|++
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ 142 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVIIAAN--VTPEKLTEILKA 142 (143)
T ss_dssp TGGGCCCEEEECTTSBEEEES--CCHHHHHHHHTC
T ss_pred CCCCCCcEEEECCCCEEEEcc--CCHHHHHHHHHh
Confidence 899999999998788755332 457788887764
No 346
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.82 E-value=1e-08 Score=91.26 Aligned_cols=92 Identities=15% Similarity=0.283 Sum_probs=73.6
Q ss_pred CC-eEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-----------------------------CCCCCC
Q 010804 393 GK-NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-----------------------------ANDIPG 442 (500)
Q Consensus 393 ~~-~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-----------------------------~~~~~~ 442 (500)
++ .++|+||++||++|+...|.|.++...++.. ++.++.|+++ .+..+.
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 45 5999999999999999999999999999753 5899999884 223345
Q ss_pred CCCCcCcceEEEEEcCCCceEEec-----------CCCCHHHHHHHHHhhcCCCC
Q 010804 443 DTFEVQGYPTVFFRSASGKTVPYE-----------GDRTKEDIVDFIENNRDKAA 486 (500)
Q Consensus 443 ~~~~i~~~P~~~~~~~~~~~~~~~-----------g~~~~~~l~~~i~~~~~~~~ 486 (500)
+.|++.++|++++++++++++ |. +..+.++|.+.|++.+....
T Consensus 137 ~~~~v~~~P~~~liD~~G~i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRLV-YHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHHTCCEESEEEEECTTCBEE-EEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHcCCCCCCeEEEECCCCcEE-EeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 568899999999998777754 33 24567999999999876543
No 347
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.81 E-value=2.9e-08 Score=86.83 Aligned_cols=94 Identities=14% Similarity=0.221 Sum_probs=76.6
Q ss_pred ccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHH
Q 010804 46 SKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKE 98 (500)
Q Consensus 46 ~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~ 98 (500)
-++++++|.|| ++||++|....+.+.++++++++.+ +.++.|+++... ..+
T Consensus 32 ~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~ 109 (197)
T 1qmv_A 32 YKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLG--CEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRR 109 (197)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCH
T ss_pred HCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHH
Confidence 36789999999 9999999999999999999997643 888888876421 224
Q ss_pred HHHhcCcc------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 99 LASQYEIR------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 99 ~~~~~~i~------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
+++.|++. .+|++++++.+|+....+.|. ++.+++.+.|....
T Consensus 110 ~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 110 LSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 88999998 799999999888888777664 46788888887653
No 348
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=5.6e-10 Score=94.18 Aligned_cols=91 Identities=23% Similarity=0.431 Sum_probs=68.5
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHH-HHHHcCCCCceEEEEEeCCCCCCCCCCCC------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDE-VAVSYQNDADVVIAKFDATANDIPGDTFE------------------------ 446 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~-~~~~~~~~~~~~~~~id~~~~~~~~~~~~------------------------ 446 (500)
.+++++|+||++||++|+...|.+.+ +...++...++.++.|+++.+....+++.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46799999999999999999999998 88777623478899998876644333333
Q ss_pred cCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 447 VQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 447 i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
+.++|+++++++++++. ++.| .+.+++.++|++..+
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 56799999997777755 4555 566777777766544
No 349
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.28 E-value=6e-10 Score=92.10 Aligned_cols=78 Identities=21% Similarity=0.435 Sum_probs=61.2
Q ss_pred CC-eEEEEEECCCChhHhhhhHHHHHHHHHcCCC-CceEEEEEeCCCCC-------------------------CCCCCC
Q 010804 393 GK-NVLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATAND-------------------------IPGDTF 445 (500)
Q Consensus 393 ~~-~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~id~~~~~-------------------------~~~~~~ 445 (500)
++ .++|+||++||++|+.+.|.+.+++..++.. .++.++.++++.+. .+.+.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 9999999999999999999999999888421 36777777776542 456678
Q ss_pred CcCcceEEEEEcCCCceEEecCCCC
Q 010804 446 EVQGYPTVFFRSASGKTVPYEGDRT 470 (500)
Q Consensus 446 ~i~~~P~~~~~~~~~~~~~~~g~~~ 470 (500)
++.++|++++++++|+++...|...
T Consensus 105 ~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 105 GITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 9999999999987777665555433
No 350
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.79 E-value=4e-08 Score=83.98 Aligned_cols=110 Identities=16% Similarity=0.286 Sum_probs=80.6
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh-----h-----------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCG-HCKKLAPEYEKAASELSSHDPPVVLAKVDANEE-----A----------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~-~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----~----------- 95 (500)
+..++.+.+...--++++++|.||++||+ +|....+.+.++.+++.+.+.++.++.|+++.. .
T Consensus 18 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~ 97 (174)
T 1xzo_A 18 FQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLS 97 (174)
T ss_dssp EECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCC
T ss_pred EEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33444444443334788999999999999 999999999999999987544588888887621 1
Q ss_pred ----------hHHHHHhc----------------CcccccEEEEEecCCceeeecCCCC--CHHHHHHHHHhhcC
Q 010804 96 ----------NKELASQY----------------EIRGFPTIKILRNGGKTIQEYKGPR--EADGIVEYLKKQSG 142 (500)
Q Consensus 96 ----------~~~~~~~~----------------~i~~~P~~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 142 (500)
..++.+.+ ++.+.|++++++.+|+....+.|.. +.+.+.+.|.+.+.
T Consensus 98 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 98 FDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp GGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred CcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 11122222 3566899999998889988899875 57899999887664
No 351
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.78 E-value=3.4e-08 Score=86.57 Aligned_cols=109 Identities=12% Similarity=0.176 Sum_probs=78.5
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCChh-hhhhhHHHHHHHHHhcCC-CCCeEEEEEecCh-----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGH-CKKLAPEYEKAASELSSH-DPPVVLAKVDANE----------------- 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~~-C~~~~~~~~~~~~~~~~~-~~~v~~~~vd~~~----------------- 93 (500)
+...+.+.+...--++++++|.||++||++ |....|.+.++.+++... +.++.++.|+++.
T Consensus 26 l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~ 105 (200)
T 2b7k_A 26 LEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHP 105 (200)
T ss_dssp EEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCT
T ss_pred EEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCC
Confidence 445555555444447889999999999997 999999999998888642 2347777777662
Q ss_pred ---------hhhHHHHHhcCcc-ccc---------------EEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 94 ---------EANKELASQYEIR-GFP---------------TIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 94 ---------~~~~~~~~~~~i~-~~P---------------~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+....+++.||+. +.| ++++++.+|+....+.|..+.+.+.+.|.+.+
T Consensus 106 ~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l 178 (200)
T 2b7k_A 106 SILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHV 178 (200)
T ss_dssp TCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHH
T ss_pred CceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 1123478888886 344 78888888899889998888777777776655
No 352
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.76 E-value=1.4e-08 Score=77.78 Aligned_cols=83 Identities=18% Similarity=0.275 Sum_probs=62.3
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEEEecCCceeeecCC
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKG 126 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g 126 (500)
.+.+.++.|+++||++|+.+.+.+.+++ .. +.|..+|.+.....+++++|| .++|+++ .+| +.. ..|
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~~---i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g-~~~--~~~ 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----DR---FILQEVDITLPENSTWYERYK-FDIPVFH--LNG-QFL--MMH 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----SS---SEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESS-SEE--EES
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----hC---CeEEEEECCCcchHHHHHHHC-CCCCEEE--ECC-EEE--Eec
Confidence 3456789999999999999998887543 22 889999998322344999999 9999873 344 443 356
Q ss_pred CCCHHHHHHHHHhhcC
Q 010804 127 PREADGIVEYLKKQSG 142 (500)
Q Consensus 127 ~~~~~~l~~~i~~~~~ 142 (500)
..+.+.|.+++.+.+.
T Consensus 81 g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SCCHHHHHHHHHSSSC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6889999999987653
No 353
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.75 E-value=2.7e-08 Score=84.13 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=73.8
Q ss_pred CCCeEEEEEECCCChh-HhhhhHHHHHHHHHcCC---CCceEEEEEeCCCCCC---------------------------
Q 010804 392 SGKNVLLEFYAPWCGH-CKKLAPILDEVAVSYQN---DADVVIAKFDATANDI--------------------------- 440 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~~~~~~~---~~~~~~~~id~~~~~~--------------------------- 440 (500)
.++.++|+||++||++ |+...|.+.++...++. ..++.++.|+++...+
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999988853 1368888888765321
Q ss_pred -CCCCCCcCcce---------------EEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 441 -PGDTFEVQGYP---------------TVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 441 -~~~~~~i~~~P---------------~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+.+.|++...| ++++++++|++. ++.|..+.++|.+.|++.+.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 162 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRP 162 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHGG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 33468888899 788887777754 677889999999999887643
No 354
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.74 E-value=3.4e-08 Score=73.24 Aligned_cols=77 Identities=21% Similarity=0.311 Sum_probs=59.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--hHHHHHhcC--cccccEEEEEecCCceeeecCCC
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--NKELASQYE--IRGFPTIKILRNGGKTIQEYKGP 127 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~~~~~~~--i~~~P~~~~~~~~~~~~~~~~g~ 127 (500)
++.|+++||++|+.+.+.+.++++++.+ +.+..+|++.++ ..+++++++ +.++|++++ +| +.+. |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~----i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~--~g-~~i~---~- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD----FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV--DQ-QHIG---G- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS----CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE--TT-EEEE---S-
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC----ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE--CC-EEEE---C-
Confidence 6789999999999999999999887643 889999987764 134999999 999999843 33 5433 2
Q ss_pred CCHHHHHHHHHhhc
Q 010804 128 READGIVEYLKKQS 141 (500)
Q Consensus 128 ~~~~~l~~~i~~~~ 141 (500)
.+.|.+++.+..
T Consensus 72 --~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 --YTDFAAWVKENL 83 (85)
T ss_dssp --SHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhc
Confidence 267888877643
No 355
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.74 E-value=6.9e-09 Score=79.55 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=61.6
Q ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC--CCCCCCCCCCcCcceEEEEEcCCCceEEecCCCC
Q 010804 393 GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT--ANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRT 470 (500)
Q Consensus 393 ~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~--~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~ 470 (500)
+...+++|+++||++|+.+.+.|.+++. ++.|..+|++ .++...++++ .++|+++ . .| +.. ..+..+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~-~-~g-~~~-~~~g~~ 83 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPENSTWYERYK-FDIPVFH-L-NG-QFL-MMHRVN 83 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTTHHHHHHSS-SSCSEEE-E-SS-SEE-EESSCC
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcchHHHHHHHC-CCCCEEE-E-CC-EEE-EecCCC
Confidence 5578899999999999999998876542 3889999998 5555566789 9999863 3 34 433 355689
Q ss_pred HHHHHHHHHhhcC
Q 010804 471 KEDIVDFIENNRD 483 (500)
Q Consensus 471 ~~~l~~~i~~~~~ 483 (500)
.+.|.++|.+...
T Consensus 84 ~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 84 TSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
No 356
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.73 E-value=5.1e-08 Score=85.58 Aligned_cols=93 Identities=16% Similarity=0.241 Sum_probs=75.7
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh--------------------------hhHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE--------------------------ANKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~~ 99 (500)
.+++++|.|| ++||++|....+.+.++++++++.+ +.++.|+++.. ...++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~--v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIG--CEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 5789999999 9999999999999999999997543 88888887641 12348
Q ss_pred HHhcCcc------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 100 ASQYEIR------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i~------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
++.|++. ++|++++++.+|+....+.|. .+.+++.+.|.+..
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 8899999 999999999888887776664 45688888887654
No 357
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.71 E-value=9.4e-09 Score=75.31 Aligned_cols=58 Identities=17% Similarity=0.280 Sum_probs=43.6
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEE
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKI 113 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~ 113 (500)
++.||++||++|+.+.+.++++++++ +.++.+..||.+. ...++++++|++++|++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~-~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLGTDK-ARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETTTCS-STHHHHHHHTCCEEEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEecCCh-hhHHHHHHcCCCcCCEEEE
Confidence 68899999999999999999876554 2225555555431 2234889999999999987
No 358
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.71 E-value=5.2e-08 Score=84.80 Aligned_cols=93 Identities=15% Similarity=0.304 Sum_probs=74.5
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~~ 99 (500)
++++++|.|| ++||++|....|.+.++++++++.+ +.++.|+++... ..++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN--VELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 6789999999 9999999999999999999997543 778888775311 2348
Q ss_pred HHhcCcc-----cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 100 ASQYEIR-----GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i~-----~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
++.|++. .+|++++++.+|+....+.|. .+.+++.+.|....
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 8999999 899999998888888777664 35677777776543
No 359
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.70 E-value=6.3e-08 Score=98.03 Aligned_cols=95 Identities=17% Similarity=0.274 Sum_probs=78.5
Q ss_pred EcCccChhhhhc-cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccccEEEE
Q 010804 35 TLDHSNFSDTVS-KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKI 113 (500)
Q Consensus 35 ~l~~~~~~~~~~-~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~P~~~~ 113 (500)
.++++.++.+.. .+++.++.||++||++|+.+.|.+++++..+. ++.+..+|.+..++ ++++|+|.++|++++
T Consensus 103 ~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~~--~~~~~~i~svPt~~i 176 (521)
T 1hyu_A 103 KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQN--EITERNVMGVPAVFV 176 (521)
T ss_dssp CSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCHH--HHHHTTCCSSSEEEE
T ss_pred CCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhHH--HHHHhCCCccCEEEE
Confidence 356666666653 45677999999999999999999999998864 49999999988877 999999999999977
Q ss_pred EecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 114 LRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 114 ~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
+ |+.+. .|..+.+.|.+|+...
T Consensus 177 --~-g~~~~--~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 177 --N-GKEFG--QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --T-TEEEE--ESCCCHHHHHHHHCCS
T ss_pred --C-CEEEe--cCCCCHHHHHHHHhhc
Confidence 4 46543 3999999999999764
No 360
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.70 E-value=7.9e-08 Score=84.98 Aligned_cols=93 Identities=14% Similarity=0.287 Sum_probs=74.8
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh--------------------------hhHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE--------------------------ANKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~~ 99 (500)
++++++|.|| +.||++|....+.+.++++++++.+ +.++.|+++.. ...++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERN--VELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 6789999999 9999999999999999999997543 77777776541 12348
Q ss_pred HHhcCcc-----cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 100 ASQYEIR-----GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i~-----~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
++.|++. .+|++++++.+|+....+.|. ++.+++.+.|....
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8999998 899999999888887777654 45788888887644
No 361
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.70 E-value=3.6e-09 Score=96.77 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=58.5
Q ss_pred eEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC------CCCCCCCCCCcCcceEEEEEcCCCceEEecCC
Q 010804 395 NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT------ANDIPGDTFEVQGYPTVFFRSASGKTVPYEGD 468 (500)
Q Consensus 395 ~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~------~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~ 468 (500)
..+++||++||++|+.+.|.|+++++.++ + +|++ .++..+++++++++||+++ +| + ++.|.
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~--Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G-~--~~~G~ 265 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP------Y--VECSPNGPGTPQAQECTEAGITSYPTWII--NG-R--TYTGV 265 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC------E--EESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT-E--EEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC------E--EEEeecCchhhHHHHHHHcCCcccCeEEE--CC-E--EecCC
Confidence 34789999999999999999999986652 3 4444 2556677899999999654 34 3 49999
Q ss_pred CCHHHHHHHHHhhc
Q 010804 469 RTKEDIVDFIENNR 482 (500)
Q Consensus 469 ~~~~~l~~~i~~~~ 482 (500)
.+.+++.+|+.-..
T Consensus 266 ~~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 266 RSLEALAVASGYPL 279 (291)
T ss_dssp CCHHHHHHHTCCCC
T ss_pred CCHHHHHHHHCCCC
Confidence 99999999986543
No 362
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.70 E-value=1.9e-08 Score=85.88 Aligned_cols=89 Identities=20% Similarity=0.260 Sum_probs=70.0
Q ss_pred CCCeEEEEEECCCChh-HhhhhHHHHHHHHHcCCC--CceEEEEEeCCCCCCC---------------------------
Q 010804 392 SGKNVLLEFYAPWCGH-CKKLAPILDEVAVSYQND--ADVVIAKFDATANDIP--------------------------- 441 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~~~~~~~~--~~~~~~~id~~~~~~~--------------------------- 441 (500)
.++.++|+||++||++ |+...|.+.++...++.. .++.++.|+++.+.+.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999997 999999999999988642 2688998988753211
Q ss_pred ----------------CCCCCcCcceEEEEEcCCCceE-EecCCC--CHHHHHHHHHhh
Q 010804 442 ----------------GDTFEVQGYPTVFFRSASGKTV-PYEGDR--TKEDIVDFIENN 481 (500)
Q Consensus 442 ----------------~~~~~i~~~P~~~~~~~~~~~~-~~~g~~--~~~~l~~~i~~~ 481 (500)
...|++.++|++++++ ++++. ++.|.. +.++|.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 1124567899999999 77744 677777 899999999865
No 363
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.69 E-value=6.6e-08 Score=82.23 Aligned_cols=92 Identities=15% Similarity=0.205 Sum_probs=70.2
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-------------------CCCCC---------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-------------------DIPGD--------- 443 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-------------------~~~~~--------- 443 (500)
.++.++|+||++||++|+...|.+.++...+++. ++.++.|+++.. .....
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4789999999999999999999999999999753 588888887520 00000
Q ss_pred -----C--------CCc--Ccce---EEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 444 -----T--------FEV--QGYP---TVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 444 -----~--------~~i--~~~P---~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
. +++ .++| +++++++++++. ++.|..+.++|.+.|++.+..
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI 169 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTC
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhc
Confidence 0 134 6678 888887777744 778988999999999987653
No 364
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.68 E-value=3.9e-08 Score=83.83 Aligned_cols=91 Identities=20% Similarity=0.270 Sum_probs=70.0
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC--------CCC---CC------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--------NDI---PG------------------ 442 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~--------~~~---~~------------------ 442 (500)
.+++++|+||++||++|+ ..|.+.++...+++. ++.++.|+++. .+. ..
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 468999999999999999 999999999998753 58888887631 000 00
Q ss_pred ------------CCCCcCcce------EEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 443 ------------DTFEVQGYP------TVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 443 ------------~~~~i~~~P------~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
+.+++.++| +++++++++++. ++.|..+.++|.+.|++.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 135678899 888887777744 778888999999999887754
No 365
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.68 E-value=3.6e-08 Score=83.13 Aligned_cols=88 Identities=15% Similarity=0.221 Sum_probs=67.4
Q ss_pred CCe-EEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC---------------------CCCCCCCCCCcCc
Q 010804 393 GKN-VLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT---------------------ANDIPGDTFEVQG 449 (500)
Q Consensus 393 ~~~-~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~---------------------~~~~~~~~~~i~~ 449 (500)
++. ++|+|| ++||++|+...|.+.++...++.. ++.++.|+.+ .+..+.+.|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 455 999999 999999999999999999999653 5888888876 2333445688888
Q ss_pred ----ceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhh
Q 010804 450 ----YPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENN 481 (500)
Q Consensus 450 ----~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~ 481 (500)
+|++++++++|++. ++.|. ...+++++.|++.
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 99999998777754 66662 2356666666654
No 366
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.68 E-value=6.1e-08 Score=82.57 Aligned_cols=93 Identities=17% Similarity=0.228 Sum_probs=73.2
Q ss_pred CCCeEEEEEECCCChh-HhhhhHHHHHHHHHcCC---CCceEEEEEeCCCCC----------------------------
Q 010804 392 SGKNVLLEFYAPWCGH-CKKLAPILDEVAVSYQN---DADVVIAKFDATAND---------------------------- 439 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~~~~~~~---~~~~~~~~id~~~~~---------------------------- 439 (500)
.++.++|+||++||++ |+...|.+.++...++. ..++.++.|+++...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999998842 236888888876421
Q ss_pred CCCCCCCcCcce---------------EEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 440 IPGDTFEVQGYP---------------TVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 440 ~~~~~~~i~~~P---------------~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
.+.+.|++...| +++++++++++. ++.|..+.++|.+.|++.+.+
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 123357777777 888887777744 678889999999999987754
No 367
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.67 E-value=6.5e-08 Score=86.03 Aligned_cols=93 Identities=16% Similarity=0.281 Sum_probs=75.6
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh--------------------------hhHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE--------------------------ANKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~~ 99 (500)
.+++++|.|| +.||++|....+.+.++++++.+.+ +.++.|+++.. ....+
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVN--CEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 5689999999 9999999999999999999997543 78888877531 12348
Q ss_pred HHhcCcc------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 100 ASQYEIR------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i~------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
++.|++. .+|++++++.+|+....+.|. .+.+++.+.|....
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 8999998 999999998888887776664 56688888887654
No 368
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.66 E-value=1e-07 Score=82.52 Aligned_cols=92 Identities=15% Similarity=0.204 Sum_probs=69.7
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC--------CC--------C-------C-------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--------ND--------I-------P------- 441 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~--------~~--------~-------~------- 441 (500)
.++.++|+||++||++|+...|.+.++...+++. ++.++.|+++. .+ . .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 4689999999999999999999999999999753 57787777652 00 0 0
Q ss_pred --C------------CCCCcCcce---EEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 442 --G------------DTFEVQGYP---TVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 442 --~------------~~~~i~~~P---~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
. ..+++..+| ++++++++|++. ++.|..+.++|.+.|++.++.
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 0 112345677 999998777754 788889999999999988764
No 369
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.66 E-value=1.1e-07 Score=82.52 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=71.9
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC--------------------------------C
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN--------------------------------D 439 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--------------------------------~ 439 (500)
.++.++|+||++||++|+...|.+.++...+++. ++.++.|+++.. .
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4689999999999999999999999999998753 588888877620 0
Q ss_pred CCC---------CCCCcCcce------EEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCCC
Q 010804 440 IPG---------DTFEVQGYP------TVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDKA 485 (500)
Q Consensus 440 ~~~---------~~~~i~~~P------~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~~ 485 (500)
... ..+++.++| +++++++++++. ++.|..+.+++.+.|++.+.+.
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 187 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLEST 187 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHCC
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhhc
Confidence 000 013677888 888887777744 7789899999999999887543
No 370
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.65 E-value=1.9e-07 Score=79.20 Aligned_cols=104 Identities=15% Similarity=0.193 Sum_probs=77.5
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPW-CGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------ 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~-c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------ 93 (500)
+...+.+.+...--++++++|.||++| |++|....|.+.++++++ .. +.++.|+.+.
T Consensus 29 l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~---~~vv~is~d~~~~~~~~~~~~~~~~~~~ 104 (167)
T 2jsy_A 29 VLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GD---VNVYTISADLPFAQARWCGANGIDKVET 104 (167)
T ss_dssp EEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SS---CEEEEEECSSGGGTSCCGGGSSCTTEEE
T ss_pred EECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CC---CEEEEEECCCHHHHHHHHHhcCCCCceE
Confidence 344555444444346789999999999 999999999999999999 32 7777777653
Q ss_pred --h-hhHHHHHhcCccc------ccEEEEEecCCceeeecCCC-----CCHHHHHHHHHhh
Q 010804 94 --E-ANKELASQYEIRG------FPTIKILRNGGKTIQEYKGP-----READGIVEYLKKQ 140 (500)
Q Consensus 94 --~-~~~~~~~~~~i~~------~P~~~~~~~~~~~~~~~~g~-----~~~~~l~~~i~~~ 140 (500)
+ ...++++.|++.. +|+.++++.+|+....+.|. .+.+.+.+.+.+.
T Consensus 105 ~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 105 LSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp EEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred eeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 1 2234888999887 49999999888988888653 2457787777654
No 371
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.64 E-value=4.5e-09 Score=77.07 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=43.0
Q ss_pred EEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC-CCCCCCCCCCcCcceEEEE
Q 010804 396 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT-ANDIPGDTFEVQGYPTVFF 455 (500)
Q Consensus 396 ~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~-~~~~~~~~~~i~~~P~~~~ 455 (500)
-+++|+++||++|+.+.+.+.+++..++. .+.++.+|.+ .+....++++++++|++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 36789999999999999999988765432 4555555543 2334456689999999976
No 372
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.63 E-value=2.1e-07 Score=78.57 Aligned_cols=106 Identities=12% Similarity=0.226 Sum_probs=76.1
Q ss_pred eEEcCccChhhhhccCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYA-PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~-~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 95 (500)
+...+.+.+...--.+++++|.||+ .||++|....+.+.++.+++++.+ +.+..|+++...
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~~~~~~~~ 97 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG--AKILGVSRDSVKSHDNFCAKQGFAFPLV 97 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHCCSSCEE
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHhCCCceEE
Confidence 3344444444333367799999997 999999999999999999998655 666667665311
Q ss_pred ---hHHHHHhcCccc------------ccEEEEEecCCceeeecCCCC---CHHHHHHHHHhh
Q 010804 96 ---NKELASQYEIRG------------FPTIKILRNGGKTIQEYKGPR---EADGIVEYLKKQ 140 (500)
Q Consensus 96 ---~~~~~~~~~i~~------------~P~~~~~~~~~~~~~~~~g~~---~~~~l~~~i~~~ 140 (500)
...+++.|++.. +|+.++++.+|+....+.|.. ..+++.+.+.+.
T Consensus 98 ~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 98 SDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp ECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 224777888877 899999998888887776543 345666666543
No 373
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.63 E-value=2.5e-09 Score=84.84 Aligned_cols=80 Identities=14% Similarity=0.346 Sum_probs=56.3
Q ss_pred CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-----CCCCCCCCcCcceEEEEEcCCCceEEecCC
Q 010804 394 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-----DIPGDTFEVQGYPTVFFRSASGKTVPYEGD 468 (500)
Q Consensus 394 ~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-----~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~ 468 (500)
+.+++ ||++||++|+.+.|.|.++.. .+.++.+|.+.+ ..+.+.+++.++|++ +. .|..+..+.|.
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~-~~-~g~~v~~~~~~ 90 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV-FI-GGKQIGGCDTV 90 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-EE-TTEEEECHHHH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE-EE-CCEEECChHHH
Confidence 45555 999999999999999988743 245555555443 235667899999999 44 45445556554
Q ss_pred C---CHHHHHHHHHhhc
Q 010804 469 R---TKEDIVDFIENNR 482 (500)
Q Consensus 469 ~---~~~~l~~~i~~~~ 482 (500)
. +.+.|.++|++..
T Consensus 91 ~~~~~~~~l~~~l~~~g 107 (116)
T 2e7p_A 91 VEKHQRNELLPLLQDAA 107 (116)
T ss_dssp HHHHHTTCHHHHHHHTT
T ss_pred HHHHhCChHHHHHHHcc
Confidence 4 6778999998754
No 374
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.63 E-value=4.4e-07 Score=79.92 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=81.1
Q ss_pred eEEcC-ccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHH-
Q 010804 33 VLTLD-HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELAS- 101 (500)
Q Consensus 33 v~~l~-~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~- 101 (500)
+..++ .+.+...--+++++||.||++||+.|. ..|.+.++++++++.+ +.+..|+|+. ....++++
T Consensus 40 l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g--~~Vlgvs~d~f~~~e~~~~~~i~~f~~~ 116 (215)
T 2i3y_A 40 AIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYG--LVVLGFPCNQFGKQEPGDNKEILPGLKY 116 (215)
T ss_dssp EEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC--eEEEEEEccccCcCCCCCHHHHHHHHHh
Confidence 44555 555555555889999999999999998 7899999999998654 8888888752 11234666
Q ss_pred -----hcCccc-------------------------------------------------ccEEEEEecCCceeeecCCC
Q 010804 102 -----QYEIRG-------------------------------------------------FPTIKILRNGGKTIQEYKGP 127 (500)
Q Consensus 102 -----~~~i~~-------------------------------------------------~P~~~~~~~~~~~~~~~~g~ 127 (500)
++++.. .|+.++++.+|+.+.+|.|.
T Consensus 117 ~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~ 196 (215)
T 2i3y_A 117 VRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHR 196 (215)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTT
T ss_pred ccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCC
Confidence 654320 16788898888999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 010804 128 READGIVEYLKKQSG 142 (500)
Q Consensus 128 ~~~~~l~~~i~~~~~ 142 (500)
.+.+.|.+.|.+.+.
T Consensus 197 ~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 197 ATVSSVKTDILAYLK 211 (215)
T ss_dssp SCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHH
Confidence 889999888887663
No 375
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.61 E-value=1e-07 Score=81.99 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=68.9
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-------------------C---------C---
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-------------------D---------I--- 440 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-------------------~---------~--- 440 (500)
.++.++|+||++||++|+...|.|.++...+++. ++.++.|+++.. . +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 4689999999999999999999999999999753 588888877530 0 0
Q ss_pred -CCC---CCCcCcce-------EEEEEcCCCceE-EecCCCCHHHHHHHHHhhc
Q 010804 441 -PGD---TFEVQGYP-------TVFFRSASGKTV-PYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 441 -~~~---~~~i~~~P-------~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~ 482 (500)
... .+.+..+| +.+++++++++. ++.|..+.++|.+.|++.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 000 12255788 788887777754 7888889999999998765
No 376
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.61 E-value=4.9e-07 Score=76.80 Aligned_cols=111 Identities=13% Similarity=0.079 Sum_probs=82.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh------------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCG-HCKKLAPEYEKAASELSSHDPPVVLAKVDANE------------------ 93 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~-~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------ 93 (500)
+...+.+.+...--.+++++|.||++||+ .|....+.+.++.+++...+.++.++.|.++.
T Consensus 13 l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~ 92 (170)
T 3me7_A 13 LVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDG 92 (170)
T ss_dssp EEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCS
T ss_pred EEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 34455554444434588999999999997 69999999999999997544557777776541
Q ss_pred -----------hhhHHHHHhcC---------cccccEEEEEecCCceeeecCCC-CCHHHHHHHHHhhcCC
Q 010804 94 -----------EANKELASQYE---------IRGFPTIKILRNGGKTIQEYKGP-READGIVEYLKKQSGP 143 (500)
Q Consensus 94 -----------~~~~~~~~~~~---------i~~~P~~~~~~~~~~~~~~~~g~-~~~~~l~~~i~~~~~~ 143 (500)
+...+++++|| +.+.|++++++.+|+....|.|. .+.+++.+.|.+...+
T Consensus 93 ~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 93 KGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp SSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTC
T ss_pred CCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 11234667655 34568999999988888888886 7899999999987754
No 377
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.60 E-value=2.6e-07 Score=82.23 Aligned_cols=92 Identities=16% Similarity=0.302 Sum_probs=73.2
Q ss_pred ccCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHH
Q 010804 46 SKHNFIVVEFYA-PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKE 98 (500)
Q Consensus 46 ~~~~~~lv~f~~-~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~ 98 (500)
-++++++|.||+ .||++|....|.+.++++++++.+ +.++.|+++... ...
T Consensus 67 ~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~ 144 (222)
T 3ztl_A 67 YRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN--CQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQE 144 (222)
T ss_dssp GTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSH
T ss_pred hCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchH
Confidence 378899999996 999999999999999999998644 778888776421 224
Q ss_pred HHHhcCcc------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHh
Q 010804 99 LASQYEIR------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKK 139 (500)
Q Consensus 99 ~~~~~~i~------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~ 139 (500)
+++.|++. .+|+.++++.+|+....+.|. ...+++++.+..
T Consensus 145 ~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 145 ISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 78889998 899999999888888887665 345666666654
No 378
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.60 E-value=1e-07 Score=80.24 Aligned_cols=87 Identities=21% Similarity=0.278 Sum_probs=66.6
Q ss_pred CeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-----------------------CCCCCCCCCcC-
Q 010804 394 KNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-----------------------NDIPGDTFEVQ- 448 (500)
Q Consensus 394 ~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-----------------------~~~~~~~~~i~- 448 (500)
+.++|+|| ++||++|+...|.+.++...++.. ++.++.|+++. +....+.|++.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~ 115 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN 115 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcc
Confidence 48999998 999999999999999999998643 68888888763 22334568888
Q ss_pred ---cce--EEEEEcCCCceE-EecCCC----CHHHHHHHHHhh
Q 010804 449 ---GYP--TVFFRSASGKTV-PYEGDR----TKEDIVDFIENN 481 (500)
Q Consensus 449 ---~~P--~~~~~~~~~~~~-~~~g~~----~~~~l~~~i~~~ 481 (500)
++| +++++++++++. ++.|.. ..+++.+.|++.
T Consensus 116 ~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 116 EQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred ccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 999 888887777754 566654 467777777653
No 379
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.59 E-value=1.1e-07 Score=80.84 Aligned_cols=91 Identities=20% Similarity=0.191 Sum_probs=69.1
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----C------------------------CC--
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----D------------------------IP-- 441 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----~------------------------~~-- 441 (500)
.++.++|+||++||++|+...|.+.++...+++. ++.++.|+++.. . +.
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 4689999999999999999999999999998653 588888887530 0 00
Q ss_pred --CC-CC--------C-----cCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 442 --GD-TF--------E-----VQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 442 --~~-~~--------~-----i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
.. .| + +..+|++++++++|++. ++.|..+.+++.+.|++.+.
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 00 01 2 44568999998777755 77888888999999988764
No 380
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.57 E-value=1.9e-07 Score=82.07 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=68.5
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----CCC-C---C---------CCC---------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA----NDI-P---G---------DTF--------- 445 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~----~~~-~---~---------~~~--------- 445 (500)
.+++++|+||++||++|+...|.|.++..+++.. ++.++.|+++. ... . . .++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d 124 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEK 124 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEE
Confidence 3689999999999999999999999999998653 68888887751 100 0 0 001
Q ss_pred --------------------------------------------CcCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHh
Q 010804 446 --------------------------------------------EVQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIEN 480 (500)
Q Consensus 446 --------------------------------------------~i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~ 480 (500)
.+...|+.+++++++++. ++.|..+.++|.+.|++
T Consensus 125 ~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ 204 (208)
T 2f8a_A 125 CEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 204 (208)
T ss_dssp CCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred eecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 134458999998888855 77888888999999887
Q ss_pred hcC
Q 010804 481 NRD 483 (500)
Q Consensus 481 ~~~ 483 (500)
.+.
T Consensus 205 ll~ 207 (208)
T 2f8a_A 205 LLS 207 (208)
T ss_dssp HHC
T ss_pred Hhh
Confidence 653
No 381
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.57 E-value=7.7e-08 Score=83.95 Aligned_cols=90 Identities=9% Similarity=0.154 Sum_probs=71.6
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-------------------------CCCCCCCCC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-------------------------NDIPGDTFE 446 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-------------------------~~~~~~~~~ 446 (500)
++.++|+|| ++||++|+...|.+.++...++.. ++.++.|+++. +..+.+.|+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 679999999 999999999999999999998653 68888888764 111233577
Q ss_pred cC-----cceEEEEEcCCCceE-EecCCC----CHHHHHHHHHhhcC
Q 010804 447 VQ-----GYPTVFFRSASGKTV-PYEGDR----TKEDIVDFIENNRD 483 (500)
Q Consensus 447 i~-----~~P~~~~~~~~~~~~-~~~g~~----~~~~l~~~i~~~~~ 483 (500)
+. .+|+++++++++++. ++.|.. +.+++.+.|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 88 999999998777755 555653 78999999998765
No 382
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.54 E-value=1.8e-07 Score=80.71 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=66.9
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-------------------------------CC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-------------------------------DI 440 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-------------------------------~~ 440 (500)
.++.++|+||++||++|+...|.+.++...+++. ++.++.|+++.. ..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 4689999999999999999999999999999753 588888876520 00
Q ss_pred CCC-CC----------C-----cCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhh
Q 010804 441 PGD-TF----------E-----VQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 441 ~~~-~~----------~-----i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~ 481 (500)
... .| + +..+|+++++++++++. ++.|..+.++|.+.|++.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 000 01 2 34469999998777754 788888888888887764
No 383
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.54 E-value=8.1e-08 Score=83.20 Aligned_cols=90 Identities=12% Similarity=0.153 Sum_probs=70.9
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-------------------------CCCCCCCCC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-------------------------NDIPGDTFE 446 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-------------------------~~~~~~~~~ 446 (500)
++.++|+|| ++||++|+...|.+.++...++.. ++.++.|+++. +....+.|+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 689999999 999999999999999999988642 58888888764 112234578
Q ss_pred cC------cceEEEEEcCCCceE-EecCCC----CHHHHHHHHHhhcC
Q 010804 447 VQ------GYPTVFFRSASGKTV-PYEGDR----TKEDIVDFIENNRD 483 (500)
Q Consensus 447 i~------~~P~~~~~~~~~~~~-~~~g~~----~~~~l~~~i~~~~~ 483 (500)
+. ++|+++++++++++. ++.|.. +.+++.+.|++...
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 87 899999998777755 565643 78899999987664
No 384
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.53 E-value=3.9e-07 Score=77.89 Aligned_cols=89 Identities=10% Similarity=0.129 Sum_probs=65.9
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPW-CGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~-c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 95 (500)
+..++.+.+...--++++++|.||+.| |++|....|.+.+++++ . + +.++.|+.+...
T Consensus 29 l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~-~--v~vv~Is~D~~~~~~~~~~~~~~~~~~~ 103 (175)
T 1xvq_A 29 LTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S-G--ATVLCVSKDLPFAQKRFCGAEGTENVMP 103 (175)
T ss_dssp EECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T-T--CEEEEEESSCHHHHTTCC------CEEE
T ss_pred EECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c-C--CEEEEEECCCHHHHHHHHHHcCCCCceE
Confidence 334444443333336789999999999 99999999999999988 2 2 777777775211
Q ss_pred ----hHHHHHhcCcccc---------cEEEEEecCCceeeecCC
Q 010804 96 ----NKELASQYEIRGF---------PTIKILRNGGKTIQEYKG 126 (500)
Q Consensus 96 ----~~~~~~~~~i~~~---------P~~~~~~~~~~~~~~~~g 126 (500)
...+++.|++... |+.++++.+|+....+.|
T Consensus 104 l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 104 ASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp EECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred eeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEEC
Confidence 1238899999877 899999988888887753
No 385
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.53 E-value=7.9e-07 Score=77.94 Aligned_cols=106 Identities=11% Similarity=0.061 Sum_probs=78.9
Q ss_pred eEEcC-ccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------hhhHHHHH-
Q 010804 33 VLTLD-HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE---------EANKELAS- 101 (500)
Q Consensus 33 v~~l~-~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~~~~~- 101 (500)
+..++ .+.+...--+++++||.||++||++| ...|.+.++.+++++.+ +.+..|+|+. ....++++
T Consensus 22 l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g--~~vlgvs~d~f~~~e~~~~~~i~~f~~~ 98 (207)
T 2r37_A 22 ALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG--LVILGFPCNQFGKQEPGENSEILPTLKY 98 (207)
T ss_dssp EEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT--EEEEEEECCCBTTCCCSCHHHHHHHHHH
T ss_pred eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC--EEEEEEECcccCcCCCCCHHHHHHHHHh
Confidence 44455 45555444578999999999999999 67799999999998654 8888888752 12233666
Q ss_pred -----hcCcc-------------------------------------------------cccEEEEEecCCceeeecCCC
Q 010804 102 -----QYEIR-------------------------------------------------GFPTIKILRNGGKTIQEYKGP 127 (500)
Q Consensus 102 -----~~~i~-------------------------------------------------~~P~~~~~~~~~~~~~~~~g~ 127 (500)
++++. ..|+.++++.+|+...+|.|.
T Consensus 99 ~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~ 178 (207)
T 2r37_A 99 VRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHR 178 (207)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTT
T ss_pred cchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCC
Confidence 55432 016788998888998999998
Q ss_pred CCHHHHHHHHHhhc
Q 010804 128 READGIVEYLKKQS 141 (500)
Q Consensus 128 ~~~~~l~~~i~~~~ 141 (500)
.+.+.+.+.|.+.+
T Consensus 179 ~~~~~l~~~I~~ll 192 (207)
T 2r37_A 179 TTVSNVKMDILSYM 192 (207)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 88888888887765
No 386
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.52 E-value=5.8e-08 Score=84.98 Aligned_cols=90 Identities=10% Similarity=0.188 Sum_probs=70.7
Q ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----------------------------CCCCC
Q 010804 392 SGKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA----------------------------NDIPG 442 (500)
Q Consensus 392 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~----------------------------~~~~~ 442 (500)
.++.++|+|| ++||++|+...|.+.++...++.. ++.++.|+++. +..+.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 4689999999 999999999999999999988642 68888888763 11223
Q ss_pred CCCCcC-----cceEEEEEcCCCceE-EecCCC----CHHHHHHHHHhhc
Q 010804 443 DTFEVQ-----GYPTVFFRSASGKTV-PYEGDR----TKEDIVDFIENNR 482 (500)
Q Consensus 443 ~~~~i~-----~~P~~~~~~~~~~~~-~~~g~~----~~~~l~~~i~~~~ 482 (500)
+.|++. ++|+++++++++++. ++.|.. +.+++.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 457888 999999998777755 555644 6889999998765
No 387
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.50 E-value=5e-07 Score=77.20 Aligned_cols=85 Identities=18% Similarity=0.257 Sum_probs=64.4
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC----------------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN---------------------------------- 92 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~---------------------------------- 92 (500)
.++++++.|+++|||+|..+.|.+.++.+++.. +.+...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~ 96 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN----VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSG 96 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC----EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 567899999999999999999999999887532 555444421
Q ss_pred ---------------------------------hhhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 93 ---------------------------------EEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 93 ---------------------------------~~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
-.....+++++||.++|++++ +|+ .+.|..+.+.|.+.|.+
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i---~g~---~~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV---EDA---LVPGFVEQSQLQDAVDR 170 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTE---EECSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE---CCE---EeeCCCCHHHHHHHHHH
Confidence 011223778899999999987 333 67799999999999886
Q ss_pred hc
Q 010804 140 QS 141 (500)
Q Consensus 140 ~~ 141 (500)
.+
T Consensus 171 ~l 172 (175)
T 3gyk_A 171 AR 172 (175)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 388
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.50 E-value=3.8e-08 Score=72.98 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=56.7
Q ss_pred EEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC----CCCCCCC--cCcceEEEEEcCCCceEEecCCCC
Q 010804 397 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND----IPGDTFE--VQGYPTVFFRSASGKTVPYEGDRT 470 (500)
Q Consensus 397 ~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~----~~~~~~~--i~~~P~~~~~~~~~~~~~~~g~~~ 470 (500)
++.|+++||++|+.+.+.|.+++..+. ++.+..+|++.++ .+.++++ +.++|++ ++ +| +.+ .|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i-~~-~g-~~i--~~--- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI-FV-DQ-QHI--GG--- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE-EE-TT-EEE--ES---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChHHHHHHHHHhCCCCceeCeE-EE-CC-EEE--EC---
Confidence 678999999999999999999988754 4889999987654 3444577 8999998 34 33 322 23
Q ss_pred HHHHHHHHHhhc
Q 010804 471 KEDIVDFIENNR 482 (500)
Q Consensus 471 ~~~l~~~i~~~~ 482 (500)
.++|.+++++..
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 268888888764
No 389
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.48 E-value=4e-07 Score=80.66 Aligned_cols=83 Identities=19% Similarity=0.397 Sum_probs=61.2
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEe------------------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVD------------------------------------ 90 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd------------------------------------ 90 (500)
+++++++.||++||++|+++.|.+.++.+. + +.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~--v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~ 158 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL----G--ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSV 158 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT----T--EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC----C--cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCC
Confidence 467899999999999999999999988652 1 3333322
Q ss_pred ----cCh--hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhh
Q 010804 91 ----ANE--EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 140 (500)
Q Consensus 91 ----~~~--~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 140 (500)
|.. +...++++++||+++|++ ++.+| . .+.|..+.+.|.+++.+.
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG-~---~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 159 APASCDVDIADHYALGVQLGVSGTPAV-VLSNG-T---LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTS-C---EEESCCCHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHcCCCccCEE-EEcCC-e---EecCCCCHHHHHHHHHHh
Confidence 111 223348899999999999 45444 3 567989999999998764
No 390
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.48 E-value=2.1e-07 Score=78.01 Aligned_cols=105 Identities=15% Similarity=0.295 Sum_probs=67.7
Q ss_pred eEEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 95 (500)
+...+.+.+...--+++++++.|| +.||++|....|.+.+++++++..+ +.+..|+.+...
T Consensus 15 l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~--~~~v~vs~d~~~~~~~~~~~~~~~~p~l 92 (157)
T 4g2e_A 15 LPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN--AVVLGISVDPPFSNKAFKEHNKLNFTIL 92 (157)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCS--SEEEEEESSCHHHHHHHHHHTTCCSEEE
T ss_pred eECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccC--ceEeeecccchhHHHHHHHHcCCcEEEE
Confidence 334444444444457889999999 9999999999999999988887655 667777655422
Q ss_pred ---hHHHHHhcCcc-----------cccEEEEEecCCceeeecC-----CCCCHHHHHHHHHh
Q 010804 96 ---NKELASQYEIR-----------GFPTIKILRNGGKTIQEYK-----GPREADGIVEYLKK 139 (500)
Q Consensus 96 ---~~~~~~~~~i~-----------~~P~~~~~~~~~~~~~~~~-----g~~~~~~l~~~i~~ 139 (500)
..+++++||+. ..|+.++.+.+|+..+.+. +..+.+++.+.|+.
T Consensus 93 ~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 93 SDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp ECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred EcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 12366667663 3578889988888765543 44567788877764
No 391
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.47 E-value=1e-06 Score=75.51 Aligned_cols=105 Identities=9% Similarity=0.153 Sum_probs=75.4
Q ss_pred eEEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 95 (500)
+...+.+.+...--.+++++|.|| +.||+.|....+.+.++.+++++.+ +.+..|+++...
T Consensus 36 l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~--~~vv~Vs~D~~~~~~~~~~~~~~~f~~l 113 (179)
T 3ixr_A 36 LMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN--ATVLGVSRDSVKSHDSFCAKQGFTFPLV 113 (179)
T ss_dssp EEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT--EEEEEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred EECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHcCCceEEE
Confidence 445555555444446788899998 9999999999999999999998655 677777765422
Q ss_pred ---hHHHHHhcCccc------------ccEEEEEecCCceeeecCCC---CCHHHHHHHHHh
Q 010804 96 ---NKELASQYEIRG------------FPTIKILRNGGKTIQEYKGP---READGIVEYLKK 139 (500)
Q Consensus 96 ---~~~~~~~~~i~~------------~P~~~~~~~~~~~~~~~~g~---~~~~~l~~~i~~ 139 (500)
...+++.|++.. .|+.++++.+|+....+.+. ...+++.+.+.+
T Consensus 114 ~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 114 SDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp ECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred ECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 224777788753 58899999888888777553 334556666554
No 392
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.45 E-value=1.1e-06 Score=69.76 Aligned_cols=98 Identities=11% Similarity=0.139 Sum_probs=80.3
Q ss_pred cCceEEcC-ccChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCcccc
Q 010804 30 KEFVLTLD-HSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGF 108 (500)
Q Consensus 30 ~~~v~~l~-~~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~~ 108 (500)
.+.+..|+ .++++.++..+++++|-|+++||+.| .+.|.++|+.+ .. +.|+.++- +. +++++++. .
T Consensus 20 ~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d---~~F~~t~~---~~--v~~~~~v~-~ 86 (124)
T 2l4c_A 20 AQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PG---VSFGISTD---SE--VLTHYNIT-G 86 (124)
T ss_dssp SCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TT---SEEEEECC---HH--HHHHTTCC-S
T ss_pred CCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CC---ceEEEECh---HH--HHHHcCCC-C
Confidence 33444564 46799999889999999999999998 68899999998 44 89998864 33 99999998 7
Q ss_pred cEEEEEecCCceeeecCC----CCCHHHHHHHHHhh
Q 010804 109 PTIKILRNGGKTIQEYKG----PREADGIVEYLKKQ 140 (500)
Q Consensus 109 P~~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~ 140 (500)
|++++|++..+....|.| ..+.+.|.+||...
T Consensus 87 ~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 87 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 999999986456667886 78999999999864
No 393
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.43 E-value=8.9e-07 Score=78.52 Aligned_cols=93 Identities=14% Similarity=0.299 Sum_probs=72.0
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~~ 99 (500)
++++++|.|| +.||++|....|.+.++++++.+.+ +.++.|+++... ...+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKN--VELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 6789999999 9999999999999999999997543 677777664311 1236
Q ss_pred HHhcCc-----ccccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 100 ASQYEI-----RGFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i-----~~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
++.|++ ..+|+.++++.+|+....+.|. .+.+++.+.|.+..
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 677787 3689999999888887777653 56788888887644
No 394
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.43 E-value=5.5e-07 Score=75.58 Aligned_cols=86 Identities=13% Similarity=0.134 Sum_probs=61.5
Q ss_pred hhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh-------------------hhHHHH
Q 010804 41 FSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE-------------------ANKELA 100 (500)
Q Consensus 41 ~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------~~~~~~ 100 (500)
+.++..++++++|.|| +.||++|....|.+.++++++++.+ .+..|+++.. ....++
T Consensus 28 l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 104 (159)
T 2a4v_A 28 LKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI 104 (159)
T ss_dssp HHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHH
T ss_pred HHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHH
Confidence 3344344458889987 8999999999999999999998765 4444444321 122488
Q ss_pred HhcCccccc------EEEEEecCCceeeecCCCCCH
Q 010804 101 SQYEIRGFP------TIKILRNGGKTIQEYKGPREA 130 (500)
Q Consensus 101 ~~~~i~~~P------~~~~~~~~~~~~~~~~g~~~~ 130 (500)
+.||+...| +.+++ .+|+....+.|....
T Consensus 105 ~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 105 GLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp HHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHH
T ss_pred HHhCCcccccCCccceEEEE-cCCEEEEEEccCCcc
Confidence 889999888 55556 566888888886544
No 395
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.43 E-value=8.5e-07 Score=76.14 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=65.1
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-----CCC------CCC-----CC---------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-----DIP------GDT-----FE--------- 446 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-----~~~------~~~-----~~--------- 446 (500)
.++.++|+||++||++|+...|.+.++...+++. ++.++.|+++.. +.. .++ +.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILG 115 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccC
Confidence 4689999999999999999999999999999763 688888876530 000 000 00
Q ss_pred -------------cCcceE----EEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 447 -------------VQGYPT----VFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 447 -------------i~~~P~----~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
..++|+ .++++++|+++ ++.|..+.+.+.+.|++.++
T Consensus 116 ~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 116 SEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp TTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred ccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 113687 77887777754 78888887777777766553
No 396
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.40 E-value=9.3e-07 Score=77.88 Aligned_cols=82 Identities=18% Similarity=0.325 Sum_probs=60.7
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEE--Eec---------------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAK--VDA--------------------------------- 91 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~--vd~--------------------------------- 91 (500)
+++++++.|+++||++|+++.|.+.++.+. + +.+.. +..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----G--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----T--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----C--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 467899999999999999999999886542 2 33332 221
Q ss_pred -----Ch--hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHh
Q 010804 92 -----NE--EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKK 139 (500)
Q Consensus 92 -----~~--~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 139 (500)
.. +...++++++||+++|++++ .+| + .+.|..+.+.|.++|.+
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG-~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT-STG-E---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTS-C---CCCSCCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCC-E---EecCCCCHHHHHHHHHh
Confidence 10 12234788999999999987 544 4 67898999999999875
No 397
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.39 E-value=6e-07 Score=78.34 Aligned_cols=90 Identities=13% Similarity=0.199 Sum_probs=69.2
Q ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------------CCCC
Q 010804 392 SGKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------------DIPG 442 (500)
Q Consensus 392 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------------~~~~ 442 (500)
.++.++|+|| ++||++|+...+.|.++...++.. ++.++.|+++.. ..+.
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 3689999999 999999999999999999998642 688888887631 1123
Q ss_pred CCCCcC------cceEEEEEcCCCceE-EecC----CCCHHHHHHHHHhhc
Q 010804 443 DTFEVQ------GYPTVFFRSASGKTV-PYEG----DRTKEDIVDFIENNR 482 (500)
Q Consensus 443 ~~~~i~------~~P~~~~~~~~~~~~-~~~g----~~~~~~l~~~i~~~~ 482 (500)
+.|++. .+|+++++++++++. ++.| ..+.+++++.|+...
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 357777 799999998887755 4445 356789999988653
No 398
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.39 E-value=1.4e-06 Score=78.41 Aligned_cols=89 Identities=17% Similarity=0.239 Sum_probs=65.3
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh---------------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE--------------------------------- 93 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------------- 93 (500)
+++.+++.|+.+||++|+++.+.+..+.+. + +|.+..+...-
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 170 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLK 170 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCC
Confidence 456789999999999999999998887654 2 26665444310
Q ss_pred ---------------hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhc
Q 010804 94 ---------------EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 94 ---------------~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
+...++++++||+++|++++.+.+|+ .....|..+.+.|.++|.+..
T Consensus 171 l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 171 LNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 11224778899999999999875454 357889999999999887654
No 399
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.37 E-value=7.7e-07 Score=76.79 Aligned_cols=89 Identities=15% Similarity=0.085 Sum_probs=66.0
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----CCC---------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA----NDI--------------------------- 440 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~----~~~--------------------------- 440 (500)
.++.++|.||++||++|+...|.+.++..++++. ++.++.|+++. ...
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCCh
Confidence 3689999999999999999999999999998753 68888887652 100
Q ss_pred CCC-CC----------C-----cCcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhh
Q 010804 441 PGD-TF----------E-----VQGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 441 ~~~-~~----------~-----i~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~ 481 (500)
... .| + +..+|+.++++++++++ ++.|..+.++|.+.|++.
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 000 01 2 22368999998777754 778888888888888764
No 400
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.37 E-value=7.9e-07 Score=79.85 Aligned_cols=98 Identities=14% Similarity=0.173 Sum_probs=75.2
Q ss_pred hhhhccCCe-EEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-------------------------
Q 010804 42 SDTVSKHNF-IVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA------------------------- 95 (500)
Q Consensus 42 ~~~~~~~~~-~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------------- 95 (500)
.+.+.++++ +|+.|+++||+.|....+.+.++++++++.+ +.+..|+++...
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~g--v~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~ 104 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLG--VDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADP 104 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECT
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCC--cEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECC
Confidence 444436675 4567889999999999999999999998654 788888876421
Q ss_pred hHHHHHhcCcc-------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 96 NKELASQYEIR-------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 96 ~~~~~~~~~i~-------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
...+++.||+. .+|++++++++|+....+.|. ++.+++.+.|....
T Consensus 105 ~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 105 QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 23488899987 899999999888877766554 47888888887644
No 401
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.35 E-value=2.9e-06 Score=73.18 Aligned_cols=93 Identities=12% Similarity=0.099 Sum_probs=70.7
Q ss_pred cCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------------hHHHHHh
Q 010804 47 KHNFIVVEFYA-PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA-----------------------NKELASQ 102 (500)
Q Consensus 47 ~~~~~lv~f~~-~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~~~ 102 (500)
++++++|.||+ .||++|....|.+.++++++++.+ +.+..|+++... ...+++.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLG--VDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 57899999995 999999999999999999997644 777777765321 1135566
Q ss_pred cCcc------cccEEEEEecCCceeeecCCCC----CHHHHHHHHHhhc
Q 010804 103 YEIR------GFPTIKILRNGGKTIQEYKGPR----EADGIVEYLKKQS 141 (500)
Q Consensus 103 ~~i~------~~P~~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~ 141 (500)
|++. ..|+.++++.+|+....+.|.. +.+++.+.|....
T Consensus 107 ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 6665 3699999998888888877643 5788888877654
No 402
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.33 E-value=1.5e-06 Score=73.99 Aligned_cols=93 Identities=17% Similarity=0.332 Sum_probs=69.4
Q ss_pred CCCeEEEEEECCCCh-hHhhhhHHHHHHHHHcCCCC-ceEEEEEeCCCCC-C--------------------CC------
Q 010804 392 SGKNVLLEFYAPWCG-HCKKLAPILDEVAVSYQNDA-DVVIAKFDATAND-I--------------------PG------ 442 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~-~c~~~~~~~~~~~~~~~~~~-~~~~~~id~~~~~-~--------------------~~------ 442 (500)
.++.++|+||++||+ +|+...+.+.++...++... ++.++.|+++... . ..
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 368899999999999 99999999999998885431 4788888775210 0 00
Q ss_pred -----------------CCCCcCcceEEEEEcCCCceE-EecCCC--CHHHHHHHHHhhcCC
Q 010804 443 -----------------DTFEVQGYPTVFFRSASGKTV-PYEGDR--TKEDIVDFIENNRDK 484 (500)
Q Consensus 443 -----------------~~~~i~~~P~~~~~~~~~~~~-~~~g~~--~~~~l~~~i~~~~~~ 484 (500)
..+++..+|+++++++++++. ++.|.. +.++|.+.|++.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 013456789999998888855 666765 589999999987653
No 403
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.33 E-value=3.2e-06 Score=71.13 Aligned_cols=102 Identities=13% Similarity=0.078 Sum_probs=70.6
Q ss_pred EEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh------------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE------------------ 94 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------------ 94 (500)
...+.+.+...--++++++|.|| +.||++|....|.+.++++++ .. +.+..|+++..
T Consensus 28 ~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~---v~vv~is~d~~~~~~~~~~~~~~~~~~~l 103 (163)
T 1psq_A 28 TTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DN---TVVLTVSMDLPFAQKRWCGAEGLDNAIML 103 (163)
T ss_dssp ECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TT---EEEEEEESSCHHHHHHHHHHHTCTTSEEE
T ss_pred EcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CC---cEEEEEECCCHHHHHHHHHhcCCCCcEEe
Confidence 34444444443346789999999 499999999999999998887 32 77777765431
Q ss_pred ---hhHHHHHhcCcc----c--ccEEEEEecCCceeeecCCC-----CCHHHHHHHHHh
Q 010804 95 ---ANKELASQYEIR----G--FPTIKILRNGGKTIQEYKGP-----READGIVEYLKK 139 (500)
Q Consensus 95 ---~~~~~~~~~~i~----~--~P~~~~~~~~~~~~~~~~g~-----~~~~~l~~~i~~ 139 (500)
....+++.|++. + .|+.++++.+|+....+.|. .+.+++.+.|.+
T Consensus 104 ~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 104 SDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp ECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred cCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 112366667765 3 38999999888888877653 334677776654
No 404
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.32 E-value=6.3e-07 Score=78.56 Aligned_cols=89 Identities=11% Similarity=0.193 Sum_probs=68.8
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------------CCCCC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------------DIPGD 443 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------------~~~~~ 443 (500)
++.++|+|| +.||++|+...+.+.++..+++. .++.++.|+++.. ..+.+
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~-~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD-IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 679999999 99999999999999999999864 2688888887641 11223
Q ss_pred CCCcC------cceEEEEEcCCCceE-EecC----CCCHHHHHHHHHhhc
Q 010804 444 TFEVQ------GYPTVFFRSASGKTV-PYEG----DRTKEDIVDFIENNR 482 (500)
Q Consensus 444 ~~~i~------~~P~~~~~~~~~~~~-~~~g----~~~~~~l~~~i~~~~ 482 (500)
.|++. .+|+++++++++++. ++.| ..+.+++.+.|+...
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 47777 999999998888755 4444 356789998888654
No 405
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.32 E-value=2.3e-06 Score=75.32 Aligned_cols=93 Identities=13% Similarity=0.236 Sum_probs=72.2
Q ss_pred cCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHHH
Q 010804 47 KHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKEL 99 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~~ 99 (500)
++++++|.|| +.||++|....|.+.++++++++.+ +.+..|+++... ...+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 6789999999 9999999999999999999997544 777777664321 1246
Q ss_pred HHhcCcc------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 100 ASQYEIR------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 100 ~~~~~i~------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
++.|++. .+|+.++++.+|+....+.|. .+.+++.+.|....
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 7778874 589999999888887777553 46778888877643
No 406
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.31 E-value=2.4e-07 Score=78.19 Aligned_cols=99 Identities=14% Similarity=0.272 Sum_probs=71.7
Q ss_pred hhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-------------------hHHHH
Q 010804 41 FSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA-------------------NKELA 100 (500)
Q Consensus 41 ~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-------------------~~~~~ 100 (500)
+.+...+++++++.|| +.||++|....+.+.++++++++.+ +.+..|+.+... ..+++
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~--v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~ 103 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN--AEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI 103 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS--SEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC--ceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH
Confidence 4455668899999988 9999999999999999988887655 667777665422 22467
Q ss_pred HhcCcc----------cccEEEEEecCCceeeecCC-----CCCHHHHHHHHHhhc
Q 010804 101 SQYEIR----------GFPTIKILRNGGKTIQEYKG-----PREADGIVEYLKKQS 141 (500)
Q Consensus 101 ~~~~i~----------~~P~~~~~~~~~~~~~~~~g-----~~~~~~l~~~i~~~~ 141 (500)
+.||+. ..|+.++.+.+|+..+.+.+ ..+.+++++.+++..
T Consensus 104 ~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 104 KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 777763 36888999888887665433 346777777776543
No 407
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.28 E-value=1.1e-06 Score=78.06 Aligned_cols=89 Identities=15% Similarity=0.261 Sum_probs=68.9
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------------CCCCC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------------DIPGD 443 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------------~~~~~ 443 (500)
++.++|+|| +.||++|+...+.|.++..+++.. ++.++.|+++.. ..+.+
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 999999999999999999998542 588888877531 11233
Q ss_pred CCCcC------cceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhhc
Q 010804 444 TFEVQ------GYPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENNR 482 (500)
Q Consensus 444 ~~~i~------~~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~~ 482 (500)
.|++. .+|+++++++++++. ++.|. .+.+++.+.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 57787 999999998777755 44443 56789999988765
No 408
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.28 E-value=1.1e-06 Score=77.53 Aligned_cols=90 Identities=17% Similarity=0.262 Sum_probs=68.5
Q ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------------CCCC
Q 010804 392 SGKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------------DIPG 442 (500)
Q Consensus 392 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------------~~~~ 442 (500)
.++.++|+|| +.||+.|+...|.|.++..+++. .++.++.|+++.. ..+.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE-RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4678999999 99999999999999999999853 2688888877541 1122
Q ss_pred CCCCcC-----cceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhhc
Q 010804 443 DTFEVQ-----GYPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENNR 482 (500)
Q Consensus 443 ~~~~i~-----~~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~~ 482 (500)
+.|++. .+|+++++++++++. ++.|. .+.+++.+.|+...
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 357777 899999998888755 44443 45889999888654
No 409
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.28 E-value=3.6e-06 Score=71.09 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=69.8
Q ss_pred eEEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh----------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---------------- 95 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 95 (500)
+..++.+.+...--++++++|.|| +.||++|....+.+.+++++ . + +.+..|+++...
T Consensus 31 l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~--~~vv~is~d~~~~~~~~~~~~~~~~~~~ 105 (166)
T 3p7x_A 31 VLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--E--GIVLTISADLPFAQKRWCASAGLDNVIT 105 (166)
T ss_dssp EECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--T--SEEEEEESSCHHHHHHHHHHHTCSSCEE
T ss_pred EEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--C--CEEEEEECCCHHHHHHHHHHcCCCceEE
Confidence 344444444444346788999999 78999999999999988766 2 2 666666655311
Q ss_pred -----hHHHHHhcCccc------ccEEEEEecCCceeeecC-----CCCCHHHHHHHHHh
Q 010804 96 -----NKELASQYEIRG------FPTIKILRNGGKTIQEYK-----GPREADGIVEYLKK 139 (500)
Q Consensus 96 -----~~~~~~~~~i~~------~P~~~~~~~~~~~~~~~~-----g~~~~~~l~~~i~~ 139 (500)
..++++.|++.. .|+.++++.+|+....+. +..+.+.+.+.+++
T Consensus 106 l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 106 LSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp EECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 123666677764 799999998888776643 23556777777654
No 410
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.27 E-value=2.8e-06 Score=73.70 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=67.4
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh--------------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE-------------------------------- 94 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------------- 94 (500)
.++++++.|+++||++|..+.|.+.++.+++.. ++.|..+.....
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~ 100 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA---DVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC---CeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 577899999999999999999999999888765 377776665200
Q ss_pred ---------------------------------------hhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHH
Q 010804 95 ---------------------------------------ANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVE 135 (500)
Q Consensus 95 ---------------------------------------~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~ 135 (500)
.....+.++||.++|++++ +|+......|..+.+.+.+
T Consensus 101 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v---ng~~~~~~~G~~~~e~l~~ 177 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV---NGKYRFDIGSAGGPEETLK 177 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTTEEEEHHHHTSHHHHHH
T ss_pred hCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE---CCEEEecccccCCHHHHHH
Confidence 0112456789999999988 4466556668888888888
Q ss_pred HHHhhc
Q 010804 136 YLKKQS 141 (500)
Q Consensus 136 ~i~~~~ 141 (500)
.|...+
T Consensus 178 ~i~~l~ 183 (192)
T 3h93_A 178 LADYLI 183 (192)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 411
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.27 E-value=2.5e-06 Score=72.50 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=68.8
Q ss_pred EEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh-HHHH-----------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN-KELA----------- 100 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~----------- 100 (500)
...+.+.+...--++++++|.|| +.||++|....+.+.++.+++ .. +.+..|+++.... .+++
T Consensus 33 ~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~---v~vv~Is~d~~~~~~~~~~~~~~~~~~~l 108 (171)
T 2yzh_A 33 VTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EG---VDVTVVSMDLPFAQKRFCESFNIQNVTVA 108 (171)
T ss_dssp EETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TT---EEEEEEESSCHHHHHHHHHHTTCCSSEEE
T ss_pred ECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CC---ceEEEEeCCCHHHHHHHHHHcCCCCeEEe
Confidence 34444444333336789999999 899999999999999998887 32 7777777654221 1123
Q ss_pred --------HhcCcc---------cccEEEEEecCCceeeecCC-----CCCHHHHHHHHHhh
Q 010804 101 --------SQYEIR---------GFPTIKILRNGGKTIQEYKG-----PREADGIVEYLKKQ 140 (500)
Q Consensus 101 --------~~~~i~---------~~P~~~~~~~~~~~~~~~~g-----~~~~~~l~~~i~~~ 140 (500)
+.|++. ..|+.++++.+|+....+.| ..+.+++.+.|++.
T Consensus 109 ~D~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 109 SDFRYRDMEKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp ECTTTCGGGGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred ecCccCcHHHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 445543 15888888877787777754 34567777777653
No 412
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.26 E-value=3.9e-06 Score=75.39 Aligned_cols=93 Identities=12% Similarity=0.233 Sum_probs=72.5
Q ss_pred ccCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHH
Q 010804 46 SKHNFIVVEFYA-PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKE 98 (500)
Q Consensus 46 ~~~~~~lv~f~~-~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~ 98 (500)
-.+++++|.||+ .||++|....+.+.++++++++.+ +.+..|+++... ..+
T Consensus 75 ~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g--v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~ 152 (240)
T 3qpm_A 75 YRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN--TEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQ 152 (240)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSH
T ss_pred hCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHH
Confidence 367899999998 999999999999999999998654 777777766422 124
Q ss_pred HHHhcCcc------cccEEEEEecCCceeeecCC----CCCHHHHHHHHHhh
Q 010804 99 LASQYEIR------GFPTIKILRNGGKTIQEYKG----PREADGIVEYLKKQ 140 (500)
Q Consensus 99 ~~~~~~i~------~~P~~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~ 140 (500)
+++.||+. .+|+.++++.+|+....+.+ ..+.+++++.|...
T Consensus 153 v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 153 ISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 77778887 68999999988888766554 35667787777654
No 413
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.26 E-value=7.6e-07 Score=77.32 Aligned_cols=90 Identities=18% Similarity=0.280 Sum_probs=68.6
Q ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------------CCCC
Q 010804 392 SGKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------------DIPG 442 (500)
Q Consensus 392 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------------~~~~ 442 (500)
.++.++|+|| ++||++|+...|.+.++..+++. .++.++.|+++.. ..+.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE-RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4679999999 99999999999999999998853 2688888877631 1123
Q ss_pred CCCCcC-----cceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhhc
Q 010804 443 DTFEVQ-----GYPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENNR 482 (500)
Q Consensus 443 ~~~~i~-----~~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~~ 482 (500)
+.|++. .+|+++++++++++. ++.|. .+.+++.+.|+...
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 357888 899999998777755 44453 45788888887654
No 414
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.26 E-value=6.4e-07 Score=78.36 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=66.4
Q ss_pred CCCeEEEEEECCCChh-HhhhhHHHHHHHHHcCC--CCceEEEEEeCCCCCC----------------------------
Q 010804 392 SGKNVLLEFYAPWCGH-CKKLAPILDEVAVSYQN--DADVVIAKFDATANDI---------------------------- 440 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~~~~~~~--~~~~~~~~id~~~~~~---------------------------- 440 (500)
.++.++|+||++||++ |+...|.|.++...++. ..++.++.|+++...+
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3689999999999997 99999999998877742 1257777777663100
Q ss_pred CCCCCCcC-cc---------------eEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCCCCCC
Q 010804 441 PGDTFEVQ-GY---------------PTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAAPK 488 (500)
Q Consensus 441 ~~~~~~i~-~~---------------P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~~~~~ 488 (500)
+.+.|++. .. |++++++++|++. .+.|..+.+.+.+.|.+.+.+..++
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l~~~ 184 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYVPA 184 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHCCCC
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHhhhh
Confidence 11234444 23 4778887777755 6777788888888888777654443
No 415
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.25 E-value=5.9e-06 Score=71.81 Aligned_cols=44 Identities=32% Similarity=0.496 Sum_probs=38.3
Q ss_pred ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC
Q 010804 46 SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN 92 (500)
Q Consensus 46 ~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 92 (500)
..++++++.|+++||++|+.+.|.+.++.+.+.+. +.+..++..
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQD---VVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCC---eEEEEEecc
Confidence 35788999999999999999999999999888653 888888875
No 416
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.22 E-value=1.1e-05 Score=68.34 Aligned_cols=108 Identities=15% Similarity=0.278 Sum_probs=76.0
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh--hh---HHHHHhcC--
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPWCG-HCKKLAPEYEKAASELSSHDPPVVLAKVDANEE--AN---KELASQYE-- 104 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~c~-~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--~~---~~~~~~~~-- 104 (500)
+...+.+.+...--+|++++|+||.+||+ .|....+.+.++.+.+...+.++.++.|.++-+ .. .+++++|+
T Consensus 17 L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~ 96 (170)
T 4hde_A 17 FTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTED 96 (170)
T ss_dssp EECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSC
T ss_pred EECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCC
Confidence 44555565655556899999999999997 799999999999988876666788887766421 10 11233322
Q ss_pred ----------------------------------cccccEEEEEecCCceeeecCCC--CCHHHHHHHHHhh
Q 010804 105 ----------------------------------IRGFPTIKILRNGGKTIQEYKGP--READGIVEYLKKQ 140 (500)
Q Consensus 105 ----------------------------------i~~~P~~~~~~~~~~~~~~~~g~--~~~~~l~~~i~~~ 140 (500)
+.+.|++++++.+|+....|.|. ...+.+.+-|++.
T Consensus 97 ~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~L 168 (170)
T 4hde_A 97 TSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRL 168 (170)
T ss_dssp CTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHH
T ss_pred CCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHH
Confidence 23347899999988888888874 4557777766654
No 417
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.22 E-value=5.1e-06 Score=70.04 Aligned_cols=89 Identities=15% Similarity=0.173 Sum_probs=63.3
Q ss_pred EEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA----------------- 95 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 95 (500)
...+.+.+...--++++++|.|| +.||++|....|.+.++++++ .. +.+..|+++...
T Consensus 29 ~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~---v~vv~Is~d~~~~~~~~~~~~~~~~~~~l 104 (165)
T 1q98_A 29 VGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SN---TIVLCISADLPFAQARFCGAEGIENAKTV 104 (165)
T ss_dssp ECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TT---EEEEEEESSCHHHHTTCTTTTTCTTEEEE
T ss_pred ECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CC---CEEEEEeCCCHHHHHHHHHHcCCCceEEe
Confidence 34444444333346789999999 899999999999999999988 32 666666554211
Q ss_pred ----hHHHHHhcCccc---------ccEEEEEecCCceeeecCC
Q 010804 96 ----NKELASQYEIRG---------FPTIKILRNGGKTIQEYKG 126 (500)
Q Consensus 96 ----~~~~~~~~~i~~---------~P~~~~~~~~~~~~~~~~g 126 (500)
...+++.|++.. .|+.++++.+|+....+.|
T Consensus 105 ~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 105 STFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp ECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred eccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 234777788753 4999999888888777754
No 418
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.20 E-value=2.9e-06 Score=75.42 Aligned_cols=89 Identities=13% Similarity=0.263 Sum_probs=67.2
Q ss_pred CCCeEEEEEEC-CCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------------------------CCCC
Q 010804 392 SGKNVLLEFYA-PWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------------------------DIPG 442 (500)
Q Consensus 392 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------------------------~~~~ 442 (500)
.++.++|+||+ .||++|+...|.|.++...++.. ++.++.|+++.. ..+.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 36899999996 99999999999999999999643 588888887641 0112
Q ss_pred CCCCcC------cceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhh
Q 010804 443 DTFEVQ------GYPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENN 481 (500)
Q Consensus 443 ~~~~i~------~~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~ 481 (500)
+.|++. .+|+++++++++++. ++.|. ...+++++.|+..
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 347777 899999998888755 44443 3578888888753
No 419
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.19 E-value=3.4e-06 Score=71.33 Aligned_cols=88 Identities=20% Similarity=0.210 Sum_probs=64.4
Q ss_pred CCCeEEEEEECCC-ChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-----------------------CCCCCCCc
Q 010804 392 SGKNVLLEFYAPW-CGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND-----------------------IPGDTFEV 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~-c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-----------------------~~~~~~~i 447 (500)
.++.++|+||++| |++|+...|.+.++..++ . ++.++.|+.+..+ ...+.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 3679999999999 999999999999999988 3 5777777776311 11123555
Q ss_pred Cc------ceEEEEEcCCCceE-EecC-----CCCHHHHHHHHHhhc
Q 010804 448 QG------YPTVFFRSASGKTV-PYEG-----DRTKEDIVDFIENNR 482 (500)
Q Consensus 448 ~~------~P~~~~~~~~~~~~-~~~g-----~~~~~~l~~~i~~~~ 482 (500)
.. .|+++++++++++. ++.| ..+.+++.+.|++.+
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 54 49999998888755 4543 235688888887654
No 420
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.19 E-value=9.1e-07 Score=68.37 Aligned_cols=73 Identities=21% Similarity=0.250 Sum_probs=48.4
Q ss_pred ChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----hHHHHHhcCcccccEEEEE
Q 010804 40 NFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA-----NKELASQYEIRGFPTIKIL 114 (500)
Q Consensus 40 ~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----~~~~~~~~~i~~~P~~~~~ 114 (500)
.++.++..++ ++.|+++||++|+++.+.+.+....+ ++ +..+|++.++ ...+.+.+|+.++|++++
T Consensus 4 ~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~----~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~~- 74 (105)
T 1kte_A 4 FVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKE----GL--LEFVDITATSDTNEIQDYLQQLTGARTVPRVFI- 74 (105)
T ss_dssp HHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCT----TS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEEE-
T ss_pred HHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCC----Cc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEEE-
Confidence 3566666654 57799999999999999888653322 12 4455655542 134888999999999843
Q ss_pred ecCCceeee
Q 010804 115 RNGGKTIQE 123 (500)
Q Consensus 115 ~~~~~~~~~ 123 (500)
+ |+.+..
T Consensus 75 -~-g~~i~g 81 (105)
T 1kte_A 75 -G-KECIGG 81 (105)
T ss_dssp -T-TEEEES
T ss_pred -C-CEEEec
Confidence 3 355443
No 421
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.19 E-value=1e-06 Score=75.20 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=62.2
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN--------------------------------- 438 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--------------------------------- 438 (500)
+.+.+++.|+++||++|+.+.|.+.++...+++ +.+...+....
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~ 97 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN---VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGK 97 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC---EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 467889999999999999999999999887653 55555543211
Q ss_pred ------------------------------------CCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 439 ------------------------------------DIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 439 ------------------------------------~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
.....++++.++|++++ .| ..+.|..+.+.|.+.|.+.+
T Consensus 98 ~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g---~~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 98 ANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED---ALVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp CSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT---EEECSCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC---EEeeCCCCHHHHHHHHHHHH
Confidence 00123578999999986 23 36779999999999998765
No 422
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.19 E-value=8.7e-06 Score=73.38 Aligned_cols=90 Identities=18% Similarity=0.325 Sum_probs=64.5
Q ss_pred cCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhcCCCCCe-EEEEEecChhh--------------------hHHHHHhc
Q 010804 47 KHNFIVVEFY-APWCGHCK-KLAPEYEKAASELSSHDPPV-VLAKVDANEEA--------------------NKELASQY 103 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~-~~~~~~~~~~~~~~~~~~~v-~~~~vd~~~~~--------------------~~~~~~~~ 103 (500)
++++++|.|| +.||++|. ...|.+.++++++++.+ + .+..|+.+... ...+++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG--VDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 6789999999 99999999 89999999999997654 6 66666654311 22367777
Q ss_pred Ccc-----------cccEEEEEecCCceeeecCCC---------CCHHHHHHHHHh
Q 010804 104 EIR-----------GFPTIKILRNGGKTIQEYKGP---------READGIVEYLKK 139 (500)
Q Consensus 104 ~i~-----------~~P~~~~~~~~~~~~~~~~g~---------~~~~~l~~~i~~ 139 (500)
|+. ..|+.+++ .+|+....+.|. .+.+++++.+..
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred CceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 765 34788888 566877776664 345666655543
No 423
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.17 E-value=1.1e-06 Score=77.91 Aligned_cols=82 Identities=20% Similarity=0.351 Sum_probs=58.9
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN--------------------------------- 438 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--------------------------------- 438 (500)
+.+.+++.|+++||++|+.+.|.+.++.+. ++.+..+.....
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 467899999999999999999999988652 355544433110
Q ss_pred -----------CCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 439 -----------DIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 439 -----------~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
....++++++++|++ ++..| ..+.|..+.++|.++|.+..
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG---~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAV-VLSNG---TLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTS---CEEESCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEE-EEcCC---eEecCCCCHHHHHHHHHHhh
Confidence 011235789999999 45444 25678899999999998653
No 424
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.17 E-value=4.2e-06 Score=59.95 Aligned_cols=69 Identities=13% Similarity=0.292 Sum_probs=49.8
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHH---HhcCcccccEEEEEecCCceeeecCCCC
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELA---SQYEIRGFPTIKILRNGGKTIQEYKGPR 128 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~---~~~~i~~~P~~~~~~~~~~~~~~~~g~~ 128 (500)
++.|+++||++|++..+.+++. + +.+..+|.+.++. +. +++++.++|++++ +|+. . |..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~--i~~~~~di~~~~~--~~~~~~~~~~~~vP~l~~---~g~~---~-~g~ 64 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------G--LAYNTVDISLDDE--ARDYVMALGYVQAPVVEV---DGEH---W-SGF 64 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEETTTCHH--HHHHHHHTTCBCCCEEEE---TTEE---E-ESC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------C--CCcEEEECCCCHH--HHHHHHHcCCCccCEEEE---CCeE---E-cCC
Confidence 6789999999999998887753 2 5567778776544 33 3799999999974 3343 2 335
Q ss_pred CHHHHHHHHH
Q 010804 129 EADGIVEYLK 138 (500)
Q Consensus 129 ~~~~l~~~i~ 138 (500)
+.+.|.+++.
T Consensus 65 ~~~~l~~~l~ 74 (75)
T 1r7h_A 65 RPERIKQLQA 74 (75)
T ss_dssp CHHHHHHHHC
T ss_pred CHHHHHHHHh
Confidence 6778877764
No 425
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.15 E-value=4.8e-06 Score=70.99 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=60.0
Q ss_pred CCCeEEEEEECCC-ChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----------------------CCCCCCCCCcC
Q 010804 392 SGKNVLLEFYAPW-CGHCKKLAPILDEVAVSYQNDADVVIAKFDATA----------------------NDIPGDTFEVQ 448 (500)
Q Consensus 392 ~~~~~~v~f~~~~-c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~----------------------~~~~~~~~~i~ 448 (500)
.+++++|+||++| |++|+...|.+.++... + ++.++.|+.+. +..+.+.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~---~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S---GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T---TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c---CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCc
Confidence 3679999999998 99999999999999887 2 57788887762 11223346676
Q ss_pred cc---------eEEEEEcCCCceE-EecC--C---CCHHHHHHHHHh
Q 010804 449 GY---------PTVFFRSASGKTV-PYEG--D---RTKEDIVDFIEN 480 (500)
Q Consensus 449 ~~---------P~~~~~~~~~~~~-~~~g--~---~~~~~l~~~i~~ 480 (500)
.. |+++++++++++. ++.| . ...+++++.+.+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~ 165 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA 165 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred ccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHh
Confidence 66 8999998888855 4532 2 244555555543
No 426
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.14 E-value=4.1e-06 Score=70.48 Aligned_cols=89 Identities=11% Similarity=0.193 Sum_probs=64.1
Q ss_pred CCeEEEEEEC-CCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------------------CCCCCCCCcCc-
Q 010804 393 GKNVLLEFYA-PWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN---------------------DIPGDTFEVQG- 449 (500)
Q Consensus 393 ~~~~~v~f~~-~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~---------------------~~~~~~~~i~~- 449 (500)
++.++|+||+ .||+.|+...|.+.++...++.. ++.++.|.++.. ....+.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 5689999998 99999999999999999988642 577777776521 11123466655
Q ss_pred -----------ceEEEEEcCCCceE-EecCC---CCHHHHHHHHHhhc
Q 010804 450 -----------YPTVFFRSASGKTV-PYEGD---RTKEDIVDFIENNR 482 (500)
Q Consensus 450 -----------~P~~~~~~~~~~~~-~~~g~---~~~~~l~~~i~~~~ 482 (500)
+|+.+++++++++. .+.+. ...+++.+.|++..
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHHC
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHHh
Confidence 89999998888855 45443 33577777776543
No 427
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.13 E-value=2e-06 Score=62.76 Aligned_cols=72 Identities=11% Similarity=0.149 Sum_probs=48.8
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh-HHHHHhcCcccccEEEEEecCCceeeecCCCCCH
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN-KELASQYEIRGFPTIKILRNGGKTIQEYKGPREA 130 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~ 130 (500)
++.|+++||++|+...+.+.+. + +.+..+|++.++. .+..+++++.++|+++ .+| +.+ |..+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~--i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g-~~~----~g~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------G--FDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGD-LSW----SGFRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETT-EEE----ESCCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------C--CCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECC-EEE----ecCCH
Confidence 6789999999999998887752 2 5677888876544 1123358999999983 344 432 33556
Q ss_pred HHHHHHHHh
Q 010804 131 DGIVEYLKK 139 (500)
Q Consensus 131 ~~l~~~i~~ 139 (500)
+.|.+++.+
T Consensus 67 ~~l~~~l~~ 75 (81)
T 1h75_A 67 DMINRLHPA 75 (81)
T ss_dssp HHHGGGSCC
T ss_pred HHHHHHHhc
Confidence 666666544
No 428
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.13 E-value=1.8e-06 Score=76.09 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=58.4
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC----------------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA---------------------------------- 437 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~---------------------------------- 437 (500)
+.+.+++.|+++||++|+.+.|.+.++.+. ++.+..+....
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL-----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 467899999999999999999999997652 24444333221
Q ss_pred ----------CCCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhh
Q 010804 438 ----------NDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN 481 (500)
Q Consensus 438 ----------~~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 481 (500)
+....++++++++|++++ .+|. .+.|..+.++|.++|.+.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHhc
Confidence 001123578999999987 4443 567888999999999753
No 429
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.13 E-value=1.6e-05 Score=69.33 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=63.8
Q ss_pred EEcCccChhhhhccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------
Q 010804 34 LTLDHSNFSDTVSKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA----------------- 95 (500)
Q Consensus 34 ~~l~~~~~~~~~~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 95 (500)
...+.+.+...--++++++|.|| +.||+.|....+.+.++++++ . + +.++.|+++...
T Consensus 64 ~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-~--v~vv~Is~D~~~~~~~~~~~~~~~~f~~l 139 (200)
T 3zrd_A 64 VAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-N--TVVLCISSDLPFAQSRFCGAEGLSNVITL 139 (200)
T ss_dssp ECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-T--EEEEEEESSCHHHHTTCTTTTTCTTEEEE
T ss_pred ECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-C--CEEEEEECCCHHHHHHHHHHcCCCCceEE
Confidence 34444444444447889999999 789999999999999999998 3 2 777777765411
Q ss_pred ----hHHHHHhcCcc---------cccEEEEEecCCceeeecC
Q 010804 96 ----NKELASQYEIR---------GFPTIKILRNGGKTIQEYK 125 (500)
Q Consensus 96 ----~~~~~~~~~i~---------~~P~~~~~~~~~~~~~~~~ 125 (500)
...+++.||+. ..|+.++++.+|+....+.
T Consensus 140 ~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~ 182 (200)
T 3zrd_A 140 STLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSEL 182 (200)
T ss_dssp ETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred ecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEe
Confidence 23467777775 2599999988888776654
No 430
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.13 E-value=1.6e-06 Score=62.22 Aligned_cols=69 Identities=19% Similarity=0.312 Sum_probs=51.1
Q ss_pred EEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCC---CCCcCcceEEEEEcCCCceEEecCCCCHHH
Q 010804 397 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGD---TFEVQGYPTVFFRSASGKTVPYEGDRTKED 473 (500)
Q Consensus 397 ~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~---~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~ 473 (500)
+++|+++||++|+.+.+.+.+. ++.+..+|++.++...+ .+++.++|++++ |++. + ++.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~---~g~~--~-~g~~~~~ 68 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV---DGEH--W-SGFRPER 68 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE---TTEE--E-ESCCHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE---CCeE--E-cCCCHHH
Confidence 5789999999999999988864 36677788887654433 588899999973 3332 3 3467888
Q ss_pred HHHHHH
Q 010804 474 IVDFIE 479 (500)
Q Consensus 474 l~~~i~ 479 (500)
+.++|+
T Consensus 69 l~~~l~ 74 (75)
T 1r7h_A 69 IKQLQA 74 (75)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 888873
No 431
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.11 E-value=8e-06 Score=73.87 Aligned_cols=92 Identities=13% Similarity=0.238 Sum_probs=70.9
Q ss_pred ccCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHH
Q 010804 46 SKHNFIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKE 98 (500)
Q Consensus 46 ~~~~~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~ 98 (500)
-.+++++|.|| +.||+.|....+.+.++++++++.+ +.++.|+++... ...
T Consensus 89 ~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g--v~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~ 166 (254)
T 3tjj_A 89 YRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQ 166 (254)
T ss_dssp GTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSH
T ss_pred HCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHH
Confidence 36789999999 9999999999999999999998654 777777765421 124
Q ss_pred HHHhcCcc------cccEEEEEecCCceeeecCC----CCCHHHHHHHHHh
Q 010804 99 LASQYEIR------GFPTIKILRNGGKTIQEYKG----PREADGIVEYLKK 139 (500)
Q Consensus 99 ~~~~~~i~------~~P~~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~ 139 (500)
+++.||+. .+|++++++.+|+....+.+ .++.+++++.|..
T Consensus 167 va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 167 ISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 67777775 47999999988888776654 3566777777765
No 432
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.10 E-value=8e-07 Score=64.98 Aligned_cols=72 Identities=7% Similarity=0.079 Sum_probs=50.8
Q ss_pred EEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCC---CCCcCcceEEEEEcCCCceEEecCCCCHHH
Q 010804 397 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGD---TFEVQGYPTVFFRSASGKTVPYEGDRTKED 473 (500)
Q Consensus 397 ~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~---~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~ 473 (500)
+++|+++||++|+.+.+.+.+. ++.+..+|++.++...+ ++++.++|++ +. .| +. .+..+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~-~~-~g-~~---~~g~~~~~ 68 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVV-IA-GD-LS---WSGFRPDM 68 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE-EE-TT-EE---EESCCHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEE-EE-CC-EE---EecCCHHH
Confidence 5789999999999999988763 36677889887644332 3788999998 33 33 32 23467777
Q ss_pred HHHHHHhhc
Q 010804 474 IVDFIENNR 482 (500)
Q Consensus 474 l~~~i~~~~ 482 (500)
|.++|+++.
T Consensus 69 l~~~l~~~~ 77 (81)
T 1h75_A 69 INRLHPAPH 77 (81)
T ss_dssp HGGGSCCC-
T ss_pred HHHHHhccc
Confidence 777776543
No 433
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.10 E-value=1e-05 Score=68.28 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=36.4
Q ss_pred cCCeEEEEEE-CCCChhhhh-hhHHHHHHHHHhcCCCCCe-EEEEEecCh
Q 010804 47 KHNFIVVEFY-APWCGHCKK-LAPEYEKAASELSSHDPPV-VLAKVDANE 93 (500)
Q Consensus 47 ~~~~~lv~f~-~~~c~~C~~-~~~~~~~~~~~~~~~~~~v-~~~~vd~~~ 93 (500)
++++++|.|| +.||+.|.. ..|.+.++++++++.+ + .+..|+.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG--VDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT--CCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCC
Confidence 6778888887 999999999 9999999999997654 6 666666543
No 434
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.10 E-value=8.6e-06 Score=68.39 Aligned_cols=79 Identities=13% Similarity=0.139 Sum_probs=55.1
Q ss_pred ccCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhcCCCCCeE-EEEEecChh---------------------hhHHHHH
Q 010804 46 SKHNFIVVEFY-APWCGHCK-KLAPEYEKAASELSSHDPPVV-LAKVDANEE---------------------ANKELAS 101 (500)
Q Consensus 46 ~~~~~~lv~f~-~~~c~~C~-~~~~~~~~~~~~~~~~~~~v~-~~~vd~~~~---------------------~~~~~~~ 101 (500)
-++++++|.|| +.||++|. ...|.+.++++++++.+ +. +..|+.+.. +..++++
T Consensus 33 ~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~--v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
T 1tp9_A 33 VAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG--VTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTH 110 (162)
T ss_dssp HTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHH
T ss_pred hCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHH
Confidence 36789999999 89999999 89999999999997655 44 444443321 1123666
Q ss_pred hcCcc-----------cccEEEEEecCCceeeecCCC
Q 010804 102 QYEIR-----------GFPTIKILRNGGKTIQEYKGP 127 (500)
Q Consensus 102 ~~~i~-----------~~P~~~~~~~~~~~~~~~~g~ 127 (500)
+||+. ..|+.++++ +|+....+.|.
T Consensus 111 ~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 111 ALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp HTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred HcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 66665 268888887 66766555543
No 435
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.07 E-value=3.7e-06 Score=75.66 Aligned_cols=87 Identities=14% Similarity=0.190 Sum_probs=63.7
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------------------------------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN--------------------------------- 438 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--------------------------------- 438 (500)
+.+.+++.|+++||++|+.+.+.+.++.+. + ++.+..++....
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l 171 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKL 171 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCC
Confidence 356789999999999999999998887654 2 577766655210
Q ss_pred -----------------CCCCCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhc
Q 010804 439 -----------------DIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNR 482 (500)
Q Consensus 439 -----------------~~~~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 482 (500)
....++++++++|++++.+.+++..++.|..+.+.|.++|++..
T Consensus 172 ~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 172 NVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred CccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 00123578999999999865555557889999999999987654
No 436
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.04 E-value=1e-06 Score=69.23 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=55.7
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----hHHHHHhcCcccccEEEE
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA-----NKELASQYEIRGFPTIKI 113 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----~~~~~~~~~i~~~P~~~~ 113 (500)
+.+..++..++ ++.|+++||++|+++.+.+.+.... .++ +..+|++.++ ..++.+.+|+.++|++++
T Consensus 10 ~~~~~~i~~~~--vv~f~~~~Cp~C~~~~~~L~~~~~~----~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 10 EFVQQRLANNK--VTIFVKYTCPFCRNALDILNKFSFK----RGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp HHHHTTCCTTC--EEEEECTTCHHHHHHHHHHTTSCBC----TTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHhccCC--EEEEEeCCChhHHHHHHHHHHcCCC----cCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 34555665553 6779999999999998877643211 111 6777777654 124888999999999854
Q ss_pred EecCCceeeecCC---CCCHHHHHHHHHh
Q 010804 114 LRNGGKTIQEYKG---PREADGIVEYLKK 139 (500)
Q Consensus 114 ~~~~~~~~~~~~g---~~~~~~l~~~i~~ 139 (500)
+ |+.+..+.+ ..+...|.+++..
T Consensus 82 --~-g~~igg~~~~~~~~~~~~L~~~L~~ 107 (114)
T 2hze_A 82 --G-KTSIGGYSDLLEIDNMDALGDILSS 107 (114)
T ss_dssp --T-TEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred --C-CEEEeCcHHHHHHHHCChHHHHHHH
Confidence 3 455443322 1123445555543
No 437
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.02 E-value=3.5e-05 Score=67.71 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=66.1
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----CC-C------CC------CCCc-------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----DI-P------GD------TFEV------- 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----~~-~------~~------~~~i------- 447 (500)
.++.++|+||++||++|+ ..|.|+++..+++.. ++.++.|.++.. +. . ++ ++++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d 132 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEK 132 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEee
Confidence 378999999999999999 789999999998653 688888875421 00 0 00 1110
Q ss_pred ------------------------------------------CcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcCC
Q 010804 448 ------------------------------------------QGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 448 ------------------------------------------~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~~ 484 (500)
...|+.++++++|+++ ++.|..+.++|.+.|++.+.+
T Consensus 133 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 133 GDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred eccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0116889998888855 777888899999999987754
No 438
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.97 E-value=2.9e-05 Score=65.75 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=59.2
Q ss_pred cCccChhhhh-ccCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------
Q 010804 36 LDHSNFSDTV-SKHNFIVVEFY-APWCGHCK-KLAPEYEKAASELSSHDPPVVLAKVDANEEA----------------- 95 (500)
Q Consensus 36 l~~~~~~~~~-~~~~~~lv~f~-~~~c~~C~-~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 95 (500)
.+.+.+...- -+++++++.|| +.||+.|. ...|.+.++++++++.+-.+.. .+..+...
T Consensus 30 ~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~-~iS~D~~~~~~~f~~~~~~~~~fp~ 108 (173)
T 3mng_A 30 EPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVA-CLSVNDAFVTGEWGRAHKAEGKVRL 108 (173)
T ss_dssp STTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEE-EEESSCHHHHHHHHHHTTCTTTCEE
T ss_pred CCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE-EEcCCCHHHHHHHHHHhCCCCceEE
Confidence 4444444332 25666666555 99999999 5889999999999876533332 25443311
Q ss_pred ----hHHHHHhcCcc-------------cccEEEEEecCCceeeecCCC----CCHHHHHHHH
Q 010804 96 ----NKELASQYEIR-------------GFPTIKILRNGGKTIQEYKGP----READGIVEYL 137 (500)
Q Consensus 96 ----~~~~~~~~~i~-------------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i 137 (500)
..+++++||+. ..|+.++.+ +|+..+.+.+. ++.++..+.+
T Consensus 109 l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl 170 (173)
T 3mng_A 109 LADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNII 170 (173)
T ss_dssp EECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHH
T ss_pred EECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHH
Confidence 12366666654 237777777 66665554442 3444444443
No 439
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.97 E-value=6.5e-05 Score=63.50 Aligned_cols=94 Identities=13% Similarity=0.162 Sum_probs=71.8
Q ss_pred hccCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChhh-------------hHHHHHh---cCc
Q 010804 45 VSKHNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEEA-------------NKELASQ---YEI 105 (500)
Q Consensus 45 ~~~~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~-------------~~~~~~~---~~i 105 (500)
.+++|+++|+++++||..|..+.... ..+.+.++.+ +.+...|.+... ...++.. +++
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~n---fV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~ 128 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQN---FITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKT 128 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHT---EEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCS
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcC---EEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCC
Confidence 45788999999999999999987432 3344455444 899999988776 2234444 899
Q ss_pred ccccEEEEEecC---CceeeecCCCCCHHHHHHHHHhhc
Q 010804 106 RGFPTIKILRNG---GKTIQEYKGPREADGIVEYLKKQS 141 (500)
Q Consensus 106 ~~~P~~~~~~~~---~~~~~~~~g~~~~~~l~~~i~~~~ 141 (500)
.++|++.++... ++.+.+..|..+.+++.+.+.+.+
T Consensus 129 ~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 129 DQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp TTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999999643 356788999999999998887654
No 440
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.96 E-value=3.7e-05 Score=65.78 Aligned_cols=88 Identities=15% Similarity=0.157 Sum_probs=56.3
Q ss_pred cCCeE-EEEEECCCChhhhh-hhHHHHHHHHHhcCCCCCeE-EEEEecChhh---------------------hHHHHHh
Q 010804 47 KHNFI-VVEFYAPWCGHCKK-LAPEYEKAASELSSHDPPVV-LAKVDANEEA---------------------NKELASQ 102 (500)
Q Consensus 47 ~~~~~-lv~f~~~~c~~C~~-~~~~~~~~~~~~~~~~~~v~-~~~vd~~~~~---------------------~~~~~~~ 102 (500)
+++++ |+.|++.||+.|.. ..|.+.++++++++.+ +. +..|+.+... ..+++++
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~ 132 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKA 132 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHH
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHH
Confidence 56655 44556999999999 6999999999998765 44 5566554411 1236666
Q ss_pred cCccc-----------ccEEEEEecCCceeeecCC----CCCHHHHHHHH
Q 010804 103 YEIRG-----------FPTIKILRNGGKTIQEYKG----PREADGIVEYL 137 (500)
Q Consensus 103 ~~i~~-----------~P~~~~~~~~~~~~~~~~g----~~~~~~l~~~i 137 (500)
||+.. .|+.++.+ +|+....+.| ..+...+.+.+
T Consensus 133 yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~~~~~~vL 181 (184)
T 3uma_A 133 IGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPGQATASGAAAML 181 (184)
T ss_dssp TTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTTCCSTTSHHHHH
T ss_pred cCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcCCCHHHHH
Confidence 77642 46677776 5677666544 33444444443
No 441
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.93 E-value=6e-05 Score=66.79 Aligned_cols=90 Identities=18% Similarity=0.155 Sum_probs=67.0
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh-----------------------------hHHHH
Q 010804 50 FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA-----------------------------NKELA 100 (500)
Q Consensus 50 ~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------------~~~~~ 100 (500)
.+|+.|++.||+.|....+.+.++++++++.+ +.+..|+++... ..+++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va 111 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRN--VKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA 111 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH
Confidence 45555679999999999999999999997654 777777665421 12366
Q ss_pred HhcCcc------------cccEEEEEecCCceeeecCCC----CCHHHHHHHHHhhc
Q 010804 101 SQYEIR------------GFPTIKILRNGGKTIQEYKGP----READGIVEYLKKQS 141 (500)
Q Consensus 101 ~~~~i~------------~~P~~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 141 (500)
+.||+. .+|++++++.+|+....+.|. ++.+++.+.|....
T Consensus 112 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 112 ILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 777763 379999999888887776543 57888888887643
No 442
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.92 E-value=6.6e-05 Score=64.91 Aligned_cols=43 Identities=26% Similarity=0.491 Sum_probs=36.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN 92 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 92 (500)
.+++++|.|+++||+||.++.|.+.++.+.+.+ ++.|..++..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~---~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD---DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT---TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC---CeEEEEecCC
Confidence 468899999999999999999999999888765 3888877753
No 443
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.91 E-value=5.8e-06 Score=67.77 Aligned_cols=87 Identities=18% Similarity=0.249 Sum_probs=55.1
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh---hh--HHHHHhcCcccccEEEE
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE---AN--KELASQYEIRGFPTIKI 113 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~--~~~~~~~~i~~~P~~~~ 113 (500)
+.++.++.+++ ++.|+++||++|+.+.+.+.++. +.+..+|++.+ +. .++++.+|+.++|++++
T Consensus 40 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~~k~~L~~~~---------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi 108 (146)
T 2ht9_A 40 NQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 108 (146)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHHHHHhcCCC--EEEEECCCChhHHHHHHHHHHcC---------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEE
Confidence 35667776664 34499999999999999888652 23445555543 21 24888999999999843
Q ss_pred EecCCceeeecC---CCCCHHHHHHHHHh
Q 010804 114 LRNGGKTIQEYK---GPREADGIVEYLKK 139 (500)
Q Consensus 114 ~~~~~~~~~~~~---g~~~~~~l~~~i~~ 139 (500)
+ |+.+..+. +......|.+++..
T Consensus 109 --~-G~~igG~d~l~~l~~~g~L~~~L~~ 134 (146)
T 2ht9_A 109 --N-GTFIGGATDTHRLHKEGKLLPLVHQ 134 (146)
T ss_dssp --T-TEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred --C-CEEEeCchHHHHHHHcChHHHHHHH
Confidence 3 45544332 22233456666655
No 444
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.90 E-value=0.00018 Score=58.95 Aligned_cols=113 Identities=11% Similarity=0.186 Sum_probs=83.4
Q ss_pred CceEEcCccChhhhhccCCeEEEE-EECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhcCccc--
Q 010804 31 EFVLTLDHSNFSDTVSKHNFIVVE-FYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRG-- 107 (500)
Q Consensus 31 ~~v~~l~~~~~~~~~~~~~~~lv~-f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~-- 107 (500)
.-|..+|.++...+...+-+..++ |....-..-..+.+.+.++|+.++++ +.|+.+|.+........+.+|+..
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk---i~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT---CEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc---eEEEEEecchHhHHHHHHHcCCCccc
Confidence 457889999999998777666555 44333344567889999999999876 999999984333333889999986
Q ss_pred ccEEEEEec-CCceeeecC-CCCCHHHHHHHHHhhcCCCcc
Q 010804 108 FPTIKILRN-GGKTIQEYK-GPREADGIVEYLKKQSGPASA 146 (500)
Q Consensus 108 ~P~~~~~~~-~~~~~~~~~-g~~~~~~l~~~i~~~~~~~~~ 146 (500)
.|+++++.. +....+.+. +..+.+.|.+|++..+...+.
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 899999975 212224444 788999999999998865553
No 445
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.90 E-value=5.2e-06 Score=66.77 Aligned_cols=88 Identities=18% Similarity=0.237 Sum_probs=56.2
Q ss_pred cChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh---hh--HHHHHhcCcccccEEEE
Q 010804 39 SNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE---AN--KELASQYEIRGFPTIKI 113 (500)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~--~~~~~~~~i~~~P~~~~ 113 (500)
+.+..++..++ ++.|+++||++|+++.+.+.+.. +.+..+|++.+ +. .++.+.+++..+|++++
T Consensus 18 ~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~---------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i 86 (130)
T 2cq9_A 18 NQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 86 (130)
T ss_dssp HHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT---------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEE
T ss_pred HHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC---------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEE
Confidence 34666676664 34499999999999999888652 33445555543 21 23788999999999843
Q ss_pred EecCCceeeecC---CCCCHHHHHHHHHhh
Q 010804 114 LRNGGKTIQEYK---GPREADGIVEYLKKQ 140 (500)
Q Consensus 114 ~~~~~~~~~~~~---g~~~~~~l~~~i~~~ 140 (500)
+ |+.+..+. +......|.+++...
T Consensus 87 --~-G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 87 --N-GTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp --T-TEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred --C-CEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 3 35544332 223444566666654
No 446
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.88 E-value=8.4e-05 Score=63.64 Aligned_cols=89 Identities=13% Similarity=0.309 Sum_probs=64.5
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecC--hhh-----------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDAN--EEA----------------------------- 95 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~----------------------------- 95 (500)
.+++++|.|++-.||||.++.+.+.++.+++.+. +.+..+... ..+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 96 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG---AKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRI 96 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---CEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc---eEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4578899999999999999999999998887653 445444321 111
Q ss_pred ------------------------------------------hHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHH
Q 010804 96 ------------------------------------------NKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGI 133 (500)
Q Consensus 96 ------------------------------------------~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l 133 (500)
....++++||+++|++++ +|+......|..+.+.+
T Consensus 97 ~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI---NGky~v~~~~~~s~e~~ 173 (184)
T 4dvc_A 97 HTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV---NNRYLVQGQSAKSLDEY 173 (184)
T ss_dssp HTSCCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTTEEECGGGCSSHHHH
T ss_pred HHHhhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE---CCEEeeCCcCCCCHHHH
Confidence 113666789999999987 45655556667788888
Q ss_pred HHHHHhhc
Q 010804 134 VEYLKKQS 141 (500)
Q Consensus 134 ~~~i~~~~ 141 (500)
.+.|+..+
T Consensus 174 ~~~i~~Ll 181 (184)
T 4dvc_A 174 FDLVNYLL 181 (184)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 88777654
No 447
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.88 E-value=1.7e-05 Score=70.12 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=66.2
Q ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC----------------CC------------C
Q 010804 392 SGKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND----------------IP------------G 442 (500)
Q Consensus 392 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~----------------~~------------~ 442 (500)
.++.++|+|| +.||+.|+...|.|.++..+++.. ++.++.|.++... .. .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 3679999999 999999999999999999888532 5777777764310 01 1
Q ss_pred CCCCc-----CcceEEEEEcCCCceE-EecC----CCCHHHHHHHHHhhc
Q 010804 443 DTFEV-----QGYPTVFFRSASGKTV-PYEG----DRTKEDIVDFIENNR 482 (500)
Q Consensus 443 ~~~~i-----~~~P~~~~~~~~~~~~-~~~g----~~~~~~l~~~i~~~~ 482 (500)
+.|++ ..+|+++++++++++. ++.| ..+.+++.+.|+...
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 23566 3689999998888855 4434 357889999888754
No 448
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.86 E-value=7.9e-05 Score=66.28 Aligned_cols=93 Identities=13% Similarity=0.065 Sum_probs=69.3
Q ss_pred cCC-eEEEEEE-CCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh---------------------------hH
Q 010804 47 KHN-FIVVEFY-APWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA---------------------------NK 97 (500)
Q Consensus 47 ~~~-~~lv~f~-~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------------------~~ 97 (500)
.++ ++++.|| +.||+.|....+.+.+++++++..+ +.+..|+++... ..
T Consensus 27 ~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~--v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~ 104 (233)
T 2v2g_A 27 LGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRG--VKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETR 104 (233)
T ss_dssp HCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTC
T ss_pred CCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcC--CEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChH
Confidence 344 8888888 8999999999999999999997654 677777665421 12
Q ss_pred HHHHhcCcc------------cccEEEEEecCCceeeecCC----CCCHHHHHHHHHhhc
Q 010804 98 ELASQYEIR------------GFPTIKILRNGGKTIQEYKG----PREADGIVEYLKKQS 141 (500)
Q Consensus 98 ~~~~~~~i~------------~~P~~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~ 141 (500)
++++.||+. .+|++++++.+|+....+.| .++.+++++.|....
T Consensus 105 ~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 105 ELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 366677764 47999999988887766644 357888888887643
No 449
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.84 E-value=4.3e-05 Score=65.26 Aligned_cols=89 Identities=10% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC---------------------CCCCCCCcCc-
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND---------------------IPGDTFEVQG- 449 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~---------------------~~~~~~~i~~- 449 (500)
++.++|+|| +.||+.|....|.|.++..+++.. ++.++.|..+... ...+.|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 568888888 999999999999999999998653 6777777765311 1112344432
Q ss_pred -----------ceEEEEEcCCCceE-EecCC---CCHHHHHHHHHhhc
Q 010804 450 -----------YPTVFFRSASGKTV-PYEGD---RTKEDIVDFIENNR 482 (500)
Q Consensus 450 -----------~P~~~~~~~~~~~~-~~~g~---~~~~~l~~~i~~~~ 482 (500)
.|+++++++++++. .+.+. ...+++++.|++..
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHHh
Confidence 68999998888855 45432 44677777776543
No 450
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.83 E-value=1.9e-05 Score=70.78 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=65.0
Q ss_pred CC-eEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------------------------CCCCCC
Q 010804 393 GK-NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN---------------------------DIPGDT 444 (500)
Q Consensus 393 ~~-~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~---------------------------~~~~~~ 444 (500)
++ .++++|++.||+.|....+.|.++...++.. ++.++.|+++.. ..+.+.
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 45 4566789999999999999999999998642 688888877531 111234
Q ss_pred CCcC-------cceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhhc
Q 010804 445 FEVQ-------GYPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENNR 482 (500)
Q Consensus 445 ~~i~-------~~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~~ 482 (500)
|++. .+|+++++++++++. .+.|. ++.++|.+.|+...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 5665 899999998888754 33333 57899999987653
No 451
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.80 E-value=1.6e-06 Score=68.10 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=50.3
Q ss_pred CeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-------CCCCCCCcCcceEEEEEcCCCceEEec
Q 010804 394 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND-------IPGDTFEVQGYPTVFFRSASGKTVPYE 466 (500)
Q Consensus 394 ~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-------~~~~~~~i~~~P~~~~~~~~~~~~~~~ 466 (500)
...+++|+++||++|+.+.+.|.++.... .+ |..+|++.++ .+.+.+++.++|+++ + +|..+..+.
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~-i-~g~~igg~~ 90 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR---GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIF-F-GKTSIGGYS 90 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT---TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE-E-TTEEEESHH
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc---Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEE-E-CCEEEeCcH
Confidence 34577899999999999999887643221 12 7778888765 345567899999874 4 343222222
Q ss_pred C---CCCHHHHHHHHHh
Q 010804 467 G---DRTKEDIVDFIEN 480 (500)
Q Consensus 467 g---~~~~~~l~~~i~~ 480 (500)
+ ..+.+.|.++|+.
T Consensus 91 ~~~~~~~~~~L~~~L~~ 107 (114)
T 2hze_A 91 DLLEIDNMDALGDILSS 107 (114)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHCChHHHHHHH
Confidence 1 1123456666654
No 452
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.80 E-value=1.1e-05 Score=69.91 Aligned_cols=43 Identities=23% Similarity=0.396 Sum_probs=37.0
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT 436 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~ 436 (500)
+.+.+++.|+++||++|+.+.|.+.++.+.+.. ++.|..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEehh
Confidence 467899999999999999999999999998876 6777777663
No 453
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.80 E-value=3.9e-05 Score=64.06 Aligned_cols=86 Identities=10% Similarity=0.012 Sum_probs=55.9
Q ss_pred CeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------------------CCCCCCCCcCcce
Q 010804 394 KNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN---------------------DIPGDTFEVQGYP 451 (500)
Q Consensus 394 ~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~---------------------~~~~~~~~i~~~P 451 (500)
+.++|+|| +.||+.|+...|.|.++...++.. + .++.|..+.. ....+.|++...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-A-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-C-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-C-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 47888887 899999999999999999998754 3 5555555421 1123357777788
Q ss_pred ------EEEEEcCCCceE-EecCCCCH---HHHHHHHHhhc
Q 010804 452 ------TVFFRSASGKTV-PYEGDRTK---EDIVDFIENNR 482 (500)
Q Consensus 452 ------~~~~~~~~~~~~-~~~g~~~~---~~l~~~i~~~~ 482 (500)
+.+++ +++++. ++.|.... +.+.+.|.+.+
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l 153 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVA 153 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHH
T ss_pred cCCccceEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHH
Confidence 56666 556644 56665443 44444444433
No 454
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.79 E-value=0.00012 Score=63.86 Aligned_cols=90 Identities=17% Similarity=0.083 Sum_probs=64.3
Q ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC-----CCC------CC------CCCc-------
Q 010804 392 SGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN-----DIP------GD------TFEV------- 447 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-----~~~------~~------~~~i------- 447 (500)
.++.++|+||++||++| ...|.|.++..+++.. ++.++.|+++.. +.. .+ ++++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d 114 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEK 114 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeE
Confidence 36899999999999999 6789999999998653 688887775310 000 00 1110
Q ss_pred ------------------------------------------CcceEEEEEcCCCceE-EecCCCCHHHHHHHHHhhcC
Q 010804 448 ------------------------------------------QGYPTVFFRSASGKTV-PYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 448 ------------------------------------------~~~P~~~~~~~~~~~~-~~~g~~~~~~l~~~i~~~~~ 483 (500)
...|+.++++++|++. ++.|..+.++|.+.|++.+.
T Consensus 115 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 115 GDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMR 193 (207)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred eccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 1116889998888855 77788888999999887764
No 455
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.79 E-value=2.6e-06 Score=65.78 Aligned_cols=78 Identities=15% Similarity=0.240 Sum_probs=49.2
Q ss_pred EEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-------CCCCCCCcCcceEEEEEcCCCceEEec--
Q 010804 396 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND-------IPGDTFEVQGYPTVFFRSASGKTVPYE-- 466 (500)
Q Consensus 396 ~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-------~~~~~~~i~~~P~~~~~~~~~~~~~~~-- 466 (500)
.+++|+++||++|+.+.+.|.++...+. + +..+|++.++ .+.+.+++.++|++ ++ .|..+..+.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i-~~-~g~~i~g~~~~ 85 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV-FI-GKECIGGCTDL 85 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE-EE-TTEEEESHHHH
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE-EE-CCEEEeccHHH
Confidence 3677999999999999999987643322 2 5556776653 23445788999997 33 343222222
Q ss_pred -CCCCHHHHHHHHHh
Q 010804 467 -GDRTKEDIVDFIEN 480 (500)
Q Consensus 467 -g~~~~~~l~~~i~~ 480 (500)
+......|.++|+.
T Consensus 86 ~~~~~~g~L~~~l~~ 100 (105)
T 1kte_A 86 ESMHKRGELLTRLQQ 100 (105)
T ss_dssp HHHHHHTHHHHHHHH
T ss_pred HHHHHCCcHHHHHHH
Confidence 11235667777764
No 456
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.77 E-value=0.00019 Score=60.62 Aligned_cols=93 Identities=17% Similarity=0.156 Sum_probs=68.9
Q ss_pred CCeEEEEEECCCCh-hHhhhhHHHHHHHHHcCC-CCceEEEEEeCCCCCC---------------C--------------
Q 010804 393 GKNVLLEFYAPWCG-HCKKLAPILDEVAVSYQN-DADVVIAKFDATANDI---------------P-------------- 441 (500)
Q Consensus 393 ~~~~~v~f~~~~c~-~c~~~~~~~~~~~~~~~~-~~~~~~~~id~~~~~~---------------~-------------- 441 (500)
++.++|+||++||+ .|....+.+.++...++. ..++.++.|.++..+. +
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 699999999999999853 2357777766652110 0
Q ss_pred --CCC---------CCcCcceEEEEEcCCCceE-EecCC-CCHHHHHHHHHhhcCCC
Q 010804 442 --GDT---------FEVQGYPTVFFRSASGKTV-PYEGD-RTKEDIVDFIENNRDKA 485 (500)
Q Consensus 442 --~~~---------~~i~~~P~~~~~~~~~~~~-~~~g~-~~~~~l~~~i~~~~~~~ 485 (500)
.+. +.+...|+++++++++++. .+.|. .+.++|.+.|++.....
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 001 2245678999998888866 56675 78999999999887654
No 457
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.76 E-value=5.4e-05 Score=66.50 Aligned_cols=89 Identities=11% Similarity=0.181 Sum_probs=65.7
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC----------------CC------------CC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND----------------IP------------GD 443 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~----------------~~------------~~ 443 (500)
++.++|+|| +.||++|....|.|.++..+++.. ++.++.|.++... .. .+
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 679999999 999999999999999999988642 6777777764310 00 12
Q ss_pred CCCcC------cceEEEEEcCCCceE-EecCC----CCHHHHHHHHHhhc
Q 010804 444 TFEVQ------GYPTVFFRSASGKTV-PYEGD----RTKEDIVDFIENNR 482 (500)
Q Consensus 444 ~~~i~------~~P~~~~~~~~~~~~-~~~g~----~~~~~l~~~i~~~~ 482 (500)
.|++. .+|+++++++++++. ++.|. .+.+++.+.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 35553 599999998888855 44342 47788998888754
No 458
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.76 E-value=5.7e-05 Score=64.94 Aligned_cols=89 Identities=11% Similarity=0.052 Sum_probs=64.5
Q ss_pred CCeEEEEEEC-CCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-------------CC------------CCCCC
Q 010804 393 GKNVLLEFYA-PWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND-------------IP------------GDTFE 446 (500)
Q Consensus 393 ~~~~~v~f~~-~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-------------~~------------~~~~~ 446 (500)
++.++|+||+ .||+.|+...|.|.++..+++.. ++.++.|..+... .. .+.|+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 6789999995 89999999999999999888542 5777777664310 01 12355
Q ss_pred cC------cceEEEEEcCCCceE-EecCCC----CHHHHHHHHHhhc
Q 010804 447 VQ------GYPTVFFRSASGKTV-PYEGDR----TKEDIVDFIENNR 482 (500)
Q Consensus 447 i~------~~P~~~~~~~~~~~~-~~~g~~----~~~~l~~~i~~~~ 482 (500)
+. .+|+.+++++++++. ++.|.. +.+++.+.|+...
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 54 379999998888855 454533 6888988888754
No 459
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.75 E-value=7.4e-05 Score=65.99 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=66.4
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--------------------------hHHHHHhc
Q 010804 50 FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--------------------------NKELASQY 103 (500)
Q Consensus 50 ~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~~~~~~ 103 (500)
.+|+.|++.||+.|....+.+.+++++++..+ +.+..|+++... ...+++.|
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~y 111 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLN--CKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKL 111 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHh
Confidence 44444579999999999999999999997654 777777765421 12466777
Q ss_pred Ccc------------cccEEEEEecCCceeeecCC----CCCHHHHHHHHHhhc
Q 010804 104 EIR------------GFPTIKILRNGGKTIQEYKG----PREADGIVEYLKKQS 141 (500)
Q Consensus 104 ~i~------------~~P~~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~ 141 (500)
|+. .+|++++++++|+....+.| .++.+++.+.|....
T Consensus 112 gv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 112 KIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp TCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 773 37999999988887766543 367888888887643
No 460
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.73 E-value=0.00022 Score=60.45 Aligned_cols=83 Identities=20% Similarity=0.223 Sum_probs=60.0
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHh--cCCCCCeEEEEEecCh-------------------------------
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASEL--SSHDPPVVLAKVDANE------------------------------- 93 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~--~~~~~~v~~~~vd~~~------------------------------- 93 (500)
.++..++.|+..+||+|..+.+.+..+.+++ .+. +.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf 102 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGK---VERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMF 102 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTS---EEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCc---EEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 4667899999999999999999999998888 432 5555544310
Q ss_pred -------------------h--------------hhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHH
Q 010804 94 -------------------E--------------ANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLK 138 (500)
Q Consensus 94 -------------------~--------------~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 138 (500)
. ....+++++||.++|++++ +| + .+.|..+.+.|.+.|.
T Consensus 103 ~~~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng-~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 103 ATQDEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GE-Y---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HTHHHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TT-E---EECTTCCHHHHHHHHT
T ss_pred HcChhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CC-E---EccCCCCHHHHHHHhc
Confidence 0 0112456789999999766 33 4 4578888888888775
No 461
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.73 E-value=0.00011 Score=63.54 Aligned_cols=42 Identities=26% Similarity=0.476 Sum_probs=35.1
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEec
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA 91 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 91 (500)
.+++.++.|+++|||+|..+.+.+.++.+.+.. ++.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 467889999999999999999999999988754 377766654
No 462
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.73 E-value=2.1e-05 Score=66.64 Aligned_cols=69 Identities=14% Similarity=0.278 Sum_probs=48.8
Q ss_pred cC-CeEEEEEECCCChhhhhh-hHHHHHHHHHhcCCCCCeE-EEEEecChh-hhHHHHHhcCcc-cccEEEEEecCCc
Q 010804 47 KH-NFIVVEFYAPWCGHCKKL-APEYEKAASELSSHDPPVV-LAKVDANEE-ANKELASQYEIR-GFPTIKILRNGGK 119 (500)
Q Consensus 47 ~~-~~~lv~f~~~~c~~C~~~-~~~~~~~~~~~~~~~~~v~-~~~vd~~~~-~~~~~~~~~~i~-~~P~~~~~~~~~~ 119 (500)
++ +++|+.||+.||++|... .|.+.++++++++.+ +. +..|+.+.. ...++++++++. .+| ++.+.++.
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g--~~~vv~Is~d~~~~~~~~~~~~~~~~~fp--~l~D~~~~ 115 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG--VDSVICVAINDPYTVNAWAEKIQAKDAIE--FYGDFDGS 115 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT--CSEEEEEESSCHHHHHHHHHHTTCTTTSE--EEECTTCH
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCCHHHHHHHHHHhCCCCceE--EEECCccH
Confidence 44 467778899999999998 999999999997655 55 666665532 233477888873 566 34555433
No 463
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.72 E-value=6.9e-05 Score=55.98 Aligned_cols=71 Identities=14% Similarity=0.189 Sum_probs=49.0
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecCh--h-h----hHHHHHhcCcccccEEEEEecCCceeeec
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANE--E-A----NKELASQYEIRGFPTIKILRNGGKTIQEY 124 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~-~----~~~~~~~~~i~~~P~~~~~~~~~~~~~~~ 124 (500)
++.|+++||++|++..+.+.+.. +.+-.+|.+. . . ..++.+.+++..+|++++ +| +.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g---------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g-~~---- 77 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG---------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GD-KH---- 77 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TT-EE----
T ss_pred EEEEECCCChHHHHHHHHHHHcC---------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CC-EE----
Confidence 67789999999999988777642 2234455442 1 1 134778899999999987 33 43
Q ss_pred CCCCCHHHHHHHHH
Q 010804 125 KGPREADGIVEYLK 138 (500)
Q Consensus 125 ~g~~~~~~l~~~i~ 138 (500)
-|..+.+.|.+++.
T Consensus 78 i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 78 VLGYNEEKLKELIR 91 (92)
T ss_dssp EESCCHHHHHHHHH
T ss_pred EeCCCHHHHHHHhc
Confidence 23458888888875
No 464
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.72 E-value=0.00015 Score=61.31 Aligned_cols=85 Identities=11% Similarity=0.082 Sum_probs=61.2
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC-----------------------CCCCCCCCCcC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA-----------------------NDIPGDTFEVQ 448 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~-----------------------~~~~~~~~~i~ 448 (500)
++.++|+|| +.||+.|+...|.+.++...+ . ++.++.|..+. +... +.|++.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~ 122 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVL 122 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCB
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCE
Confidence 678999998 799999999999999998877 3 56666665532 1112 345543
Q ss_pred ---------cceEEEEEcCCCceE-EecC-----CCCHHHHHHHHHhh
Q 010804 449 ---------GYPTVFFRSASGKTV-PYEG-----DRTKEDIVDFIENN 481 (500)
Q Consensus 449 ---------~~P~~~~~~~~~~~~-~~~g-----~~~~~~l~~~i~~~ 481 (500)
..|+++++++++++. ++.| ..+.+++.+.|++.
T Consensus 123 ~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 123 IGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp BCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred ecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 269999998888855 4432 45678888888764
No 465
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.70 E-value=0.0002 Score=51.98 Aligned_cols=70 Identities=17% Similarity=0.274 Sum_probs=47.0
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--hHHHHHhcCcccccEEEEEecCCceeeecCCCCC
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--NKELASQYEIRGFPTIKILRNGGKTIQEYKGPRE 129 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~ 129 (500)
++.|+++||++|+++.+.+.+. + +.+..+|++.++ ..++.+.+++.++|++++ +| +.+. |
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~--i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~--~g-~~i~---g--- 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------G--VSFQELPIDGNAAKREEMIKRSGRTTVPQIFI--DA-QHIG---G--- 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------T--CCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE--TT-EEEE---S---
T ss_pred EEEEECCCChhHHHHHHHHHHC-------C--CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE--CC-EEEe---C---
Confidence 5778999999999998877753 2 445566665532 234777899999999853 33 4432 2
Q ss_pred HHHHHHHHHh
Q 010804 130 ADGIVEYLKK 139 (500)
Q Consensus 130 ~~~l~~~i~~ 139 (500)
.+.+.+++..
T Consensus 65 ~~~i~~~~~~ 74 (82)
T 1fov_A 65 YDDLYALDAR 74 (82)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 3556666554
No 466
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.69 E-value=2.1e-05 Score=65.55 Aligned_cols=88 Identities=18% Similarity=0.298 Sum_probs=55.8
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC---------------------CCCCCCCcC--
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND---------------------IPGDTFEVQ-- 448 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~---------------------~~~~~~~i~-- 448 (500)
++.++|.|| +.||++|+...|.+.++...++.. ++.++.|..+... .+.+.|++.
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 678999998 999999999999999988888543 5777777664311 011224432
Q ss_pred ---------cceEEEEEcCCCceE-Eec-----CCCCHHHHHHHHHhh
Q 010804 449 ---------GYPTVFFRSASGKTV-PYE-----GDRTKEDIVDFIENN 481 (500)
Q Consensus 449 ---------~~P~~~~~~~~~~~~-~~~-----g~~~~~~l~~~i~~~ 481 (500)
..|+++++++++++. ++. +..+.+++.+.|+..
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 468899998888754 332 446788899888653
No 467
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.68 E-value=3.3e-05 Score=57.42 Aligned_cols=75 Identities=17% Similarity=0.300 Sum_probs=53.6
Q ss_pred EEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCC-----CCcCcceEEEEEcCCCceEEecCCCC
Q 010804 396 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDT-----FEVQGYPTVFFRSASGKTVPYEGDRT 470 (500)
Q Consensus 396 ~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~-----~~i~~~P~~~~~~~~~~~~~~~g~~~ 470 (500)
-++.|+.+||++|+.....|.+. ++.|..+|++.++...+. .+.+++|.++ +++| .+ .. ..+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg-~~--l~-~~~ 71 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADG-ST--LT-NPS 71 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTS-CE--EE-SCC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCC-EE--Ee-CCC
Confidence 36789999999999998888763 477788999887544321 2567899975 4333 32 22 368
Q ss_pred HHHHHHHHHhhcC
Q 010804 471 KEDIVDFIENNRD 483 (500)
Q Consensus 471 ~~~l~~~i~~~~~ 483 (500)
.++|.++|.+..+
T Consensus 72 ~~el~~~L~el~g 84 (92)
T 2lqo_A 72 ADEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 8899999988765
No 468
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.66 E-value=0.00012 Score=62.82 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=28.1
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHh
Q 010804 48 HNFIVVEFYAPWCGHCKKLAPEYEKAASEL 77 (500)
Q Consensus 48 ~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~ 77 (500)
+++++|.|++.||+||.++.|.+.++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 678999999999999999999999999887
No 469
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.66 E-value=7.7e-06 Score=68.81 Aligned_cols=92 Identities=12% Similarity=0.209 Sum_probs=64.5
Q ss_pred cCCCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC---------------------CCCCCCCcC
Q 010804 391 NSGKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND---------------------IPGDTFEVQ 448 (500)
Q Consensus 391 ~~~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~---------------------~~~~~~~i~ 448 (500)
..++++++.|| +.||++|+...+.|.++...++.. ++.++.|..+... .+.+.|++.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA-NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc-CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCc
Confidence 35778888888 999999999999999988888643 5777777765311 011234442
Q ss_pred ----------cceEEEEEcCCCceE-Eec-----CCCCHHHHHHHHHhhcC
Q 010804 449 ----------GYPTVFFRSASGKTV-PYE-----GDRTKEDIVDFIENNRD 483 (500)
Q Consensus 449 ----------~~P~~~~~~~~~~~~-~~~-----g~~~~~~l~~~i~~~~~ 483 (500)
..|+++++++++++. ++. +..+.+++++.|++.++
T Consensus 110 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 110 HEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 468899998888754 332 34578899998887654
No 470
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.64 E-value=0.00018 Score=58.83 Aligned_cols=84 Identities=25% Similarity=0.436 Sum_probs=60.8
Q ss_pred ccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEe--c----------------C---------------
Q 010804 46 SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVD--A----------------N--------------- 92 (500)
Q Consensus 46 ~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd--~----------------~--------------- 92 (500)
.+++.+++.|+.++|++|+++.+.+.++ . ++.+...+ . .
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~----~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~ 83 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----T----DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGK 83 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----C----SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----C----ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 3567899999999999999999887643 1 24444332 1 0
Q ss_pred ---------h--hhhHHHHHhcCcccccEEEEEecCCceeeecCCCCCHHHHHHHHHhhcC
Q 010804 93 ---------E--EANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 142 (500)
Q Consensus 93 ---------~--~~~~~~~~~~~i~~~P~~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 142 (500)
. +...++++++||+++|++++ .+| + .+.|..+.+.|.++|.+...
T Consensus 84 ~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG-~---~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 84 FPVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNG-R---TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTS-C---EEESCCCTTHHHHHHHHTSC
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECC-E---EeeCCCCHHHHHHHHHHHHH
Confidence 0 11235788999999999988 444 4 57799999999999987654
No 471
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.63 E-value=1.7e-05 Score=68.70 Aligned_cols=45 Identities=22% Similarity=0.399 Sum_probs=38.6
Q ss_pred cCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecChh
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDANEE 94 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~ 94 (500)
..++++|.||+.||+||+++.|.+ +++++.+.+. +.|..++....
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~---v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG---VKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT---CCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC---CEEEEeccCcC
Confidence 367899999999999999999999 9988888653 88999998653
No 472
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.62 E-value=3e-05 Score=61.06 Aligned_cols=65 Identities=17% Similarity=0.290 Sum_probs=45.7
Q ss_pred ChhhhhccCCeEEEEEECCCChhhhhh-hHHHHHHHHHhcCCCCCeEEEEEecChhh-----hHHHHHhcCcccccEEE
Q 010804 40 NFSDTVSKHNFIVVEFYAPWCGHCKKL-APEYEKAASELSSHDPPVVLAKVDANEEA-----NKELASQYEIRGFPTIK 112 (500)
Q Consensus 40 ~~~~~~~~~~~~lv~f~~~~c~~C~~~-~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----~~~~~~~~~i~~~P~~~ 112 (500)
.+++++..++ ++.|+++||++|+++ .+.+.+.. . ..+.+..+|++.++ ..++.+.+|+..+|+++
T Consensus 17 ~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~----~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vf 87 (118)
T 3c1r_A 17 HVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLK----V--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY 87 (118)
T ss_dssp HHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSC----C--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcC----C--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEE
Confidence 4666666664 566999999999998 76665432 1 12567777777653 23488899999999973
No 473
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.61 E-value=0.00015 Score=65.06 Aligned_cols=88 Identities=10% Similarity=0.173 Sum_probs=65.2
Q ss_pred CCeEEEEEEC-CCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC----------------CC------------CC
Q 010804 393 GKNVLLEFYA-PWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND----------------IP------------GD 443 (500)
Q Consensus 393 ~~~~~v~f~~-~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~----------------~~------------~~ 443 (500)
++.++|+||+ .||+.|....|.|.++...++.. ++.++.|.++... .. .+
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 6799999999 99999999999999999999653 5777777765310 01 12
Q ss_pred CCCcC------cceEEEEEcCCCceE-EecC----CCCHHHHHHHHHhh
Q 010804 444 TFEVQ------GYPTVFFRSASGKTV-PYEG----DRTKEDIVDFIENN 481 (500)
Q Consensus 444 ~~~i~------~~P~~~~~~~~~~~~-~~~g----~~~~~~l~~~i~~~ 481 (500)
.|++. .+|+++++++++++. ++.+ ..+.+++++.|+..
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 35565 689999998888855 3333 35678888888764
No 474
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.60 E-value=0.00043 Score=59.71 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=34.3
Q ss_pred cCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEec
Q 010804 47 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA 91 (500)
Q Consensus 47 ~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 91 (500)
.+++.++.|+.++||+|..+.+.+.++.+.+.+ ++.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 456789999999999999999999999888754 377766654
No 475
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.58 E-value=0.00014 Score=62.58 Aligned_cols=42 Identities=19% Similarity=0.352 Sum_probs=32.1
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEecC
Q 010804 48 HNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVDAN 92 (500)
Q Consensus 48 ~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~ 92 (500)
.++++|.|++.|||||.++.|.+ ..+.+.+.+. +.|..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQG---SRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTT---CCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCC---CEEEEEech
Confidence 36789999999999999999986 5777666542 666666543
No 476
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.56 E-value=0.00027 Score=52.44 Aligned_cols=77 Identities=25% Similarity=0.452 Sum_probs=52.1
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh--HHHHHh-cCcccccEEEEEecCCceeeecCCC
Q 010804 51 IVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN--KELASQ-YEIRGFPTIKILRNGGKTIQEYKGP 127 (500)
Q Consensus 51 ~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~-~~i~~~P~~~~~~~~~~~~~~~~g~ 127 (500)
.++.|.++|||+|.+.+..+.+ .+ +.|-.+|.+.++. ..+.+. .|.+.+|++++ .+| .... .
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~-------~g--i~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg-~~l~----~ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA-------NR--IAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADG-STLT----N 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH-------TT--CCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTS-CEEE----S
T ss_pred cEEEEcCCCCHhHHHHHHHHHh-------cC--CceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCC-EEEe----C
Confidence 3678899999999999876654 13 6677888877654 123333 27888999855 433 4332 3
Q ss_pred CCHHHHHHHHHhhcC
Q 010804 128 READGIVEYLKKQSG 142 (500)
Q Consensus 128 ~~~~~l~~~i~~~~~ 142 (500)
.+.++|.+++.+..+
T Consensus 70 ~~~~el~~~L~el~g 84 (92)
T 2lqo_A 70 PSADEVKAKLVKIAG 84 (92)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhcC
Confidence 477888888887654
No 477
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.54 E-value=2.7e-05 Score=58.22 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=47.6
Q ss_pred EEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---------CCCCCCCCcCcceEEEEEcCCCceEEecC
Q 010804 397 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN---------DIPGDTFEVQGYPTVFFRSASGKTVPYEG 467 (500)
Q Consensus 397 ~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~---------~~~~~~~~i~~~P~~~~~~~~~~~~~~~g 467 (500)
++.|+++||++|+.+.+.|.++. +.+-.+|++.. +.+.+.+++.++|++++ +++ ..+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g--------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~---~g~---~i~ 79 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG--------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK---GDK---HVL 79 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE---TTE---EEE
T ss_pred EEEEECCCChHHHHHHHHHHHcC--------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE---CCE---EEe
Confidence 66799999999999999888763 33344555532 22223467789999976 332 233
Q ss_pred CCCHHHHHHHHH
Q 010804 468 DRTKEDIVDFIE 479 (500)
Q Consensus 468 ~~~~~~l~~~i~ 479 (500)
..+.+.|.++|+
T Consensus 80 G~~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GYNEEKLKELIR 91 (92)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHhc
Confidence 469999999885
No 478
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.53 E-value=1.1e-05 Score=64.94 Aligned_cols=87 Identities=8% Similarity=0.138 Sum_probs=54.6
Q ss_pred ccchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC---C----CCCCCCcCcceEEE
Q 010804 382 ADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND---I----PGDTFEVQGYPTVF 454 (500)
Q Consensus 382 ~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~---~----~~~~~~i~~~P~~~ 454 (500)
.+.+...+ ..+ . +++|+++||++|+.+.+.|.++. +.|..+|++.++ . +.+.+++.++|+++
T Consensus 17 ~~~~~~~i-~~~-~-vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 17 VNQIQETI-SDN-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp HHHHHHHH-HHS-S-EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred HHHHHHHH-cCC-c-EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 34455555 222 3 44499999999999999998863 345567777652 1 34457889999984
Q ss_pred EEcCCCceEEec---CCCCHHHHHHHHHhh
Q 010804 455 FRSASGKTVPYE---GDRTKEDIVDFIENN 481 (500)
Q Consensus 455 ~~~~~~~~~~~~---g~~~~~~l~~~i~~~ 481 (500)
+ +|..+..+. +....+.|.++|++.
T Consensus 86 -i-~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 86 -V-NGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp -E-TTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred -E-CCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 3 343232322 233455677888765
No 479
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.52 E-value=0.001 Score=55.95 Aligned_cols=91 Identities=20% Similarity=0.335 Sum_probs=61.5
Q ss_pred CCCeEEEEEECCCCh-hHhhhhHHHHHHHHHcCC-CCceEEEEEeCCCC-CCC---------------------------
Q 010804 392 SGKNVLLEFYAPWCG-HCKKLAPILDEVAVSYQN-DADVVIAKFDATAN-DIP--------------------------- 441 (500)
Q Consensus 392 ~~~~~~v~f~~~~c~-~c~~~~~~~~~~~~~~~~-~~~~~~~~id~~~~-~~~--------------------------- 441 (500)
.+|.++|+||.+||+ .|....+.+.++.+.++. ..++.++.|.++-. +.+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~ 110 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLED 110 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHH
Confidence 478999999999997 699999999888877732 23566666655421 110
Q ss_pred ---------------CCCCCcCcceEEEEEcCCCceE-EecCC--CCHHHHHHHHHhhc
Q 010804 442 ---------------GDTFEVQGYPTVFFRSASGKTV-PYEGD--RTKEDIVDFIENNR 482 (500)
Q Consensus 442 ---------------~~~~~i~~~P~~~~~~~~~~~~-~~~g~--~~~~~l~~~i~~~~ 482 (500)
...+.+...|++++++++|++. .|.|. ...+.|.+-|+..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 111 ITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp HHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 0012233458899998888865 56653 45688888887654
No 480
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.52 E-value=0.00011 Score=54.36 Aligned_cols=53 Identities=25% Similarity=0.449 Sum_probs=40.3
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhhHHHHHhc-CcccccEEEE
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQY-EIRGFPTIKI 113 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~~-~i~~~P~~~~ 113 (500)
++.|+++||++|+++.+.+.+. + +.+..+|++.+...++.+.+ ++.++|++++
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~-------~--i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK-------G--VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH-------T--CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------C--CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 6789999999999998888764 1 45677777622233488889 9999999853
No 481
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.50 E-value=0.00027 Score=59.13 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=60.4
Q ss_pred CCCeEEEEEEC-CCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------CC-------------CCCCCCc
Q 010804 392 SGKNVLLEFYA-PWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------DI-------------PGDTFEV 447 (500)
Q Consensus 392 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------~~-------------~~~~~~i 447 (500)
.++.++|+||+ .||++|+...|.+.++..++ . ++.++.|..+.. .. ..+.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCC
Confidence 36789999995 99999999999999998888 3 577777776431 00 0112444
Q ss_pred C----c--ceEEEEEcCCCceE-EecC-----CCCHHHHHHHHHh
Q 010804 448 Q----G--YPTVFFRSASGKTV-PYEG-----DRTKEDIVDFIEN 480 (500)
Q Consensus 448 ~----~--~P~~~~~~~~~~~~-~~~g-----~~~~~~l~~~i~~ 480 (500)
. + .|+++++++++++. ++.| ..+.+++.+.|++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 4 2 39999998888855 4443 3456788888764
No 482
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.48 E-value=1.4e-05 Score=62.96 Aligned_cols=52 Identities=8% Similarity=0.194 Sum_probs=38.5
Q ss_pred EEEEECCCChhHhhh-hHHHHHHHHHcCCCCceEEEEEeCCCCCC-------CCCCCCcCcceEE
Q 010804 397 LLEFYAPWCGHCKKL-APILDEVAVSYQNDADVVIAKFDATANDI-------PGDTFEVQGYPTV 453 (500)
Q Consensus 397 ~v~f~~~~c~~c~~~-~~~~~~~~~~~~~~~~~~~~~id~~~~~~-------~~~~~~i~~~P~~ 453 (500)
++.|+++||++|+.+ .+.|.+... ..+.|..+|++.++. +.+.++..++|++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~-----~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v 86 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV-----PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI 86 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC-----CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE
Confidence 667999999999998 777655431 136777888887653 4445788999987
No 483
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.48 E-value=0.00021 Score=54.63 Aligned_cols=73 Identities=21% Similarity=0.120 Sum_probs=47.7
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh---hhHHH----HHhcCcccccEEEEEecCCceee
Q 010804 50 FIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE---ANKEL----ASQYEIRGFPTIKILRNGGKTIQ 122 (500)
Q Consensus 50 ~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~----~~~~~i~~~P~~~~~~~~~~~~~ 122 (500)
.-++.|+++||++|+++.+.+.+.. +.+-.+|.+.. ...++ .+.+++.++|++++ . ||
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~~---------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~-~~---- 86 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDLG---------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-N-DE---- 86 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHT---------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-T-TT----
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcC---------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-C-CC----
Confidence 3477899999999999998887642 33444555431 11123 23468999999876 2 22
Q ss_pred ecCCCCCHHHHHHHH
Q 010804 123 EYKGPREADGIVEYL 137 (500)
Q Consensus 123 ~~~g~~~~~~l~~~i 137 (500)
++-|..+.+.|.+++
T Consensus 87 ~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 KAIVGFKEKEIRESL 101 (103)
T ss_dssp EEEESCCHHHHHHHT
T ss_pred EEEEcCCHHHHHHHh
Confidence 344567788877765
No 484
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.48 E-value=0.00025 Score=52.39 Aligned_cols=75 Identities=15% Similarity=0.066 Sum_probs=50.1
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--hHHHHHhcCc-----ccccEEEEEecCCceeee
Q 010804 51 IVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--NKELASQYEI-----RGFPTIKILRNGGKTIQE 123 (500)
Q Consensus 51 ~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~~~~~~~i-----~~~P~~~~~~~~~~~~~~ 123 (500)
.++.|+++||++|++....+.+. +-.+.+..+|...++ ..++.+.+|. ..+|++++ +|+.+.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~-------~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i---~g~~i~- 73 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN-------NIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI---DDEHIG- 73 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE---TTEEEE-
T ss_pred EEEEEEcCCChhHHHHHHHHHHc-------CCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE---CCEEEe-
Confidence 47888999999999988766542 223566666665542 2348888888 89999965 334332
Q ss_pred cCCCCCHHHHHHHHHhhc
Q 010804 124 YKGPREADGIVEYLKKQS 141 (500)
Q Consensus 124 ~~g~~~~~~l~~~i~~~~ 141 (500)
..+.+.+++.+.+
T Consensus 74 -----g~~~i~~~~~~~~ 86 (89)
T 3msz_A 74 -----GFTELKANADKIL 86 (89)
T ss_dssp -----SHHHHHHTHHHHT
T ss_pred -----ChHHHHHHHHHHh
Confidence 3556666666544
No 485
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.45 E-value=0.0007 Score=59.28 Aligned_cols=102 Identities=8% Similarity=0.071 Sum_probs=67.9
Q ss_pred eEEcCccChhhhhccCCeEEEEEECCC-Chhhh-----hhhHHHHHHHHHhcCCCCCeEEEEEecChh------------
Q 010804 33 VLTLDHSNFSDTVSKHNFIVVEFYAPW-CGHCK-----KLAPEYEKAASELSSHDPPVVLAKVDANEE------------ 94 (500)
Q Consensus 33 v~~l~~~~~~~~~~~~~~~lv~f~~~~-c~~C~-----~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------ 94 (500)
+...+.+.+...--.+++++|.||..| |+.|. ...+.+.+. +. + +.++.|+++..
T Consensus 33 L~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--g--v~VvgIS~Ds~~~~~~f~~~~gl 105 (224)
T 3keb_A 33 LVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--H--LKLIVITVDSPSSLARARHEHGL 105 (224)
T ss_dssp EEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--T--SEEEEEESSCHHHHHHHHHHHCC
T ss_pred EECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--C--CEEEEEECCCHHHHHHHHHHcCC
Confidence 344444444443346788999999888 99999 777777665 42 2 56666665431
Q ss_pred --------h-hHHHHHhcCccc---------ccEEEEEecCCceeeec-----CCCCCHHHHHHHHHhhc
Q 010804 95 --------A-NKELASQYEIRG---------FPTIKILRNGGKTIQEY-----KGPREADGIVEYLKKQS 141 (500)
Q Consensus 95 --------~-~~~~~~~~~i~~---------~P~~~~~~~~~~~~~~~-----~g~~~~~~l~~~i~~~~ 141 (500)
. ...+++.||+.. .|+.++++.+|...+.. .+..+.+.+++.+....
T Consensus 106 ~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 106 PNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp TTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred CCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 1 134888888764 79999999877776543 24566788888776544
No 486
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.44 E-value=0.00012 Score=56.24 Aligned_cols=63 Identities=16% Similarity=0.296 Sum_probs=44.9
Q ss_pred ChhhhhccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh--HHHHHhcCcccccEEE
Q 010804 40 NFSDTVSKHNFIVVEFYA-----PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN--KELASQYEIRGFPTIK 112 (500)
Q Consensus 40 ~~~~~~~~~~~~lv~f~~-----~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~~~i~~~P~~~ 112 (500)
.++.+++.++ + +.|++ +||++|+++.+.+.+. + +.+..+|++.++. ..+.+.+|+.++|+++
T Consensus 9 ~~~~~i~~~~-v-vvf~~g~~~~~~C~~C~~~~~~L~~~-------~--i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~ 77 (105)
T 2yan_A 9 RLKVLTNKAS-V-MLFMKGNKQEAKCGFSKQILEILNST-------G--VEYETFDILEDEEVRQGLKAYSNWPTYPQLY 77 (105)
T ss_dssp HHHHHHTSSS-E-EEEESBCSSSBCTTHHHHHHHHHHHH-------T--CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHhccCC-E-EEEEecCCCCCCCccHHHHHHHHHHC-------C--CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE
Confidence 4667776665 3 34777 9999999998888764 1 5567777776543 2356678999999984
Q ss_pred E
Q 010804 113 I 113 (500)
Q Consensus 113 ~ 113 (500)
+
T Consensus 78 i 78 (105)
T 2yan_A 78 V 78 (105)
T ss_dssp E
T ss_pred E
Confidence 3
No 487
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.42 E-value=0.00022 Score=64.04 Aligned_cols=88 Identities=10% Similarity=0.198 Sum_probs=60.4
Q ss_pred CCCeEEEEEE-CCCChhHh-hhhHHHHHHHHHcCCCCce-EEEEEeCCCC----------CC------------CCCCCC
Q 010804 392 SGKNVLLEFY-APWCGHCK-KLAPILDEVAVSYQNDADV-VIAKFDATAN----------DI------------PGDTFE 446 (500)
Q Consensus 392 ~~~~~~v~f~-~~~c~~c~-~~~~~~~~~~~~~~~~~~~-~~~~id~~~~----------~~------------~~~~~~ 446 (500)
.++.++|+|| +.||++|+ ...|.|.++...++.. ++ .++.|+.+.. .. ..+.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhC
Confidence 3678999998 99999999 9999999999888542 57 6777766431 10 012345
Q ss_pred cC-----------cceEEEEEcCCCceE-EecCC---------CCHHHHHHHHHhh
Q 010804 447 VQ-----------GYPTVFFRSASGKTV-PYEGD---------RTKEDIVDFIENN 481 (500)
Q Consensus 447 i~-----------~~P~~~~~~~~~~~~-~~~g~---------~~~~~l~~~i~~~ 481 (500)
+. ..|+.+++ +++++. .+.|. .+.+++.+.|+..
T Consensus 111 v~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~ 165 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQ 165 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTT
T ss_pred ceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhhh
Confidence 43 35888888 666644 44443 4678888888754
No 488
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=0.00043 Score=58.40 Aligned_cols=93 Identities=8% Similarity=0.083 Sum_probs=68.6
Q ss_pred hcCCCeEEEEEECCCChhHhhhhHHH---HHHHHHcCCCCceEEEEEeCCCCCC---------------CC---CCCCcC
Q 010804 390 FNSGKNVLLEFYAPWCGHCKKLAPIL---DEVAVSYQNDADVVIAKFDATANDI---------------PG---DTFEVQ 448 (500)
Q Consensus 390 ~~~~~~~~v~f~~~~c~~c~~~~~~~---~~~~~~~~~~~~~~~~~id~~~~~~---------------~~---~~~~i~ 448 (500)
....|.++|+++++||..|..+.... .++.+.++. ++.+..+|++..+. .. +.+++.
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~ 129 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTD 129 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCST
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCC
Confidence 35689999999999999998886422 224444444 69999999987541 12 227899
Q ss_pred cceEEEEEcCCC---c-eEEecCCCCHHHHHHHHHhhcCC
Q 010804 449 GYPTVFFRSASG---K-TVPYEGDRTKEDIVDFIENNRDK 484 (500)
Q Consensus 449 ~~P~~~~~~~~~---~-~~~~~g~~~~~~l~~~i~~~~~~ 484 (500)
++|+++++...+ + +.+..|..+.+++++.|.+.+++
T Consensus 130 ~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~ 169 (178)
T 2ec4_A 130 QFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEI 169 (178)
T ss_dssp TCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999999995432 2 45788999999999999876643
No 489
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.39 E-value=0.00021 Score=64.53 Aligned_cols=88 Identities=10% Similarity=0.160 Sum_probs=63.6
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC----------------CC------------CC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND----------------IP------------GD 443 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~----------------~~------------~~ 443 (500)
++.++|+|| +.||+.|....+.|.++...++.. ++.++.|.++... .. .+
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~-gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 678999998 999999999999999999999653 6777777765321 00 11
Q ss_pred CCCcC------cceEEEEEcCCCceE-EecC----CCCHHHHHHHHHhh
Q 010804 444 TFEVQ------GYPTVFFRSASGKTV-PYEG----DRTKEDIVDFIENN 481 (500)
Q Consensus 444 ~~~i~------~~P~~~~~~~~~~~~-~~~g----~~~~~~l~~~i~~~ 481 (500)
.|++. .+|+++++++++++. ++.+ ..+.+++++.|+..
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 23443 479999998888854 3333 46678888888753
No 490
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.39 E-value=0.00015 Score=56.56 Aligned_cols=63 Identities=19% Similarity=0.403 Sum_probs=42.7
Q ss_pred ChhhhhccCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChh----h--hHHHHHhcCcccccEEEE
Q 010804 40 NFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEE----A--NKELASQYEIRGFPTIKI 113 (500)
Q Consensus 40 ~~~~~~~~~~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~----~--~~~~~~~~~i~~~P~~~~ 113 (500)
.++.++..++ ++.|+++||++|++..+.+.+. + +.+..+|++.. + ...+.+..|+..+|++++
T Consensus 11 ~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~-------~--i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi 79 (113)
T 3rhb_A 11 SIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL-------G--VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFV 79 (113)
T ss_dssp HHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc-------C--CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 4566666766 6779999999999998888753 2 33455555542 1 122555679999999943
No 491
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.37 E-value=0.00011 Score=56.11 Aligned_cols=73 Identities=12% Similarity=0.148 Sum_probs=49.2
Q ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCC-----CCC----CCCCcCcceEEEEEcCCCceE
Q 010804 393 GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAND-----IPG----DTFEVQGYPTVFFRSASGKTV 463 (500)
Q Consensus 393 ~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-----~~~----~~~~i~~~P~~~~~~~~~~~~ 463 (500)
++.-+++|+++||++|+.+.+.|.+.. +.+-.+|++..+ ... +..+..++|++++ .|+
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~--------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--- 86 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG--------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--- 86 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT--------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC--------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---
Confidence 345577799999999999999998763 334445665421 111 1246889999866 232
Q ss_pred EecCCCCHHHHHHHH
Q 010804 464 PYEGDRTKEDIVDFI 478 (500)
Q Consensus 464 ~~~g~~~~~~l~~~i 478 (500)
.+.|..+.+.|.++|
T Consensus 87 ~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 KAIVGFKEKEIRESL 101 (103)
T ss_dssp EEEESCCHHHHHHHT
T ss_pred EEEEcCCHHHHHHHh
Confidence 345668888888876
No 492
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.37 E-value=7.2e-05 Score=56.66 Aligned_cols=53 Identities=9% Similarity=0.206 Sum_probs=39.9
Q ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCCCCCCCC----C-CcCcceEE
Q 010804 393 GKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDT----F-EVQGYPTV 453 (500)
Q Consensus 393 ~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~----~-~i~~~P~~ 453 (500)
...-++.|+++||++|+.+.+.|.+. ++.|..+|++.++...+. . +..++|++
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~--------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i 71 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK--------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI 71 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH--------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC--------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE
Confidence 44567789999999999999999876 355667888876543322 2 77899987
No 493
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.35 E-value=0.0003 Score=59.10 Aligned_cols=84 Identities=18% Similarity=0.180 Sum_probs=58.6
Q ss_pred CCeEEEEEE-CCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC----------C-------------CCCCCCCcC
Q 010804 393 GKNVLLEFY-APWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN----------D-------------IPGDTFEVQ 448 (500)
Q Consensus 393 ~~~~~v~f~-~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~----------~-------------~~~~~~~i~ 448 (500)
+++++|+|| +.||+.|+...|.+.++... .++.++.|..+.. . ...+.|++.
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~----~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~ 121 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK----EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVV 121 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT----TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc----CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCc
Confidence 678899998 78999999999999998766 2567776665431 0 111224555
Q ss_pred c------ceEEEEEcCCCceE-Eec-----CCCCHHHHHHHHHh
Q 010804 449 G------YPTVFFRSASGKTV-PYE-----GDRTKEDIVDFIEN 480 (500)
Q Consensus 449 ~------~P~~~~~~~~~~~~-~~~-----g~~~~~~l~~~i~~ 480 (500)
. .|+++++++++++. ++. +..+.+++.+.|++
T Consensus 122 ~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 122 MEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 3 89999998888855 322 34667888888864
No 494
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.29 E-value=0.00017 Score=59.05 Aligned_cols=82 Identities=24% Similarity=0.470 Sum_probs=58.2
Q ss_pred cCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCC---CC----------------------------
Q 010804 391 NSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA---ND---------------------------- 439 (500)
Q Consensus 391 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~---~~---------------------------- 439 (500)
.+.+.+++.|++++|++|+.+.+.+.++ + ++.++..+.-. .+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~---~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----T---DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----C---SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----C---ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 3567899999999999999999987654 2 35555443321 00
Q ss_pred ----CC-----------CCCCCcCcceEEEEEcCCCceEEecCCCCHHHHHHHHHhhcC
Q 010804 440 ----IP-----------GDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD 483 (500)
Q Consensus 440 ----~~-----------~~~~~i~~~P~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 483 (500)
.. .++++|+++|++++ .+| + .+.|..+.+.|.++|.+...
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG-~--~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNG-R--TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTS-C--EEESCCCTTHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECC-E--EeeCCCCHHHHHHHHHHHHH
Confidence 00 13578999999988 434 3 47798999999999987653
No 495
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.28 E-value=0.0003 Score=54.30 Aligned_cols=64 Identities=19% Similarity=0.285 Sum_probs=45.5
Q ss_pred ccChhhhhccCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh--HHHHHhcCcccccE
Q 010804 38 HSNFSDTVSKHNFIVVEFYA-----PWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN--KELASQYEIRGFPT 110 (500)
Q Consensus 38 ~~~~~~~~~~~~~~lv~f~~-----~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~~~i~~~P~ 110 (500)
.+.++.+++.++ ++.|+. +||++|+++...+... + +.+..+|++.++. ..+.+..|...+|+
T Consensus 5 ~~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~-------~--i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 73 (109)
T 1wik_A 5 SSGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST-------G--VEYETFDILEDEEVRQGLKTFSNWPTYPQ 73 (109)
T ss_dssp CCCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT-------C--SCEEEEESSSCHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc-------C--CCeEEEECCCCHHHHHHHHHHhCCCCCCE
Confidence 345778887776 445667 9999999998877653 2 5677788776543 23566678899998
Q ss_pred EE
Q 010804 111 IK 112 (500)
Q Consensus 111 ~~ 112 (500)
++
T Consensus 74 if 75 (109)
T 1wik_A 74 LY 75 (109)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 496
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.26 E-value=0.00039 Score=52.58 Aligned_cols=56 Identities=14% Similarity=0.241 Sum_probs=39.8
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhhh--HHHHHhc-CcccccEEEE
Q 010804 49 NFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEAN--KELASQY-EIRGFPTIKI 113 (500)
Q Consensus 49 ~~~lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~--~~~~~~~-~i~~~P~~~~ 113 (500)
+.-++.|+++||++|+++.+.+.+. + +.+..+|++.++. .++.+.. +...+|++++
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~-------~--i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRK-------G--VEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHH-------T--CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-------C--CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 4457889999999999999888764 2 4456667666543 2344455 8999999843
No 497
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.26 E-value=0.00053 Score=50.99 Aligned_cols=52 Identities=19% Similarity=0.382 Sum_probs=38.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCCCCCeEEEEEecChhh--hHHHHHhcCcccccEEE
Q 010804 52 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEA--NKELASQYEIRGFPTIK 112 (500)
Q Consensus 52 lv~f~~~~c~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~~~~~~~i~~~P~~~ 112 (500)
++.|+++||++|++..+.+.+. + +.+..+|++.++ ..++.+.+++.++|+++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-------~--i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-------G--AEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------C--CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 6789999999999998877652 2 456667776543 23466788999999763
No 498
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.22 E-value=0.00082 Score=57.77 Aligned_cols=40 Identities=20% Similarity=0.454 Sum_probs=31.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCCCCCeEEEEEe
Q 010804 48 HNFIVVEFYAPWCGHCKKLAPEY---EKAASELSSHDPPVVLAKVD 90 (500)
Q Consensus 48 ~~~~lv~f~~~~c~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd 90 (500)
+++.+|.|++.+||||.++.|.+ ..+.+.+.+. +.+..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~---v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG---TKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT---CCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC---cEEEEEe
Confidence 37889999999999999999986 6888887653 4444444
No 499
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.22 E-value=9.8e-05 Score=60.37 Aligned_cols=86 Identities=8% Similarity=0.137 Sum_probs=51.5
Q ss_pred cchhhhhhcCCCeEEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCCCC---CC----CCCCCCcCcceEEEE
Q 010804 383 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATAN---DI----PGDTFEVQGYPTVFF 455 (500)
Q Consensus 383 ~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~~~---~~----~~~~~~i~~~P~~~~ 455 (500)
+.+...+ ..+ . ++.|+++||++|+.+.+.|.++. +.|..+|++.+ +. +.+.+++.++|+++
T Consensus 40 ~~~~~~i-~~~-~-Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if- 107 (146)
T 2ht9_A 40 NQIQETI-SDN-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 107 (146)
T ss_dssp HHHHHHH-HHC-S-EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE-
T ss_pred HHHHHHh-cCC-C-EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE-
Confidence 4455555 222 3 44499999999999999998763 33455677655 21 34457889999984
Q ss_pred EcCCCceEEec---CCCCHHHHHHHHHhh
Q 010804 456 RSASGKTVPYE---GDRTKEDIVDFIENN 481 (500)
Q Consensus 456 ~~~~~~~~~~~---g~~~~~~l~~~i~~~ 481 (500)
+ +|..+..+. +......|.++|++.
T Consensus 108 i-~G~~igG~d~l~~l~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 108 V-NGTFIGGATDTHRLHKEGKLLPLVHQC 135 (146)
T ss_dssp E-TTEEEESHHHHHHHHHTTCHHHHHHHT
T ss_pred E-CCEEEeCchHHHHHHHcChHHHHHHHc
Confidence 3 343222221 122334567777654
No 500
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.21 E-value=6.1e-05 Score=55.87 Aligned_cols=51 Identities=22% Similarity=0.410 Sum_probs=38.3
Q ss_pred EEEEEECCCChhHhhhhHHHHHHHHHcCCCCceEEEEEeCC--CCCCCCCCC-CcCcceEEE
Q 010804 396 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDAT--ANDIPGDTF-EVQGYPTVF 454 (500)
Q Consensus 396 ~~v~f~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~id~~--~~~~~~~~~-~i~~~P~~~ 454 (500)
.+++|+++||++|+.+.+.|.+. ++.|..+|++ ..+.+.+.+ ++.++|+++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~--------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK--------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH--------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE
Confidence 36789999999999999988875 2456677887 333344456 889999984
Done!