Query 010805
Match_columns 500
No_of_seqs 142 out of 247
Neff 4.3
Searched_HMMs 46136
Date Fri Mar 29 04:45:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010805.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010805hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03094 Mlo: Mlo family; Int 100.0 3E-183 6E-188 1430.8 36.7 445 6-456 1-448 (478)
2 PF06305 DUF1049: Protein of u 53.3 44 0.00096 26.4 5.8 47 17-63 18-64 (68)
3 COG1033 Predicted exporters of 51.8 28 0.0006 40.7 6.0 55 21-75 252-317 (727)
4 PRK11677 hypothetical protein; 47.7 33 0.00073 32.0 4.8 44 16-63 2-45 (134)
5 PF07219 HemY_N: HemY protein 45.5 34 0.00074 29.9 4.3 46 13-58 13-65 (108)
6 TIGR02976 phageshock_pspB phag 36.6 1.1E+02 0.0023 26.1 5.7 29 16-44 3-31 (75)
7 PF01578 Cytochrom_C_asm: Cyto 34.6 1.2E+02 0.0025 29.2 6.5 30 51-80 116-145 (214)
8 TIGR03144 cytochr_II_ccsB cyto 34.1 1.6E+02 0.0035 29.3 7.6 30 51-80 142-171 (243)
9 TIGR03777 RPE4 Rickettsial pal 25.9 32 0.00069 25.0 0.7 9 335-343 24-32 (32)
10 TIGR00540 hemY_coli hemY prote 24.7 96 0.0021 32.8 4.4 37 13-49 38-81 (409)
11 PRK10747 putative protoheme IX 23.0 1E+02 0.0022 32.6 4.2 37 13-49 38-81 (398)
12 COG3114 CcmD Heme exporter pro 22.8 1.2E+02 0.0026 25.5 3.6 40 287-326 9-57 (67)
13 PF15468 DUF4636: Domain of un 21.2 52 0.0011 33.4 1.5 38 257-299 25-62 (243)
14 PF14015 DUF4231: Protein of u 20.9 2.7E+02 0.0058 23.8 5.7 41 19-65 54-94 (112)
No 1
>PF03094 Mlo: Mlo family; InterPro: IPR004326 The Mlo-related proteins are a family of plant integral membrane proteins, first discovered in barley. Mutants lacking wild-type Mlo proteins show broad spectrum resistance to the powdery mildew fungus, and dysregulated cell death control, with spontaneous cell death in response to developmental or abiotic stimuli. Thus wild-type Mlo proteins are thought to be inhibitors of cell death whose deficiency lowers the threshold required to trigger the cascade of events that result in plant cell death. Mlo proteins are localized in the plasma membrane and possess seven transmembrane regions; thus the Mlo family is the only major higher plant family to possess 7 transmembrane domains. It has been suggested that Mlo proteins function as G-protein coupled receptors in plants []; however the molecular and biological functions of Mlo proteins is still unclear.; GO: 0008219 cell death, 0016021 integral to membrane
Probab=100.00 E-value=2.7e-183 Score=1430.85 Aligned_cols=445 Identities=57% Similarity=1.032 Sum_probs=423.3
Q ss_pred CCCCccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 010805 6 SSSNSLEHTPTWVVAVVCFVIVLISFCAERGLHGLGKFLKKNKQDALFEALQKLKEELMLLGFISLLLTVFQDVISHMCI 85 (500)
Q Consensus 6 ~~r~sLe~TPTWaVA~Vc~v~v~iSl~~Er~lH~lgk~lkk~~kkaL~eALeKiK~ELMLLGFISLLLtv~q~~IskICI 85 (500)
|+| |||+|||||||+||++||++|+++||++|++||||+|++||+|++||||+|+|||||||||||||++|++|+||||
T Consensus 1 e~r-sLe~TptW~va~v~~v~v~is~~~E~~lh~l~~~l~~~~~k~L~~aLekik~ELMlLGfiSLlLt~~q~~IskICI 79 (478)
T PF03094_consen 1 EGR-SLEETPTWAVAVVCTVFVVISILLERGLHRLGKWLKKKKRKALYEALEKIKEELMLLGFISLLLTVFQNPISKICI 79 (478)
T ss_pred CCC-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHeec
Confidence 578 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCcCcccccccccccccccccC--CCcccccccCCcccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010805 86 PTYLASHMLPCKMNSVSHEKFSLGTINNRRQLLSE--DTSTEHCAKKGKTPLLSLEALHQLHIFIFVLAVTHVIFCATTM 163 (500)
Q Consensus 86 p~~~~~~~lPC~~~~~~~~~~~~~~~~~~RrlLa~--~~~~~~C~~~GkvpliS~e~lhQLHIFIFvLAv~HV~ys~lTm 163 (500)
|++++++|+||+..++.++.. ....+||+|+. +++.++|++||||||+|.|||||||||||||||+||+|||+||
T Consensus 80 p~~~~~~~lPC~~~~~~~~~~---~~~~~r~ll~~~~~~~~~~C~~kGkvpliS~egLHQLHIFIFVLAV~HV~Ys~lTm 156 (478)
T PF03094_consen 80 PSSYASTMLPCKPPEESSKEG---SSHNRRRLLASGAAEGSDYCPKKGKVPLISAEGLHQLHIFIFVLAVVHVLYSCLTM 156 (478)
T ss_pred ChhHHhcccCCCCcccccccc---cchhhhhhhhhhcccccCcccccCccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999655443211 11268999974 4577899988999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHhcC-CCcCCCCCCcccceeeccccccccccCCcchhHHHHHHHHHHHhhcccchhhHHHHHHH
Q 010805 164 VLAGAKIRQWKHWEDSVRNQ-PQLERDPTKETPRQHHFEFLNKRAIGYWRKAAVVSWLISFFKQFYGSVTKSDYISLRQG 242 (500)
Q Consensus 164 ~Lg~~Kir~Wk~WE~e~~~~-~~~~~~p~~r~~~~~qt~F~~~h~~~~w~~~~~l~wi~cFfrQF~~SV~k~DYltLR~g 242 (500)
+||++|||+||+||+|++++ ++.++||+ |++++||++|+++|. ++|++++++.|++|||||||+||+|+||+|||+|
T Consensus 157 ~Lg~~KIr~Wk~WE~e~~~~~~~~~~d~~-r~~~~~qt~F~r~h~-~~w~~~~~~~wi~~FfrQF~~SV~k~DYltLR~g 234 (478)
T PF03094_consen 157 LLGRAKIRRWKKWEDEAQTDEYQFSNDPR-RFRLTRQTTFVRRHT-SFWSKSPVLSWIVCFFRQFYGSVTKSDYLTLRHG 234 (478)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccCcc-eeeeecccHHHHhhc-CCcccChhHHhHHHHHHHhhccccHHHHHHHHHH
Confidence 99999999999999999995 77888999 999999999999997 8899999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCChHHHHHHHhhhcccceeeechhhHHHHHHHHHhccccchhhhhHhhHHHHHHHHHhhhHHHHHHHHH
Q 010805 243 FIMAHCPTSTSFDFHKYMMRTLEWDFRKVVGIRWYLWLFLVLFLLLNIEGWHTYFWLAFLPLVLLLLVGAKLEHIITRLA 322 (500)
Q Consensus 243 FI~~H~~~~~~FdF~kYi~RsLE~DFk~VVGIS~~lW~~vvlflLlnv~Gw~~yfWlsfiPliliL~VGtKLq~II~~la 322 (500)
||++|+.++++|||||||+||||||||+||||||+||++||+|+|+|++|||+|||++|||++++|+||||||+||++||
T Consensus 235 FI~~H~~~~~~FDFh~Yi~RsLEdDFk~VVGIS~~lW~~vv~fll~nv~gw~~yfW~sfipl~liL~VGtKLq~Ii~~ma 314 (478)
T PF03094_consen 235 FITAHLLPNPKFDFHKYIKRSLEDDFKVVVGISWYLWAFVVLFLLLNVHGWHTYFWLSFIPLILILLVGTKLQHIITKMA 314 (478)
T ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHheeccccHhhhhheeeeecCCcceeEeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCccccCCccCcccCCCCCccccccchHHHHHHHHHHhhhhhHHHHHHHHhhccCCcceeecccceeeceeeeehhhh
Q 010805 323 QDVDPKRRQGQDAGRVKPSDEYFWFQRPAIVLNLIHFILFQNSFEIAFVVWIWCTYGFQSCIMEKLGYIIPRLIIGAIVQ 402 (500)
Q Consensus 323 ~ei~e~~~~v~g~p~v~p~D~lFWF~rP~llL~LIhfiLFQNAFelAfF~W~~~~fG~~SC~~~~~~~ii~Rl~~Gv~vq 402 (500)
+|++|++++++|+|+|||+|++|||+||+|||+||||+|||||||||||+|+||+||++||||++.+++++|+++|+++|
T Consensus 315 ~ei~~~~~~~~g~p~v~p~d~~FWF~rP~llL~lihfilFqnAFela~f~w~~~~~g~~sC~~~~~~~~i~rl~~gv~vq 394 (478)
T PF03094_consen 315 LEIAERHAVIKGTPLVKPSDDLFWFGRPRLLLHLIHFILFQNAFELAFFFWIWWQFGFDSCFMENTEYIIIRLVMGVVVQ 394 (478)
T ss_pred HHHHhccCcccCcccccccccceecCCcHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCceeEecCccceeeehhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccchhhhhhhccccccccccchhHHHHHHHHHHhhhhcCCCCCCcccc
Q 010805 403 VLCSYSTLPLYAIVTQMGGKFKKGIFDDFVQSSLDVWLESSKSKGETSKRQGSI 456 (500)
Q Consensus 403 ~lCSY~TLPLYALVTQMGs~~K~~if~e~v~~~l~~W~~~akk~~~~~~~~~~~ 456 (500)
++|||+|||||||||||||+||++||+|+|+++|++||++||||+..+++..+.
T Consensus 395 ~lcsy~tLPLYaLVTqMGS~~K~~if~e~v~~al~~W~~~ak~~~~~~~~~~~~ 448 (478)
T PF03094_consen 395 VLCSYVTLPLYALVTQMGSHMKKAIFNEQVSKALKKWHKKAKKKKKHKKSAHSG 448 (478)
T ss_pred hhcchhhhhHHHHHhccccccchhhhHHHHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 999999999999999999999999999999999999999999665554444444
No 2
>PF06305 DUF1049: Protein of unknown function (DUF1049); InterPro: IPR010445 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=53.31 E-value=44 Score=26.38 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=31.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhhhhhcCchHHHHHHHHHHHHH
Q 010805 17 WVVAVVCFVIVLISFCAERGLHGLGKFLKKNKQDALFEALQKLKEEL 63 (500)
Q Consensus 17 WaVA~Vc~v~v~iSl~~Er~lH~lgk~lkk~~kkaL~eALeKiK~EL 63 (500)
+-++++.++..++.+++=-.+.....+=.|++.+.+...+++++.|+
T Consensus 18 ~pl~l~il~~f~~G~llg~l~~~~~~~~~r~~~~~~~k~l~~le~e~ 64 (68)
T PF06305_consen 18 LPLGLLILIAFLLGALLGWLLSLPSRLRLRRRIRRLRKELKKLEKEL 64 (68)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555566666666666666555666678888899988886
No 3
>COG1033 Predicted exporters of the RND superfamily [General function prediction only]
Probab=51.83 E-value=28 Score=40.65 Aligned_cols=55 Identities=22% Similarity=0.408 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcCc-----hHHHHHHHHHHHHHH------HHHHHHHHHHH
Q 010805 21 VVCFVIVLISFCAERGLHGLGKFLKKNKQ-----DALFEALQKLKEELM------LLGFISLLLTV 75 (500)
Q Consensus 21 ~Vc~v~v~iSl~~Er~lH~lgk~lkk~~k-----kaL~eALeKiK~ELM------LLGFISLLLtv 75 (500)
....+.++|.+.++.++|...++.+.+++ .|+.+|+.|...=++ -+||+||+.+-
T Consensus 252 s~~~~~llIgiGidy~vh~~nr~~ee~~~~~~~~eAv~~ai~~~g~avl~a~lTT~~GF~Sl~~s~ 317 (727)
T COG1033 252 TSAVPPLLIGIGIDYGVHFHNRYEEERRKGRTVEEAVVEAIKHTGPAVLIAALTTAAGFLSLLTSS 317 (727)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHcc
Confidence 34556778889999999999999987766 477788887776655 37999998764
No 4
>PRK11677 hypothetical protein; Provisional
Probab=47.68 E-value=33 Score=32.02 Aligned_cols=44 Identities=30% Similarity=0.320 Sum_probs=28.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhhhhhcCchHHHHHHHHHHHHH
Q 010805 16 TWVVAVVCFVIVLISFCAERGLHGLGKFLKKNKQDALFEALQKLKEEL 63 (500)
Q Consensus 16 TWaVA~Vc~v~v~iSl~~Er~lH~lgk~lkk~~kkaL~eALeKiK~EL 63 (500)
+|..|++++|+.+ ++=..+.+++..=. ++++.|.+-||+.|.||
T Consensus 2 ~W~~a~i~livG~---iiG~~~~R~~~~~~-~~q~~le~eLe~~k~el 45 (134)
T PRK11677 2 TWEYALIGLVVGI---IIGAVAMRFGNRKL-RQQQALQYELEKNKAEL 45 (134)
T ss_pred cHHHHHHHHHHHH---HHHHHHHhhccchh-hHHHHHHHHHHHHHHHH
Confidence 4888887665543 33334444433211 35678999999999998
No 5
>PF07219 HemY_N: HemY protein N-terminus; InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=45.50 E-value=34 Score=29.94 Aligned_cols=46 Identities=15% Similarity=0.399 Sum_probs=35.0
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHH-------HhhhhhhcCchHHHHHHHH
Q 010805 13 HTPTWVVAVVCFVIVLISFCAERGLHG-------LGKFLKKNKQDALFEALQK 58 (500)
Q Consensus 13 ~TPTWaVA~Vc~v~v~iSl~~Er~lH~-------lgk~lkk~~kkaL~eALeK 58 (500)
||.-|...+++.+++++..++.+.+-. +.+|.++++++.-++||++
T Consensus 13 e~sl~~~~~~l~~~~~~l~ll~~ll~~~~~~p~~~~~~~~~rr~~ka~~al~~ 65 (108)
T PF07219_consen 13 ETSLWVALILLLLLFVVLYLLLRLLRRLLSLPSRVRRWRRRRRRRKAQRALSR 65 (108)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 466788888888888888888888765 5678888888777777764
No 6
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=36.59 E-value=1.1e+02 Score=26.11 Aligned_cols=29 Identities=17% Similarity=0.036 Sum_probs=23.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 010805 16 TWVVAVVCFVIVLISFCAERGLHGLGKFL 44 (500)
Q Consensus 16 TWaVA~Vc~v~v~iSl~~Er~lH~lgk~l 44 (500)
.|.+++-..+|+++-..++-.+||..||=
T Consensus 3 ~~fl~~Pliif~ifVap~wl~lHY~~k~~ 31 (75)
T TIGR02976 3 IFFLAIPLIIFVIFVAPLWLILHYRSKRK 31 (75)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 46677777788888889999999998873
No 7
>PF01578 Cytochrom_C_asm: Cytochrome C assembly protein; InterPro: IPR002541 This entry consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria; CycK from Rhizobium leguminosarum [], CcmC from Escherichia coli and Paracoccus denitrificans [, ] and orf240 from Triticum aestivum (Wheat) mitochondria []. The members of this family are probably integral membrane proteins with six predicted transmembrane helices that may comprise the membrane component of an ABC (ATP binding cassette) transporter complex. This transporter may be necessary for transport of some component needed for cytochrome c assembly. One member, R. leguminosarum CycK, contains a putative haem-binding motif []. Wheat orf240 also contains a putative haem-binding motif and is a proposed ABC transporter with c-type haem as its proposed substrate []. However it seems unlikely that all members of this family transport haem or c-type apocytochromes because P. denitrificans CcmC transports neither [].; GO: 0006461 protein complex assembly, 0008535 respiratory chain complex IV assembly, 0016020 membrane
Probab=34.56 E-value=1.2e+02 Score=29.17 Aligned_cols=30 Identities=33% Similarity=0.609 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 010805 51 ALFEALQKLKEELMLLGFISLLLTVFQDVI 80 (500)
Q Consensus 51 aL~eALeKiK~ELMLLGFISLLLtv~q~~I 80 (500)
+-.+.||++-.-++..||+.+.++..-+.+
T Consensus 116 p~l~~le~~~~~~~~~gf~~lti~l~~G~~ 145 (214)
T PF01578_consen 116 PSLETLERLSYRLILIGFILLTIGLITGAI 145 (214)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 346788999999999999999998876664
No 8
>TIGR03144 cytochr_II_ccsB cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction.
Probab=34.10 E-value=1.6e+02 Score=29.30 Aligned_cols=30 Identities=23% Similarity=0.464 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 010805 51 ALFEALQKLKEELMLLGFISLLLTVFQDVI 80 (500)
Q Consensus 51 aL~eALeKiK~ELMLLGFISLLLtv~q~~I 80 (500)
+=.+.|||+--.....||+-|.+++..+.+
T Consensus 142 p~L~~ld~l~~~~~~~Gf~~ltl~li~G~i 171 (243)
T TIGR03144 142 PLLETLDNLSYRTIAIGFPLLTIGIISGAV 171 (243)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999887765
No 9
>TIGR03777 RPE4 Rickettsial palindromic element RPE4 domain. This model describes protein translations of a family, RPE4, of Rickettsia palindromic elements (RPE). The elements spread within a genome as selfish genetic elements, inserting into genes additional coding region that does not disrupt the reading frame. This model finds RPE-encoded regions in several Rickettsial species and, so far, no where else.
Probab=25.88 E-value=32 Score=25.00 Aligned_cols=9 Identities=44% Similarity=0.649 Sum_probs=7.0
Q ss_pred CcccCCCCC
Q 010805 335 AGRVKPSDE 343 (500)
Q Consensus 335 ~p~v~p~D~ 343 (500)
+|+|||+||
T Consensus 24 D~VvKPR~D 32 (32)
T TIGR03777 24 DPVVKPRDD 32 (32)
T ss_pred ccccccCCC
Confidence 578888886
No 10
>TIGR00540 hemY_coli hemY protein. This is an uncharacterized protein encoded next to a heme-biosynthetic enzyme in two gamma division proteobacteria (E. coli and H. influenzae). It is known in no other species. The gene symbol hemY is unfortunate in that an unrelated protein, protoporphyrinogen oxidase, is designated as HemG in E. coli but as HemY in Bacillus subtilis.
Probab=24.73 E-value=96 Score=32.77 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=25.6
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHHH-------HHhhhhhhcCc
Q 010805 13 HTPTWVVAVVCFVIVLISFCAERGLH-------GLGKFLKKNKQ 49 (500)
Q Consensus 13 ~TPTWaVA~Vc~v~v~iSl~~Er~lH-------~lgk~lkk~~k 49 (500)
+|+-|..+++..+++++.+++++++. .+.+|..++++
T Consensus 38 e~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~r~~ 81 (409)
T TIGR00540 38 EMSITGLAIFFIIALAIIFAFEWGLRRFFRLGAHSRGWFSGRKR 81 (409)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 46677777666666666778889985 44568777554
No 11
>PRK10747 putative protoheme IX biogenesis protein; Provisional
Probab=23.04 E-value=1e+02 Score=32.57 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=28.0
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHH-------HhhhhhhcCc
Q 010805 13 HTPTWVVAVVCFVIVLISFCAERGLHG-------LGKFLKKNKQ 49 (500)
Q Consensus 13 ~TPTWaVA~Vc~v~v~iSl~~Er~lH~-------lgk~lkk~~k 49 (500)
+|+-|..++++.+++++.+++++++.. +..|..++|+
T Consensus 38 e~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~rr~ 81 (398)
T PRK10747 38 ETSVTGLAIILILAMVVLFAIEWLLRRIFRTGARTRGWFVGRKR 81 (398)
T ss_pred EehHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHH
Confidence 577888888888888888888998854 4567777555
No 12
>COG3114 CcmD Heme exporter protein D [Intracellular trafficking and secretion]
Probab=22.84 E-value=1.2e+02 Score=25.48 Aligned_cols=40 Identities=28% Similarity=0.617 Sum_probs=23.7
Q ss_pred HhccccchhhhhHhh----HHHHHHHHHhh-----hHHHHHHHHHhhhC
Q 010805 287 LLNIEGWHTYFWLAF----LPLVLLLLVGA-----KLEHIITRLAQDVD 326 (500)
Q Consensus 287 Llnv~Gw~~yfWlsf----iPliliL~VGt-----KLq~II~~la~ei~ 326 (500)
++|..|...|-|+++ +|++++.+.-- -|+.+..+.+.|..
T Consensus 9 FfaMGgyafyVWlA~~~tll~l~~l~v~sv~qrr~iL~~v~r~~aReaR 57 (67)
T COG3114 9 FFAMGGYAFYVWLAVGMTLLPLAVLVVHSVLQRRAILRGVARQRAREAR 57 (67)
T ss_pred HHHccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888865 66555444332 25555666666543
No 13
>PF15468 DUF4636: Domain of unknown function (DUF4636)
Probab=21.18 E-value=52 Score=33.38 Aligned_cols=38 Identities=24% Similarity=0.592 Sum_probs=27.4
Q ss_pred HHHHHHHhhhcccceeeechhhHHHHHHHHHhccccchhhhhH
Q 010805 257 HKYMMRTLEWDFRKVVGIRWYLWLFLVLFLLLNIEGWHTYFWL 299 (500)
Q Consensus 257 ~kYi~RsLE~DFk~VVGIS~~lW~~vvlflLlnv~Gw~~yfWl 299 (500)
+.|=-| +||+-.++| +..||-|+++++|.= -.+.++|+
T Consensus 25 qdyEc~--KDdsc~~iG-~fLlWyfviilvLm~--~~ras~Wm 62 (243)
T PF15468_consen 25 QDYECR--KDDSCGAIG-SFLLWYFVIILVLMF--FSRASVWM 62 (243)
T ss_pred cchhhc--cCCccchhh-hHHHHHHHHHHHHHH--HHHHHHHH
Confidence 455444 899888888 889999998877652 24677774
No 14
>PF14015 DUF4231: Protein of unknown function (DUF4231)
Probab=20.86 E-value=2.7e+02 Score=23.75 Aligned_cols=41 Identities=17% Similarity=0.113 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcCchHHHHHHHHHHHHHHH
Q 010805 19 VAVVCFVIVLISFCAERGLHGLGKFLKKNKQDALFEALQKLKEELML 65 (500)
Q Consensus 19 VA~Vc~v~v~iSl~~Er~lH~lgk~lkk~~kkaL~eALeKiK~ELML 65 (500)
+++++.+++++.-.+...-..=.+|.+. ..+.|.+|.|.+.
T Consensus 54 ~~~~l~~~~~~~~~~~~~~~~~~~W~~~------r~tae~lk~e~~~ 94 (112)
T PF14015_consen 54 VAAILSALAAILASLAAFFRFHERWIRY------RATAESLKREKWL 94 (112)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHH------HHHHHHHHHHHHH
Confidence 4446677777777778887777788763 3455666666553
Done!