BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010806
(500 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 258/467 (55%), Gaps = 24/467 (5%)
Query: 18 LPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWRE 77
+ + T D Y FG LC K T A K I KR++ + D + + RE
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 78 IQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
+Q++ L +HPN++++ +ED + +LV E+ GGELFD I+++ +SE +AA++I+ +
Sbjct: 101 VQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 159
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYV 197
+S + H ++HRDLKPEN L ++ DA + DFGLS ++ + + D +G+ YY+
Sbjct: 160 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 219
Query: 198 APEVLLKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
APEVL Y + DVWS GVILYILLSG PPF E I K++ +GK FE W +S
Sbjct: 220 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 279
Query: 258 DSAKDLIRKMLERDPRRRISAHEVLCHPWI---VDDTVAPDKP-LDSAVLSRLKHFCAMN 313
+SAKDLIRKML P RISA + L H WI + ++ D P LD+A+L+ ++ F
Sbjct: 280 ESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQ 338
Query: 314 KLKKMALRVIAERL-SEEEIGGLKELFKMIDTDESGTITFEELKVGLKR----------- 361
KL + AL + +L S++E L +F +D + G + EL G K
Sbjct: 339 KLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 398
Query: 362 VGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGY 421
+ + +E E+ ++DA D D NG IEY EF+ + + E L AF FD D SG
Sbjct: 399 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGK 458
Query: 422 ITIDELQQACKEFGLGEVPLD---EIVKEIDQDNDGRIDYGEFATMM 465
I+ EL FG+ +V + ++ E+D++NDG +D+ EF M+
Sbjct: 459 ISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 301 bits (771), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 258/467 (55%), Gaps = 24/467 (5%)
Query: 18 LPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWRE 77
+ + T D Y FG LC K T A K I KR++ + D + + RE
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 78 IQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
+Q++ L +HPN++++ +ED + +LV E+ GGELFD I+++ +SE +AA++I+ +
Sbjct: 100 VQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYV 197
+S + H ++HRDLKPEN L ++ DA + DFGLS ++ + + D +G+ YY+
Sbjct: 159 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 218
Query: 198 APEVLLKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
APEVL Y + DVWS GVILYILLSG PPF E I K++ +GK FE W +S
Sbjct: 219 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 278
Query: 258 DSAKDLIRKMLERDPRRRISAHEVLCHPWI---VDDTVAPDKP-LDSAVLSRLKHFCAMN 313
+SAKDLIRKML P RISA + L H WI + ++ D P LD+A+L+ ++ F
Sbjct: 279 ESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQ 337
Query: 314 KLKKMALRVIAERL-SEEEIGGLKELFKMIDTDESGTITFEELKVGLKR----------- 361
KL + AL + +L S++E L +F +D + G + EL G K
Sbjct: 338 KLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 397
Query: 362 VGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGY 421
+ + +E E+ ++DA D D NG IEY EF+ + + E L AF FD D SG
Sbjct: 398 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGK 457
Query: 422 ITIDELQQACKEFGLGEVPLD---EIVKEIDQDNDGRIDYGEFATMM 465
I+ EL FG+ +V + ++ E+D++NDG +D+ EF M+
Sbjct: 458 ISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 301 bits (771), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 258/467 (55%), Gaps = 24/467 (5%)
Query: 18 LPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWRE 77
+ + T D Y FG LC K T A K I KR++ + D + + RE
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 78 IQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
+Q++ L +HPN++++ +ED + +LV E+ GGELFD I+++ +SE +AA++I+ +
Sbjct: 77 VQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYV 197
+S + H ++HRDLKPEN L ++ DA + DFGLS ++ + + D +G+ YY+
Sbjct: 136 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 195
Query: 198 APEVLLKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
APEVL Y + DVWS GVILYILLSG PPF E I K++ +GK FE W +S
Sbjct: 196 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 255
Query: 258 DSAKDLIRKMLERDPRRRISAHEVLCHPWI---VDDTVAPDKP-LDSAVLSRLKHFCAMN 313
+SAKDLIRKML P RISA + L H WI + ++ D P LD+A+L+ ++ F
Sbjct: 256 ESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQ 314
Query: 314 KLKKMALRVIAERL-SEEEIGGLKELFKMIDTDESGTITFEELKVGLKR----------- 361
KL + AL + +L S++E L +F +D + G + EL G K
Sbjct: 315 KLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 374
Query: 362 VGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGY 421
+ + +E E+ ++DA D D NG IEY EF+ + + E L AF FD D SG
Sbjct: 375 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGK 434
Query: 422 ITIDELQQACKEFGLGEVPLD---EIVKEIDQDNDGRIDYGEFATMM 465
I+ EL FG+ +V + ++ E+D++NDG +D+ EF M+
Sbjct: 435 ISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 252/450 (56%), Gaps = 27/450 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG C + T +A K I K + D + RE++++ L +HPN++++ ED
Sbjct: 35 FGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKL-DHPNIMKLFEILED 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
S ++V EL GGELFD I+ + +SE +AA++IK + S + H ++HRDLKPEN
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGPEIDVWSAGVIL 219
L ++ D + DFGLS ++ + D +G+ YY+APEVL Y + DVWSAGVIL
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVIL 212
Query: 220 YILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAH 279
YILLSG PPF+ + E I K++ GK F+ W +ISD AKDLIRKML P RI+A
Sbjct: 213 YILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 280 EVLCHPWI----VDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIAERLSE-EEIGG 334
+ L HPWI + D P + ++ ++ F A KL + AL +A +L+ +E
Sbjct: 273 QCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQ 332
Query: 335 LKELFKMIDTDESGTITFEELKVG------LKRVGSQ--------LMESEIKALMDAADI 380
L E+F+ +DT+ G + +EL G LK V S +E +I +LM D+
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDM 392
Query: 381 DNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDEL----QQACKEFGL 436
D +G+IEY EFIA+ + + E + AF FD+DGSG I+ EL QA +
Sbjct: 393 DGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQM 452
Query: 437 GEVPLDEIVKEIDQDNDGRIDYGEFATMMR 466
E L+ I++++D + DG +D+ EF M++
Sbjct: 453 EE--LESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 254/464 (54%), Gaps = 27/464 (5%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
L D Y +G LC K T A A K I K + + + E+ ++ L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN++++ +ED +LVME+ GGELFD I+ + +SE +AA ++K ++S
Sbjct: 62 -DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK 204
H ++HRDLKPEN L ++ DA + DFGLS ++ G + + +G+ YY+APEVL K
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
Y + DVWS GVILYILL G PPF +T+ I K++ +GK F+ W +SD AK L+
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 265 RKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLD------SAVLSRLKHFCAMNKLKKM 318
+ ML +P +RISA E L HPWIV K D + L +K F + KL +
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWIV--KFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQA 298
Query: 319 ALRVIAERLSE-EEIGGLKELFKMIDTDESGTITFEELKVGLKR-----------VGSQL 366
A+ + +L+ EE L ++F+ +D + G + +EL G ++ + S
Sbjct: 299 AMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQ 358
Query: 367 MESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDE 426
+E+E+ ++ + D D NG IEY EF+ + + E L+AAF FD DGSG IT +E
Sbjct: 359 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEE 418
Query: 427 LQQACKEFGLGEV---PLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
L + FG+ EV ++++E D++NDG +D+ EF MM++
Sbjct: 419 LGRL---FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 291 bits (744), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 251/467 (53%), Gaps = 24/467 (5%)
Query: 18 LPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWRE 77
+ + T D Y FG LC K T A K I KR++ + D + + RE
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 78 IQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
+Q++ L +HPN+ ++ +ED + +LV E+ GGELFD I+++ +SE +AA++I+ +
Sbjct: 77 VQLLKQL-DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYV 197
+S + H ++HRDLKPEN L ++ DA + DFGLS ++ + D +G+ YY+
Sbjct: 136 LSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYI 195
Query: 198 APEVLLKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
APEVL Y + DVWS GVILYILLSG PPF E I K++ +GK FE W +S
Sbjct: 196 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 255
Query: 258 DSAKDLIRKMLERDPRRRISAHEVLCHPWI---VDDTVAPDKP-LDSAVLSRLKHFCAMN 313
+SAKDLIRK L P RISA + L H WI + ++ D P LD+A+L+ ++ F
Sbjct: 256 ESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQ 314
Query: 314 KLKKMALRVIAERL-SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVG--------- 363
KL + AL +L S++E L +F D + G + EL G K +
Sbjct: 315 KLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASX 374
Query: 364 --SQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGY 421
+ +E E+ ++DA D D NG IEY EF+ + E L AF FD D SG
Sbjct: 375 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGK 434
Query: 422 ITIDELQQACKEFGLGEVPLD---EIVKEIDQDNDGRIDYGEFATMM 465
I+ EL FG+ +V + ++ E+D++NDG +D+ EF +
Sbjct: 435 ISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 24/121 (19%)
Query: 398 LNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEF-------------GLGEVPLDEI 444
L + + L A F D++G G + EL + KE E +D++
Sbjct: 328 LTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQV 387
Query: 445 VKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSLNFN-----------IADAFGVK 493
+ +D D +G I+Y EF T+ + + + R R F+ +A FGV
Sbjct: 388 LDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVS 447
Query: 494 D 494
D
Sbjct: 448 D 448
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 260/459 (56%), Gaps = 21/459 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
L + Y +G LC K T+ A K I K + + + E+ ++ L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLK-L 92
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN++++ +ED +LVME GGELFD I+ + ++E +AA +IK ++S V
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK 204
H ++HRDLKPEN L ++ DA + DFGLS ++ + + + +G+ YY+APEVL K
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK 212
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
Y + DVWS GVIL+ILL+G PPF +T+ I +++ +GK F+S W ++S+ AKDLI
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272
Query: 265 RKMLERDPRRRISAHEVLCHPWIVDDTVAPDK----PLDSAVLSRLKHFCAMNKLKKMAL 320
++ML+ D +RRISA + L HPWI + + P + + ++ F KL + AL
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAAL 332
Query: 321 RVIAERL-SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQ--------LMESEI 371
+A +L S+EE L ++F+ ID + G + +EL G ++ + +ESE+
Sbjct: 333 LYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEV 392
Query: 372 KALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQAC 431
A++ AAD D NG I+Y EF+ + + ++ L +AF FD+DG+G I++DEL
Sbjct: 393 DAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV- 451
Query: 432 KEFGLGEV---PLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
FGL + E++ ID +NDG +D+ EF M+++
Sbjct: 452 --FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 242/450 (53%), Gaps = 23/450 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKL----------LCREDYDDVWREIQIMHHLSEHPN 89
+G LC K ++ A K I K + + +++++ EI ++ L +HPN
Sbjct: 49 YGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPN 107
Query: 90 VVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV 149
++++ +ED + +LV E GGELF++I+ + + E +AA ++K I+S + H +
Sbjct: 108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNI 167
Query: 150 MHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGPE 209
+HRD+KPEN L + + DFGLS F+ L D +G+ YY+APEVL K Y +
Sbjct: 168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEK 227
Query: 210 IDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
DVWS GVI+YILL G PPF + + I K++ +GK F+ + W +ISD AK+LI+ ML
Sbjct: 228 CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLT 287
Query: 270 RDPRRRISAHEVLCHPWI---VDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIAER 326
D +R +A E L WI ++ D+ LS ++ F KL + A+ I +
Sbjct: 288 YDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSK 347
Query: 327 LSE-EEIGGLKELFKMIDTDESGTITFEELKVG---LKRVGSQL-----MESEIKALMDA 377
L+ EE L ++FK +D + G + +EL G L+ ++L +E E+ ++
Sbjct: 348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKE 407
Query: 378 ADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFGLG 437
D D NG IEY EFI+ + + EE L AF+ FD D SG IT +EL +
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSIS 467
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
E ++++ E DQ+ D ID+ EF +MM +
Sbjct: 468 EKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 156/176 (88%), Gaps = 5/176 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
AERLSEEEIGGLKELFKMIDTD SGTITF+ELK GLKRVGS+LMESEIK LMDAADID +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 384 GTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFGLGEVPLDE 443
GTI+YGEFIAAT+HLNK+EREENL++AFS+FD+DGSGYIT+DE+QQACK+FGL ++ +D+
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 444 IVKEIDQDNDGRIDYGEFATMM--RQSEGGVGKSRTMRNSLNFNIADAFGVKDPST 497
++KEIDQDNDG+IDYGEFA MM R+ GG+G+ RTMR +L N+ DA G+ D +
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGR-RTMRKTL--NLRDALGLVDNGS 173
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 182/298 (61%), Gaps = 5/298 (1%)
Query: 21 QTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQI 80
Q +RD Y F L K T A K I K+ L +E + EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAV 69
Query: 81 MHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
+H + +HPN+V + YE ++L+M+L +GGELFDRIV KG Y+ER+A++LI ++
Sbjct: 70 LHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
V+ H LG++HRDLKPEN L+ + +D+K+M +DFGLS PG LS G+P YVAPE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDS 259
VL K Y +D WS GVI YILL G PPF+ E ++ +F+QIL+ + +F+S W ISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKK 317
AKD IR ++E+DP +R + + L HPWI DT A DK + +V ++K A +K K+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 181/298 (60%), Gaps = 5/298 (1%)
Query: 21 QTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQI 80
Q +RD Y F L K T A K I K L +E + EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAV 69
Query: 81 MHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
+H + +HPN+V + YE ++L+M+L +GGELFDRIV KG Y+ER+A++LI ++
Sbjct: 70 LHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
V+ H LG++HRDLKPEN L+ + +D+K+M +DFGLS PG LS G+P YVAPE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDS 259
VL K Y +D WS GVI YILL G PPF+ E ++ +F+QIL+ + +F+S W ISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKK 317
AKD IR ++E+DP +R + + L HPWI DT A DK + +V ++K A +K K+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 181/298 (60%), Gaps = 5/298 (1%)
Query: 21 QTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQI 80
Q +RD Y F L K T A K I K L +E + EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAV 69
Query: 81 MHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
+H + +HPN+V + YE ++L+M+L +GGELFDRIV KG Y+ER+A++LI ++
Sbjct: 70 LHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
V+ H LG++HRDLKPEN L+ + +D+K+M +DFGLS PG LS G+P YVAPE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDS 259
VL K Y +D WS GVI YILL G PPF+ E ++ +F+QIL+ + +F+S W ISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKK 317
AKD IR ++E+DP +R + + L HPWI DT A DK + +V ++K A +K K+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 173/283 (61%), Gaps = 5/283 (1%)
Query: 21 QTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQI 80
Q +RD Y F L K T A K I K L +E + EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAV 69
Query: 81 MHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
+H + +HPN+V + YE ++L+M+L +GGELFDRIV KG Y+ER+A++LI ++
Sbjct: 70 LHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
V+ H LG++HRDLKPEN L+ + +D+K+M +DFGLS PG LS G+P YVAPE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDS 259
VL K Y +D WS GVI YILL G PPF+ E ++ +F+QIL+ + +F+S W ISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAV 302
AKD IR ++E+DP +R + + L HPWI DT A DK + +V
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSV 290
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/263 (42%), Positives = 165/263 (62%), Gaps = 4/263 (1%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
+ +Y +G + + K T A K IPK + ED D +EI+IM L
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSL 80
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN++++ T+ED+ ++LVMELC GGELF+R+V K + E +AA+++K ++S V C
Sbjct: 81 -DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 139
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK 204
H L V HRDLKPENFLF TD D+ L DFGL+ +KPG+ + VG+PYYV+P+VL
Sbjct: 140 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG 199
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
YGPE D WSAGV++Y+LL G PPF A T+ + +I +G F W ++S A+ LI
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI 259
Query: 265 RKMLERDPRRRISAHEVLCHPWI 287
R++L + P++RI++ + L H W
Sbjct: 260 RRLLTKSPKQRITSLQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/263 (42%), Positives = 165/263 (62%), Gaps = 4/263 (1%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
+ +Y +G + + K T A K IPK + ED D +EI+IM L
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSL 63
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN++++ T+ED+ ++LVMELC GGELF+R+V K + E +AA+++K ++S V C
Sbjct: 64 -DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 122
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK 204
H L V HRDLKPENFLF TD D+ L DFGL+ +KPG+ + VG+PYYV+P+VL
Sbjct: 123 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG 182
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
YGPE D WSAGV++Y+LL G PPF A T+ + +I +G F W ++S A+ LI
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI 242
Query: 265 RKMLERDPRRRISAHEVLCHPWI 287
R++L + P++RI++ + L H W
Sbjct: 243 RRLLTKSPKQRITSLQALEHEWF 265
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 176/279 (63%), Gaps = 5/279 (1%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L K T FA K IPK+ L +E + EI ++ + +H N+V ++ YE
Sbjct: 35 FSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIAVLRKI-KHENIVALEDIYES 91
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVM+L +GGELFDRIV KG Y+E++A+ LI+ ++ V H +G++HRDLKPEN
Sbjct: 92 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L+ + +++K+M +DFGLS G +S G+P YVAPEVL K Y +D WS GVI
Sbjct: 152 LYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
YILL G PPF+ E +S +F+QIL+ + +F+S W ISDSAKD IR ++E+DP +R +
Sbjct: 212 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTC 271
Query: 279 HEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKK 317
+ HPWI DT A +K + +V ++++ A +K ++
Sbjct: 272 EQAARHPWIAGDT-ALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 131/161 (81%)
Query: 307 KHFCAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQL 366
K F A NK KK ALRVIAE LSEEEI GLKE F ID D+SG ITFEELK GLKRVG+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 367 MESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDE 426
ESEI L AAD+DN+GTI+Y EFIAATLHLNK+ERE++L AAF++FD+DGSGYIT DE
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 427 LQQACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
LQQAC+EFG+ +V ++E+ +++DQDNDGRIDY EF ++
Sbjct: 121 LQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVAXXQK 161
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 161/270 (59%), Gaps = 1/270 (0%)
Query: 18 LPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWRE 77
+ + T D Y FG LC K T A K I KR++ + D + + RE
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 78 IQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
+Q++ L +HPN++++ +ED + +LV E+ GGELFD I+++ +SE +AA++I+ +
Sbjct: 83 VQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 141
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYV 197
+S + H ++HRDLKPEN L ++ DA + DFGLS ++ + + D +G+ YY+
Sbjct: 142 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 201
Query: 198 APEVLLKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
APEVL Y + DVWS GVILYILLSG PPF E I K++ +GK FE W +S
Sbjct: 202 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 261
Query: 258 DSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+SAKDLIRKML P RISA + L H WI
Sbjct: 262 ESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 169/290 (58%), Gaps = 6/290 (2%)
Query: 21 QTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQI 80
QT +R + F +L + T FA K I K ++ EI +
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAV 59
Query: 81 MHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
+ + +H N+V ++ YE + +LVM+L +GGELFDRI+ +G Y+E++A+ +I+ ++S
Sbjct: 60 LKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA 118
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
V+ H G++HRDLKPEN L+ T +++K+M TDFGLS + G +S G+P YVAPE
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPE 177
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDS 259
VL K Y +D WS GVI YILL G PPF+ ETES +F++I +G +FES W IS+S
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES 237
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHF 309
AKD I +LE+DP R + + L HPWI +T S L K+F
Sbjct: 238 AKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNF 287
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 154/264 (58%), Gaps = 1/264 (0%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
L D Y +G LC K T A A K I K + + + E+ ++ L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN++++ +ED +LVME+ GGELFD I+ + +SE +AA ++K ++S
Sbjct: 79 -DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK 204
H ++HRDLKPEN L ++ DA + DFGLS ++ G + + +G+ YY+APEVL K
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
Y + DVWS GVILYILL G PPF +T+ I K++ +GK F+ W +SD AK L+
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257
Query: 265 RKMLERDPRRRISAHEVLCHPWIV 288
+ ML +P +RISA E L HPWIV
Sbjct: 258 KLMLTYEPSKRISAEEALNHPWIV 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 2/248 (0%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG C + T +A K I K +D + RE++++ L +HPN++++ ED
Sbjct: 35 FGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILED 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
S ++V EL GGELFD I+ + +SE +AA++IK + S + H ++HRDLKPEN
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGPEIDVWSAGVIL 219
L ++ D + DFGLS ++ + D +G+ YY+APEVL Y + DVWSAGVIL
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVIL 212
Query: 220 YILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAH 279
YILLSG PPF+ + E I K++ GK F+ W +ISD AKDLIRKML P RI+A
Sbjct: 213 YILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 280 EVLCHPWI 287
+ L HPWI
Sbjct: 273 QCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 2/248 (0%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG C + T +A K I K +D + RE++++ L +HPN++++ ED
Sbjct: 35 FGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILED 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
S ++V EL GGELFD I+ + +SE +AA++IK + S + H ++HRDLKPEN
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGPEIDVWSAGVIL 219
L ++ D + DFGLS ++ + D +G+ YY+APEVL Y + DVWSAGVIL
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVIL 212
Query: 220 YILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAH 279
YILLSG PPF+ + E I K++ GK F+ W +ISD AKDLIRKML P RI+A
Sbjct: 213 YILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 280 EVLCHPWI 287
+ L HPWI
Sbjct: 273 QCLEHPWI 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 173/325 (53%), Gaps = 9/325 (2%)
Query: 4 QSSGSGSTKPANTVLPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKR 63
Q G GS N + + D+Y F C+HKTT FA K I +
Sbjct: 11 QQMGRGSEFMMNA-----STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK 65
Query: 64 KLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKG 123
KL R D+ + RE +I L +HPN+V++ + ++ F +LV +L GGELF+ IVA+
Sbjct: 66 KLSAR-DFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE 123
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
YSE +A+ I+ I+ + CHS G++HR+LKPEN L + A + DFGL++
Sbjct: 124 FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
+ G+P Y++PEVL K Y +D+W+ GVILYILL G PPFW E + ++ QI
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 243
Query: 243 QGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAV 302
G D+ S W +++ AK LI ML +P++RI+A + L PWI +
Sbjct: 244 AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDT 303
Query: 303 LSRLKHFCAMNKLKKMAL-RVIAER 326
+ LK F A KLK L +IA R
Sbjct: 304 VDCLKKFNARRKLKGAILTTMIATR 328
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 172/327 (52%), Gaps = 7/327 (2%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
+ D Y F C+ T +A K I +KL R D+ + RE +I L
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICR-L 59
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN+V++ + + F +LV +L GGELF+ IVA+ +YSE +A+ I+ I+ V C
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL 203
H G++HRDLKPEN L + A + DFGL++ + Q G+P Y++PEVL
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
K YG +D+W+ GVILYILL G PPFW E + +++QI G DF S W +++ AKD
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 263 LIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRV 322
LI KML +P +RI+A E L HPWI + + LK F A KLK L
Sbjct: 240 LINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTT 299
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGT 349
+ L+ K L K D + T
Sbjct: 300 M---LATRNFSAAKSLLKKPDGVKEST 323
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 163/294 (55%), Gaps = 4/294 (1%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
+ D Y F C+ T +A K I +KL R D+ + RE +I L
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR-DHQKLEREARICR-L 59
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+H N+V++ + + F +LV +L GGELF+ IVA+ +YSE +A+ I+ I+ V C
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL 203
H +GV+HRDLKPEN L + A + DFGL++ + Q G+P Y++PEVL
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
K YG +D+W+ GVILYILL G PPFW E + +++QI G DF S W +++ AK+
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 239
Query: 263 LIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLK 316
LI +ML +P +RI+AHE L HPW+ + + LK F A KLK
Sbjct: 240 LINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 165/284 (58%), Gaps = 10/284 (3%)
Query: 43 TYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVF 102
Y C K T +A K + K D V EI ++ LS HPN++++K +E
Sbjct: 69 VYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTE 122
Query: 103 VHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFD 162
+ LV+EL GGELFDRIV KG+YSER+AA +K I+ V H G++HRDLKPEN L+
Sbjct: 123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYA 182
Query: 163 TDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYI 221
T DA L DFGLS + + V G+P Y APE+L YGPE+D+WS G+I YI
Sbjct: 183 TPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYI 242
Query: 222 LLSGVPPFWAET-ESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHE 280
LL G PF+ E + +F++IL + F S W +S +AKDL+RK++ DP++R++ +
Sbjct: 243 LLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQ 302
Query: 281 VLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIA 324
L HPW V A +D+A +L+ F A KLK V+A
Sbjct: 303 ALQHPW-VTGKAANFVHMDTA-QKKLQEFNARRKLKAAVKAVVA 344
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 164/301 (54%), Gaps = 4/301 (1%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL 84
+ D Y F C+ T +A K I +KL R D+ + RE +I L
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICR-L 59
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC 144
+HPN+V++ + + F +LV +L GGELF+ IVA+ +YSE +A+ I+ I+ V C
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL 203
H G++HRDLKPEN L + A + DFGL++ + Q G+P Y++PEVL
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
K YG +D+W+ GVILYILL G PPFW E + +++QI G DF S W +++ AKD
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 263 LIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRV 322
LI KML +P +RI+A E L HPWI + + LK F A KLK L
Sbjct: 240 LINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTT 299
Query: 323 I 323
+
Sbjct: 300 M 300
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 155/269 (57%), Gaps = 3/269 (1%)
Query: 22 TPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIM 81
+ + D+Y F C+HKTT FA K I +KL R D+ + RE +I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARIC 59
Query: 82 HHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVV 141
L +HPN+V++ + ++ F +LV +L GGELF+ IVA+ YSE +A+ I+ I+ +
Sbjct: 60 RKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 142 EGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEV 201
CHS G++HR+LKPEN L + A + DFGL++ + G+P Y++PEV
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 202 LLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
L K Y +D+W+ GVILYILL G PPFW E + ++ QI G D+ S W +++ A
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 261 KDLIRKMLERDPRRRISAHEVLCHPWIVD 289
K LI ML +P++RI+A + L PWI +
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWICN 267
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 155/269 (57%), Gaps = 3/269 (1%)
Query: 22 TPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIM 81
+ + D+Y F C+HKTT FA K I +KL R D+ + RE +I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARIC 59
Query: 82 HHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVV 141
L +HPN+V++ + ++ F +LV +L GGELF+ IVA+ YSE +A+ I+ I+ +
Sbjct: 60 RKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 142 EGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEV 201
CHS G++HR+LKPEN L + A + DFGL++ + G+P Y++PEV
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 202 LLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
L K Y +D+W+ GVILYILL G PPFW E + ++ QI G D+ S W +++ A
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 261 KDLIRKMLERDPRRRISAHEVLCHPWIVD 289
K LI ML +P++RI+A + L PWI +
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWICN 267
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 154/267 (57%), Gaps = 3/267 (1%)
Query: 24 RLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHH 83
+ D+Y F C+HKTT FA K I +KL R D+ + RE +I
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRK 60
Query: 84 LSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEG 143
L +HPN+V++ + ++ F +LV +L GGELF+ IVA+ YSE +A+ I+ I+ +
Sbjct: 61 L-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 144 CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL 203
CHS G++HR+LKPEN L + A + DFGL++ + G+P Y++PEVL
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
K Y +D+W+ GVILYILL G PPFW E + ++ QI G D+ S W +++ AK
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 239
Query: 263 LIRKMLERDPRRRISAHEVLCHPWIVD 289
LI ML +P++RI+A + L PWI +
Sbjct: 240 LIDSMLTVNPKKRITADQALKVPWICN 266
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 158/279 (56%), Gaps = 4/279 (1%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F C+ +A K I +KL R D+ + RE +I L +HPN+V++ + +
Sbjct: 35 FSVVRRCVKVLAGQEYAAKIINTKKLSAR-DHQKLEREARICR-LLKHPNIVRLHDSISE 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+L+ +L GGELF+ IVA+ +YSE +A+ I+ I+ V CH +GV+HRDLKPEN
Sbjct: 93 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 152
Query: 160 LFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
L + A + DFGL++ + Q G+P Y++PEVL K YG +D+W+ GV
Sbjct: 153 LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV 212
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILYILL G PPFW E + +++QI G DF S W +++ AKDLI KML +P +RI+
Sbjct: 213 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT 272
Query: 278 AHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLK 316
A E L HPWI + + LK F A KLK
Sbjct: 273 AAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 163/302 (53%), Gaps = 4/302 (1%)
Query: 24 RLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHH 83
R + Y F C+ +A I +KL R D+ + RE +I
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREARICR- 65
Query: 84 LSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEG 143
L +HPN+V++ + + +L+ +L GGELF+ IVA+ +YSE +A+ I+ I+ V
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 144 CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEVL 202
CH +GV+HR+LKPEN L + A + DFGL++ + Q G+P Y++PEVL
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 203 LKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK 261
K YG +D+W+ GVILYILL G PPFW E + +++QI G DF S W +++ AK
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALR 321
DLI KML +P +RI+A E L HPWI + + LK F A KLK L
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILT 305
Query: 322 VI 323
V+
Sbjct: 306 VM 307
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 162/302 (53%), Gaps = 4/302 (1%)
Query: 24 RLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHH 83
R D Y F C+ KT +A K I +KL R D+ + RE +I
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR-DHQKLEREARICR- 85
Query: 84 LSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEG 143
L +HPN+V++ + + F +LV +L GGELF+ IVA+ +YSE +A+ I I+ V
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNH 145
Query: 144 CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEVL 202
H ++HRDLKPEN L + A + DFGL++ + Q G+P Y++PEVL
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVL 205
Query: 203 LKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK 261
K YG +D+W+ GVILYILL G PPFW E + +++QI G DF S W +++ AK
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 265
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALR 321
+LI +ML +P +RI+A + L HPW+ + + L+ F A KLK L
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILT 325
Query: 322 VI 323
+
Sbjct: 326 TM 327
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 143/255 (56%), Gaps = 16/255 (6%)
Query: 46 CIHKTTNAHFACKSI------PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
CIHK T +A K I +E + +E+ I+ +S HPN++Q+K TYE
Sbjct: 23 CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ F LV +L GELFD + K SE+E K+++ ++ V+ H L ++HRDLKPEN
Sbjct: 83 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-------LKHYGPEIDV 212
L D DD + TDFG S PG+ L +V G+P Y+APE++ YG E+D+
Sbjct: 143 LLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
WS GVI+Y LL+G PPFW + + + I+ G F S W SD+ KDL+ + L P
Sbjct: 200 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP 259
Query: 273 RRRISAHEVLCHPWI 287
++R +A E L HP+
Sbjct: 260 QKRYTAEEALAHPFF 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 143/255 (56%), Gaps = 16/255 (6%)
Query: 46 CIHKTTNAHFACKSI------PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
CIHK T +A K I +E + +E+ I+ +S HPN++Q+K TYE
Sbjct: 36 CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ F LV +L GELFD + K SE+E K+++ ++ V+ H L ++HRDLKPEN
Sbjct: 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-------LKHYGPEIDV 212
L D DD + TDFG S PG+ L +V G+P Y+APE++ YG E+D+
Sbjct: 156 LLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
WS GVI+Y LL+G PPFW + + + I+ G F S W SD+ KDL+ + L P
Sbjct: 213 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP 272
Query: 273 RRRISAHEVLCHPWI 287
++R +A E L HP+
Sbjct: 273 QKRYTAEEALAHPFF 287
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 142/255 (55%), Gaps = 16/255 (6%)
Query: 46 CIHKTTNAHFACKSI------PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
CIHK T +A K I +E + +E+ I+ +S HPN++Q+K TYE
Sbjct: 36 CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ F LV +L GELFD + K SE+E K+++ ++ V+ H L ++HRDLKPEN
Sbjct: 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-------LKHYGPEIDV 212
L D DD + TDFG S PG+ L V G+P Y+APE++ YG E+D+
Sbjct: 156 LLD---DDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
WS GVI+Y LL+G PPFW + + + I+ G F S W SD+ KDL+ + L P
Sbjct: 213 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP 272
Query: 273 RRRISAHEVLCHPWI 287
++R +A E L HP+
Sbjct: 273 QKRYTAEEALAHPFF 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 146/252 (57%), Gaps = 19/252 (7%)
Query: 46 CIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL 105
CIHK TN FA K I K K D EI+I+ +HPN++ +K Y+D +V++
Sbjct: 41 CIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLF-DTD 164
V EL GGEL D+I+ + +SEREA+ ++ TI VE H+ GV+HRDLKP N L+ D
Sbjct: 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 165 GDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY----VAPEVLLKH-YGPEIDVWSAGVIL 219
G+ + DFG F K + + ++ +P Y VAPEVL + Y D+WS GV+L
Sbjct: 154 GNPESIRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
Query: 220 YILLSGVPPFWA---ETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
Y +L+G PF +T I +I GK W S+SD+AKDL+ KML DP +R+
Sbjct: 211 YTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL 270
Query: 277 SAHEVLCHPWIV 288
+A VL HPWIV
Sbjct: 271 TAALVLRHPWIV 282
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 158/299 (52%), Gaps = 19/299 (6%)
Query: 18 LPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWRE 77
L +Q+ D Y + C+HK TN +A K I K K D E
Sbjct: 18 LYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEE 70
Query: 78 IQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
I+I+ +HPN++ +K Y+D V+LV EL GGEL D+I+ + +SEREA+ ++ TI
Sbjct: 71 IEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI 130
Query: 138 VSVVEGCHSLGVMHRDLKPENFLF-DTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
VE HS GV+HRDLKP N L+ D G+ L DFG F K + + ++ +P Y
Sbjct: 131 GKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCY 187
Query: 197 ----VAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFW---AETESGIFKQILQGKLDF 248
VAPEVL + Y D+WS G++LY +L+G PF ++T I +I GK
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 249 ESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLK 307
W ++S++AKDL+ KML DP +R++A +VL HPW+ P L L +K
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVK 306
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 164/301 (54%), Gaps = 30/301 (9%)
Query: 46 CIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL 105
C+HK TN +A K I K K D EI+I+ +HPN++ +K Y+D V+L
Sbjct: 46 CVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYL 98
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLF-DTD 164
V EL GGEL D+I+ + +SEREA+ ++ TI VE HS GV+HRDLKP N L+ D
Sbjct: 99 VTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDES 158
Query: 165 GDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY----VAPEVLLKH-YGPEIDVWSAGVIL 219
G+ L DFG F K + + ++ +P Y VAPEVL + Y D+WS G++L
Sbjct: 159 GNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 220 YILLSGVPPFW---AETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
Y +L+G PF ++T I +I GK W ++S++AKDL+ KML DP +R+
Sbjct: 216 YTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRL 275
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSAVLSRLK-----HFCAMN------KLKKMALRVIAE 325
+A +VL HPW+ P L L +K + A+N +LK + ++A+
Sbjct: 276 TAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKPIESSILAQ 335
Query: 326 R 326
R
Sbjct: 336 R 336
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 161/308 (52%), Gaps = 15/308 (4%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDS-AVLSRLKHFCAMN 313
+ S AKD IR++L +DP++R++ + L HPWI KP D+ LSR M
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSRKASAVNME 294
Query: 314 KLKKMALR 321
K KK A R
Sbjct: 295 KFKKFAAR 302
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 148/254 (58%), Gaps = 15/254 (5%)
Query: 46 CIHKTTNAHFACKSIP-KRKLLCREDYDDVW----REIQIMHHLSEHPNVVQIKGTYEDS 100
C+H+ T FA K + + L E ++V RE I+ ++ HP+++ + +YE S
Sbjct: 113 CVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
F+ LV +L GELFD + K SE+E ++++++ V H+ ++HRDLKPEN L
Sbjct: 173 SFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENIL 232
Query: 161 FDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-------KHYGPEIDVW 213
D D+ ++ +DFG S +PG+ L ++ G+P Y+APE+L YG E+D+W
Sbjct: 233 LD---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW 289
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
+ GVIL+ LL+G PPFW + + + I++G+ F S W S + KDLI ++L+ DP
Sbjct: 290 ACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPE 349
Query: 274 RRISAHEVLCHPWI 287
R++A + L HP+
Sbjct: 350 ARLTAEQALQHPFF 363
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 144/252 (57%), Gaps = 19/252 (7%)
Query: 46 CIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL 105
CIHK TN FA K I K K D EI+I+ +HPN++ +K Y+D +V++
Sbjct: 41 CIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLF-DTD 164
V EL GGEL D+I+ + +SEREA+ ++ TI VE H+ GV+HRDLKP N L+ D
Sbjct: 94 VTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 165 GDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY----VAPEVLLKH-YGPEIDVWSAGVIL 219
G+ + DFG F K + + ++ +P Y VAPEVL + Y D+WS GV+L
Sbjct: 154 GNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
Query: 220 YILLSGVPPFWA---ETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
Y L+G PF +T I +I GK W S+SD+AKDL+ K L DP +R+
Sbjct: 211 YTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRL 270
Query: 277 SAHEVLCHPWIV 288
+A VL HPWIV
Sbjct: 271 TAALVLRHPWIV 282
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 145/268 (54%), Gaps = 15/268 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F C+HK +N FA K I KR + +EI + HPN+V++ + D
Sbjct: 24 FSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHD 77
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ LVMEL GGELF+RI K H+SE EA+ +++ +VS V H +GV+HRDLKPEN
Sbjct: 78 QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENL 137
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP-GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
LF + D+ ++ DFG + P Q L + +Y APE+L ++ Y D+WS GV
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGV 197
Query: 218 ILYILLSGVPPFWAETES-------GIFKQILQGKLDFESDPWPSISDSAKDLIRKMLER 270
ILY +LSG PF + S I K+I +G FE + W ++S AKDLI+ +L
Sbjct: 198 ILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTV 257
Query: 271 DPRRRISAHEVLCHPWIVDDTVAPDKPL 298
DP +R+ + + W+ D + PL
Sbjct: 258 DPNKRLKMSGLRYNEWLQDGSQLSSNPL 285
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 63 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 63 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L++EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 145/273 (53%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
Y + DHY F C K T +A K I KR+L +++ R
Sbjct: 19 YFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIER 78
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + HPN++ + +E+ V L++EL +GGELFD + K +E EA + +K
Sbjct: 79 EVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 137
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I+ V HS + H DLKPEN L D + + ++ DFG++ + G ++ G+P
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 197
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF ET+ I DF+ + +
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 257
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S+ AKD IR++L +DP+RR+ + L H WI
Sbjct: 258 NTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 6/268 (2%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWREIQIM 81
+ DHY F C K T +A K I KR+L +++ RE+ I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 82 HHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVV 141
+ HPN++ + +E+ V L++EL +GGELFD + K +E EA + +K I+ V
Sbjct: 63 REI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 142 EGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
HS + H DLKPEN L D + + ++ DFG++ + G ++ G+P +VAPE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 201 VL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDS 259
++ + G E D+WS GVI YILLSG PF ET+ I DF+ + + + S+
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHPWI 287
AKD IR++L +DP+RR++ + L H WI
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + D+Y F C K+T +A K I KR+ +D+ R
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + +HPNV+ + YE+ V L+ EL AGGELFD + K +E EA + +K
Sbjct: 64 EVSILKEI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I++ V HSL + H DLKPEN L D + ++ DFGL+ G ++ G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF +T+ + +FE + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S AKD IR++L +DP++R++ + L HPWI
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 146/273 (53%), Gaps = 6/273 (2%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVWR 76
++ + DHY F C K T +A K I KR+L +++ R
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+ I+ + HPN++ + +E+ V L++EL +GGELFD + K +E EA + +K
Sbjct: 65 EVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 123
Query: 137 IVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
I+ V HS + H DLKPEN L D + + ++ DFG++ + G ++ G+P
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 183
Query: 196 YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
+VAPE++ + G E D+WS GVI YILLSG PF ET+ I DF+ + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 243
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S+ AKD IR++L +DP+RR+ + L H WI
Sbjct: 244 NTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 158/311 (50%), Gaps = 21/311 (6%)
Query: 20 YQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKL------LCREDYDD 73
++ ++ D Y F C K+T +A K I KR+ +CRE+ +
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE- 63
Query: 74 VWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKL 133
RE+ I+ + HPN++ + YE+ V L++EL +GGELFD + K SE EA
Sbjct: 64 --REVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVG 192
IK I+ V H+ + H DLKPEN L D + + DFGL+ + G ++ G
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 193 SPYYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESD 251
+P +VAPE++ + G E D+WS GVI YILLSG PF +T+ I DF+ +
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 240
Query: 252 PWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDS-AVLSRLKHFC 310
+ S+ AKD IRK+L ++ R+R++ E L HPWI P+D+ + R +
Sbjct: 241 FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT--------PVDTQQAMVRRESVV 292
Query: 311 AMNKLKKMALR 321
+ KK +R
Sbjct: 293 NLENFKKQYVR 303
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 157/293 (53%), Gaps = 10/293 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCRE--DYDDVWREIQIMHHLSEHPNVVQIKGTY 97
F CI++ T FA K + K +D+ RE I H L +HP++V++ TY
Sbjct: 37 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETY 95
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH----YSEREAAKLIKTIVSVVEGCHSLGVMHRD 153
+++V E G +L IV + YSE A+ ++ I+ + CH ++HRD
Sbjct: 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEID 211
+KPEN L + + A + DFG+++ + G VG+P+++APEV+ + YG +D
Sbjct: 156 VKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVD 215
Query: 212 VWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
VW GVIL+ILLSG PF+ T+ +F+ I++GK W IS+SAKDL+R+ML D
Sbjct: 216 VWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLD 274
Query: 272 PRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIA 324
P RI+ +E L HPW+ + K + +L+ F A KLK L ++
Sbjct: 275 PAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVS 327
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 76 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 127
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 187
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 247
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 248 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 307
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 308 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 30 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 81
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L++ +PYYVAPEVL + Y D+W
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 202 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 261
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 262 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 82 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 133
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 134 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 193
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 253
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 254 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 313
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 314 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 32 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 83
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 204 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 263
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 264 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 30 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 81
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 202 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 261
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 262 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 32 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 83
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 204 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 263
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 264 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 46 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 97
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 98 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 157
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 217
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 218 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 277
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 278 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 37 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 88
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 89 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 148
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 208
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 209 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 268
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 269 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 38 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 89
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 90 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 149
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 209
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 210 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 269
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 270 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 31 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 82
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 83 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 142
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 202
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 203 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 262
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 263 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 36 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 87
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 88 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 147
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D+W
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 207
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 208 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 267
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 268 TEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVW 75
P++ ++ D Y F C K+T +A K I KR+ +++
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
RE+ I+ + H NV+ + YE+ V L++EL +GGELFD + K SE EA IK
Sbjct: 64 REVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 136 TIVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSP 194
I+ V H+ + H DLKPEN L D + + DFGL+ + G ++ G+P
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 195 YYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+VAPE++ + G E D+WS GVI YILLSG PF +T+ I DF+ + +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF 242
Query: 254 PSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI--VDDTVA 293
S+ AKD IRK+L ++ R+R++ E L HPWI VD+ A
Sbjct: 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVW 75
P++ ++ D Y F C K+T +A K I KR+ +++
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
RE+ I+ + H NV+ + YE+ V L++EL +GGELFD + K SE EA IK
Sbjct: 64 REVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 136 TIVSVVEGCHSLGVMHRDLKPENF-LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSP 194
I+ V H+ + H DLKPEN L D + + DFGL+ + G ++ G+P
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 195 YYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+VAPE++ + G E D+WS GVI YILLSG PF +T+ I DF+ + +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242
Query: 254 PSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI--VDDTVA 293
S+ AKD IRK+L ++ R+R++ E L HPWI VD+ A
Sbjct: 243 SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVW 75
P++ ++ D Y F C K+T +A K I KR+ +++
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
RE+ I+ + H NV+ + YE+ V L++EL +GGELFD + K SE EA IK
Sbjct: 64 REVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 136 TIVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSP 194
I+ V H+ + H DLKPEN L D + + DFGL+ + G ++ G+P
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 195 YYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+VAPE++ + G E D+WS GVI YILLSG PF +T+ I DF+ + +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242
Query: 254 PSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI--VDDTVA 293
S+ AKD IRK+L ++ R+R++ E L HPWI VD+ A
Sbjct: 243 SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVW 75
P++ ++ D Y F C K+T +A K I KR+ +++
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
RE+ I+ + H NV+ + YE+ V L++EL +GGELFD + K SE EA IK
Sbjct: 64 REVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 136 TIVSVVEGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSP 194
I+ V H+ + H DLKPEN L D + + DFGL+ + G ++ G+P
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 195 YYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+VAPE++ + G E D+WS GVI YILLSG PF +T+ I DF+ + +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF 242
Query: 254 PSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI--VDDTVA 293
S+ AKD IRK+L ++ R+R++ E L HPWI VD+ A
Sbjct: 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCRE---DYDDVW 75
P++ ++ D Y F C K+T +A K I KR+ +++
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
RE+ I+ + H NV+ + YE+ V L++EL +GGELFD + K SE EA IK
Sbjct: 64 REVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 136 TIVSVVEGCHSLGVMHRDLKPENF-LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSP 194
I+ V H+ + H DLKPEN L D + + DFGL+ + G ++ G+P
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 195 YYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+VAPE++ + G E D+WS GVI YILLSG PF +T+ I DF+ + +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242
Query: 254 PSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI--VDDTVA 293
S+ AKD IRK+L ++ R+R++ E L HPWI VD+ A
Sbjct: 243 SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A K I KRK + +V EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A K I KRK + +V EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A K I KRK + +V EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A K I KRK + +V EI+
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 67 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A K I KRK + +V EI+
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 74 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 287
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 146/275 (53%), Gaps = 26/275 (9%)
Query: 41 GTTYLCIHKTTNAHFACKSI---PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTY 97
G C H+ T A K + PK R++ D W+ S P++V I Y
Sbjct: 43 GKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQA-------SGGPHIVCILDVY 91
Query: 98 ED----SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMH 151
E+ + ++ME GGELF RI +G ++EREAA++++ I + ++ HS + H
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 151
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEI 210
RD+KPEN L+ + DA L TDFG + L +PYYVAPEVL + Y
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 211 DVWSAGVILYILLSGVPPFWAET----ESGIFKQILQGKLDFESDPWPSISDSAKDLIRK 266
D+WS GVI+YILL G PPF++ T G+ ++I G+ F + W +S+ AK LIR
Sbjct: 211 DMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRL 270
Query: 267 MLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+L+ DP R++ + + HPWI V P PL +A
Sbjct: 271 LLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 146/275 (53%), Gaps = 26/275 (9%)
Query: 41 GTTYLCIHKTTNAHFACKSI---PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTY 97
G C H+ T A K + PK R++ D W+ S P++V I Y
Sbjct: 24 GKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQA-------SGGPHIVCILDVY 72
Query: 98 ED----SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMH 151
E+ + ++ME GGELF RI +G ++EREAA++++ I + ++ HS + H
Sbjct: 73 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 132
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEI 210
RD+KPEN L+ + DA L TDFG + L +PYYVAPEVL + Y
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 211 DVWSAGVILYILLSGVPPFWAET----ESGIFKQILQGKLDFESDPWPSISDSAKDLIRK 266
D+WS GVI+YILL G PPF++ T G+ ++I G+ F + W +S+ AK LIR
Sbjct: 192 DMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRL 251
Query: 267 MLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+L+ DP R++ + + HPWI V P PL +A
Sbjct: 252 LLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A + I KRK + +V EI+
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 207 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 420
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 10/293 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCRE--DYDDVWREIQIMHHLSEHPNVVQIKGTY 97
F CI++ T FA K + K +D+ RE I H L +HP++V++ TY
Sbjct: 39 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETY 97
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH----YSEREAAKLIKTIVSVVEGCHSLGVMHRD 153
+++V E G +L IV + YSE A+ ++ I+ + CH ++HRD
Sbjct: 98 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 157
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEID 211
+KP L + + A + FG+++ + G VG+P+++APEV+ + YG +D
Sbjct: 158 VKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVD 217
Query: 212 VWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
VW GVIL+ILLSG PF+ T+ +F+ I++GK W IS+SAKDL+R+ML D
Sbjct: 218 VWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLD 276
Query: 272 PRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIA 324
P RI+ +E L HPW+ + K + +L+ F A KLK L ++
Sbjct: 277 PAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVS 329
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 12/276 (4%)
Query: 25 LRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD-----DVWREIQ 79
LRD Y G L + T A + I KRK + +V EI+
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 80 IMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS 139
I+ L+ HP +++IK + D+ ++V+EL GGELFD++V E ++
Sbjct: 193 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 140 VVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAP 199
V+ H G++HRDLKPEN L + +D + TDFG S + + G+P Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 200 EVLLK----HYGPEIDVWSAGVILYILLSGVPPFWA-ETESGIFKQILQGKLDFESDPWP 254
EVL+ Y +D WS GVIL+I LSG PPF T+ + QI GK +F + W
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
+S+ A DL++K+L DP+ R + E L HPW+ D+
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 10/293 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCRE--DYDDVWREIQIMHHLSEHPNVVQIKGTY 97
F CI++ T FA K + K +D+ RE I H L +HP++V++ TY
Sbjct: 37 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETY 95
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH----YSEREAAKLIKTIVSVVEGCHSLGVMHRD 153
+++V E G +L IV + YSE A+ ++ I+ + CH ++HRD
Sbjct: 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEID 211
+KP L + + A + FG+++ + G VG+P+++APEV+ + YG +D
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVD 215
Query: 212 VWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
VW GVIL+ILLSG PF+ T+ +F+ I++GK W IS+SAKDL+R+ML D
Sbjct: 216 VWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLD 274
Query: 272 PRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIA 324
P RI+ +E L HPW+ + K + +L+ F A KLK L ++
Sbjct: 275 PAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVS 327
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 141/272 (51%), Gaps = 19/272 (6%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 76 GKVLQIFNKRTQEKFALKXL--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 127
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +V E GGELF RI +G ++EREA+++ K+I ++ HS+ + HRD+
Sbjct: 128 YAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDV 187
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVW 213
KPEN L+ + +A L TDFG + L+ +PYYVAPEVL + Y D W
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXW 247
Query: 214 SAGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
S GVI YILL G PPF++ G +I G+ +F + W +S+ K LIR +L+
Sbjct: 248 SLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLK 307
Query: 270 RDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R + E HPWI T P PL ++
Sbjct: 308 TEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 139/252 (55%), Gaps = 7/252 (2%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + C T A K I R + +D ++V EI +M+ L +H N++Q+ +E
Sbjct: 102 FGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQL-DHANLIQLYDAFES 157
Query: 100 SVFVHLVMELCAGGELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ LVME GGELFDRI+ + + +E + +K I + H + ++H DLKPEN
Sbjct: 158 KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPEN 217
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHY-GPEIDVWSAGV 217
L + D ++ DFGL+ YKP + L G+P ++APEV+ + D+WS GV
Sbjct: 218 ILC-VNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGV 276
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
I Y+LLSG+ PF + ++ IL + D E + + IS+ AK+ I K+L ++ RIS
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS 336
Query: 278 AHEVLCHPWIVD 289
A E L HPW+ D
Sbjct: 337 ASEALKHPWLSD 348
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 151/298 (50%), Gaps = 52/298 (17%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKL--LCREDYDDVWREIQIMHHLSEHPNVVQIKGTY 97
+G + I T A A K + K K+ + +D + + E+++M L HPN+ ++ Y
Sbjct: 39 YGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVY 97
Query: 98 EDSVFVHLVMELCAGGELFDRI--------------VAKGH------------------- 124
ED ++ LVMELC GG L D++ V K
Sbjct: 98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGF 157
Query: 125 -----YSEREA--AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL 177
+ +RE + +++ I S + H+ G+ HRD+KPENFLF T+ ++ DFGL
Sbjct: 158 RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGL 216
Query: 178 SV-FYK--PGQY--LSDVVGSPYYVAPEVLL---KHYGPEIDVWSAGVILYILLSGVPPF 229
S FYK G+Y ++ G+PY+VAPEVL + YGP+ D WSAGV+L++LL G PF
Sbjct: 217 SKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
Query: 230 WAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
++ Q+L KL FE+ + +S A+DL+ +L R+ R A L HPWI
Sbjct: 277 PGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 163/323 (50%), Gaps = 37/323 (11%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCRED-YDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG L H T A K I R+LL + D + V REI + L HP+++++
Sbjct: 22 FGKVKLATHYKTQQKVALKFI-SRQLLKKSDMHMRVEREISYLK-LLRHPHIIKLYDVIT 79
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +V+E AGGELFD IV K +E E + + I+ +E CH ++HRDLKPEN
Sbjct: 80 TPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPEN 138
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL--LKHYGPEIDVWSAG 216
L D D+ + DFGLS G +L GSP Y APEV+ + GPE+DVWS G
Sbjct: 139 LLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCG 195
Query: 217 VILYILLSGVPPFWAETESGIFKQI---LQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
++LY++L G PF E +FK++ + DF +S A+ LIR+M+ DP
Sbjct: 196 IVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLIRRMIVADPM 248
Query: 274 RRISAHEVLCHPWIVDDTVAPD--KPL--------DSAVLSRLKHFCAMNKLKKMALRVI 323
+RI+ E+ PW + PD +P+ DS ++S+L ++ I
Sbjct: 249 QRITIQEIRRDPWF--NVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSE------DYI 300
Query: 324 AERLSEEEIGGLKELFKMIDTDE 346
E L +E +KE + ++ ++
Sbjct: 301 VEALRSDENNEVKEAYNLLHENQ 323
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 142/261 (54%), Gaps = 15/261 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A + I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 27 FAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-HPNIVKLFEVIET 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L + GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L++K L +P +R +
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGT 257
Query: 278 AHEVLCHPWIV----DDTVAP 294
+++ W+ DD + P
Sbjct: 258 LEQIMKDRWMNVGHEDDELKP 278
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 131/249 (52%), Gaps = 11/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L H TT A K I K+ L + + REI + L HP+++++ +
Sbjct: 27 FGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHPHIIKLYDVIKS 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ +V+E AG ELFD IV + SE+EA + + I+S VE CH ++HRDLKPEN
Sbjct: 86 KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWSAGV 217
L D + + DFGLS G +L GSP Y APEV+ + GPE+DVWS GV
Sbjct: 145 LLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY++L PF E+ +FK I G +S A LI++ML +P RIS
Sbjct: 202 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRIS 257
Query: 278 AHEVLCHPW 286
HE++ W
Sbjct: 258 IHEIMQDDW 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 141/261 (54%), Gaps = 15/261 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HPNIVKLFEVIET 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L++K L +P +R +
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGT 257
Query: 278 AHEVLCHPWIV----DDTVAP 294
+++ W+ DD + P
Sbjct: 258 LEQIMKDRWMNVGHEDDELKP 278
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 141/261 (54%), Gaps = 15/261 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HPNIVKLFEVIET 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L++K L +P +R +
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGT 257
Query: 278 AHEVLCHPWIV----DDTVAP 294
+++ W+ DD + P
Sbjct: 258 LEQIMKDRWMNVGHEDDELKP 278
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 135/265 (50%), Gaps = 10/265 (3%)
Query: 28 HYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEH 87
HY FG + H+ T A K + ++K+ + + REIQ + L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRH 70
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P+++++ +VME +GGELFD I G E EA +L + I+S V+ CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--H 205
V+HRDLKPEN L D +AK+ DFGLS G++L D GSP Y APEV+ +
Sbjct: 131 MVVHRDLKPENVLLDAHM-NAKI--ADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIR 265
GPE+D+WS GVILY LL G PF E +FK+I G ++ S L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 266 KMLERDPRRRISAHEVLCHPWIVDD 290
ML+ DP +R + ++ H W D
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 131/249 (52%), Gaps = 11/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L H TT A K I K+ L + + REI + L HP+++++ +
Sbjct: 26 FGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHPHIIKLYDVIKS 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ +V+E AG ELFD IV + SE+EA + + I+S VE CH ++HRDLKPEN
Sbjct: 85 KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 143
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWSAGV 217
L D + + DFGLS G +L GSP Y APEV+ + GPE+DVWS GV
Sbjct: 144 LLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 200
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY++L PF E+ +FK I G +S A LI++ML +P RIS
Sbjct: 201 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRIS 256
Query: 278 AHEVLCHPW 286
HE++ W
Sbjct: 257 IHEIMQDDW 265
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 131/249 (52%), Gaps = 11/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L H TT A K I K+ L + + REI + L HP+++++ +
Sbjct: 21 FGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHPHIIKLYDVIKS 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ +V+E AG ELFD IV + SE+EA + + I+S VE CH ++HRDLKPEN
Sbjct: 80 KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 138
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWSAGV 217
L D + + DFGLS G +L GSP Y APEV+ + GPE+DVWS GV
Sbjct: 139 LLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 195
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY++L PF E+ +FK I G +S A LI++ML +P RIS
Sbjct: 196 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRIS 251
Query: 278 AHEVLCHPW 286
HE++ W
Sbjct: 252 IHEIMQDDW 260
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 131/249 (52%), Gaps = 11/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L H TT A K I K+ L + + REI + L HP+++++ +
Sbjct: 17 FGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHPHIIKLYDVIKS 75
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ +V+E AG ELFD IV + SE+EA + + I+S VE CH ++HRDLKPEN
Sbjct: 76 KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 134
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWSAGV 217
L D + + DFGLS G +L GSP Y APEV+ + GPE+DVWS GV
Sbjct: 135 LLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 191
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY++L PF E+ +FK I G +S A LI++ML +P RIS
Sbjct: 192 ILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRIS 247
Query: 278 AHEVLCHPW 286
HE++ W
Sbjct: 248 IHEIMQDDW 256
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 139/259 (53%), Gaps = 14/259 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K + K L D + EI+ + +L H ++ Q+ E
Sbjct: 23 FAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNL-RHQHICQLYHVLET 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ + +V+E C GGELFD I+++ SE E + + IVS V HS G HRDLKPEN
Sbjct: 80 ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQ--YLSDVVGSPYYVAPEVLL--KHYGPEIDVWSA 215
LFD + KL DFGL K + +L GS Y APE++ + G E DVWS
Sbjct: 140 LFD---EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSM 196
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G++LY+L+ G PF + ++K+I++GK D W +S S+ L+++ML+ DP++R
Sbjct: 197 GILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSSILLLQQMLQVDPKKR 252
Query: 276 ISAHEVLCHPWIVDDTVAP 294
IS +L HPWI+ D P
Sbjct: 253 ISMKNLLNHPWIMQDYNYP 271
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 15/261 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A + I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 27 FAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-HPNIVKLFEVIET 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L++K L +P +R +
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGT 257
Query: 278 AHEVLCHPWIV----DDTVAP 294
+++ W+ DD + P
Sbjct: 258 LEQIMKDRWMNVGHEDDELKP 278
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 28 HYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEH 87
HY FG + H+ T A K + ++K+ + + REIQ + L H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRH 75
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P+++++ + +VME +GGELFD I G E+E+ +L + I+S V+ CH
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL--LKH 205
V+HRDLKPEN L D +AK+ DFGLS G++L GSP Y APEV+ +
Sbjct: 136 MVVHRDLKPENVLLDAHM-NAKI--ADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIR 265
GPE+D+WS+GVILY LL G PF + +FK+I G F + + ++ S L++
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSVISLLK 248
Query: 266 KMLERDPRRRISAHEVLCHPWIVDDT---VAPDKPLDSAVLSRLKHFCAMNKLKKMALRV 322
ML+ DP +R + ++ H W D + P+ P S+ + + AL+
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM-----------IDDEALKE 297
Query: 323 IAERL--SEEEI 332
+ E+ SEEE+
Sbjct: 298 VCEKFECSEEEV 309
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 137/250 (54%), Gaps = 11/250 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 25 FAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIET 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++L+ME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 83 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 143 LLDADMN---IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L+++ L +P +R +
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKRFLVLNPIKRGT 255
Query: 278 AHEVLCHPWI 287
+++ WI
Sbjct: 256 LEQIMKDRWI 265
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 141/261 (54%), Gaps = 15/261 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 20 FAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HPNIVKLFEVIET 77
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 78 EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 137
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 138 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L++K L +P +R +
Sbjct: 195 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGT 250
Query: 278 AHEVLCHPWIV----DDTVAP 294
+++ W+ DD + P
Sbjct: 251 LEQIMKDRWMNVGHEDDELKP 271
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 15/261 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HPNIVKLFEVIET 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L G+P Y APE+ K+ GPE+DVWS GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L++K L +P +R +
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGT 257
Query: 278 AHEVLCHPWIV----DDTVAP 294
+++ W+ DD + P
Sbjct: 258 LEQIMKDRWMNVGHEDDELKP 278
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 134/265 (50%), Gaps = 10/265 (3%)
Query: 28 HYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEH 87
HY FG + H+ T A K + ++K+ + + REIQ + L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRH 70
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P+++++ +VME +GGELFD I G E EA +L + I+S V+ CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--H 205
V+HRDLKPEN L D +AK+ DFGLS G++L GSP Y APEV+ +
Sbjct: 131 MVVHRDLKPENVLLDAHM-NAKI--ADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIR 265
GPE+D+WS GVILY LL G PF E +FK+I G ++ S L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 266 KMLERDPRRRISAHEVLCHPWIVDD 290
ML+ DP +R + ++ H W D
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 137/250 (54%), Gaps = 11/250 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 28 FAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIET 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++L+ME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 86 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 145
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L G+P Y APE+ K+ GPE+DVWS GV
Sbjct: 146 LLDADMN---IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +S ++L+++ L +P +R +
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKRFLVLNPIKRGT 258
Query: 278 AHEVLCHPWI 287
+++ WI
Sbjct: 259 LEQIMKDRWI 268
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 145/252 (57%), Gaps = 8/252 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG +L +++ K+I K + + + + EI+++ L +HPN+++I +ED
Sbjct: 35 FGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFED 91
Query: 100 SVFVHLVMELCAGGELFDRIV---AKGH-YSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+++VME C GGEL +RIV A+G SE A+L+K +++ + HS V+H+DLK
Sbjct: 92 YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLK 151
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGPEIDVWSA 215
PEN LF + + DFGL+ +K ++ ++ G+ Y+APEV + + D+WSA
Sbjct: 152 PENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSA 211
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
GV++Y LL+G PF + + ++ + ++ + P ++ A DL+++ML +DP RR
Sbjct: 212 GVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERR 270
Query: 276 ISAHEVLCHPWI 287
SA +VL H W
Sbjct: 271 PSAAQVLHHEWF 282
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 38/271 (14%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED- 99
G +K T FA K + +D RE+++ S+ P++V+I YE+
Sbjct: 32 GKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVYENL 83
Query: 100 ---SVFVHLVMELCAGGELFDRIVAKG--HYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
+ +VME GGELF RI +G ++EREA++++K+I ++ HS+ + HRD+
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 155 KPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGPEIDVWS 214
KPEN L+ + +A L TDFG A E + Y D+WS
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGF--------------------AKETTGEKYDKSCDMWS 183
Query: 215 AGVILYILLSGVPPFWAE----TESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLER 270
GVI+YILL G PPF++ G+ +I G+ +F + W +S+ K LIR +L+
Sbjct: 184 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 243
Query: 271 DPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
+P +R++ E + HPWI+ T P PL ++
Sbjct: 244 EPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 134/252 (53%), Gaps = 31/252 (12%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKL 133
V+RE++ ++ + N++++ +ED +LV E GG + I + H++EREA+++
Sbjct: 57 VFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRV 116
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV--- 190
++ + + ++ H+ G+ HRDLKPEN L ++ + + DF L K + +
Sbjct: 117 VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 191 -----VGSPYYVAPEVL------LKHYGPEIDVWSAGVILYILLSGVPPF---------W 230
GS Y+APEV+ Y D+WS GV+LYI+LSG PPF W
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
Query: 231 AETE------SGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCH 284
E + +F+ I +GK +F W IS AKDLI K+L RD ++R+SA +VL H
Sbjct: 237 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 285 PWIVDDTVAPDK 296
PW+ AP+K
Sbjct: 297 PWVQGQ--APEK 306
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 35/290 (12%)
Query: 46 CIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL 105
CI+ T+ +A K I K+ R V+RE+++++ H NV+++ +E+ +L
Sbjct: 32 CINLITSQEYAVKIIEKQPGHIR---SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDG 165
V E GG + I + H++E EA+ +++ + S ++ H+ G+ HRDLKPEN L +
Sbjct: 89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN 148
Query: 166 DDAKLMATDFGLSVFYKPGQYLSDV--------VGSPYYVAPEVL------LKHYGPEID 211
+ + DFGL K S + GS Y+APEV+ Y D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 212 VWSAGVILYILLSGVPPF---------WAETESG------IFKQILQGKLDFESDPWPSI 256
+WS GVILYILLSG PPF W E+ +F+ I +GK +F W I
Sbjct: 209 LWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHI 268
Query: 257 SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA-VLSR 305
S +AKDLI K+L RD ++R+SA +VL HPW+ AP+ L + VL R
Sbjct: 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWV--QGCAPENTLPTPMVLQR 316
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D+Y FG + C+ K T F K I L D V EI IM+ L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQL-H 106
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCH 145
HP ++ + +ED + L++E +GGELFDRI A+ + SE E ++ ++ H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 146 SLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH 205
++H D+KPEN + +T + + DFGL+ P + + + + APE++ +
Sbjct: 167 EHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 225
Query: 206 -YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
G D+W+ GV+ Y+LLSG+ PF E + + + + +F+ D + S+S AKD I
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285
Query: 265 RKMLERDPRRRISAHEVLCHPWIVDD 290
+ +L+++PR+R++ H+ L HPW+ D
Sbjct: 286 KNLLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E GE++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 85 ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 145 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 256
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 257 REVLEHPWITANSSKPS 273
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 54 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 114 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGATW--TLCGTPEYLA 227
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 283
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 284 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 133/249 (53%), Gaps = 11/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++I L+ HPN+V++ E
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLN-HPNIVKLFEVIET 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LV E +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 85 EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + + DFG S + G L G+P Y APE+ K+ GPE+DVWS GV
Sbjct: 145 LLDADXN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
ILY L+SG PF + + +++L+GK P+ +D ++L++K L +P +R +
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYXSTD-CENLLKKFLILNPSKRGT 257
Query: 278 AHEVLCHPW 286
++ W
Sbjct: 258 LEQIXKDRW 266
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLAGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E GE++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 85 ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 145 LLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 256
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 257 REVLEHPWITANSSKPS 273
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T HFA K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTWX--LCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T HFA K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLXGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T HFA K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTWX--LCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 81 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 140
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P +D+ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 141 LLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 252
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 253 REVLEHPWITANSSKPS 269
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P +D+ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 34 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 85 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P +D+ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 145 LLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 256
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 257 REVLEHPWITANSSKPS 273
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTWX--LCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFA 298
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 7/208 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F L H T A K I K +L ++RE++IM L+ HPN+V++ E
Sbjct: 28 FAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIET 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++LVME +GGE+FD +VA G E+EA + IVS V+ CH ++HRDLK EN
Sbjct: 86 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENL 145
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGV 217
L D D + DFG S + G L GSP Y APE+ K+ GPE+DVWS GV
Sbjct: 146 LLD---GDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGK 245
ILY L+SG PF + + +++L+GK
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P +D+ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 136/256 (53%), Gaps = 10/256 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 105
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 106 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 165
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P D+ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 166 LLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 222 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 277
Query: 279 HEVLCHPWIVDDTVAP 294
EVL HPWI ++ P
Sbjct: 278 REVLEHPWITANSSKP 293
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFA 299
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 149/290 (51%), Gaps = 35/290 (12%)
Query: 46 CIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL 105
CI+ T+ +A K I K+ R V+RE+++++ H NV+++ +E+ +L
Sbjct: 32 CINLITSQEYAVKIIEKQPGHIR---SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDG 165
V E GG + I + H++E EA+ +++ + S ++ H+ G+ HRDLKPEN L +
Sbjct: 89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN 148
Query: 166 DDAKLMATDFGLSVFYKPGQYLSDV--------VGSPYYVAPEVL------LKHYGPEID 211
+ + DF L K S + GS Y+APEV+ Y D
Sbjct: 149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 212 VWSAGVILYILLSGVPPF---------WAETESG------IFKQILQGKLDFESDPWPSI 256
+WS GVILYILLSG PPF W E+ +F+ I +GK +F W I
Sbjct: 209 LWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHI 268
Query: 257 SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSA-VLSR 305
S +AKDLI K+L RD ++R+SA +VL HPW+ AP+ L + VL R
Sbjct: 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWV--QGCAPENTLPTPMVLQR 316
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 144/275 (52%), Gaps = 16/275 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 20 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 79
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 80 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 138
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 193
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 249
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWI 287
KDL+R +L+ D +R +++ H W
Sbjct: 250 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G ++E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 114 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 227
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 283
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 284 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 38 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 96
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 97 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 156
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 157 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 212
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 213 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 268
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 269 REVLEHPWITANSSKPS 285
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 16/275 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 86 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 144
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 199
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 255
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWI 287
KDL+R +L+ D +R +++ H W
Sbjct: 256 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 105
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 106 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 165
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 166 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 222 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 277
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 278 REVLEHPWITANSSKPS 294
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 136/256 (53%), Gaps = 10/256 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 83 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P D+ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 143 LLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 254
Query: 279 HEVLCHPWIVDDTVAP 294
EVL HPWI ++ P
Sbjct: 255 REVLEHPWITANSSKP 270
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
S V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P +++ G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G + E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQG---YIQVTDFGFAKRVKGRTWX--LCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE+++ K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G + E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 83 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 143 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 254
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 255 REVLEHPWITANSSKPS 271
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 54 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G + E A IV
Sbjct: 114 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 172
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 227
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 283
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 284 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ ++ + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFGL+ K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIQVTDFGLAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 85 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 145 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 256
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 257 REVLEHPWITANSSKPS 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
P ++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 7/264 (2%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
DHY FG + + T +FA K + D + V +EIQ M L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVL-R 106
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK-GHYSEREAAKLIKTIVSVVEGCH 145
HP +V + +ED + ++ E +GGELF+++ + SE EA + ++ + + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 146 SLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-K 204
+H DLKPEN +F T + +L DFGL+ P Q + G+ + APEV K
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
G D+WS GV+ YILLSG+ PF E + + + + + + IS+ KD I
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 265 RKMLERDPRRRISAHEVLCHPWIV 288
RK+L DP R++ H+ L HPW+
Sbjct: 286 RKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 16/275 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 28 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 87
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G + E A IV
Sbjct: 88 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 146
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 201
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 257
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWI 287
KDL+R +L+ D +R +++ H W
Sbjct: 258 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G + E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 7/264 (2%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
DHY FG + + T +FA K + D + V +EIQ M L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVL-R 212
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK-GHYSEREAAKLIKTIVSVVEGCH 145
HP +V + +ED + ++ E +GGELF+++ + SE EA + ++ + + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 146 SLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-K 204
+H DLKPEN +F T + +L DFGL+ P Q + G+ + APEV K
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLI 264
G D+WS GV+ YILLSG+ PF E + + + + + + IS+ KD I
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391
Query: 265 RKMLERDPRRRISAHEVLCHPWIV 288
RK+L DP R++ H+ L HPW+
Sbjct: 392 RKLLLADPNTRMTIHQALEHPWLT 415
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ ++ + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFGL+ K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGLAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 85 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 144
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE + + + ++D+WS GV+
Sbjct: 145 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVL 200
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPXL 256
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 257 REVLEHPWITANSSKPS 273
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 133/272 (48%), Gaps = 12/272 (4%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y FG L K +N A K I + + + +V REI I H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREI-INHRSLR 73
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HPN+V+ K + +VME +GGELF+RI G +SE EA + ++S V CH+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 147 LGVMHRDLKPENFLFDTDGDDA-KLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK- 204
+ V HRDLK EN L DG A +L DFG S VG+P Y+APEVLLK
Sbjct: 134 MQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 205 -HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLD--FESDPWPSISDSAK 261
+ G DVWS GV LY++L G PF E F++ + L+ + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVA 293
LI ++ DP +RIS E+ H W + + A
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWFLKNLPA 283
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRR-----RISAHEVLCHPWIV 288
KDL+R +L+ D + + +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFA 298
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 83 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 143 LLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 254
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 255 REVLEHPWITANSSKPS 271
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 25 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 83
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 84 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 143
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 144 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 200 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 255
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 256 REVLEHPWITANSSKPS 272
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 134/272 (49%), Gaps = 12/272 (4%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y FG L K +N A K I + + + ++V REI I H
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLR 72
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HPN+V+ K + +VME +GGELF+RI G +SE EA + ++S V CH+
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 147 LGVMHRDLKPENFLFDTDGDDA-KLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK- 204
+ V HRDLK EN L DG A +L DFG S VG+P Y+APEVLLK
Sbjct: 133 MQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 205 -HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLD--FESDPWPSISDSAK 261
+ G DVWS GV LY++L G PF E F++ + L+ + + IS +
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 250
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVA 293
LI ++ DP +RIS E+ H W + + A
Sbjct: 251 HLISRIFVADPAKRISIPEIRNHEWFLKNLPA 282
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 20 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 78
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 79 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 138
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 139 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 194
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 195 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 250
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 251 REVLEHPWITANSSKPS 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 82 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 141
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 142 LLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 253
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 254 REVLEHPWITANSSKPS 270
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK + H+A K + K+K++ + + E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME AGGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P +A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEALA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 81 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 140
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 141 LLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 252
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 253 REVLEHPWITANSSKPS 269
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--TLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 142/275 (51%), Gaps = 16/275 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G + E A IV
Sbjct: 86 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 144
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 199
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 255
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWI 287
KDL+R +L+ D +R +++ H W
Sbjct: 256 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 134/272 (49%), Gaps = 12/272 (4%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y FG L K +N A K I + + + ++V REI I H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLR 73
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HPN+V+ K + +VME +GGELF+RI G +SE EA + ++S V CH+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 147 LGVMHRDLKPENFLFDTDGDDA-KLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK- 204
+ V HRDLK EN L DG A +L FG S D VG+P Y+APEVLLK
Sbjct: 134 MQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKK 191
Query: 205 -HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLD--FESDPWPSISDSAK 261
+ G DVWS GV LY++L G PF E F++ + L+ + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVA 293
LI ++ DP +RIS E+ H W + + A
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWFLKNLPA 283
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 82 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 141
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L +FG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 142 LLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 253
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 254 REVLEHPWITANSSKPS 270
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL + + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 83
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 84 ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 143
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L ++G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 144 LLGSNGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G+PPF A T +++I + + F +++ A+DLI ++L+ + +R++
Sbjct: 200 CYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTL 255
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 256 AEVLEHPWIKANSSKPS 272
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 142/275 (51%), Gaps = 16/275 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 19 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 79 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 137
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--TLCGTPEYLA 192
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 248
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWI 287
KDL+R +L+ D +R +++ H W
Sbjct: 249 SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 83 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L +FG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 143 LLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 254
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 255 REVLEHPWITANSSKPS 271
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 80 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 140 LLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 251
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 252 REVLEHPWITANSSKPS 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 81 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 140
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG S + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 141 LLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 252
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 253 REVLEHPWITANSSKPS 269
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 142/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL + + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 83
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 84 ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 143
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L ++G+ L DFG SV + P + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 144 LLGSNGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G+PPF A T +++I + + F +++ A+DLI ++L+ + +R++
Sbjct: 200 CYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTL 255
Query: 279 HEVLCHPWIVDDTVAPD 295
EVL HPWI ++ P
Sbjct: 256 AEVLEHPWIKANSSKPS 272
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 83 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 143 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 254
Query: 279 HEVLCHPWIVDDT 291
EVL HPWI ++
Sbjct: 255 REVLEHPWITANS 267
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G + E A IV
Sbjct: 94 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L HK T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I ++ P +V+++ +++D+ +++V+E GGE+F + G +SE A IV
Sbjct: 94 RIQQAVN-FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + DFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIKVADFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 133/272 (48%), Gaps = 12/272 (4%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y FG L K +N A K I + + + ++V REI I H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLR 73
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HPN+V+ K + +VME +GGELF+RI G +SE EA + ++S V CH+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 147 LGVMHRDLKPENFLFDTDGDDA-KLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK- 204
+ V HRDLK EN L DG A +L FG S VG+P Y+APEVLLK
Sbjct: 134 MQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 205 -HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLD--FESDPWPSISDSAK 261
+ G DVWS GV LY++L G PF E F++ + L+ + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVA 293
LI ++ DP +RIS E+ H W + + A
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWFLKNLPA 283
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + DFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIKVADFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 134/253 (52%), Gaps = 10/253 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K + A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 83 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 142
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 143 LLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 254
Query: 279 HEVLCHPWIVDDT 291
EVL HPWI ++
Sbjct: 255 REVLEHPWITANS 267
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P + +++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P + +++ +++D+ +++VME GGE+F + G +SE A IV
Sbjct: 94 RILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 10/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K A K + K +L + REI+I HL HPN++++ + D
Sbjct: 28 FGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHD 86
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++L++E GEL+ + G + E+ +A ++ + + CH V+HRD+KPEN
Sbjct: 87 RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENL 146
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L G+ L DFG SV + P + G+ Y+ PE++ K + ++D+W AGV+
Sbjct: 147 LMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 202
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G+PPF + + + ++I+ L F P +SD +KDLI K+L P +R+
Sbjct: 203 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPL 258
Query: 279 HEVLCHPWI 287
V+ HPW+
Sbjct: 259 KGVMEHPWV 267
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 134/253 (52%), Gaps = 10/253 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K A K + K +L + RE++I HL HPN++++ G + D
Sbjct: 18 FGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHD 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+L++E G ++ + + E+ A I + + + CHS V+HRD+KPEN
Sbjct: 77 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 136
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L + G+ L DFG SV + P + + G+ Y+ PE++ + + ++D+WS GV+
Sbjct: 137 LLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 192
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G PPF A T +K+I + + F +++ A+DLI ++L+ +P +R
Sbjct: 193 CYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPML 248
Query: 279 HEVLCHPWIVDDT 291
EVL HPWI ++
Sbjct: 249 REVLEHPWITANS 261
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 132/272 (48%), Gaps = 12/272 (4%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y FG L K N A K I + + + ++V REI I H
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREI-INHRSLR 73
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HPN+V+ K + +VME +GGELF+RI G +SE EA + ++S V H+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 147 LGVMHRDLKPENFLFDTDGDDA-KLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK- 204
+ V HRDLK EN L DG A +L DFG S VG+P Y+APEVLLK
Sbjct: 134 MQVAHRDLKLENTLL--DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 205 -HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLD--FESDPWPSISDSAK 261
+ G DVWS GV LY++L G PF E F++ + L+ + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVA 293
LI ++ DP +RIS E+ H W + + A
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWFLKNLPA 283
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 10/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K A K + K +L + REI+I HL HPN++++ + D
Sbjct: 27 FGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHD 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++L++E GEL+ + G + E+ +A ++ + + CH V+HRD+KPEN
Sbjct: 86 RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENL 145
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L G+ L DFG SV + P + G+ Y+ PE++ K + ++D+W AGV+
Sbjct: 146 LMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G+PPF + + + ++I+ L F P +SD +KDLI K+L P +R+
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPL 257
Query: 279 HEVLCHPWI 287
V+ HPW+
Sbjct: 258 KGVMEHPWV 266
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGFAKRVKGRTW--XLCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 10/249 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K A K + K +L + REI+I HL HPN++++ + D
Sbjct: 27 FGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHD 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++L++E GEL+ + G + E+ +A ++ + + CH V+HRD+KPEN
Sbjct: 86 RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENL 145
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
L G+ L DFG SV + P + G+ Y+ PE++ K + ++D+W AGV+
Sbjct: 146 LMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y L G+PPF + + + ++I+ L F P +SD +KDLI K+L P +R+
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPL 257
Query: 279 HEVLCHPWI 287
V+ HPW+
Sbjct: 258 KGVMEHPWV 266
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GG++F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + DFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIKVADFGFAKRVKGRTWX--LCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P +V+++ +++D+ +++VME GG++F + G +SE A IV
Sbjct: 93 RILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN L D G + DFG + K + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQG---YIKVADFGFAKRVKGRTWX--LCGTPEYLA 206
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 140/276 (50%), Gaps = 16/276 (5%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREI 78
P Q D + FG L H T H+A K + K+K++ + + E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 79 QIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIV 138
+I+ ++ P + +++ +++D+ +++VME GGE+F + G + E A IV
Sbjct: 94 RILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 139 SVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVA 198
E HSL +++RDLKPEN + D G + TDFG + K + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQG---YIKVTDFGFAKRVKGRTW--XLCGTPEYLA 207
Query: 199 PEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSIS 257
PE++L K Y +D W+ GV++Y + +G PPF+A+ I+++I+ GK+ F S S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 263
Query: 258 DSAKDLIRKMLERDPRRRI-----SAHEVLCHPWIV 288
KDL+R +L+ D +R +++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 12/255 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLL--CREDYDDVWREIQIMHHLSEHPNVVQIKGTY 97
F CI K+T +A K + KR+ CR + + EI ++ P V+ + Y
Sbjct: 42 FAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE---ILHEIAVLELAKSCPRVINLHEVY 98
Query: 98 EDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
E++ + L++E AGGE+F + + SE + +LIK I+ V H ++H DLK
Sbjct: 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK 158
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHYGP---EIDV 212
P+N L + + DFG+S L +++G+P Y+APE+L +Y P D+
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYDPITTATDM 216
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
W+ G+I Y+LL+ PF E + I Q +D+ + + S+S A D I+ +L ++P
Sbjct: 217 WNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNP 276
Query: 273 RRRISAHEVLCHPWI 287
+R +A L H W+
Sbjct: 277 EKRPTAEICLSHSWL 291
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 71/75 (94%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+AERLSEEEIGGLKELFKMIDTD SGTITF+ELK GLKRVGS+LMESEIK LMDAADID
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 383 NGTIEYGEFIAATLH 397
+GTI+YGEFIAAT+H
Sbjct: 73 SGTIDYGEFIAATVH 87
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 411 FSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
F D D SG IT DEL+ K G L E + +++ D D G IDYGEF
Sbjct: 29 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 128/260 (49%), Gaps = 14/260 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T A K I + + ++V REI I H HPN+V+ K
Sbjct: 33 FGVARLMRDKLTKELVAVKYIERGAAI----DENVQREI-INHRSLRHPNIVRFKEVILT 87
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ ++ME +GGEL++RI G +SE EA + ++S V CHS+ + HRDLK EN
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENT 147
Query: 160 LFDTDGDDA-KLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWSAG 216
L DG A +L DFG S VG+P Y+APEVLL+ + G DVWS G
Sbjct: 148 LL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCG 205
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP---SISDSAKDLIRKMLERDPR 273
V LY++L G PF E +++ +Q L + P IS LI ++ DP
Sbjct: 206 VTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IPDDIRISPECCHLISRIFVADPA 264
Query: 274 RRISAHEVLCHPWIVDDTVA 293
RIS E+ H W + + A
Sbjct: 265 TRISIPEIKTHSWFLKNLPA 284
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 149/294 (50%), Gaps = 16/294 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + C+ ++ + K + + D V +EI I++ ++ H N++ + ++E
Sbjct: 18 FGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILN-IARHRNILHLHESFES 72
Query: 100 SVFVHLVMELCAGGELFDRI-VAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ ++ E +G ++F+RI + +ERE + + ++ HS + H D++PEN
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN 132
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGPEIDVWSAG 216
++ T + + +FG + KPG + +P Y APEV +H D+WS G
Sbjct: 133 IIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH-QHDVVSTATDMWSLG 190
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
++Y+LLSG+ PF AET I + I+ + F+ + + IS A D + ++L ++ + R+
Sbjct: 191 TLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM 250
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVI--AERLS 328
+A E L HPW+ + + + V+ LKH + L K L ++ A R+S
Sbjct: 251 TASEALQHPWLKQKI----ERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAARIS 300
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L HK+T +A K + K +++ R D W E IM + P VVQ+ ++D
Sbjct: 82 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLFYAFQD 140
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++++VME GG+L + +++ E+ A +V ++ HS+G +HRD+KP+N
Sbjct: 141 DRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNM 199
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVLLK-----HYGPEIDV 212
L D G L DFG + K G D VG+P Y++PEVL +YG E D
Sbjct: 200 LLDKSG---HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 256
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGK--LDFESDPWPSISDSAKDLIRKML-E 269
WS GV LY +L G PF+A++ G + +I+ K L F D IS AK+LI L +
Sbjct: 257 WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLTD 314
Query: 270 RDPRR-RISAHEVLCH--------PW-IVDDTVAPDKP 297
R+ R R E+ H W + DTVAP P
Sbjct: 315 REVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 352
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L HK+T +A K + K +++ R D W E IM + P VVQ+ ++D
Sbjct: 87 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLFYAFQD 145
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++++VME GG+L + +++ E+ A +V ++ HS+G +HRD+KP+N
Sbjct: 146 DRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNM 204
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVLLK-----HYGPEIDV 212
L D G L DFG + K G D VG+P Y++PEVL +YG E D
Sbjct: 205 LLDKSG---HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGK--LDFESDPWPSISDSAKDLIRKML-E 269
WS GV LY +L G PF+A++ G + +I+ K L F D IS AK+LI L +
Sbjct: 262 WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLTD 319
Query: 270 RDPRR-RISAHEVLCH--------PW-IVDDTVAPDKP 297
R+ R R E+ H W + DTVAP P
Sbjct: 320 REVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L HK+T +A K + K +++ R D W E IM + P VVQ+ ++D
Sbjct: 87 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLFYAFQD 145
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++++VME GG+L + +++ E+ A +V ++ HS+G +HRD+KP+N
Sbjct: 146 DRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNM 204
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVLLK-----HYGPEIDV 212
L D G L DFG + K G D VG+P Y++PEVL +YG E D
Sbjct: 205 LLDKSG---HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGK--LDFESDPWPSISDSAKDLIRKML-E 269
WS GV LY +L G PF+A++ G + +I+ K L F D IS AK+LI L +
Sbjct: 262 WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLTD 319
Query: 270 RDPRR-RISAHEVLCH--------PW-IVDDTVAPDKP 297
R+ R R E+ H W + DTVAP P
Sbjct: 320 REVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 11/249 (4%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T A K I K+ + V E++I H +HP+++++ +EDS +V+LV+E+C
Sbjct: 35 TGLEVAIKMIDKKAMYKAGMVQRVQNEVKI-HCQLKHPSILELYNYFEDSNYVYLVLEMC 93
Query: 111 AGGELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAK 169
GE+ + + +SE EA + I++ + HS G++HRDL N L + +
Sbjct: 94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN--- 150
Query: 170 LMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
+ DFGL+ K P + + G+P Y++PE+ + +G E DVWS G + Y LL G P
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
PF +T +++ D+E + SI AKDLI ++L R+P R+S VL HP++
Sbjct: 211 PFDTDTVKNTLNKVVLA--DYEMPSFLSI--EAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
Query: 288 VDDTVAPDK 296
++ K
Sbjct: 267 SRNSSTKSK 275
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 9/241 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L HK +A K + K+ +L +++ + E ++ +HP +V + +++
Sbjct: 51 FGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT 110
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ ++ V++ GGELF + + + E A I S + HSL +++RDLKPEN
Sbjct: 111 ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENI 170
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
L D+ G ++ TDFGL + S G+P Y+APEVL K Y +D W G
Sbjct: 171 LLDSQG---HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGA 227
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
+LY +L G+PPF++ + ++ IL L + P+I++SA+ L+ +L++D +R+
Sbjct: 228 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLG 283
Query: 278 A 278
A
Sbjct: 284 A 284
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 133/258 (51%), Gaps = 24/258 (9%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG +L + ++A K + K++++ R + + ++M + HP ++++ GT++D
Sbjct: 19 FGRVHLIRSRHNGRYYAMKVL-KKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 77
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ + ++M+ GGELF + + A + +E HS +++RDLKPEN
Sbjct: 78 AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENI 137
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVV----GSPYYVAPEVL-LKHYGPEIDVWS 214
L D +G + TDFG + +Y+ DV G+P Y+APEV+ K Y ID WS
Sbjct: 138 LLDKNG---HIKITDFGFA------KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWS 188
Query: 215 AGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRR 274
G+++Y +L+G PF+ +++IL +L F P ++ KDL+ +++ RD +
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQ 244
Query: 275 RI-----SAHEVLCHPWI 287
R+ +V HPW
Sbjct: 245 RLGNLQNGTEDVKNHPWF 262
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F TT L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 43 FSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 101
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 161
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 162 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 274
Query: 276 ISAHEV 281
+ E+
Sbjct: 275 LGCEEM 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 140/273 (51%), Gaps = 18/273 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L HK + +A K + K +++ R D W E IM + P VVQ+ ++D
Sbjct: 88 FGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLFCAFQD 146
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++++VME GG+L + +++ E+ A +V ++ HS+G++HRD+KP+N
Sbjct: 147 DKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNM 205
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVLLK-----HYGPEIDV 212
L D G L DFG + + G D VG+P Y++PEVL +YG E D
Sbjct: 206 LLDKHG---HLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 213 WSAGVILYILLSGVPPFWAETESGIFKQILQGK--LDFESDPWPSISDSAKDLIRKML-E 269
WS GV L+ +L G PF+A++ G + +I+ K L F D IS AK+LI L +
Sbjct: 263 WSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKHAKNLICAFLTD 320
Query: 270 RDPRR-RISAHEVLCHPWIVDDTVAPDKPLDSA 301
R+ R R E+ HP+ +D D ++A
Sbjct: 321 REVRLGRNGVEEIKQHPFFKNDQWNWDNIRETA 353
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG YL K ++ A K + K ++ + REI+I HL HPN++++ + D
Sbjct: 36 FGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HHPNILRLYNYFYD 94
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++L++E GEL+ + + E+ A +++ + + CH V+HRD+KPEN
Sbjct: 95 RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN- 153
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVI 218
G +L DFG SV + P + G+ Y+ PE++ + + ++D+W GV+
Sbjct: 154 --LLLGLKGELKIADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVL 210
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
Y LL G PPF + + + +++I++ L F + S+ A+DLI K+L +P R+
Sbjct: 211 CYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISKLLRHNPSERLPL 266
Query: 279 HEVLCHPWIVDDT--VAPDKPLDSA 301
+V HPW+ ++ V P L S
Sbjct: 267 AQVSAHPWVRANSRRVLPPSALQSV 291
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 46 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 104
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 105 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 164
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 165 LLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 277
Query: 276 ISAHEV 281
+ E+
Sbjct: 278 LGCEEM 283
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 42 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 100
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 101 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 160
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 161 LLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 273
Query: 276 ISAHEV 281
+ E+
Sbjct: 274 LGCEEM 279
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 48 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 106
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 107 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 166
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 167 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF + +P A+DL+ K+L D +R
Sbjct: 224 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARDLVEKLLVLDATKR 279
Query: 276 ISAHEV 281
+ E+
Sbjct: 280 LGCEEM 285
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 103
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 163
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 164 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWAL 220
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF +I++ + DF +P A+DL+ K+L D +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 276
Query: 276 ISAHEV 281
+ E+
Sbjct: 277 LGCEEM 282
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 103
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 163
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 164 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 276
Query: 276 ISAHEV 281
+ E+
Sbjct: 277 LGCEEM 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 101
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 161
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 162 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 274
Query: 276 ISAHEV 281
+ E+
Sbjct: 275 LGCEEM 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 103
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 163
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 164 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 276
Query: 276 ISAHEV 281
+ E+
Sbjct: 277 LGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 101
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 161
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 162 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 274
Query: 276 ISAHEV 281
+ E+
Sbjct: 275 LGCEEM 280
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 101
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 161
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 162 LLN---EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 274
Query: 276 ISAHEV 281
+ E+
Sbjct: 275 LGCEEM 280
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 46 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 104
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 105 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 164
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 165 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 277
Query: 276 ISAHEV 281
+ E+
Sbjct: 278 LGCEEM 283
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 42 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 100
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 101 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 160
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 161 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 273
Query: 276 ISAHEV 281
+ E+
Sbjct: 274 LGCEEM 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 103
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 163
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 164 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 276
Query: 276 ISAHEV 281
+ E+
Sbjct: 277 LGCEEM 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 103
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 163
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 164 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF +I++ + DF +P A+DL+ K+L D +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 276
Query: 276 ISAHEV 281
+ E+
Sbjct: 277 LGCEEM 282
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 27 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 86 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 145
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 146 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 203 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 258
Query: 276 ISAHEV 281
+ E+
Sbjct: 259 LGCEEM 264
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 20 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 78
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 79 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 138
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 139 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 196 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 251
Query: 276 ISAHEV 281
+ E+
Sbjct: 252 LGCEEM 257
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 124/262 (47%), Gaps = 10/262 (3%)
Query: 23 PRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMH 82
PR Y F Y T FA K +PK LL + + EI I H
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-H 80
Query: 83 HLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVE 142
++P+VV G +ED FV++V+E+C L + + +E EA ++ + V+
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 140
Query: 143 GCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEV 201
H+ V+HRDLK N + DD + DFGL+ + G+ D+ G+P Y+APEV
Sbjct: 141 YLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 197
Query: 202 LLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
L K + E+D+WS G ILY LL G PPF + +I + + I+ A
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVA 253
Query: 261 KDLIRKMLERDPRRRISAHEVL 282
LIR+ML DP R S E+L
Sbjct: 254 SALIRRMLHADPTLRPSVAELL 275
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 21 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 80 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 139
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 140 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 197 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 252
Query: 276 ISAHEV 281
+ E+
Sbjct: 253 LGCEEM 258
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 23 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 82 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 141
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 142 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 199 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 254
Query: 276 ISAHEV 281
+ E+
Sbjct: 255 LGCEEM 260
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 22 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 81 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 140
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 141 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 198 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 253
Query: 276 ISAHEV 281
+ E+
Sbjct: 254 LGCEEM 259
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 124/262 (47%), Gaps = 10/262 (3%)
Query: 23 PRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMH 82
PR Y F Y T FA K +PK LL + + EI I H
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-H 96
Query: 83 HLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVE 142
++P+VV G +ED FV++V+E+C L + + +E EA ++ + V+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 143 GCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEV 201
H+ V+HRDLK N + DD + DFGL+ + G+ D+ G+P Y+APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 213
Query: 202 LLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
L K + E+D+WS G ILY LL G PPF + +I + + I+ A
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVA 269
Query: 261 KDLIRKMLERDPRRRISAHEVL 282
LIR+ML DP R S E+L
Sbjct: 270 SALIRRMLHADPTLRPSVAELL 291
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 37/278 (13%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLL--------------------C---REDYDDVWR 76
+G L ++ N ++A K + K+KL+ C R + V++
Sbjct: 26 YGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQ 85
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVM--ELCAGGELFDRIVAKGHYSEREAAKLI 134
EI I+ L +HPNVV++ +D HL M EL G + + K SE +A
Sbjct: 86 EIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYF 143
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ-YLSDVVGS 193
+ ++ +E H ++HRD+KP N L G+D + DFG+S +K LS+ VG+
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEFKGSDALLSNTVGT 200
Query: 194 PYYVAPEVLLK----HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFE 249
P ++APE L + G +DVW+ GV LY + G PF E + +I L+F
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP 260
Query: 250 SDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
P I++ KDLI +ML+++P RI E+ HPW+
Sbjct: 261 DQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ ++D
Sbjct: 50 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFCFQD 108
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + GEL I G + E IVS +E H G++HRDLKPEN
Sbjct: 109 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 168
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 169 LLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 225
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 226 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 281
Query: 276 ISAHEV 281
+ E+
Sbjct: 282 LGCEEM 287
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T L T+ +A K + KR ++ V RE +M L +HP V++ T++D
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQD 103
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ + G L I G + E IVS +E H G++HRDLKPEN
Sbjct: 104 DEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 163
Query: 160 LFDTDGDDAKLMATDFGLSVFYKP---GQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSA 215
L + +D + TDFG + P + VG+ YV+PE+L K D+W+
Sbjct: 164 LLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWAL 220
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
G I+Y L++G+PPF A E IF++I++ + DF +P A+DL+ K+L D +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKR 276
Query: 276 ISAHEV 281
+ E+
Sbjct: 277 LGCEEM 282
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 23 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 82 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 141
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 142 MLDKDG---HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 198
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 199 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 254
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 255 GGPSDAKEVMEHRFFL 270
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 160 LFDTDGDDAKLMATDFGL-SVFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 137 MLDKDG---HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 250 GGPSDAKEVMEHRFFL 265
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 137 MLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 250 GGPSDAKEVMEHRFFL 265
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 137 MLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 250 GGPSDAKEVMEHRFFL 265
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 137 MLDKDG---HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 250 GGPSDAKEVMEHRFFL 265
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 21 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 80 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 139
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 140 MLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 196
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 197 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 252
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 253 GGPSDAKEVMEHRFFL 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 123/262 (46%), Gaps = 10/262 (3%)
Query: 23 PRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMH 82
PR Y F Y T FA K +PK LL + + EI I H
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-H 96
Query: 83 HLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVE 142
++P+VV G +ED FV++V+E+C L + + +E EA ++ + V+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 143 GCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEV 201
H+ V+HRDLK N + DD + DFGL+ + G+ + G+P Y+APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEV 213
Query: 202 LLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
L K + E+D+WS G ILY LL G PPF + +I + + I+ A
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVA 269
Query: 261 KDLIRKMLERDPRRRISAHEVL 282
LIR+ML DP R S E+L
Sbjct: 270 SALIRRMLHADPTLRPSVAELL 291
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 15/256 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + + HP + +K ++
Sbjct: 18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQT 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GGELF + + ++E A IVS +E HS V++RD+K EN
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGV 217
+ D DG + TDFGL G + G+P Y+APEVL + YG +D W GV
Sbjct: 137 MLDKDG---HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
++Y ++ G PF+ + +F+ IL ++ F ++S AK L+ +L++DP++R+
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 278 -----AHEVLCHPWIV 288
A EV+ H + +
Sbjct: 250 GGPSDAKEVMEHRFFL 265
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 123/262 (46%), Gaps = 10/262 (3%)
Query: 23 PRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMH 82
PR Y F Y T FA K +PK LL + + EI I H
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-H 96
Query: 83 HLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVE 142
++P+VV G +ED FV++V+E+C L + + +E EA ++ + V+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 143 GCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEV 201
H+ V+HRDLK N + DD + DFGL+ + G+ + G+P Y+APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEV 213
Query: 202 LLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
L K + E+D+WS G ILY LL G PPF + +I + + I+ A
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVA 269
Query: 261 KDLIRKMLERDPRRRISAHEVL 282
LIR+ML DP R S E+L
Sbjct: 270 SALIRRMLHADPTLRPSVAELL 291
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWR-EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMEL 109
T +A K + K ++ + + R E Q++ H+ + P +V + ++ +HL+++
Sbjct: 81 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDY 140
Query: 110 CAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAK 169
GGELF + + ++E E + IV +E H LG+++RD+K EN L D++G
Sbjct: 141 INGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG---H 197
Query: 170 LMATDFGLSVFY--KPGQYLSDVVGSPYYVAPEVLL---KHYGPEIDVWSAGVILYILLS 224
++ TDFGLS + + D G+ Y+AP+++ + +D WS GV++Y LL+
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 225 GVPPFWAETESGIFKQILQGKLDFESDPWPS-ISDSAKDLIRKMLERDPRRRISAHEVLC 283
G PF + E +I + L E P+P +S AKDLI+++L +DP++R+ C
Sbjct: 258 GASPFTVDGEKNSQAEISRRILKSEP-PYPQEMSALAKDLIQRLLMKDPKKRLG-----C 311
Query: 284 HPWIVDD 290
P D+
Sbjct: 312 GPRDADE 318
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 16/253 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + S HP + +K +++
Sbjct: 164 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQT 222
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
+ VME GGELF + + +SE A IVS ++ HS V++RDLK EN
Sbjct: 223 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 282
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAG 216
+ D DG + TDFGL K G + G+P Y+APEVL + YG +D W G
Sbjct: 283 LMLDKDGH---IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 339
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
V++Y ++ G PF+ + +F+ IL ++ F ++ AK L+ +L++DP++R+
Sbjct: 340 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 395
Query: 277 S-----AHEVLCH 284
A E++ H
Sbjct: 396 GGGSEDAKEIMQH 408
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 16/253 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + S HP + +K +++
Sbjct: 161 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQT 219
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
+ VME GGELF + + +SE A IVS ++ HS V++RDLK EN
Sbjct: 220 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 279
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAG 216
+ D DG + TDFGL K G + G+P Y+APEVL + YG +D W G
Sbjct: 280 LMLDKDGH---IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 336
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
V++Y ++ G PF+ + +F+ IL ++ F ++ AK L+ +L++DP++R+
Sbjct: 337 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 392
Query: 277 S-----AHEVLCH 284
A E++ H
Sbjct: 393 GGGSEDAKEIMQH 405
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 16/257 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + S HP + +K +++
Sbjct: 22 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQT 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
+ VME GGELF + + +SE A IVS ++ HS V++RDLK EN
Sbjct: 81 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 140
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAG 216
+ D DG + TDFGL K G + G+P Y+APEVL + YG +D W G
Sbjct: 141 LMLDKDG---HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
V++Y ++ G PF+ + +F+ IL ++ F ++ AK L+ +L++DP++R+
Sbjct: 198 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 253
Query: 277 S-----AHEVLCHPWIV 288
A E++ H +
Sbjct: 254 GGGSEDAKEIMQHRFFA 270
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 16/257 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + S HP + +K +++
Sbjct: 23 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQT 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
+ VME GGELF + + +SE A IVS ++ HS V++RDLK EN
Sbjct: 82 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 141
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAG 216
+ D DG + TDFGL K G + G+P Y+APEVL + YG +D W G
Sbjct: 142 LMLDKDG---HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 198
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
V++Y ++ G PF+ + +F+ IL ++ F ++ AK L+ +L++DP++R+
Sbjct: 199 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 254
Query: 277 S-----AHEVLCHPWIV 288
A E++ H +
Sbjct: 255 GGGSEDAKEIMQHRFFA 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 16/257 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T ++A K + K ++ +++ E +++ + S HP + +K +++
Sbjct: 21 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQT 79
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
+ VME GGELF + + +SE A IVS ++ HS V++RDLK EN
Sbjct: 80 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 139
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAG 216
+ D DG + TDFGL K G + G+P Y+APEVL + YG +D W G
Sbjct: 140 LMLDKDG---HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 196
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
V++Y ++ G PF+ + +F+ IL ++ F ++ AK L+ +L++DP++R+
Sbjct: 197 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRL 252
Query: 277 S-----AHEVLCHPWIV 288
A E++ H +
Sbjct: 253 GGGSEDAKEIMQHRFFA 269
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 108/179 (60%), Gaps = 10/179 (5%)
Query: 298 LDSAVLSRLKHFCAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKV 357
L S +L LK+F N+LKK+AL +IA+ L + EI L+ +F +D D SGT++ +E+
Sbjct: 22 LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 358 GLKRVGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRD 417
GLK++G Q + +I ++ D + +G I Y +F+AAT+ ++E + F FFD D
Sbjct: 82 GLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDID 141
Query: 418 GSGYITIDELQQACKEFGLGEV-------PLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
G+G I+++EL++ FG ++ +D +++E+D + DG ID+ EF MM + +
Sbjct: 142 GNGKISVEELKRI---FGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKKK 197
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 125/250 (50%), Gaps = 12/250 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG +L K TN FA K++ K +L +D + E +++ EHP + + T++
Sbjct: 31 FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT 90
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GG+L I + + A I+ ++ HS G+++RDLK +N
Sbjct: 91 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 150
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGV 217
L D DG + DFG+ G ++ G+P Y+APE+LL + Y +D WS GV
Sbjct: 151 LLDKDG---HIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGV 207
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDP-WPSISDSAKDLIRKMLERDPRRRI 276
+LY +L G PF + E +F I ++D P W + AKDL+ K+ R+P +R+
Sbjct: 208 LLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKDLLVKLFVREPEKRL 262
Query: 277 SAH-EVLCHP 285
++ HP
Sbjct: 263 GVRGDIRQHP 272
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 125/250 (50%), Gaps = 12/250 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG +L K TN FA K++ K +L +D + E +++ EHP + + T++
Sbjct: 30 FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT 89
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ VME GG+L I + + A I+ ++ HS G+++RDLK +N
Sbjct: 90 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 149
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSPYYVAPEVLL-KHYGPEIDVWSAGV 217
L D DG + DFG+ G ++ G+P Y+APE+LL + Y +D WS GV
Sbjct: 150 LLDKDG---HIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGV 206
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDP-WPSISDSAKDLIRKMLERDPRRRI 276
+LY +L G PF + E +F I ++D P W + AKDL+ K+ R+P +R+
Sbjct: 207 LLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKDLLVKLFVREPEKRL 261
Query: 277 SAH-EVLCHP 285
++ HP
Sbjct: 262 GVRGDIRQHP 271
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 18 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 73
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 74 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 133
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 134 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 191 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 249
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 250 ARITIPDIKKDRW 262
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 19 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRR 74
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 135 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 250
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 251 ARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 14/253 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
+G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G
Sbjct: 20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINAMLN-HENVVKFYGHRR 75
Query: 99 DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ +L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVW 213
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVW
Sbjct: 136 LLLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPS 251
Query: 274 RRISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 ARITIPDIKKDRW 264
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T FA K +PK LL + + EI I L+ H +VV G +ED+ FV +V+ELC
Sbjct: 41 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC 99
Query: 111 AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL 170
L + + +E EA ++ IV + H V+HRDLK N + +D ++
Sbjct: 100 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV 156
Query: 171 MATDFGLS--VFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
DFGL+ V Y G+ + G+P Y+APEVL K + E+DVWS G I+Y LL G P
Sbjct: 157 KIGDFGLATKVEYD-GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
PF + +I + + I+ A LI+KML+ DP R + +E+L
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T FA K +PK LL + + EI I L+ H +VV G +ED+ FV +V+ELC
Sbjct: 41 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC 99
Query: 111 AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL 170
L + + +E EA ++ IV + H V+HRDLK N + +D ++
Sbjct: 100 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV 156
Query: 171 MATDFGLS--VFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
DFGL+ V Y G+ + G+P Y+APEVL K + E+DVWS G I+Y LL G P
Sbjct: 157 KIGDFGLATKVEYD-GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
PF + +I + + I+ A LI+KML+ DP R + +E+L
Sbjct: 216 PFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T FA K +PK LL + + EI I L+ H +VV G +ED+ FV +V+ELC
Sbjct: 45 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC 103
Query: 111 AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL 170
L + + +E EA ++ IV + H V+HRDLK N + +D ++
Sbjct: 104 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV 160
Query: 171 MATDFGLS--VFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
DFGL+ V Y G+ + G+P Y+APEVL K + E+DVWS G I+Y LL G P
Sbjct: 161 KIGDFGLATKVEYD-GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
PF + +I + + I+ A LI+KML+ DP R + +E+L
Sbjct: 220 PFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELL 270
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 14/252 (5%)
Query: 41 GTTYLCIHKTTNAHFACKSIP-KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
G L +++ T A K + KR + C E+ + +EI I L+ H NVV+ G +
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLN-HENVVKFYGHRRE 75
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+L +E C+GGELFDRI E +A + +++ V H +G+ HRD+KPEN
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPG---QYLSDVVGSPYYVAPEVLLKH--YGPEIDVWS 214
L D + D+ K+ +DFGL+ ++ + L+ + G+ YVAPE+L + + +DVWS
Sbjct: 136 LLD-ERDNLKI--SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 215 AGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRR 274
G++L +L+G P+ ++S + K + +PW I + L+ K+L +P
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPSA 251
Query: 275 RISAHEVLCHPW 286
RI+ ++ W
Sbjct: 252 RITIPDIKKDRW 263
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 23/256 (8%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G L K + A K + RK RE ++ E+ IM +H NVV++ +Y
Sbjct: 59 GIVCLAREKHSGRQVAVKMMDLRKQQRREL---LFNEVVIMRDY-QHFNVVEMYKSYLVG 114
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ ++ME GG L D IV++ +E + A + + ++ + H+ GV+HRD+K ++ L
Sbjct: 115 EELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSIL 173
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APEV+ + Y E+D+WS G++
Sbjct: 174 LTLDG---RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK------DLIRKMLERDP 272
+ ++ G PP+++++ K++ P P + +S K D + +ML RDP
Sbjct: 231 VIEMVDGEPPYFSDSPVQAMKRL-------RDSPPPKLKNSHKVSPVLRDFLERMLVRDP 283
Query: 273 RRRISAHEVLCHPWIV 288
+ R +A E+L HP+++
Sbjct: 284 QERATAQELLDHPFLL 299
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T FA K +PK LL + + EI I L+ H +VV G +ED+ FV +V+ELC
Sbjct: 63 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC 121
Query: 111 AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL 170
L + + +E EA ++ IV + H V+HRDLK N + +D ++
Sbjct: 122 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV 178
Query: 171 MATDFGLS--VFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
DFGL+ V Y G+ + G+P Y+APEVL K + E+DVWS G I+Y LL G P
Sbjct: 179 KIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
PF + +I + + I+ A LI+KML+ DP R + +E+L
Sbjct: 238 PFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T FA K +PK LL + + EI I L+ H +VV G +ED+ FV +V+ELC
Sbjct: 65 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC 123
Query: 111 AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL 170
L + + +E EA ++ IV + H V+HRDLK N + +D ++
Sbjct: 124 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV 180
Query: 171 MATDFGLS--VFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
DFGL+ V Y G+ + G+P Y+APEVL K + E+DVWS G I+Y LL G P
Sbjct: 181 KIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
PF + +I + + I+ A LI+KML+ DP R + +E+L
Sbjct: 240 PFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELL 290
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G+T + T + ++ K L ++ + ++ E+ IM +H NVV++ +Y
Sbjct: 31 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVG 89
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + ++ + H+ GV+HRD+K ++ L
Sbjct: 90 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 148
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APE++ + YGPE+D+WS G++
Sbjct: 149 LTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 205
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E K I + L +S S K + ++L RDP +R +A
Sbjct: 206 VIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 264
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 265 AELLKHPFL 273
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G+T + T + ++ K L ++ + ++ E+ IM +H NVV++ +Y
Sbjct: 40 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVG 98
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + ++ + H+ GV+HRD+K ++ L
Sbjct: 99 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 157
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APE++ + YGPE+D+WS G++
Sbjct: 158 LTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 214
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E K I + L +S S K + ++L RDP +R +A
Sbjct: 215 VIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 273
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 274 AELLKHPFL 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G+T + T + ++ K L ++ + ++ E+ IM +H NVV++ +Y
Sbjct: 35 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVG 93
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + ++ + H+ GV+HRD+K ++ L
Sbjct: 94 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 152
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APE++ + YGPE+D+WS G++
Sbjct: 153 LTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 209
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E K I + L +S S K + ++L RDP +R +A
Sbjct: 210 VIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 268
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 269 AELLKHPFL 277
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 51 TNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELC 110
T FA K +PK LL + + EI I L+ H +VV G +ED+ FV +V+ELC
Sbjct: 39 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC 97
Query: 111 AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL 170
L + + +E EA ++ IV + H V+HRDLK N + +D ++
Sbjct: 98 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV 154
Query: 171 MATDFGLS--VFYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVP 227
DFGL+ V Y G+ + G+P Y+APEVL K + E+DVWS G I+Y LL G P
Sbjct: 155 KIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 228 PFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
PF + +I + + I+ A LI+KML+ DP R + +E+L
Sbjct: 214 PFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELL 264
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G+T + T + ++ K L ++ + ++ E+ IM +H NVV++ +Y
Sbjct: 85 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVG 143
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + ++ + H+ GV+HRD+K ++ L
Sbjct: 144 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 202
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APE++ + YGPE+D+WS G++
Sbjct: 203 LTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 259
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E K I + L +S S K + ++L RDP +R +A
Sbjct: 260 VIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 318
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 319 AELLKHPFL 327
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G+T + T + ++ K L ++ + ++ E+ IM +H NVV++ +Y
Sbjct: 162 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVG 220
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + ++ + H+ GV+HRD+K ++ L
Sbjct: 221 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 279
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APE++ + YGPE+D+WS G++
Sbjct: 280 LTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 336
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E K I + L +S S K + ++L RDP +R +A
Sbjct: 337 VIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 395
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 396 AELLKHPFL 404
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G+T + T + ++ K L ++ + ++ E+ IM +H NVV++ +Y
Sbjct: 42 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVG 100
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + ++ + H+ GV+HRD+K ++ L
Sbjct: 101 DELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 159
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
DG ++ +DFG K +VG+PY++APE++ + YGPE+D+WS G++
Sbjct: 160 LTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E K I + L +S S K + ++L RDP +R +A
Sbjct: 217 VIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 275
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 276 AELLKHPFL 284
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 16/287 (5%)
Query: 10 STKPANTVLPYQTPRLR-DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCR 68
S+K N + + RL D++ FG L K T +A K + K +L
Sbjct: 5 SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD 64
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+D + E +I+ HP + Q+ ++ + VME GG+L I + E
Sbjct: 65 DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA 124
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV-FYKPGQYL 187
A I+S + H G+++RDLK +N L D +G KL DFG+ G
Sbjct: 125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG-HCKL--ADFGMCKEGICNGVTT 181
Query: 188 SDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
+ G+P Y+APE+L + YGP +D W+ GV+LY +L G PF AE E +F+ IL ++
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241
Query: 247 DFESDPWPSISDSAKDLIRKMLERDPRRRISA------HEVLCHPWI 287
+ + W + + A +++ + ++P R+ + H +L HP+
Sbjct: 242 VYPT--W--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 41 GTTYLCIHKTTNAHFACKSI-----PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
GT Y + T A + + PK++L+ E I +M +++PN+V
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE--------ILVMRE-NKNPNIVNYLD 84
Query: 96 TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+Y + +VME AGG L D +V + E + A + + + +E HS V+HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL-KHYGPEIDVW 213
+N L DG KL TDFG P Q S +VG+PY++APEV+ K YGP++D+W
Sbjct: 144 SDNILLGMDGS-VKL--TDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++ ++ G PP+ E I +P +S +D + + LE D
Sbjct: 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLEMDVE 259
Query: 274 RRISAHEVLCHPWI 287
+R SA E+L H ++
Sbjct: 260 KRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 21/254 (8%)
Query: 41 GTTYLCIHKTTNAHFACKSI-----PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
GT Y + T A + + PK++L+ E I +M +++PN+V
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE--------ILVMRE-NKNPNIVNYLD 84
Query: 96 TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+Y + +VME AGG L D +V + E + A + + + +E HS V+HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL-KHYGPEIDVW 213
+N L DG KL TDFG P Q S++VG+PY++APEV+ K YGP++D+W
Sbjct: 144 SDNILLGMDGS-VKL--TDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++ ++ G PP+ E I +P +S +D + + L+ D
Sbjct: 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLDMDVE 259
Query: 274 RRISAHEVLCHPWI 287
+R SA E+L H ++
Sbjct: 260 KRGSAKELLQHQFL 273
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 22/254 (8%)
Query: 47 IHKTTNAH----FACKSIPKRKLLCR--EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
+ K T A+ FA K + K+ ++ R +D E I+ + +HP +V + ++
Sbjct: 36 VRKVTGANTGKIFAMKVL-KKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTG 93
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
++L++E +GGELF ++ +G + E A + I + H G+++RDLKPEN +
Sbjct: 94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIM 153
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVI 218
+ G + TDFGL G G+ Y+APE+L++ + +D WS G +
Sbjct: 154 LNHQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGAL 210
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS- 277
+Y +L+G PPF E +IL+ KL+ P ++ A+DL++K+L+R+ R+
Sbjct: 211 MYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGA 266
Query: 278 ----AHEVLCHPWI 287
A EV HP+
Sbjct: 267 GPGDAGEVQAHPFF 280
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 22/254 (8%)
Query: 47 IHKTTNAH----FACKSIPKRKLLCR--EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
+ K T A+ FA K + K+ ++ R +D E I+ + +HP +V + ++
Sbjct: 36 VRKVTGANTGKIFAMKVL-KKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTG 93
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
++L++E +GGELF ++ +G + E A + I + H G+++RDLKPEN +
Sbjct: 94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIM 153
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVI 218
+ G + TDFGL G G+ Y+APE+L++ + +D WS G +
Sbjct: 154 LNHQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGAL 210
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS- 277
+Y +L+G PPF E +IL+ KL+ P ++ A+DL++K+L+R+ R+
Sbjct: 211 MYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGA 266
Query: 278 ----AHEVLCHPWI 287
A EV HP+
Sbjct: 267 GPGDAGEVQAHPFF 280
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 41 GTTYLCIHKTTNAHFACKSI-----PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
GT Y + T A + + PK++L+ E I +M +++PN+V
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE--------ILVMRE-NKNPNIVNYLD 85
Query: 96 TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+Y + +VME AGG L D +V + E + A + + + +E HS V+HRD+K
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL-KHYGPEIDVW 213
+N L DG KL TDFG P Q S +VG+PY++APEV+ K YGP++D+W
Sbjct: 145 SDNILLGMDGS-VKL--TDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++ ++ G PP+ E I +P +S +D + + LE D
Sbjct: 202 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLEMDVE 260
Query: 274 RRISAHEVLCHPWI 287
+R SA E++ H ++
Sbjct: 261 KRGSAKELIQHQFL 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 41 GTTYLCIHKTTNAHFACKSI-----PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
GT Y + T A + + PK++L+ E I +M +++PN+V
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE--------ILVMRE-NKNPNIVNYLD 84
Query: 96 TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+Y + +VME AGG L D +V + E + A + + + +E HS V+HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL-KHYGPEIDVW 213
+N L DG KL TDFG P Q S +VG+PY++APEV+ K YGP++D+W
Sbjct: 144 SDNILLGMDGS-VKL--TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++ ++ G PP+ E I +P +S +D + + L+ D
Sbjct: 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLDMDVE 259
Query: 274 RRISAHEVLCHPWI 287
+R SA E+L H ++
Sbjct: 260 KRGSAKELLQHQFL 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 41 GTTYLCIHKTTNAHFACKSI-----PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
GT Y + T A + + PK++L+ E I +M +++PN+V
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE--------ILVMRE-NKNPNIVNYLD 85
Query: 96 TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+Y + +VME AGG L D +V + E + A + + + +E HS V+HR++K
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQY-LSDVVGSPYYVAPEVLL-KHYGPEIDVW 213
+N L DG KL TDFG P Q S +VG+PY++APEV+ K YGP++D+W
Sbjct: 145 SDNILLGMDGS-VKL--TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR 273
S G++ ++ G PP+ E I +P +S +D + + LE D
Sbjct: 202 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLEMDVE 260
Query: 274 RRISAHEVLCHPWI 287
+R SA E++ H ++
Sbjct: 261 KRGSAKELIQHQFL 274
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 37/263 (14%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G+ Y IHK T A K +P D ++ +EI IM + P+VV+ G+Y
Sbjct: 42 YGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQ-CDSPHVVKYYGSYFK 95
Query: 100 SVFVHLVMELCAGGELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
+ + +VME C G + D I + +E E A ++++ + +E H + +HRD+K N
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGN 155
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-------VVGSPYYVAPEVLLK-HYGPEI 210
L +T+G AKL DFG++ GQ L+D V+G+P+++APEV+ + Y
Sbjct: 156 ILLNTEG-HAKL--ADFGVA-----GQ-LTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSI------SDSAKDLI 264
D+WS G+ + G PP+ A+ ++ ++P P+ SD+ D +
Sbjct: 207 DIWSLGITAIEMAEGKPPY-ADIHP------MRAIFMIPTNPPPTFRKPELWSDNFTDFV 259
Query: 265 RKMLERDPRRRISAHEVLCHPWI 287
++ L + P +R +A ++L HP++
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFV 282
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 11/249 (4%)
Query: 41 GTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDS 100
G + K T A K + RK RE ++ E+ IM H NVV + +Y
Sbjct: 59 GIVCIATEKHTGKQVAVKKMDLRKQQRREL---LFNEVVIMRDY-HHDNVVDMYSSYLVG 114
Query: 101 VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFL 160
+ +VME GG L D IV +E + A + +++ + H+ GV+HRD+K ++ L
Sbjct: 115 DELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSIL 173
Query: 161 FDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVI 218
+DG ++ +DFG K +VG+PY++APEV+ + YG E+D+WS G++
Sbjct: 174 LTSDG---RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 230
Query: 219 LYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+ ++ G PP++ E ++I + L +S + + ML R+P +R +A
Sbjct: 231 VIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATA 289
Query: 279 HEVLCHPWI 287
E+L HP++
Sbjct: 290 QELLGHPFL 298
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
AE+L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLH-LNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTI++ EF++ + + + EE LI AF FDRDG+G I+ EL+ G L +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG I+Y EF MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 91/145 (62%), Gaps = 5/145 (3%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM-EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTI++ EF+ T+ KM + EE + AF FD+DG+G+I+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF TMM
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMM 143
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+G+I+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF TMM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T +A K + K ++ +D + E +++ L + P + Q+ ++
Sbjct: 32 FGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQT 91
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ VME GG+L I G + E +A I + H G+++RDLK +N
Sbjct: 92 VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNV 151
Query: 160 LFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVWSAGV 217
+ D++G + DFG+ + G + G+P Y+APE++ + YG +D W+ GV
Sbjct: 152 MLDSEG---HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGV 208
Query: 218 ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
+LY +L+G PPF E E +F+ I++ + + S+S A + + ++ + P +R+
Sbjct: 209 LLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKRLG 264
Query: 278 A 278
Sbjct: 265 C 265
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A+ L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLH-LNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTI++ EF++ + + + EE LI AF FDRDG+G I+ EL+ G L +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG I+Y EF MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 329 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 386
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 353 EELKVGLKRVGSQLMESEIK----ALMDAADIDNNGTIEYGEFIAATLHLNKMER-EENL 407
+E + K G+ +E+K L++ ++ G E G + L N ++ E
Sbjct: 216 QERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIGFKEDGNILGHKLEYNSRDQLTEEQ 275
Query: 408 IA----AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEF 461
IA AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 462 ATMM 465
TMM
Sbjct: 336 LTMM 339
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+G+I+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF TMM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 329 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 386
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 353 EELKVGLKRVGSQLMESEIK----ALMDAADIDNNGTIEYGEFIAATLHLNKMER-EENL 407
+E + K G+ +E+K L++ ++ G E G + L N ++ E
Sbjct: 216 QERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIGFKEDGNILGHKLEYNTRDQLTEEQ 275
Query: 408 IA----AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEF 461
IA AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 462 ATMM 465
TMM
Sbjct: 336 LTMM 339
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 364 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 421
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 363 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 326 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 383
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 384 EVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 363 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 363 TIDFPEFL--TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 322 VIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADID 381
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 382 NNGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--L 436
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 63 GNGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 120
Query: 437 GEVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 121 TDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 62 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 119
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 120 DEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+G+I+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF TMM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+G+I+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF TMM
Sbjct: 119 DEEVDEMIRESDIDGDGQVNYEEFVTMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+G+I+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF TMM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
DH+ FG + T +A K + K+K + R + +V++E+QIM L E
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-E 73
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HP +V + +++D + +V++L GG+L + H+ E I +V ++ +
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH- 205
++HRD+KP+N L D G + TDF ++ ++ + G+ Y+APE+
Sbjct: 134 QRIIHRDMKPDNILLDEHG---HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 206 ---YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESD--PWPSI-SDS 259
Y +D WS GV Y LL G P+ + + K+I+ FE+ +PS S
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHT---FETTVVTYPSAWSQE 246
Query: 260 AKDLIRKMLERDPRRRISA-HEVLCHPWIVD 289
L++K+LE +P +R S +V P++ D
Sbjct: 247 MVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 385 TIEYGEFIAATLH-LNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPL 441
TI++ EF+ + + EE + AF FD+DG+GYI+ EL+ G L + +
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 442 DEIVKEIDQDNDGRIDYGEFATMM 465
DE+++E D D DG+++Y EF MM
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 67 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 124
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 125 EEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 62 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTD 119
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +D++++E D D DG+++Y EF MM
Sbjct: 119 DEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+ ++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
+GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 360 DGTIDFPEFL--TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+ ++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
+GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L
Sbjct: 360 DGTIDFPEFL--TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+++Y EF MM
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 124/271 (45%), Gaps = 24/271 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD---VWREIQIMHHLSE---HPNVVQI 93
FGT + T A K IP+ ++L D E+ ++ + HP V+++
Sbjct: 44 FGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL 103
Query: 94 KGTYEDSVFVHLVMEL-CAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHR 152
+E LV+E +LFD I KG E + +V+ ++ CHS GV+HR
Sbjct: 104 LDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHR 163
Query: 153 DLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGPEI 210
D+K EN L D AKL+ DFG Y +D G+ Y PE + +H +
Sbjct: 164 DIKDENILIDLRRGCAKLI--DFGSGALLHDEPY-TDFDGTRVYSPPEWISRHQYHALPA 220
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLER 270
VWS G++LY ++ G PF + E IL+ +L F + +S LIR+ L
Sbjct: 221 TVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----HVSPDCCALIRRCLAP 270
Query: 271 DPRRRISAHEVLCHPWIVDDTVAPDKPLDSA 301
P R S E+L PW+ T A D PL+ +
Sbjct: 271 KPSSRPSLEEILLDPWM--QTPAEDVPLNPS 299
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D +G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 363 TIDFPEFL--TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D +G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 362 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+ L K T+ +A K + K + ED D V E + S HP +V + ++
Sbjct: 18 YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 77
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+E GG+L + + E A I + H G+++RDLK +N
Sbjct: 78 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 137
Query: 160 LFDTDGDDAKLMATDFGL-SVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGV 217
L D++G + TD+G+ +PG S G+P Y+APE+L + YG +D W+ GV
Sbjct: 138 LLDSEG---HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 218 ILYILLSGVPPF---------WAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+++ +++G PF TE +F+ IL+ ++ S+S A +++ L
Sbjct: 195 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 250
Query: 269 ERDPRRRISAHEVLCHP 285
+DP+ R+ CHP
Sbjct: 251 NKDPKERLG-----CHP 262
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D +G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 385 TIEYGEF-IAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPL 441
TI++ EF I + + EE + AF FD+DG+GYI+ EL+ G L + +
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 442 DEIVKEIDQDNDGRIDYGEFATMM 465
DE+++E D D DG+++Y EF MM
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+ L K T+ +A K + K + ED D V E + S HP +V + ++
Sbjct: 22 YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+E GG+L + + E A I + H G+++RDLK +N
Sbjct: 82 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 141
Query: 160 LFDTDGDDAKLMATDFGL-SVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGV 217
L D++G + TD+G+ +PG S G+P Y+APE+L + YG +D W+ GV
Sbjct: 142 LLDSEG---HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 218 ILYILLSGVPPF---------WAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+++ +++G PF TE +F+ IL+ ++ S+S A +++ L
Sbjct: 199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 254
Query: 269 ERDPRRRISAHEVLCHP 285
+DP+ R+ CHP
Sbjct: 255 NKDPKERLG-----CHP 266
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E + D DG+++Y EF MM
Sbjct: 119 EEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 126/249 (50%), Gaps = 16/249 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L + K I ++ +E ++ RE+ ++ ++ +HPN+VQ + ++E+
Sbjct: 37 FGKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLANM-KHPNIVQYRESFEE 94
Query: 100 SVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++VM+ C GG+LF RI A+ + E + I ++ H ++HRD+K +
Sbjct: 95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQ 154
Query: 158 NFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVWSA 215
N DG + DFG++ V + +G+PYY++PE+ K Y + D+W+
Sbjct: 155 NIFLTKDGT---VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWAL 211
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSI--SDSAKDLIRKMLERDPR 273
G +LY L + F A + + +I+ G S P S+ S + L+ ++ +R+PR
Sbjct: 212 GCVLYELCTLKHAFEAGSMKNLVLKIISG-----SFPPVSLHYSYDLRSLVSQLFKRNPR 266
Query: 274 RRISAHEVL 282
R S + +L
Sbjct: 267 DRPSVNSIL 275
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+ L K T+ +A + + K + ED D V E + S HP +V + ++
Sbjct: 65 YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 124
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+E GG+L + + E A I + H G+++RDLK +N
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGV 217
L D++G + TD+G+ +PG S G+P Y+APE+L + YG +D W+ GV
Sbjct: 185 LLDSEG---HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 218 ILYILLSGVPPF---------WAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+++ +++G PF TE +F+ IL+ ++ S+S A +++ L
Sbjct: 242 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 297
Query: 269 ERDPRRRISAHEVLCHP 285
+DP+ R+ CHP
Sbjct: 298 NKDPKERLG-----CHP 309
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 7/145 (4%)
Query: 326 RLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGT 385
+L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 386 IEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
I++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 118
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 7/145 (4%)
Query: 326 RLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGT 385
+L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 386 IEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
I++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 118
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 TIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 118
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF MM
Sbjct: 119 EVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 87/144 (60%), Gaps = 7/144 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 387 EYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPL 441
++ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L + +
Sbjct: 61 DFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 118
Query: 442 DEIVKEIDQDNDGRIDYGEFATMM 465
DE+++E D D DG+++Y EF MM
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMM 142
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 105/196 (53%), Gaps = 13/196 (6%)
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HP +V++ ++ ++L+++ GG+LF R+ + ++E + + + ++ HS
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSDVVGSPYYVAPEVLL 203
LG+++RDLKPEN L D +G + TDFGL S+ ++ Y G+ Y+APEV+
Sbjct: 146 LGIIYRDLKPENILLDEEGH---IKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVN 200
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
+ + D WS GV+++ +L+G PF + IL+ KL +S A+
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQS 256
Query: 263 LIRKMLERDPRRRISA 278
L+R + +R+P R+ A
Sbjct: 257 LLRMLFKRNPANRLGA 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 105/196 (53%), Gaps = 13/196 (6%)
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HP +V++ ++ ++L+++ GG+LF R+ + ++E + + + ++ HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSDVVGSPYYVAPEVLL 203
LG+++RDLKPEN L D +G + TDFGL S+ ++ Y G+ Y+APEV+
Sbjct: 145 LGIIYRDLKPENILLDEEGH---IKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVN 199
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
+ + D WS GV+++ +L+G PF + IL+ KL +S A+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQS 255
Query: 263 LIRKMLERDPRRRISA 278
L+R + +R+P R+ A
Sbjct: 256 LLRMLFKRNPANRLGA 271
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 105/196 (53%), Gaps = 13/196 (6%)
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHS 146
HP +V++ ++ ++L+++ GG+LF R+ + ++E + + + ++ HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSDVVGSPYYVAPEVLL 203
LG+++RDLKPEN L D +G + TDFGL S+ ++ Y G+ Y+APEV+
Sbjct: 145 LGIIYRDLKPENILLDEEGH---IKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVN 199
Query: 204 KH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKD 262
+ + D WS GV+++ +L+G PF + IL+ KL +S A+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQS 255
Query: 263 LIRKMLERDPRRRISA 278
L+R + +R+P R+ A
Sbjct: 256 LLRMLFKRNPANRLGA 271
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 28 HYXXXXXXXXXXFGTTYLC--IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS 85
H+ FG +L + + + H + K+ L D E I+ ++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 86 EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCH 145
HP VV++ ++ ++L+++ GG+LF R+ + ++E + + + ++ H
Sbjct: 89 -HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 146 SLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS---VFYKPGQYLSDVVGSPYYVAPEVL 202
SLG+++RDLKPEN L D +G + TDFGLS + ++ Y G+ Y+APEV+
Sbjct: 148 SLGIIYRDLKPENILLDEEG---HIKLTDFGLSKEAIDHEKKAY--SFCGTVEYMAPEVV 202
Query: 203 LKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK 261
+ + D WS GV+++ +L+G PF + IL+ KL +S A+
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQ 258
Query: 262 DLIRKMLERDPRRRISA 278
L+R + +R+P R+ +
Sbjct: 259 SLLRALFKRNPANRLGS 275
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 22/227 (9%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYED--SVFVHLVMELCAGGELFDRIVAKG-----HYSERE 129
E+ ++ L +HPN+V+ D + +++VME C GG+L ++ KG + E
Sbjct: 55 EVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 130 AAKLIKTIVSVVEGCHSLG-----VMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKP 183
+++ + ++ CH V+HRDLKP N D + KL DFGL+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKL--GDFGLARILNHD 169
Query: 184 GQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
+ + VG+PYY++PE + + Y + D+WS G +LY L + +PPF A ++ + +I
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 243 QGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+GK F P+ SD ++I +ML R S E+L +P I++
Sbjct: 230 EGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGTI+
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 388 YGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLD 442
+ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L + +D
Sbjct: 63 FPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 443 EIVKEIDQDNDGRIDYGEFATMM 465
E+++E D D DG+++Y EF MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 40/247 (16%)
Query: 67 CREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFD---RIVAKG 123
C+ D++ +EIQ M HPN+V ++ + LVM+L +GG + D IVAKG
Sbjct: 53 CQTSMDELLKEIQAMSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 111
Query: 124 HYS-----EREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+ E A +++ ++ +E H G +HRD+K N L G+D + DFG+S
Sbjct: 112 EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS 168
Query: 179 VFYKPG------QYLSDVVGSPYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFW 230
F G + VG+P ++APEV+ ++ Y + D+WS G+ L +G P+
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228
Query: 231 AETESGIFKQILQGKLDFESDPWPSISDSAKDL---------IRKM----LERDPRRRIS 277
+ LQ +DP PS+ +D RKM L++DP +R +
Sbjct: 229 KYPPMKVLMLTLQ------NDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
Query: 278 AHEVLCH 284
A E+L H
Sbjct: 282 AAELLRH 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYED--SVFVHLVMELCAGGELFDRIVAKG-----HYSERE 129
E+ ++ L +HPN+V+ D + +++VME C GG+L ++ KG + E
Sbjct: 55 EVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 130 AAKLIKTIVSVVEGCHSLG-----VMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKP 183
+++ + ++ CH V+HRDLKP N D + KL DFGL+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKL--GDFGLARILNHD 169
Query: 184 GQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
+ VG+PYY++PE + + Y + D+WS G +LY L + +PPF A ++ + +I
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 243 QGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+GK F P+ SD ++I +ML R S E+L +P I++
Sbjct: 230 EGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGTI+
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 388 YGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLD 442
+ EF+ T+ KM + EE + AF FD+DG+GYI+ EL+ G L + +D
Sbjct: 61 FPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 118
Query: 443 EIVKEIDQDNDGRIDYGEFATMM 465
E+++E D D DG+++Y EF MM
Sbjct: 119 EMIREADIDGDGQVNYEEFVQMM 141
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L++E+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ L KM + EE L AF FD+DG+G+I+ EL+ G L +
Sbjct: 61 GTIDFPEFL--NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 40/247 (16%)
Query: 67 CREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFD---RIVAKG 123
C+ D++ +EIQ M HPN+V ++ + LVM+L +GG + D IVAKG
Sbjct: 48 CQTSMDELLKEIQAMSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 106
Query: 124 HYS-----EREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+ E A +++ ++ +E H G +HRD+K N L G+D + DFG+S
Sbjct: 107 EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS 163
Query: 179 VFYKPG------QYLSDVVGSPYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFW 230
F G + VG+P ++APEV+ ++ Y + D+WS G+ L +G P+
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 223
Query: 231 AETESGIFKQILQGKLDFESDPWPSISDSAKD---------LIRKM----LERDPRRRIS 277
+ LQ +DP PS+ +D RKM L++DP +R +
Sbjct: 224 KYPPMKVLMLTLQ------NDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
Query: 278 AHEVLCH 284
A E+L H
Sbjct: 277 AAELLRH 283
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L++E+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGE 438
GTI++ EF+ L KM + EE L AF FD+DG+G+I+ EL+ G L +
Sbjct: 61 GTIDFPEFL--NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 118
Query: 439 VPLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D D DG+++Y EF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYED--SVFVHLVMELCAGGELFDRIVAKG-----HYSERE 129
E+ ++ L +HPN+V+ D + +++VME C GG+L ++ KG + E
Sbjct: 55 EVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 130 AAKLIKTIVSVVEGCHSLG-----VMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKP 183
+++ + ++ CH V+HRDLKP N D + KL DFGL+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKL--GDFGLARILNHD 169
Query: 184 GQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
+ VG+PYY++PE + + Y + D+WS G +LY L + +PPF A ++ + +I
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 243 QGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+GK F P+ SD ++I +ML R S E+L +P I++
Sbjct: 230 EGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+ L K T+ +A K + K + ED D V E + S HP +V + ++
Sbjct: 33 YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
+ V+E GG+L + + E A I + H G+++RDLK +N
Sbjct: 93 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 152
Query: 160 LFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGV 217
L D++G + TD+G+ +PG S G+P Y+APE+L + YG +D W+ GV
Sbjct: 153 LLDSEG---HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 218 ILYILLSGVPPF---------WAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+++ +++G PF TE +F+ IL+ ++ S+S A +++ L
Sbjct: 210 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKAASVLKSFL 265
Query: 269 ERDPRRRISA 278
+DP+ R+
Sbjct: 266 NKDPKERLGC 275
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 89/145 (61%), Gaps = 3/145 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+ ++E F + DTD SGTI +ELKV ++ +G + + EIK ++ D D +GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 387 EYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
++ EF+ T + + + E ++ AF FD D SG ITI +L++ KE G L E L E
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQS 468
++ E D+++D ID EF +M+++
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIMKKT 166
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + C K T +ACK + K++L R+ Y E +I+ + +V + +E
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLAYAFET 256
Query: 100 SVFVHLVMELCAGGELFDRIVA----KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ LVM + GG++ I + E A IVS +E H +++RDLK
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLK 316
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSPYYVAPEVLL-KHYGPEIDVW 213
PEN L D DG+ + +D GL+V K GQ + G+P ++APE+LL + Y +D +
Sbjct: 317 PENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP-SISDSAKDLIRKMLERDP 272
+ GV LY +++ PF A E K++ Q L+ ++ +P S ++KD +L++DP
Sbjct: 374 ALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKFSPASKDFCEALLQKDP 432
Query: 273 RRRISAHEVLC-----HPWIVD 289
+R+ + C HP D
Sbjct: 433 EKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + C K T +ACK + K++L R+ Y E +I+ + +V + +E
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLAYAFET 256
Query: 100 SVFVHLVMELCAGGELFDRIVA----KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ LVM + GG++ I + E A IVS +E H +++RDLK
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLK 316
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSPYYVAPEVLL-KHYGPEIDVW 213
PEN L D DG+ + +D GL+V K GQ + G+P ++APE+LL + Y +D +
Sbjct: 317 PENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP-SISDSAKDLIRKMLERDP 272
+ GV LY +++ PF A E K++ Q L+ ++ +P S ++KD +L++DP
Sbjct: 374 ALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKFSPASKDFCEALLQKDP 432
Query: 273 RRRISAHEVLC-----HPWIVD 289
+R+ + C HP D
Sbjct: 433 EKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + C K T +ACK + K++L R+ Y E +I+ + +V + +E
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLAYAFET 256
Query: 100 SVFVHLVMELCAGGELFDRIVA----KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ LVM + GG++ I + E A IVS +E H +++RDLK
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLK 316
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSPYYVAPEVLL-KHYGPEIDVW 213
PEN L D DG+ + +D GL+V K GQ + G+P ++APE+LL + Y +D +
Sbjct: 317 PENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP-SISDSAKDLIRKMLERDP 272
+ GV LY +++ PF A E K++ Q L+ ++ +P S ++KD +L++DP
Sbjct: 374 ALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKFSPASKDFCEALLQKDP 432
Query: 273 RRRISAHEVLC-----HPWIVD 289
+R+ + C HP D
Sbjct: 433 EKRLGFRDGSCDGLRTHPLFRD 454
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 51/253 (20%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM + +HPNVV +K G +D VF++LV+E E R A HY++ +
Sbjct: 81 RELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYR--ASRHYAKLK 135
Query: 130 AAK---LIK----TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK 182
LIK ++ + HS+G+ HRD+KP+N L D KL+ DFG +
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI--DFGSAKILI 193
Query: 183 PGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGI--- 237
G+ + S YY APE++ +Y ID+WS G ++ L+ G P F ESGI
Sbjct: 194 AGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG--ESGIDQL 251
Query: 238 -----------FKQILQGKLDFESDPWPSI-------------SDSAKDLIRKMLERDPR 273
+QI ++ +P I A DLI ++LE P
Sbjct: 252 VEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPS 311
Query: 274 RRISAHEVLCHPW 286
R++A E LCHP+
Sbjct: 312 ARLTAIEALCHPF 324
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 95.1 bits (235), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL + +G E+E++ ++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNK-MEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTI + EF+ K + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 441 LDEIVKEIDQDNDGRIDYGEF 461
+DE ++E D D DG+++Y EF
Sbjct: 121 VDEXIREADIDGDGQVNYEEF 141
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ +G +L + E+ + ADID +G +
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 388 YGEFI 392
Y EF+
Sbjct: 138 YEEFV 142
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + C K T +ACK + K++L R+ Y E +I+ + +V + +E
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLAYAFET 256
Query: 100 SVFVHLVMELCAGGELFDRIVA----KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ LVM + GG++ I + E A IVS +E H +++RDLK
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLK 316
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSPYYVAPEVLL-KHYGPEIDVW 213
PEN L D DG+ + +D GL+V K GQ + G+P ++APE+LL + Y +D +
Sbjct: 317 PENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 214 SAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP-SISDSAKDLIRKMLERDP 272
+ GV LY +++ PF A E K++ Q L+ ++ +P S ++KD +L++DP
Sbjct: 374 ALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKFSPASKDFCEALLQKDP 432
Query: 273 RRRISAHEVLC-----HPWIVD 289
+R+ + C HP D
Sbjct: 433 EKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVW----------REIQIMHHLSEHPN 89
FG + + K N K I K K+L +D W EI I+ + EH N
Sbjct: 37 FGFVWTAVDKEKNKEVVVKFIKKEKVL-----EDCWIEDPKLGKVTLEIAILSRV-EHAN 90
Query: 90 VVQIKGTYEDSVFVHLVMELCAGG-ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG 148
++++ +E+ F LVME G +LF I E A+ + + +VS V
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHY 206
++HRD+K EN + +D + DFG + + + G+ G+ Y APEVL+ +
Sbjct: 151 IIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYR 207
Query: 207 GPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRK 266
GPE+++WS GV LY L+ PF E E + I P +S L+
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HPPYLVSKELMSLVSG 257
Query: 267 MLERDPRRRISAHEVLCHPWI 287
+L+ P RR + +++ PW+
Sbjct: 258 LLQPVPERRTTLEKLVTDPWV 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 123/242 (50%), Gaps = 20/242 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + K + FA K + K ++L R + +RE + + + + + ++D
Sbjct: 87 FGEVAVVKLKNADKVFAMKILNKWEMLKRAE-TACFREERDVLVNGDSKWITTLHYAFQD 145
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKL-IKTIVSVVEGCHSLGVMHRDLKPEN 158
++LVM+ GG+L + E A+ + +V ++ H L +HRD+KP+N
Sbjct: 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN 205
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVLLK------HYGPEI 210
L D +G + DFG + + G S V VG+P Y++PE+L YGPE
Sbjct: 206 ILMDMNG---HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC 262
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPS----ISDSAKDLIRK 266
D WS GV +Y +L G PF+AE+ + +I+ K F+ +P+ +S++AKDLIR+
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVTDVSENAKDLIRR 319
Query: 267 ML 268
++
Sbjct: 320 LI 321
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGT--Y 97
FG Y +K T+ A K I + E+ +D EI I+ +HPN+V++ Y
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHPNIVKLLDAFYY 105
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
E+++++ ++E CAGG + D ++ + +E + + K + + H ++HRDLK
Sbjct: 106 ENNLWI--LIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 156 PENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL------KHYGP 208
N LF DGD + DFG+S + Q +G+PY++APEV++ + Y
Sbjct: 163 AGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+ DVWS G+ L + PP + +I + + + P S + KD ++K L
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 278
Query: 269 ERDPRRRISAHEVLCHPWIVDDTVAPDKPL 298
E++ R + ++L HP++ D+ P + L
Sbjct: 279 EKNVDARWTTSQLLQHPFVTVDSNKPIREL 308
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSE--REAAKL 133
RE+Q++ EHPNV++ T +D F ++ +ELCA V + ++ E L
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA--TLQEYVEQKDFAHLGLEPITL 123
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKL--MATDFGLSVFYKPGQY----L 187
++ S + HSL ++HRDLKP N L K+ M +DFGL G++
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 188 SDVVGSPYYVAPEVLLKHYGPE----IDVWSAGVILYILLS-GVPPFWAETESGIFKQIL 242
S V G+ ++APE+L + +D++SAG + Y ++S G PF + IL
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANIL 241
Query: 243 QGKLDFES-DPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
G + P A++LI KM+ DP++R SA VL HP+
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGT--Y 97
FG Y +K T+ A K I + E+ +D EI I+ +HPN+V++ Y
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHPNIVKLLDAFYY 105
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
E+++++ ++E CAGG + D ++ + +E + + K + + H ++HRDLK
Sbjct: 106 ENNLWI--LIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 156 PENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL------KHYGP 208
N LF DGD + DFG+S + Q +G+PY++APEV++ + Y
Sbjct: 163 AGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+ DVWS G+ L + PP + +I + + + P S + KD ++K L
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 278
Query: 269 ERDPRRRISAHEVLCHPWIVDDTVAPDKPL 298
E++ R + ++L HP++ D+ P + L
Sbjct: 279 EKNVDARWTTSQLLQHPFVTVDSNKPIREL 308
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTY--EDSVFVHLVMELCAGG--ELFDRIVAKGHYSER 128
+V +EIQ++ L H NV+Q+ E+ +++VME C G E+ D + K +
Sbjct: 52 NVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVC 109
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+A ++ +E HS G++H+D+KP N L T G L + G++ P + +
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG---TLKISALGVAEALHP--FAA 164
Query: 189 DVV-----GSPYYVAPEV---LLKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQ 240
D GSP + PE+ L G ++D+WSAGV LY + +G+ PF + +F+
Sbjct: 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN 224
Query: 241 ILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
I +G D P +S DL++ MLE +P +R S ++ H W
Sbjct: 225 IGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGT--Y 97
FG Y +K T+ A K I + E+ +D EI I+ +HPN+V++ Y
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHPNIVKLLDAFYY 105
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
E+++++ ++E CAGG + D ++ + +E + + K + + H ++HRDLK
Sbjct: 106 ENNLWI--LIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 156 PENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL------KHYGP 208
N LF DGD + DFG+S + Q +G+PY++APEV++ + Y
Sbjct: 163 AGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
+ DVWS G+ L + PP + +I + + + P S + KD ++K L
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 278
Query: 269 ERDPRRRISAHEVLCHPWIVDDTVAPDKPL 298
E++ R + ++L HP++ D+ P + L
Sbjct: 279 EKNVDARWTTSQLLQHPFVTVDSNKPIREL 308
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 20/248 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + K T +A K + K ++L R + +RE + + + + + ++D
Sbjct: 103 FGEVAVVKMKNTERIYAMKILNKWEMLKRAE-TACFREERDVLVNGDCQWITALHYAFQD 161
Query: 100 SVFVHLVMELCAGGELFDRIVA-KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
++LVM+ GG+L + + E A I +V ++ H L +HRD+KP+N
Sbjct: 162 ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN 221
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVL------LKHYGPEI 210
L D +G + DFG + G S V VG+P Y++PE+L + YGPE
Sbjct: 222 VLLDVNG---HIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 278
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPS----ISDSAKDLIRK 266
D WS GV +Y +L G PF+AE+ + +I+ + F+ +PS +S+ AKDLI++
Sbjct: 279 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSEEAKDLIQR 335
Query: 267 MLERDPRR 274
++ RR
Sbjct: 336 LICSRERR 343
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L++E+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 387 EYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPL 441
++ EF+ L KM + EE L AF FD+DG+G+I+ EL+ G L + +
Sbjct: 61 DFPEFL--NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 118
Query: 442 DEIVKEIDQDNDGRIDYGEFATMM 465
DE+++E D D DG+++Y EF +M
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQVM 142
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 20/248 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + K T +A K + K ++L R + +RE + + + + + ++D
Sbjct: 87 FGEVAVVKMKNTERIYAMKILNKWEMLKRAE-TACFREERDVLVNGDCQWITALHYAFQD 145
Query: 100 SVFVHLVMELCAGGELFDRIVA-KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPEN 158
++LVM+ GG+L + + E A I +V ++ H L +HRD+KP+N
Sbjct: 146 ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN 205
Query: 159 FLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDV-VGSPYYVAPEVL------LKHYGPEI 210
L D +G + DFG + G S V VG+P Y++PE+L + YGPE
Sbjct: 206 VLLDVNG---HIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 262
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPS----ISDSAKDLIRK 266
D WS GV +Y +L G PF+AE+ + +I+ + F+ +PS +S+ AKDLI++
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSEEAKDLIQR 319
Query: 267 MLERDPRR 274
++ RR
Sbjct: 320 LICSRERR 327
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NGTI+
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 388 YGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIV 445
+ EF+ K E + AF FD+DG+GYI+ EL+ G L + +DE++
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 446 KEIDQDNDGRIDYGEFATMM 465
+E + D DG+++Y EF MM
Sbjct: 121 REANIDGDGQVNYEEFVQMM 140
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 320 LRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
L ++A ++ + + ++E F++ D D +G I+ EL+ + +G +L + E+ ++ A+
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 380 IDNNGTIEYGEFI 392
ID +G + Y EF+
Sbjct: 125 IDGDGQVNYEEFV 137
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 52/288 (18%)
Query: 43 TYLCIHKTTNAH---FACKSIPKRKLLCREDY---DDVWREIQIMHHLSEHPNVVQIKGT 96
TY ++K N + FA K I L +ED REI I+ L +H N+V++
Sbjct: 14 TYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKEL-KHSNIVKLYDV 68
Query: 97 YEDS-----VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMH 151
VF HL +L +L D V +G A + +++ + CH V+H
Sbjct: 69 IHTKKRLVLVFEHLDQDL---KKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGP 208
RDLKP+N L + +G+ L DFGL+ F P + + V + +Y AP+VL+ K Y
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------------GKLD----- 247
ID+WS G I +++G P F +E+ +I + K D
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 248 FESDPWPS----ISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
+E PW S + +S DL+ KML+ DP +RI+A + L H + ++
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 52/288 (18%)
Query: 43 TYLCIHKTTNAH---FACKSIPKRKLLCREDY---DDVWREIQIMHHLSEHPNVVQIKGT 96
TY ++K N + FA K I L +ED REI I+ L +H N+V++
Sbjct: 14 TYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKEL-KHSNIVKLYDV 68
Query: 97 YEDS-----VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMH 151
VF HL +L +L D V +G A + +++ + CH V+H
Sbjct: 69 IHTKKRLVLVFEHLDQDL---KKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGP 208
RDLKP+N L + +G+ L DFGL+ F P + + V + +Y AP+VL+ K Y
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------------GKLD----- 247
ID+WS G I +++G P F +E+ +I + K D
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 248 FESDPWPS----ISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
+E PW S + +S DL+ KML+ DP +RI+A + L H + ++
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 14/282 (4%)
Query: 4 QSSGSGSTKPANTVLPYQTPRLRDH-----YXXXXXXXXXXFGTTYLCIHKTTNAHFACK 58
Q + + K ANT+ + RD + FG L K T+ +A K
Sbjct: 313 QGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVK 372
Query: 59 SIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDR 118
+ K ++ +D + E +++ + P + Q+ ++ ++ VME GG+L
Sbjct: 373 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYH 432
Query: 119 IVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
I G + E A I + S G+++RDLK +N + D++G + DFG+
Sbjct: 433 IQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG---HIKIADFGMC 489
Query: 179 V-FYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G G+P Y+APE++ + YG +D W+ GV+LY +L+G PF E E
Sbjct: 490 KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
Query: 237 IFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
+F+ I++ + + S+S A + + ++ + P +R+
Sbjct: 550 LFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGC 587
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 52/288 (18%)
Query: 43 TYLCIHKTTNAH---FACKSIPKRKLLCREDY---DDVWREIQIMHHLSEHPNVVQIKGT 96
TY ++K N + FA K I L +ED REI I+ L +H N+V++
Sbjct: 14 TYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKEL-KHSNIVKLYDV 68
Query: 97 YEDS-----VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMH 151
VF HL +L +L D V +G A + +++ + CH V+H
Sbjct: 69 IHTKKRLVLVFEHLDQDL---KKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGP 208
RDLKP+N L + +G+ L DFGL+ F P + + + + +Y AP+VL+ K Y
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------------GKLD----- 247
ID+WS G I +++G P F +E+ +I + K D
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 248 FESDPWPS----ISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
+E PW S + +S DL+ KML+ DP +RI+A + L H + ++
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 13/243 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG L K T+ +A K + K ++ +D + E +++ + P + Q+ ++
Sbjct: 33 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
++ VME GG+L I G + E A I + S G+++RDLK +N
Sbjct: 93 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV 152
Query: 160 LFDTDGDDAKLMATDFGL---SVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVWSA 215
+ D++G + DFG+ +++ G G+P Y+APE++ + YG +D W+
Sbjct: 153 MLDSEG---HIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
GV+LY +L+G PF E E +F+ I++ + + S+S A + + ++ + P +R
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKR 263
Query: 276 ISA 278
+
Sbjct: 264 LGC 266
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGT--Y 97
FG Y +K T+ A K I + E+ +D EI I+ +HPN+V++ Y
Sbjct: 23 FGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHPNIVKLLDAFYY 78
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
E+++++ ++E CAGG + D ++ + +E + + K + + H ++HRDLK
Sbjct: 79 ENNLWI--LIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 156 PENFLFDTDGDDAKLMATDFGLSVFYKPG--QYLSDVVGSPYYVAPEVLL------KHYG 207
N LF DGD + DFG+S Q +G+PY++APEV++ + Y
Sbjct: 136 AGNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 208 PEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKM 267
+ DVWS G+ L + PP + +I + + + P S + KD ++K
Sbjct: 193 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKC 251
Query: 268 LERDPRRRISAHEVLCHPWIVDDTVAPDKPL 298
LE++ R + ++L HP++ D+ P + L
Sbjct: 252 LEKNVDARWTTSQLLQHPFVTVDSNKPIREL 282
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 15/183 (8%)
Query: 297 PLDSAVLSRLKHFCAMNKLKKMALRVIAERL-SEEEIGGLKELFKMIDTDESGTITFEEL 355
P + + ++ F KL + AL +A +L S+EE L ++F+ ID + G + +EL
Sbjct: 26 PSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL 85
Query: 356 KVGLKRVGSQ--------LMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENL 407
G ++ + +ESE+ A++ AAD D NG I+Y EF+ + + ++ L
Sbjct: 86 IDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKL 145
Query: 408 IAAFSFFDRDGSGYITIDELQQACKEFGLGEV---PLDEIVKEIDQDNDGRIDYGEFATM 464
+AF FD+DG+G I++DEL FGL + E++ ID +NDG +D+ EF M
Sbjct: 146 ESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKM 202
Query: 465 MRQ 467
+++
Sbjct: 203 IQK 205
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL + +G E+E++ ++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNK-MEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTI++ EF+ K + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 441 LDEIVKEIDQDNDGRIDYGEF 461
+DE ++E D D DG+++Y EF
Sbjct: 121 VDEXIREADIDGDGQVNYEEF 141
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFAT 463
AFS FD+DG G IT EL + G E L + + E+D D +G ID+ EF T
Sbjct: 15 AFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ +G +L + E+ + ADID +G +
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 388 YGEFI 392
Y EF+
Sbjct: 138 YEEFV 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L+E++I KE F + D D G IT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ L KM + EE L AF FD+D +G+I+ EL+ G L
Sbjct: 61 NGTIDFPEFL--NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+I+Y EF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V+LV L G +L+ +++ H S
Sbjct: 90 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHI 146
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGF 203
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 262
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 323 EVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 18/183 (9%)
Query: 300 SAVLSRLKHFCAMNKLKKMALRVIAERLSE-EEIGGLKELFKMIDTDESGTITFEELKVG 358
+ L +K F + KL + A+ + +L+ EE L ++F+ +D + G + +EL G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 359 LKRV-----------GSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENL 407
+++ S +E+E+ ++ + D D NG IEY EF+ + + E L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 408 IAAFSFFDRDGSGYITIDELQQACKEFGLGEV---PLDEIVKEIDQDNDGRIDYGEFATM 464
+AAF FD DGSG IT +EL + FG+ EV ++++E D++NDG +D+ EF M
Sbjct: 126 LAAFQQFDSDGSGKITNEELGRL---FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 465 MRQ 467
M++
Sbjct: 183 MQK 185
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL + +G E+E++ ++ D D N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 384 GTIEYGEFIAATLHLNK-MEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTI++ EF+ K + EE + AF FD+DG+GYI+ EL+ G L +
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 441 LDEIVKEIDQDNDGRIDYGEF 461
+D+ ++E D D DG+++Y EF
Sbjct: 122 VDQXIREADIDGDGQVNYEEF 142
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFAT 463
AFS FD+DG G IT EL + G E L + + E+D D +G ID+ EF T
Sbjct: 16 AFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ +G +L + E+ + ADID +G +
Sbjct: 82 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVN 138
Query: 388 YGEFI 392
Y EF+
Sbjct: 139 YEEFV 143
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A+ LSEE+I KE F + D D G IT EEL ++ + E E++ ++ D D N
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 384 GTIEYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GTIE+ EF++ + + EE L AF FD+D +GYI+ EL+ G L +
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+++++KE D D DG+++Y EF MM
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMM 145
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 127/289 (43%), Gaps = 57/289 (19%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDV-----WREIQIMHHLSEHPNVVQIK 94
+G + C ++ T A K K L ED D V REI+++ L +HPN+V +
Sbjct: 16 YGVVFKCRNRDTGQIVAIK-----KFLESED-DPVIKKIALREIRMLKQL-KHPNLVNLL 68
Query: 95 GTYEDSVFVHLVMELCAGGEL--FDRIVAKGHYSEREAAKLIKTI----VSVVEGCHSLG 148
+ +HLV E C L DR Y L+K+I + V CH
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDR------YQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KH 205
+HRD+KPEN L T KL DFG + + P Y D V + +Y +PE+L+
Sbjct: 123 CIHRDVKPENILI-TKHSVIKL--CDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIF--------------KQILQGKLDFES- 250
YGP +DVW+ G + LLSGVP + +++ +Q+ F
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 251 ---DP---------WPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
DP +P+IS A L++ L DP R++ ++L HP+
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 9/172 (5%)
Query: 302 VLSRLKHFCAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKR 361
VL K++ + K +K+A+ +IA++ ++ ++ LK F ++D D G IT E+LK GL++
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 362 VGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGY 421
G +L L+D D D +G I+Y EFIAA L ++ ++ + AF FD D G
Sbjct: 81 DGLKL-PYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKL-IYCAFRVFDVDNDGE 138
Query: 422 ITIDELQ----QACKEFGLGEVPLDEI---VKEIDQDNDGRIDYGEFATMMR 466
IT EL K+ + + ++ + ++++D++NDG+ID+ EF+ MM+
Sbjct: 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+A++L++++I KE F + D D G IT +EL ++ +G E+E++ +++ D D
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 383 NGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
NGTI++ EF+ L KM + EE L AF FD+D +G+I+ EL+ G L
Sbjct: 61 NGTIDFPEFL--NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+ +DE+++E D D DG+I+Y EF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE++ KE F + D D G IT EL ++ +G E+E++ +M D D N
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 384 GTIEYGEFIAATLH-LNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
GT+++ EF+ + + EE + AF FD+DG+G+++ EL+ G L +
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++ D D DG+++Y EF ++
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
AFS FD+DG G IT EL + G E L +++ EID+D +G +D+ EF MM
Sbjct: 15 AFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMM-- 72
Query: 468 SEGGVGKSRTMRNSLN-FNIADAFGVKD 494
+R M+++ N I +AF V D
Sbjct: 73 -------ARKMKDTDNEEEIREAFRVFD 93
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 21 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 77
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ + +LFD I +G E A ++ V CH+ GV+
Sbjct: 78 LLDWFERPDS-FVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 137 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 193
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 194 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 243
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQD 264
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 72 REIKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 128
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGF 185
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 244
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 245 ILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 305 EVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 72 REIKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 128
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 185
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 244
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 305 EVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 45/251 (17%)
Query: 76 REIQIMHHLS--EHPNVVQI----------KGTYEDSVFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ HL EHPNVV++ + T VF H+ +L D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPG 116
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E ++ ++ ++ HS V+HRDLKP+N L + G ++ DFGL+ Y
Sbjct: 117 VPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSF 172
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L+ VV + +Y APEVLL+ Y +D+WS G I + P F ++ +IL
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
Query: 243 QG-KLDFESDPWPS-----------------------ISDSAKDLIRKMLERDPRRRISA 278
L E D WP I + KDL+ K L +P +RISA
Sbjct: 233 DVIGLPGEED-WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Query: 279 HEVLCHPWIVD 289
+ L HP+ D
Sbjct: 292 YSALSHPYFQD 302
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 70 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 126
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGF 183
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 242
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 303 EVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 70 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 126
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGF 183
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 242
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 303 EVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 78 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 134
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 135 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 191
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 250
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 251 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 310
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 311 EVEQALAHPYLEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 70 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 126
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 183
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 242
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 303 EVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 70 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 126
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 183
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 242
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 303 EVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 70 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 126
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGF 183
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 242
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 303 EVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 68 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 124
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 181
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 240
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 241 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 301 EVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 72 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 128
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 185
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 244
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 305 EVEQALAHPYLEQYYDPSDEPIAEA 329
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 45/251 (17%)
Query: 76 REIQIMHHLS--EHPNVVQI----------KGTYEDSVFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ HL EHPNVV++ + T VF H+ +L D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPG 116
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E ++ ++ ++ HS V+HRDLKP+N L + G ++ DFGL+ Y
Sbjct: 117 VPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSF 172
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L+ VV + +Y APEVLL+ Y +D+WS G I + P F ++ +IL
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
Query: 243 QG-KLDFESDPWPS-----------------------ISDSAKDLIRKMLERDPRRRISA 278
L E D WP I + KDL+ K L +P +RISA
Sbjct: 233 DVIGLPGEED-WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Query: 279 HEVLCHPWIVD 289
+ L HP+ D
Sbjct: 292 YSALSHPYFQD 302
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 75 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 131
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 188
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 247
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 248 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 307
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 308 EVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 74 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 130
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGF 187
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 246
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 307 EVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 76 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 132
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 133 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 189
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 248
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 249 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 308
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 309 EVEQALAHPYLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 67 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 123
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 124 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 180
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 239
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 240 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 299
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 300 EVEQALAHPYLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 74 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 130
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 187
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 246
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 307 EVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 74 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 130
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 187
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 246
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 307 EVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 74 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 130
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGF 187
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 246
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 307 EVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 22 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 79 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 138 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 194
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 195 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 244
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQD 265
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
+ L+EE+I KE F + D D +G+I+ EL ++ +G E+E+ LM+ D+D N
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 384 GTIEYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
IE+ EF+A + L + E+ L+ AF FD++G G I+ EL+ G L +
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMMRQSEGGVGKSRTMRNSL 482
+D++++E+ D G I+ +FA ++ + + + +RN +
Sbjct: 122 VDDMLREV-SDGSGEINIQQFAALLSKGSSTGTRRKALRNKI 162
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 64 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 120
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 121 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 180 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 236
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 286
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 287 ALRPSDRPTFEEIQNHPWMQD 307
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 90 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 146
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 203
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 262
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 323 EVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 22 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 79 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 138 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 194
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 195 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 244
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 22 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 79 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 138 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 194
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 195 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 244
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQD 265
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG Y +K T A A K I + E+ +D EI+I+ +HP +V++ G Y
Sbjct: 32 FGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA-TCDHPYIVKLLGAYYH 87
Query: 100 SVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++E C GG + D I+ + +E + + + ++ + HS ++HRDLK
Sbjct: 88 DGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 158 NFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL------KHYGPEI 210
N L +GD + DFG+S K Q +G+PY++APEV++ Y +
Sbjct: 147 NVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK------DLI 264
D+WS G+ L + PP + +I + SDP P++ +K D +
Sbjct: 204 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDP-PTLLTPSKWSVEFRDFL 256
Query: 265 RKMLERDPRRRISAHEVLCHPWI 287
+ L+++P R SA ++L HP++
Sbjct: 257 KIALDKNPETRPSAAQLLEHPFV 279
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 21 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 77
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 78 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 137 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 193
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 194 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 243
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQD 264
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 26/260 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 37 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 93 IKGTYEDSVFVHLVMELCAG-GELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMH 151
+ +E L++E +LFD I +G E A ++ V CH+ GV+H
Sbjct: 94 LLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLH 153
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGPE 209
RD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 154 RDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 210 IDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 211 AAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLA 260
Query: 270 RDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 261 LRPSDRPTFEEIQNHPWMQD 280
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 49 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 106 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 165 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 221
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 271
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 15/178 (8%)
Query: 114 ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMAT 173
+LFD I +G E A ++ V CH+ GV+HRD+K EN L D + + KL+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI-- 200
Query: 174 DFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWA 231
DFG K Y +D G+ Y PE + H +G VWS G++LY ++ G PF
Sbjct: 201 DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 232 ETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+ E I++G++ F +S + LIR L P R + E+ HPW+ D
Sbjct: 260 DEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 20 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 76
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 77 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 135
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 136 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 192
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 193 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 242
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 243 ALRPSDRPTFEEIQNHPWMQD 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 36 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 92
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 93 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 151
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 152 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 208
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 209 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 258
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 259 ALRPSDRPTFEEIQNHPWMQD 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG Y +K T A A K I + E+ +D EI+I+ +HP +V++ G Y
Sbjct: 24 FGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILA-TCDHPYIVKLLGAYYH 79
Query: 100 SVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++E C GG + D I+ + +E + + + ++ + HS ++HRDLK
Sbjct: 80 DGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 158 NFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLL------KHYGPEI 210
N L +GD + DFG+S K Q +G+PY++APEV++ Y +
Sbjct: 139 NVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK------DLI 264
D+WS G+ L + PP + +I + SDP P++ +K D +
Sbjct: 196 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDP-PTLLTPSKWSVEFRDFL 248
Query: 265 RKMLERDPRRRISAHEVLCHPWI 287
+ L+++P R SA ++L HP++
Sbjct: 249 KIALDKNPETRPSAAQLLEHPFV 271
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 44/264 (16%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 68 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 124
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 181
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL-- 242
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 241
Query: 243 -----QGKLDF----------------ESDPW----PSISDSAKDLIRKMLERDPRRRIS 277
Q L+ PW P+ A DL+ KML +P +RI
Sbjct: 242 LGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 301
Query: 278 AHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 302 VEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 17 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 74 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 132
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 133 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 189
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 239
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQD 260
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 56 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 113 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 171
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 172 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 228
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 229 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCL 278
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 279 ALRPSDRPTFEEIQNHPWMQD 299
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 59/295 (20%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS--EHPNVVQIKGTY 97
FGT L K+T A K + +D RE+QIM L+ HPN+VQ++ +
Sbjct: 36 FGTVQLGKEKSTGMSVAIKKV-------IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYF 88
Query: 98 -------EDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVE-----GC- 144
+++++VME + R + +Y + A I V + + GC
Sbjct: 89 YTLGERDRRDIYLNVVMEYVP--DTLHR-CCRNYYRRQVAPPPILIKVFLFQLIRSIGCL 145
Query: 145 --HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL 202
S+ V HRD+KP N L + D L DFG + P + + S YY APE++
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELI 203
Query: 203 L--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------GKLD--- 247
+HY +D+WS G I ++ G P F + +G +I++ KL+
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263
Query: 248 -----FESD--PWPSI--------SDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ S PW ++ + A DL+ +L+ P R+ +E LCHP+
Sbjct: 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 37 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 94 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 153 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 209
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 210 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 259
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 260 ALRPXDRPTFEEIQNHPWMQD 280
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 44/266 (16%)
Query: 55 FACKSIPKRKLLCREDYDDV-WREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGG 113
F + + +++L D+ D+ EI+++ +HPNV++ + F+++ +ELC
Sbjct: 55 FQGRPVAVKRMLI--DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NL 111
Query: 114 ELFDRIVAKGHYSER-------EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTD-- 164
L D + +K E L++ I S V HSL ++HRDLKP+N L T
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSR 171
Query: 165 --------GDDAKLMATDFGLSVFYKPGQY-----LSDVVGSPYYVAPEVL----LKHYG 207
++ +++ +DFGL GQ L++ G+ + APE+L +
Sbjct: 172 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLT 231
Query: 208 PEIDVWSAGVILYILLS-GVPPFWAE--TESGIFKQILQGKLDFESDPWPSISD-----S 259
ID++S G + Y +LS G PF + ES I + I F D + D
Sbjct: 232 RSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI------FSLDEMKCLHDRSLIAE 285
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHP 285
A DLI +M++ DP +R +A +VL HP
Sbjct: 286 ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 36 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 92
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 93 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 151
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 152 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 208
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 209 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 258
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 259 ALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 37 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 94 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 153 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 209
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 210 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 259
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 260 ALRPSDRPTFEEIQNHPWMQD 280
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L HPN+V + + LV E ++ D K + +
Sbjct: 68 REISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIY 124
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVG 192
+ ++ V CH ++HRDLKP+N L ++DG L DFGL+ F P + + V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDG---ALKLADFGLARAFGIPVRSYTHEVV 181
Query: 193 SPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--GKLD- 247
+ +Y AP+VL+ K Y +D+WS G I +++G P F T+ +I G +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 248 -------------------FESDPW----PSISDSAKDLIRKMLERDPRRRISAHEVLCH 284
FE PW P DL+ ML DP +RISA + + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 285 PWIVD 289
P+ D
Sbjct: 302 PYFKD 306
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 64 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 120
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 121 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 180 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 236
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 286
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 287 ALRPSDRPTFEEIQNHPWMQD 307
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 69 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 125
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 126 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 184
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 185 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 241
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 242 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 291
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 292 ALRPSDRPTFEEIQNHPWMQD 312
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 74 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHI 130
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 187
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 246
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 307 EVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 17 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 74 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVL 132
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 133 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 189
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 239
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQD 260
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 44/266 (16%)
Query: 55 FACKSIPKRKLLCREDYDDV-WREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGG 113
F + + +++L D+ D+ EI+++ +HPNV++ + F+++ +ELC
Sbjct: 55 FQGRPVAVKRMLI--DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NL 111
Query: 114 ELFDRIVAKGHYSER-------EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTD-- 164
L D + +K E L++ I S V HSL ++HRDLKP+N L T
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSR 171
Query: 165 --------GDDAKLMATDFGLSVFYKPGQY-----LSDVVGSPYYVAPEVL----LKHYG 207
++ +++ +DFGL GQ L++ G+ + APE+L +
Sbjct: 172 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLT 231
Query: 208 PEIDVWSAGVILYILLS-GVPPFWAE--TESGIFKQILQGKLDFESDPWPSISD-----S 259
ID++S G + Y +LS G PF + ES I + I F D + D
Sbjct: 232 RSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI------FSLDEMKCLHDRSLIAE 285
Query: 260 AKDLIRKMLERDPRRRISAHEVLCHP 285
A DLI +M++ DP +R +A +VL HP
Sbjct: 286 ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 74 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 130
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 187
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L + V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 246
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 307 EVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 46/265 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKG-----TYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
REI+I+ H N++ I T E V++V +L +L+ +++ H S
Sbjct: 75 REIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHI 131
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGF 188
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQG 244
L + V + +Y APE++L K Y ID+WS G IL +LS P F + IL G
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G 247
Query: 245 KLDFESD------------------------PW----PSISDSAKDLIRKMLERDPRRRI 276
L S PW P+ A DL+ KML +P +RI
Sbjct: 248 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 307
Query: 277 SAHEVLCHPWIVDDTVAPDKPLDSA 301
+ L HP++ D+P+ A
Sbjct: 308 EVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 44 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 100
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 101 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 159
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 160 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 216
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I++G++ F +S + LIR L
Sbjct: 217 SAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCL 266
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 267 ALRPSDRPTFEEIQNHPWMQD 287
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L HPN+V + + LV E ++ D K + +
Sbjct: 68 REISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIY 124
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVG 192
+ ++ V CH ++HRDLKP+N L ++DG L DFGL+ F P + + V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDG---ALKLADFGLARAFGIPVRSYTHEVV 181
Query: 193 SPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--GKLD- 247
+ +Y AP+VL+ K Y +D+WS G I +++G P F T+ +I G +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 248 -------------------FESDPW----PSISDSAKDLIRKMLERDPRRRISAHEVLCH 284
FE PW P DL+ ML DP +RISA + + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 285 PWIVD 289
P+ D
Sbjct: 302 PYFKD 306
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+++ L+EE+I KE F + D D SG+I+ EL ++ +G E+E+ LM+ D+D
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 383 NGTIEYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
N IE+ EF+A + L + E+ L+ AF FD++G G I+ EL+ G L +
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
+DE+++E+ D G I+ +FA ++ +
Sbjct: 121 EVDEMLREV-SDGSGEINIKQFAALLSK 147
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 99/177 (55%), Gaps = 9/177 (5%)
Query: 297 PLDSAVLSRLKHFCAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELK 356
+D VL K++ M + +K+A+ +IA++ ++ ++ LK F +D + G IT +L+
Sbjct: 19 KIDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLR 78
Query: 357 VGLKRVGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDR 416
GL+R G ++ L+D D D +G I+Y EF+AA + ++ ++ + AF FD
Sbjct: 79 KGLERSGL-MLPPNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKL-IYCAFRVFDV 136
Query: 417 DGSGYITIDELQQAC----KEFGLGEVPLDEI---VKEIDQDNDGRIDYGEFATMMR 466
D G IT EL K + E ++++ ++E+D++ DG+ID+ EF+ MM+
Sbjct: 137 DNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 45/249 (18%)
Query: 76 REIQIMHHLS--EHPNVVQI----------KGTYEDSVFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ HL EHPNVV++ + T VF H+ +L D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPG 116
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E ++ ++ ++ HS V+HRDLKP+N L + G ++ DFGL+ Y
Sbjct: 117 VPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSF 172
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L+ VV + +Y APEVLL+ Y +D+WS G I + P F ++ +IL
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
Query: 243 QG-KLDFESDPWPS-----------------------ISDSAKDLIRKMLERDPRRRISA 278
L E D WP I + KDL+ K L +P +RISA
Sbjct: 233 DVIGLPGEED-WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Query: 279 HEVLCHPWI 287
+ L HP+
Sbjct: 292 YSALSHPYF 300
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D G IT ++L ++ +G E+E++ +++ D NG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 385 TIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEV 439
TI++ +F+ T+ KM + EE + AF F +DG+GYI+ +L+ G L +
Sbjct: 363 TIDFPQFL--TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDE 420
Query: 440 PLDEIVKEIDQDNDGRIDYGEFATMM 465
+DE+++E D DG+++Y +F MM
Sbjct: 421 EVDEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 49 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 106 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 165 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 221
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 271
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 44/261 (16%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVF-----VHLVMELCAGGELFDRIVAKGHYSEREA 130
REIQI+ H NV+ I+ S V++V +L +L+ +++ S
Sbjct: 90 REIQILLRF-RHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHI 146
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----Y 186
+ I+ ++ HS V+HRDLKP N L +T D L DFGL+ P +
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGF 203
Query: 187 LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL-- 242
L++ V + +Y APE++L K Y ID+WS G IL +LS P F + IL
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
Query: 243 ---------------QGKLDFESDP----------WPSISDSAKDLIRKMLERDPRRRIS 277
+ + +S P +P A DL+ +ML +P +RI+
Sbjct: 264 LGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRIT 323
Query: 278 AHEVLCHPWIVDDTVAPDKPL 298
E L HP++ D+P+
Sbjct: 324 VEEALAHPYLEQYYDPTDEPV 344
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + A K IP+R Y E +H +H N+VQ G++ +
Sbjct: 35 YGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
Query: 100 SVFVHLVMELCAGGELFDRIVAKG---HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKP 156
+ F+ + ME GG L + +K +E+ K I+ ++ H ++HRD+K
Sbjct: 91 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV-VGSPYYVAPEVLLK---HYGPEIDV 212
+N L +T K+ +DFG S ++ G+ Y+APE++ K YG D+
Sbjct: 151 DNVLINTYSGVLKI--SDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 208
Query: 213 WSAGVILYILLSGVPPFW--AETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLER 270
WS G + + +G PPF+ E ++ +FK G + S+S AK I K E
Sbjct: 209 WSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKAFILKCFEP 265
Query: 271 DPRRRISAHEVL 282
DP +R A+++L
Sbjct: 266 DPDKRACANDLL 277
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 50 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 107 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 166 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 222
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 272
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 49 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 106 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 165 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 221
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 271
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 50 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 107 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 166 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 222
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 272
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 17 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 74 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 132
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 133 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 189
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCL 239
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQD 260
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 50 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 107 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 166 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 222
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCL 272
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 49 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 106 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 165 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 221
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 222 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCL 271
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 15/254 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG Y + A K + E + D+ +E++ + L HPN +Q +G Y
Sbjct: 67 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLR 125
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
LVME C G V K E E A + + + HS ++HRD+K N
Sbjct: 126 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 185
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK----HYGPEIDVWSA 215
L G + DFG + P VG+PY++APEV+L Y ++DVWS
Sbjct: 186 LLSEPG---LVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSL 239
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLD-FESDPWPSISDSAKDLIRKMLERDPRR 274
G+ L PP + I Q + +S W S+ ++ + L++ P+
Sbjct: 240 GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQD 296
Query: 275 RISAHEVLCHPWIV 288
R ++ +L H +++
Sbjct: 297 RPTSEVLLKHRFVL 310
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSE-HPNVVQ 92
FG+ Y I + N A K + K ++ D+ + V E+ ++ +S V++
Sbjct: 50 FGSVYSGIRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 93 IKGTYE--DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ +E DS FV ++ +LFD I +G E A ++ V CH+ GV+
Sbjct: 107 LLDWFERPDS-FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH--YGP 208
HRD+K EN L D + + KL+ DFG K Y +D G+ Y PE + H +G
Sbjct: 166 HRDIKDENILIDLNRGELKLI--DFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGR 222
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKML 268
VWS G++LY ++ G PF + E I+ G++ F +S + LIR L
Sbjct: 223 SAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCL 272
Query: 269 ERDPRRRISAHEVLCHPWIVD 289
P R + E+ HPW+ D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + A K IP+R Y E +H +H N+VQ G++ +
Sbjct: 21 YGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 76
Query: 100 SVFVHLVMELCAGGELFDRIVAKG---HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKP 156
+ F+ + ME GG L + +K +E+ K I+ ++ H ++HRD+K
Sbjct: 77 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 136
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV-VGSPYYVAPEVLLK---HYGPEIDV 212
+N L +T K+ +DFG S ++ G+ Y+APE++ K YG D+
Sbjct: 137 DNVLINTYSGVLKI--SDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 213 WSAGVILYILLSGVPPFW--AETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLER 270
WS G + + +G PPF+ E ++ +FK G + S+S AK I K E
Sbjct: 195 WSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKAFILKCFEP 251
Query: 271 DPRRRISAHEVL 282
DP +R A+++L
Sbjct: 252 DPDKRACANDLL 263
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 15/254 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG Y + A K + E + D+ +E++ + L HPN +Q +G Y
Sbjct: 28 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLR 86
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
LVME C G V K E E A + + + HS ++HRD+K N
Sbjct: 87 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 146
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK----HYGPEIDVWSA 215
L G + DFG + P VG+PY++APEV+L Y ++DVWS
Sbjct: 147 LLSEPG---LVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSL 200
Query: 216 GVILYILLSGVPPFWAETESGIFKQILQGKLD-FESDPWPSISDSAKDLIRKMLERDPRR 274
G+ L PP + I Q + +S W S+ ++ + L++ P+
Sbjct: 201 GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQD 257
Query: 275 RISAHEVLCHPWIV 288
R ++ +L H +++
Sbjct: 258 RPTSEVLLKHRFVL 271
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 48/270 (17%)
Query: 55 FACKSIPKRKLLCREDYDDV-WREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGG 113
F + + +++L D+ D+ EI+++ +HPNV++ + F+++ +ELC
Sbjct: 37 FQGRPVAVKRMLI--DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NL 93
Query: 114 ELFDRIVAKGHYSER-------EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTD-- 164
L D + +K E L++ I S V HSL ++HRDLKP+N L T
Sbjct: 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSR 153
Query: 165 --------GDDAKLMATDFGLSVFYKPGQY-----LSDVVGSPYYVAPEVL--------L 203
++ +++ +DFGL GQ L++ G+ + APE+L
Sbjct: 154 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTK 213
Query: 204 KHYGPEIDVWSAGVILYILLS-GVPPFWAE--TESGIFKQILQGKLDFESDPWPSISD-- 258
+ ID++S G + Y +LS G PF + ES I + I F D + D
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI------FSLDEMKCLHDRS 267
Query: 259 ---SAKDLIRKMLERDPRRRISAHEVLCHP 285
A DLI +M++ DP +R +A +VL HP
Sbjct: 268 LIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 48/270 (17%)
Query: 55 FACKSIPKRKLLCREDYDDV-WREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGG 113
F + + +++L D+ D+ EI+++ +HPNV++ + F+++ +ELC
Sbjct: 37 FQGRPVAVKRMLI--DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NL 93
Query: 114 ELFDRIVAKGHYSER-------EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTD-- 164
L D + +K E L++ I S V HSL ++HRDLKP+N L T
Sbjct: 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSR 153
Query: 165 --------GDDAKLMATDFGLSVFYKPGQY-----LSDVVGSPYYVAPEVL--------L 203
++ +++ +DFGL GQ L++ G+ + APE+L
Sbjct: 154 FTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTK 213
Query: 204 KHYGPEIDVWSAGVILYILLS-GVPPFWAE--TESGIFKQILQGKLDFESDPWPSISD-- 258
+ ID++S G + Y +LS G PF + ES I + I F D + D
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI------FSLDEMKCLHDRS 267
Query: 259 ---SAKDLIRKMLERDPRRRISAHEVLCHP 285
A DLI +M++ DP +R +A +VL HP
Sbjct: 268 LIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+ ++E F + DTD SGTI +ELKV ++ +G + + EIK ++ D D +GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 387 EYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
++ EF+ T + + + E ++ AF FD D +G I+ L++ KE G + + L E
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQS 468
++ E D+D DG ++ EF +M+++
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKT 146
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 50/287 (17%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSEHPNVVQI 93
+GT + ++ T+ A K + R D DD REI ++ L +H N+V++
Sbjct: 15 YGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKEL-KHKNIVRL 66
Query: 94 KGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMH 151
+ LV E C + FD G + ++ + CHS V+H
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGP 208
RDLKP+N L + +G+ L DFGL+ F P + S V + +Y P+VL K Y
Sbjct: 125 RDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 209 EIDVWSAGVILYILLSGVPPFWAETE-SGIFKQILQGKLDFESDPWPSISD--------- 258
ID+WSAG I L + P + + K+I + + WPS++
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241
Query: 259 ----------------SAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+ +DL++ +L+ +P +RISA E L HP+ D
Sbjct: 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 27/294 (9%)
Query: 26 RDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS 85
RD + F + K T +A K + K +L R + E ++ +
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-G 118
Query: 86 EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKL-IKTIVSVVEGC 144
+ + Q+ ++D +++LVME GG+L + G E A+ + IV ++
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVV--GSPYYVAPEVL 202
H LG +HRD+KP+N L D G + DFG + + + +V G+P Y++PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLDRCG---HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
Query: 203 --------LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW- 253
YGPE D W+ GV Y + G PF+A++ + + +I+ K + S P
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK-EHLSLPLV 294
Query: 254 -PSISDSAKDLIRKMLERDPRR--RISAHEVLCHPWI-------VDDTVAPDKP 297
+ + A+D I+++L R R A + HP+ + D+V P P
Sbjct: 295 DEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTP 348
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 136/331 (41%), Gaps = 50/331 (15%)
Query: 1 MKKQSSGSGS----TKPANTVLPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFA 56
++ Q+ G GS P+ T + D Y +G Y I TN A
Sbjct: 12 LEAQTQGPGSMSVSAAPSATSI--------DRYRRITKLGEGTYGEVYKAIDTVTNETVA 63
Query: 57 CKSIPKRKLLCRED--YDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGE 114
K I +L E+ RE+ ++ L +H N++++K + +HL+ E A +
Sbjct: 64 IKRI---RLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEY-AEND 118
Query: 115 LFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFD-TDGDDAKLMAT 173
L + S R + +++ V CHS +HRDLKP+N L +D + ++
Sbjct: 119 LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKI 178
Query: 174 -DFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPF 229
DFGL+ F P + + + + +Y PE+LL +HY +D+WS I +L P F
Sbjct: 179 GDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
Query: 230 WAETESGIFKQILQGKLDFESDPWPSISD-----------SAKDLIR------------- 265
++E +I + + WP ++ K L R
Sbjct: 239 PGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDL 298
Query: 266 --KMLERDPRRRISAHEVLCHPWIVDDTVAP 294
MLE DP +RISA L HP+ + P
Sbjct: 299 LTAMLEMDPVKRISAKNALEHPYFSHNDFDP 329
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 16/212 (7%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIV-----AKGHYSE 127
D +EI ++ L+ HPNV++ ++ + +++V+EL G+L R++ K E
Sbjct: 78 DCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPE 135
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
R K + S +E HS VMHRD+KP N +F T KL D GL F+
Sbjct: 136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPAN-VFITATGVVKL--GDLGLGRFFSSKTTA 192
Query: 188 S-DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETES--GIFKQILQ 243
+ +VG+PYY++PE + ++ Y + D+WS G +LY + + PF+ + + + K+I Q
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ 252
Query: 244 GKLDFESDPWPSISDSAKDLIRKMLERDPRRR 275
D+ P S+ + L+ + DP +R
Sbjct: 253 --CDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 50/287 (17%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSEHPNVVQI 93
+GT + ++ T+ A K + R D DD REI ++ L +H N+V++
Sbjct: 15 YGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKEL-KHKNIVRL 66
Query: 94 KGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMH 151
+ LV E C + FD G + ++ + CHS V+H
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGP 208
RDLKP+N L + +G+ L +FGL+ F P + S V + +Y P+VL K Y
Sbjct: 125 RDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 209 EIDVWSAGVILYILL-SGVPPFWAETESGIFKQILQGKLDFESDPWPSISD--------- 258
ID+WSAG I L +G P F K+I + + WPS++
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241
Query: 259 ----------------SAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+ +DL++ +L+ +P +RISA E L HP+ D
Sbjct: 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+I K+ F D + +G I EL ++ +G E+E++ L+ A+ +NNG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 387 EYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
+ EF + + + EE + AF FDRDG G+I+ EL+ G + + +DE
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQ 467
+++E D D DG I+Y EF M+ Q
Sbjct: 124 MIREADFDGDGMINYEEFVWMISQ 147
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
AF FD++G+G I EL + G E L +++ E + +N+G++++ EF +M +
Sbjct: 15 AFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAK 74
Query: 468 SEGGVGKSRTMRNSLNFNIADAFGVKDPS 496
MR + D G P+
Sbjct: 75 QMRETDTEEEMREAFKIFDRDGDGFISPA 103
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 326 RLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGT 385
L+EE+I KE F + D D +G+I+ EL ++ +G E+E+ LM+ D+D N
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 386 IEYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLD 442
IE+ EF+A + L + E+ L+ AF FD++G G I+ EL+ G L + +D
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 443 EIVKEIDQDNDGRIDYGEFATMMRQ 467
++++E+ D G I+ +FA ++ +
Sbjct: 123 DMLREV-SDGSGEINIQQFAALLSK 146
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG C + T +ACK + K+++ R+ E QI+ ++ VV + YE
Sbjct: 197 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAYAYET 255
Query: 100 SVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ LV+ L GG+L I G + E A I +E H +++RDLKPE
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPE 315
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAG 216
N L D D + +D GL+V GQ + VG+ Y+APEV+ + Y D W+ G
Sbjct: 316 NILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
+LY +++G PF + +++ + + + S A+ L ++L +DP R+
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERL 432
Query: 277 -----SAHEVLCHP 285
SA EV HP
Sbjct: 433 GCRGGSAREVKEHP 446
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + + D G L
Sbjct: 54 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-----IPLPL 107
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKPEN L +T+G + DFGL+ F P +
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG---AIKLADFGLARAFGVPVRTYX 164
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 285 LAHPFFQDVT 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + + D G L
Sbjct: 52 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-----IPLPL 105
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKPEN L +T+G + DFGL+ F P +
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG---AIKLADFGLARAFGVPVRTYX 162
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 283 LAHPFFQDVT 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 132/313 (42%), Gaps = 56/313 (17%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD----- 73
P +P +++ +G Y +K T A K I R D +
Sbjct: 2 PLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPS 54
Query: 74 -VWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREA 130
REI ++ L+ HPN+V++ ++LV E + D G
Sbjct: 55 TAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IP 108
Query: 131 AKLIKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQ 185
LIK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVR 165
Query: 186 YLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
+ V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 166 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 244 GKLDFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISA 278
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 226 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 279 HEVLCHPWIVDDT 291
L HP+ D T
Sbjct: 286 KAALAHPFFQDVT 298
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 132/313 (42%), Gaps = 56/313 (17%)
Query: 19 PYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD----- 73
P +P +++ +G Y +K T A K I R D +
Sbjct: 2 PLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPS 54
Query: 74 -VWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREA 130
REI ++ L+ HPN+V++ ++LV E + D G
Sbjct: 55 TAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IP 108
Query: 131 AKLIKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQ 185
LIK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVR 165
Query: 186 YLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
+ V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 166 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 244 GKLDFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISA 278
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 226 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 279 HEVLCHPWIVDDT 291
L HP+ D T
Sbjct: 286 KAALAHPFFQDVT 298
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG C + T +ACK + K+++ R+ E QI+ ++ VV + YE
Sbjct: 197 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAYAYET 255
Query: 100 SVFVHLVMELCAGGELFDRIVAKGH--YSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ LV+ L GG+L I G + E A I +E H +++RDLKPE
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPE 315
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAG 216
N L D D + +D GL+V GQ + VG+ Y+APEV+ + Y D W+ G
Sbjct: 316 NILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 217 VILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
+LY +++G PF + +++ + + + S A+ L ++L +DP R+
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERL 432
Query: 277 -----SAHEVLCHP 285
SA EV HP
Sbjct: 433 GCRGGSAREVKEHP 446
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 47/252 (18%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV--FVHLVMELCAGGELFDRIVAKGHYSEREAAKL 133
REI+I+ +L PN++ + +D V LV E + Y R
Sbjct: 80 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FY 136
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
+ I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 194 PYYVAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-------- 243
Y+ PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTE 252
Query: 244 ------GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRR 275
K + E DP W +S A D + K+L D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 276 ISAHEVLCHPWI 287
++A E + HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 123/295 (41%), Gaps = 58/295 (19%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDY-DDVWREIQIMHHLSEHPNVVQIKGTYE 98
+ T Y ++KTT + A K + KL E REI +M L +H N+V++ Y+
Sbjct: 18 YATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKEL-KHENIVRL---YD 70
Query: 99 DSVFVHLVMELCAGGELFDRIVAK-------GHYSEREAAKLIK----TIVSVVEGCHSL 147
+H +L E D + K G+ L+K ++ + CH
Sbjct: 71 ---VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--K 204
++HRDLKP+N L + G +L DFGL+ F P S V + +Y AP+VL+ +
Sbjct: 128 KILHRDLKPQNLLINKRG---QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 205 HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK--- 261
Y ID+WS G IL +++G P F + K I WPS++ K
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244
Query: 262 ---------------------------DLIRKMLERDPRRRISAHEVLCHPWIVD 289
D + +L+ +P R+SA + L HPW +
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 47/264 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 55 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 108
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 165
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 166 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 225
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 226 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 285
Query: 282 LCHPWIVDDTVAPDKPLDSAVLSR 305
L HP+ D T KP+ L R
Sbjct: 286 LAHPFFQDVT----KPVPHLRLER 305
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 52 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 105
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKPEN L +T+G + DFGL+ F P +
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG---AIKLADFGLARAFGVPVRTYX 162
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 283 LAHPFFQDVT 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKPEN L +T+G + DFGL+ F P +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG---AIKLADFGLARAFGVPVRTYX 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 50 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 103
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 160
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 281 LAHPFFQDVT 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + + D G L
Sbjct: 53 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-----IPLPL 106
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 163
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 284 LAHPFFQDVT 293
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 43/207 (20%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDKPL-DSAVLS 304
E + HP+ +P D+AVLS
Sbjct: 316 REAMEHPYFYPVVKEQSQPCADNAVLS 342
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 14/243 (5%)
Query: 40 FGTTYLCIHKTTNAHFACKSI---PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGT 96
T YL N A K+I P+ K E RE+ LS H N+V +
Sbjct: 24 MSTVYLAEDTILNIKVAIKAIFIPPREK---EETLKRFEREVHNSSQLS-HQNIVSMIDV 79
Query: 97 YEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKP 156
E+ +LVME G L + I + G S A I+ ++ H + ++HRD+KP
Sbjct: 80 DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP 139
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQY--LSDVVGSPYYVAPEVLLKHYGPE-IDVW 213
+N L D+ + L DFG++ + V+G+ Y +PE E D++
Sbjct: 140 QNILIDS---NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
Query: 214 SAGVILYILLSGVPPFWAETESGI-FKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
S G++LY +L G PPF ET I K I + +D I S ++I + E+D
Sbjct: 197 SIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDK 256
Query: 273 RRR 275
R
Sbjct: 257 ANR 259
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 105 IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 50 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 103
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 160
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 281 LAHPFFQDVT 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 52 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 105
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 162
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 283 LAHPFFQDVT 292
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 53 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 106
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKPEN L +T+G + DFGL+ F P +
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG---AIKLADFGLARAFGVPVRTYX 163
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 284 LAHPFFQDVT 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + + D G L
Sbjct: 54 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-----IPLPL 107
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 164
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 285 LAHPFFQDVT 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 50 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 103
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 160
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 281 LAHPFFQDVT 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 50 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 103
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 160
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 281 LAHPFFQDVT 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 54 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 107
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 164
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 285 LAHPFFQDVT 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 52 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 105
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 162
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 283 LAHPFFQDVT 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 54 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 107
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 164
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 285 LAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 53 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 106
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 163
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 284 LAHPFFQDVT 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 52 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 105
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 162
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 283 LAHPFFQDVT 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 282 LAHPFFQDVT 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 50 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 103
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 160
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 281 LAHPFFQDVT 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 55 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 108
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 165
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 166 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 225
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 226 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 285
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 286 LAHPFFQDVT 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 53 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 106
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 163
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 284 LAHPFFQDVT 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 43/248 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 51 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPL 104
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 161
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 282 LCHPWIVD 289
L HP+ D
Sbjct: 282 LAHPFFQD 289
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N L D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVLIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FD++ G+I I+EL + + G + E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+++++K+ D++NDGRID+ EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E D G L
Sbjct: 54 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG-----IPLPL 107
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 164
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 285 LAHPFFQDVT 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E D G L
Sbjct: 50 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-----IPLPL 103
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P + +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYT 160
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 281 LAHPFFQDVT 290
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FD++ G+I I+EL + + G + E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMMR 466
+++++K+ D++NDGRID+ EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FD++ G+I I+EL + + G + E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+++++K+ D++NDGRID+ EF MM
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 254
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 315 REAMEHPYFY--TVVKDQ 330
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 255
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 316 REAMEHPYFY--TVVKDQ 331
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 254
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 315 REAMEHPYFY--TVVKDQ 330
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAG--GELFDRIVAKGHYSEREAAKL 133
REI ++ L+ HPN+V++ ++LV E + D G L
Sbjct: 54 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-----IPLPL 107
Query: 134 IKT-IVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLS 188
IK+ + +++G CHS V+HRDLKP+N L +T+G + DFGL+ F P +
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYX 164
Query: 189 DVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKL 246
V + +Y APE+LL K+Y +D+WS G I +++ F ++E +I +
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 247 DFESDPWPSIS-------------------------DSAKDLIRKMLERDPRRRISAHEV 281
+ WP ++ + + L+ +ML DP +RISA
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 282 LCHPWIVDDT 291
L HP+ D T
Sbjct: 285 LAHPFFQDVT 294
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 44/198 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 260
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 261 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 320
Query: 279 HEVLCHPWIVDDTVAPDK 296
E + HP+ TV D+
Sbjct: 321 REAMEHPYFY--TVVKDQ 336
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FD++ G+I I+EL + + G + E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
+++++K+ D++NDGRID+ EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FD++ G+I I+EL + + G + E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMMR 466
+++++K+ D++NDGRID+ EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 44/197 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
I+ ++ CHS+G+MHRD+KP N + D + KL D+GL+ FY PGQ + V S Y+
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLY 253
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + E DP W +S A D + K+L D + R++A
Sbjct: 254 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 313
Query: 279 HEVLCHPWIVDDTVAPD 295
E + HP+ TV D
Sbjct: 314 REAMEHPYFY--TVVKD 328
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FDR+ GYI +EL + + G + +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
++ ++K+ D++NDGRID+ EF MM
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EE+ ++E F + D D +GTI +ELKV ++ +G + + EIK ++ D + G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 388 YGEFIAA-TLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEI 444
+G+F+ T +++ + +E ++ AF FD D +G I+ L++ KE G L + L E+
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 445 VKEIDQDNDGRIDYGEFATMMRQ 467
+ E D+D DG + EF +M++
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMKK 143
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 66/300 (22%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSEHPNVVQI 93
+G HK T A K I E +D REI+I+ H +H N++ I
Sbjct: 24 YGVVCSATHKPTGEIVAIKKI--------EPFDKPLFALRTLREIKILKHF-KHENIITI 74
Query: 94 -----KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG 148
++E+ V+++ EL R+++ S+ I + V+ H
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY---------KPGQY--LSDVVGSPYYV 197
V+HRDLKP N L +++ D L DFGL+ GQ +++ V + +Y
Sbjct: 133 VIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 198 APEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAE----------------------- 232
APEV+L Y +DVWS G IL L P F
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 233 -TESGIFKQILQGKLDFESDP----WPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
ES ++ ++ + + P +P ++ DL+++ML DP +RI+A E L HP++
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 66/300 (22%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSEHPNVVQI 93
+G HK T A K I E +D REI+I+ H +H N++ I
Sbjct: 24 YGVVCSATHKPTGEIVAIKKI--------EPFDKPLFALRTLREIKILKHF-KHENIITI 74
Query: 94 -----KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG 148
++E+ V+++ EL R+++ S+ I + V+ H
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY---------KPGQY--LSDVVGSPYYV 197
V+HRDLKP N L +++ D L DFGL+ GQ +++ V + +Y
Sbjct: 133 VIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 198 APEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAE----------------------- 232
APEV+L Y +DVWS G IL L P F
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 233 -TESGIFKQILQGKLDFESDP----WPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
ES ++ ++ + + P +P ++ DL+++ML DP +RI+A E L HP++
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 86 EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER-EAAKLIKTIVSVVEGC 144
E N V+ + + + ME C G L+D I ++ +R E +L + I+ +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-------------PGQY--LSD 189
HS G++HRDLKP N D + + DFGL+ PG L+
Sbjct: 133 HSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 190 VVGSPYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWAETES-GIFKQILQGKL 246
+G+ YVA EVL HY +ID++S G+I + + + PF E I K++ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKLRSVSI 246
Query: 247 DFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+F D + K +IR +++ DP +R A +L W+
Sbjct: 247 EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE I K F M D D G I+ +EL ++ +G + E+ A+++ D D +GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 387 EYGEFIAATLHLNKME----REENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVP 440
++ EF+ + K + EE L F FDR+ GYI +EL + + G + +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
++ ++K+ D++NDGRID+ EF MM
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 43/259 (16%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ HL +H NV+ + + ED V+LV L G + IV S+
Sbjct: 74 TYRELRLLKHL-KHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSD 130
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ ++ ++ HS G++HRDLKP N + +D++L DFGL+ + + +
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLA--RQADEEM 185
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL G F K+I++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
Query: 244 --------GKLDFES--------DPWPSISDS---------AKDLIRKMLERDPRRRISA 278
K+ E P P S A DL+ +ML D +R+SA
Sbjct: 246 GTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSA 305
Query: 279 HEVLCHPWIVDDTVAPDKP 297
E L H + D+P
Sbjct: 306 AEALAHAYFSQYHDPEDEP 324
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P +V + G + +V++ MEL GG L + +G E A + + +E HS
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVV------GSPYYVAPEV 201
++H D+K +N L +DG A L DFG +V +P D++ G+ ++APEV
Sbjct: 186 RILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 202 LL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW----PSI 256
+L + ++DVWS+ ++ +L+G P W + F+ L K+ E P PS
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSC 298
Query: 257 SDSAKDLIRKMLERDPRRRISAHEV 281
+ I++ L ++P R+SA E+
Sbjct: 299 APLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 76 REIQIMHHLS--EHPNVVQIKGTYEDS----------VFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ L EHPNVV++ S VF H+ +L D+ G
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT---YLDKAPPPG 108
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E L++ + ++ H+ ++HRDLKPEN L T G KL DFGL+ Y
Sbjct: 109 LPAE-TIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-TSGGTVKL--ADFGLARIYSY 164
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L+ VV + +Y APEVLL+ Y +D+WS G I + P F +E+ +I
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
Query: 243 QGKLDFESDPW-----------------------PSISDSAKDLIRKMLERDPRRRISAH 279
D W P + +S L+ +ML +P +RISA
Sbjct: 225 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 280 EVLCHPWIVDDTVAPD 295
L H ++ D P+
Sbjct: 285 RALQHSYLHKDEGNPE 300
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 44/248 (17%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTYEDSVFV------HLVMELCAGGELFDRIVAKGHYSER 128
+RE+ ++ H+ +H NV+ + + + + +LVM +I+ +SE
Sbjct: 89 YRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEE 144
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS GV+HRDLKP N + +D +L DFGL+ ++
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLA--RHADAEMT 199
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APEV+L HY +D+WS G I+ +L+G F + QIL+
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 259
Query: 244 --------------GKLDFESDP----------WPSISDSAKDLIRKMLERDPRRRISAH 279
K +S P +P S A DL+ KMLE D +R++A
Sbjct: 260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 319
Query: 280 EVLCHPWI 287
+ L HP+
Sbjct: 320 QALTHPFF 327
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 76 REIQIMHHLS--EHPNVVQIKGTYEDS----------VFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ L EHPNVV++ S VF H+ +L D+ G
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAPPPG 116
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E L++ + ++ H+ ++HRDLKPEN L T G KL DFGL+ Y
Sbjct: 117 LPAE-TIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-TSGGTVKL--ADFGLARIYSY 172
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L+ VV + +Y APEVLL+ Y +D+WS G I + P F +E+ +I
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 232
Query: 243 QGKLDFESDPW-----------------------PSISDSAKDLIRKMLERDPRRRISAH 279
D W P + +S L+ +ML +P +RISA
Sbjct: 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292
Query: 280 EVLCHPWIVDDTVAPD 295
L H ++ D P+
Sbjct: 293 RALQHSYLHKDEGNPE 308
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 66/300 (22%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD------VWREIQIMHHLSEHPNVVQI 93
+G HK T A K I E +D REI+I+ H +H N++ I
Sbjct: 24 YGVVCSATHKPTGEIVAIKKI--------EPFDKPLFALRTLREIKILKHF-KHENIITI 74
Query: 94 -----KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG 148
++E+ V+++ EL R+++ S+ I + V+ H
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY---------KPGQY--LSDVVGSPYYV 197
V+HRDLKP N L +++ D L DFGL+ GQ + + V + +Y
Sbjct: 133 VIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 198 APEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAE----------------------- 232
APEV+L Y +DVWS G IL L P F
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 233 -TESGIFKQILQGKLDFESDP----WPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
ES ++ ++ + + P +P ++ DL+++ML DP +RI+A E L HP++
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 43/207 (20%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
++ ++ CHS G+MHRD+KP N + D KL D+GL+ FY P Q + V S Y+
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN--YDQLVRIAKVLGTEELY 256
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + DP W + +S A DL+ K+L D ++R++A
Sbjct: 257 GYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 316
Query: 279 HEVLCHPWIVDDTVAPDKP-LDSAVLS 304
E + HP+ +P D+AVLS
Sbjct: 317 KEAMEHPYFYPVVKEQSQPSADNAVLS 343
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 44/248 (17%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTYEDSVFV------HLVMELCAGGELFDRIVAKGHYSER 128
+RE+ ++ H+ +H NV+ + + + + +LVM +I+ +SE
Sbjct: 71 YRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEE 126
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS GV+HRDLKP N + +D +L DFGL+ ++
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLA--RHADAEMT 181
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APEV+L HY +D+WS G I+ +L+G F + QIL+
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 241
Query: 244 --------------GKLDFESDP----------WPSISDSAKDLIRKMLERDPRRRISAH 279
K +S P +P S A DL+ KMLE D +R++A
Sbjct: 242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301
Query: 280 EVLCHPWI 287
+ L HP+
Sbjct: 302 QALTHPFF 309
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDS-VFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE + ++++VME C +L + K E
Sbjct: 52 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 110
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 166
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 221
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 222 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYE-DSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE ++++VME C +L + K E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 213
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 268
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 269 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYE-DSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE ++++VME C +L + K E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 213
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 268
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 269 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 106/238 (44%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDS-VFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE + ++++VME C +L + K E
Sbjct: 71 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL--- 187
K ++ V H G++H DLKP NFL D L DFG++ +P
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVK 185
Query: 188 SDVVGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 240
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 241 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 43/256 (16%)
Query: 76 REIQIMHHLS--EHPNVVQIKGTYEDS----------VFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ L EHPNVV++ S VF H+ +L D+ G
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT---YLDKAPPPG 108
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E L++ + ++ H+ ++HRDLKPEN L T G KL DFGL+ Y
Sbjct: 109 LPAE-TIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-TSGGTVKL--ADFGLARIYSY 164
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L VV + +Y APEVLL+ Y +D+WS G I + P F +E+ +I
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
Query: 243 QGKLDFESDPW-----------------------PSISDSAKDLIRKMLERDPRRRISAH 279
D W P + +S L+ +ML +P +RISA
Sbjct: 225 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 280 EVLCHPWIVDDTVAPD 295
L H ++ D P+
Sbjct: 285 RALQHSYLHKDEGNPE 300
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P +V + G + +V++ MEL GG L + +G E A + + +E HS
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP---GQYLSD---VVGSPYYVAPEV 201
++H D+K +N L +DG A L DFG +V +P G+ L + G+ ++APEV
Sbjct: 205 RILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 202 LL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW----PSI 256
+L + ++DVWS+ ++ +L+G P W + F+ L K+ E P PS
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSC 317
Query: 257 SDSAKDLIRKMLERDPRRRISAHEV 281
+ I++ L ++P R+SA E+
Sbjct: 318 APLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYE-DSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE ++++VME C +L + K E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 213
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 268
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 269 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDS-VFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE + ++++VME C +L + K E
Sbjct: 71 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 185
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 240
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 241 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 96 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 150
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 151 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 204
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 205 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 324
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 325 PTARLTPLEACAH 337
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 90 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 144
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 145 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 198
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 199 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 258
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 259 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 318
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 319 PTARLTPLEACAH 331
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 96 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 150
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 151 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 204
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAET--- 233
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Query: 234 ---------ESGIFKQILQGKLDF--------ESDPW-----PSISDSAKDLIRKMLERD 271
+ +QI + ++ ++ PW P A L ++LE
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 324
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 325 PTARLTPLEACAH 337
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 43/259 (16%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ HL +H NV+ + + ED V+LV L G + IV S+
Sbjct: 74 TYRELRLLKHL-KHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSD 130
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ ++ ++ HS G++HRDLKP N + +D++L DFGL+ + + +
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLA--RQADEEM 185
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL G F K+I++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
Query: 244 --------GKLDFES--------DPWPSISDS---------AKDLIRKMLERDPRRRISA 278
K+ E P P S A DL+ +ML D +R+SA
Sbjct: 246 GTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSA 305
Query: 279 HEVLCHPWIVDDTVAPDKP 297
E L H + D+P
Sbjct: 306 AEALAHAYFSQYHDPEDEP 324
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 100 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 154
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 155 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 208
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAET--- 233
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 209 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 268
Query: 234 ---------ESGIFKQILQGKLDF--------ESDPW-----PSISDSAKDLIRKMLERD 271
+ +QI + ++ ++ PW P A L ++LE
Sbjct: 269 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 328
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 329 PTARLTPLEACAH 341
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 98 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 152
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 153 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 206
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAET--- 233
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 207 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 266
Query: 234 ---------ESGIFKQILQGKLDF--------ESDPW-----PSISDSAKDLIRKMLERD 271
+ +QI + ++ ++ PW P A L ++LE
Sbjct: 267 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 326
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 327 PTARLTPLEACAH 339
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 141 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 195
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 196 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 249
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAET--- 233
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 250 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 309
Query: 234 ---------ESGIFKQILQGKLDF--------ESDPW-----PSISDSAKDLIRKMLERD 271
+ +QI + ++ ++ PW P A L ++LE
Sbjct: 310 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 369
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 370 PTARLTPLEACAH 382
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 90 VVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV 149
V + G+Y + ++ME GG D + A G + E + A ++K I+ ++ HS
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 150 MHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV-VGSPYYVAPEVLLKH-YG 207
+HRD+K N L GD + DFG++ Q + VG+P+++APEV+ + Y
Sbjct: 142 IHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 208 PEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISD---SAKDLI 264
+ D+WS G+ L G PP ++ + + L +++P + D S K+ I
Sbjct: 199 SKADIWSLGITAIELAKGEPP---NSDMHPMRVLF---LIPKNNPPTLVGDFTKSFKEFI 252
Query: 265 RKMLERDPRRRISAHEVLCHPWIVDDT 291
L +DP R +A E+L H +IV ++
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDS-VFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE + ++++VME C +L + K E
Sbjct: 55 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 113
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 169
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 170 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 224
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 225 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDS-VFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D EI ++ L +H + + YE + ++++VME C +L + K E
Sbjct: 51 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 109
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP--GQYLS 188
K ++ V H G++H DLKP NFL D L DFG++ +P +
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 165
Query: 189 DV-VGSPYYVAPEVL------------LKHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
D VG+ Y+ PE + P+ DVWS G ILY + G PF
Sbjct: 166 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 220
Query: 236 GIFKQILQGKLDFESDP-----WPSISDS-AKDLIRKMLERDPRRRISAHEVLCHPWI 287
I QI KL DP +P I + +D+++ L+RDP++RIS E+L HP++
Sbjct: 221 QIINQI--SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 123/321 (38%), Gaps = 83/321 (25%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE- 98
+G + I + T A K I D +REI I+ LS H N+V +
Sbjct: 22 YGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA 80
Query: 99 ----DSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDL 154
D V ME + I+ H ++ ++ V++ HS G++HRD+
Sbjct: 81 DNDRDVYLVFDYMETDLHAVIRANILEPVH-----KQYVVYQLIKVIKYLHSGGLLHRDM 135
Query: 155 KPENFLFDTDGDDAKLMATDFGLSV----------------------FYKPGQYLSDVVG 192
KP N L + + + DFGLS F L+D V
Sbjct: 136 KPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVA 192
Query: 193 SPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFES 250
+ +Y APE+LL Y ID+WS G IL +L G P F + ++I+ G +DF S
Sbjct: 193 TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVIDFPS 251
Query: 251 --------------------------------------------DPWPSISDSAKDLIRK 266
+P ++ A DL+ K
Sbjct: 252 NEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDK 311
Query: 267 MLERDPRRRISAHEVLCHPWI 287
+L+ +P +RISA++ L HP++
Sbjct: 312 LLQFNPNKRISANDALKHPFV 332
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 43/256 (16%)
Query: 76 REIQIMHHLS--EHPNVVQIKGTYEDS----------VFVHLVMELCAGGELFDRIVAKG 123
RE+ ++ L EHPNVV++ S VF H+ +L D+ G
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT---YLDKAPPPG 108
Query: 124 HYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+E L++ + ++ H+ ++HRDLKPEN L T G KL DFGL+ Y
Sbjct: 109 LPAE-TIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-TSGGTVKL--ADFGLARIYSY 164
Query: 184 GQYLSDVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
L VV + +Y APEVLL+ Y +D+WS G I + P F +E+ +I
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
Query: 243 QGKLDFESDPW-----------------------PSISDSAKDLIRKMLERDPRRRISAH 279
D W P + +S L+ +ML +P +RISA
Sbjct: 225 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 280 EVLCHPWIVDDTVAPD 295
L H ++ D P+
Sbjct: 285 RALQHSYLHKDEGNPE 300
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 74 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 128
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 182
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 183 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 243 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 302
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 303 PTARLTPLEACAH 315
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 67 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 121
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 122 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 175
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 176 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 235
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 236 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 295
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 296 PTARLTPLEACAH 308
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 43/258 (16%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ HL +H NV+ + + ED V+LV L G + IV S+
Sbjct: 67 YRELRLLKHL-KHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDE 123
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
L+ ++ ++ HS G++HRDLKP N + +D +L DFGL+ + + ++
Sbjct: 124 HVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLA--RQADEEMT 178
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL G F K+I++
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 238
Query: 244 -------GKLDFES--------DPWPSISDS---------AKDLIRKMLERDPRRRISAH 279
K+ E P P S A DL+ +ML D +R+SA
Sbjct: 239 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAA 298
Query: 280 EVLCHPWIVDDTVAPDKP 297
E L H + D+P
Sbjct: 299 EALAHAYFSQYHDPEDEP 316
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 74 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 128
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 182
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 183 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 243 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 302
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 303 PTARLTPLEACAH 315
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 81 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 135
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 136 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 189
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 190 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 249
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 250 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 309
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 310 PTARLTPLEACAH 322
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 70 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 124
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 125 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 178
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 179 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 238
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 239 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 298
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 299 PTARLTPLEACAH 311
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 49/272 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 97 TYRELRLLKHM-KHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 153
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 154 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 208
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F +QI++
Sbjct: 209 TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT 268
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K +F +D + + A DL+ KML D +RI+
Sbjct: 269 GTPPASVISRMPSHEARNYINSLPQMPKRNF-ADVFIGANPLAVDLLEKMLVLDTDKRIT 327
Query: 278 AHEVLCHPWIVD----DTVAPDKPLDSAVLSR 305
A E L HP+ D +P D + SR
Sbjct: 328 ASEALAHPYFSQYHDPDDEPESEPYDQSFESR 359
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 75 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 129
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 130 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 183
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 184 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 243
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 244 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 303
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 304 PTARLTPLEACAH 316
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 45/238 (18%)
Query: 89 NVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG 148
NV + T E+ V+LVMEL +++ ER + L+ ++ ++ HS G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHER-MSYLLYQMLCGIKHLHSAG 146
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH-YG 207
++HRDLKP N + + D L DFGL+ ++ V + YY APEV+L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 208 PEIDVWSAGVILYILLSGVPPF--------WAE------TESGIFKQILQGKLD--FESD 251
+D+WS G I+ L+ G F W + T S F LQ + E+
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 252 P-WPSI---------------------SDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
P +P I + A+DL+ KML DP +RIS E L HP+I
Sbjct: 264 PKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 48/264 (18%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 116
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 237 IFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPR-RRISAHEVLCHPWIVDDTVAPD 295
+I++ + ++ IR+M +P + ++ HPW P
Sbjct: 231 QLVEIIK-----------VLGTPTREQIREM---NPNYTEFAFPQIKAHPW--TKVFRPR 274
Query: 296 KPLDS-AVLSRLKHFCAMNKLKKM 318
P ++ A+ SRL + +L +
Sbjct: 275 TPPEAIALCSRLLEYTPTARLTPL 298
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 66 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 120
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 121 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 174
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 175 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 234
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 235 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 294
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 295 PTARLTPLEACAH 307
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 116
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 291 PTARLTPLEACAH 303
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 63 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 117
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 118 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 171
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 172 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 231
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 232 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 291
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 292 PTARLTPLEACAH 304
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 116
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 291 PTARLTPLEACAH 303
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
REI+++ L H N+V + + +LV E L D + + K +
Sbjct: 73 REIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSP 194
I++ + CHS ++HRD+KPEN L G + DFG + PG+ D V +
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 195 YYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--GKLD--- 247
+Y APE+L+ YG +DVW+ G ++ + G P F +++ I+ G L
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 248 ---FESDP-------------------WPSISDSAKDLIRKMLERDPRRRISAHEVLCHP 285
F +P +P +S+ DL +K L DP +R E+L H
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 286 WIVDDTVA 293
+ D A
Sbjct: 309 FFQMDGFA 316
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 116
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 291 PTARLTPLEACAH 303
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAK 116
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 291 PTARLTPLEACAH 303
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 86 EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER-EAAKLIKTIVSVVEGC 144
E N V+ + + + ME C L+D I ++ +R E +L + I+ +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-------------PGQY--LSD 189
HS G++HRDLKP N D + + DFGL+ PG L+
Sbjct: 133 HSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 190 VVGSPYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWAETES-GIFKQILQGKL 246
+G+ YVA EVL HY +ID++S G+I + + + PF E I K++ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKLRSVSI 246
Query: 247 DFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+F D + K +IR +++ DP +R A +L W+
Sbjct: 247 EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 55/253 (21%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ E R+ HYS +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVAR--HYSRAK 116
Query: 130 AA-----------KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS 178
+L +++ + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYI----HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 179 VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESG 236
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 237 IFKQILQ-----------------GKLDF---ESDPW-----PSISDSAKDLIRKMLERD 271
+I++ + F ++ PW P A L ++LE
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290
Query: 272 PRRRISAHEVLCH 284
P R++ E H
Sbjct: 291 PTARLTPLEACAH 303
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 45/238 (18%)
Query: 89 NVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG 148
NV + T E+ V+LVMEL +++ ER + L+ ++ ++ HS G
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHER-MSYLLYQMLCGIKHLHSAG 144
Query: 149 VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH-YG 207
++HRDLKP N + + D L DFGL+ ++ V + YY APEV+L Y
Sbjct: 145 IIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 208 PEIDVWSAGVILYILLSGVPPF--------WAE------TESGIFKQILQGKLD--FESD 251
+D+WS G I+ L+ G F W + T S F LQ + E+
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
Query: 252 P-WPSI---------------------SDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
P +P I + A+DL+ KML DP +RIS E L HP+I
Sbjct: 262 PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIK----- 94
FG IH+ T A K R+ L ++ + EIQIM L+ HPNVV +
Sbjct: 27 FGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDG 83
Query: 95 -GTYEDSVFVHLVMELCAGGEL---FDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ L ME C GG+L ++ E L+ I S + H ++
Sbjct: 84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRII 143
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPE 209
HRDLKPEN + D G + G+ ++ VG+ Y+APE+L K Y
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 203
Query: 210 IDVWSAGVILYILLSGVPPF 229
+D WS G + + ++G PF
Sbjct: 204 VDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIK----- 94
FG IH+ T A K R+ L ++ + EIQIM L+ HPNVV +
Sbjct: 28 FGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDG 84
Query: 95 -GTYEDSVFVHLVMELCAGGEL---FDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
+ L ME C GG+L ++ E L+ I S + H ++
Sbjct: 85 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRII 144
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPE 209
HRDLKPEN + D G + G+ ++ VG+ Y+APE+L K Y
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 204
Query: 210 IDVWSAGVILYILLSGVPPF 229
+D WS G + + ++G PF
Sbjct: 205 VDYWSFGTLAFECITGFRPF 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 38/259 (14%)
Query: 76 REIQIMHHLSEHPNVVQIK------GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSERE 129
RE+QIM L +H N+V+++ G +D V+++LV++ VA+ + ++
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQ 117
Query: 130 AAKLIKT------IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP 183
+I + + HS G+ HRD+KP+N L D D A L DFG +
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVR 175
Query: 184 GQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQI 241
G+ + S YY APE++ Y IDVWSAG +L LL G P F ++ +I
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 242 LQGKLDFESDPWPSISDSAKDLIRKMLERDPR-RRISAHEVLCHPWIVDDTVAPDKPLDS 300
++ + ++ IR+M +P + ++ HPW P P ++
Sbjct: 236 IK-----------VLGTPTREQIREM---NPNYTEFAFPQIKAHPW--TKVFRPRTPPEA 279
Query: 301 -AVLSRLKHFCAMNKLKKM 318
A+ SRL + +L +
Sbjct: 280 IALCSRLLEYTPTARLTPL 298
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M + H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L + +V + + HS G++HRDLKP N + + DA L DFGL+ ++
Sbjct: 128 MSYLLYQMLVGI-KHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS GVI+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M + H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L + +V + + HS G++HRDLKP N + + DA L DFGL+ ++
Sbjct: 128 MSYLLYQMLVGI-KHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS GVI+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 42/189 (22%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY 196
++ ++ CHS G+MHRD+KP N + D KL D+GL+ FY P Q + V S Y+
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 197 VAPEVLLKH--YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ----------- 243
PE+L+ + Y +D+WS G +L ++ PF+ ++ + Q+++
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN--YDQLVRIAKVLGTEELY 261
Query: 244 ---GKLDFESDP-------------WPS---------ISDSAKDLIRKMLERDPRRRISA 278
K + DP W + +S A DL+ K+L D ++R++A
Sbjct: 262 GYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 321
Query: 279 HEVLCHPWI 287
E + HP+
Sbjct: 322 KEAMEHPYF 330
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 78/314 (24%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD----DVWREIQIMHHLSEHPNVVQI-- 93
FG + H+ T A K K+L + + REI+I+ L +H NVV +
Sbjct: 31 FGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 84
Query: 94 ------------KGTYEDSVFVHLVMELC----AGGELFDRIVAKGHYSEREAAKLIKTI 137
KG+ ++LV + C AG L ++ K ++ E ++++ +
Sbjct: 85 ICRTKASPYNRCKGS------IYLVFDFCEHDLAG--LLSNVLVK--FTLSEIKRVMQML 134
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY------KPGQYLSDVV 191
++ + H ++HRD+K N L DG L DFGL+ + +P +Y + VV
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 192 GSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFE 249
+ +Y PE+LL + YGP ID+W AG I+ + + P TE I Q
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 250 SDPWPSISD----------------------------SAKDLIRKMLERDPRRRISAHEV 281
+ WP++ + A DLI K+L DP +RI + +
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 282 LCHPWIVDDTVAPD 295
L H + D + D
Sbjct: 311 LNHDFFWSDPMPSD 324
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 50/286 (17%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPK---RKLLCREDYDDVWREIQIMHHLSEHPNVVQI--- 93
+G + T A A K + + +L + Y RE++++ H+ H NV+ +
Sbjct: 38 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY----RELRLLKHM-RHENVIGLLDV 92
Query: 94 ---KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVM 150
T +D +LVM G +++ E L+ ++ + H+ G++
Sbjct: 93 FTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGP 208
HRDLKP N + +D +L DFGL+ + + V + +Y APEV+L Y
Sbjct: 151 HRDLKPGNLAVN---EDCELKILDFGLA--RQADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 209 EIDVWSAGVILYILLSG---------------------VPP--FWAETESGIFKQILQGK 245
+D+WS G I+ +++G PP F +S K ++G
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265
Query: 246 LDFESDPWPSI----SDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ E + SI S A +L+ KML D +R++A E L HP+
Sbjct: 266 PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 75 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 131
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTADEM 186
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 305
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D ++ SR
Sbjct: 306 AAQALAHAYFAQYHDPDDEPVAD-PYDQSLESR 337
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 129/308 (41%), Gaps = 66/308 (21%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD----DVWREIQIMHHLSEHPNVVQI-- 93
FG + H+ T A K K+L + + REI+I+ L +H NVV +
Sbjct: 31 FGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 84
Query: 94 -----KGTYED-SVFVHLVMELC----AGGELFDRIVAKGHYSEREAAKLIKTIVSVVEG 143
Y ++LV + C AG L ++ K ++ E ++++ +++ +
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAG--LLSNVLVK--FTLSEIKRVMQMLLNGLYY 140
Query: 144 CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY------KPGQYLSDVVGSPYYV 197
H ++HRD+K N L DG L DFGL+ + +P +Y + VV + +Y
Sbjct: 141 IHRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 198 APEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPS 255
PE+LL + YGP ID+W AG I+ + + P TE I Q + WP+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 256 ISD----------------------------SAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+ + A DLI K+L DP +RI + + L H +
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
Query: 288 VDDTVAPD 295
D + D
Sbjct: 317 WSDPMPSD 324
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D++L DFGL +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLC--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D ++ SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSLESR 330
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 26/226 (11%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
+EI ++ + P + + G+Y S + ++ME GG D ++ G E A +++
Sbjct: 66 QEITVLSQ-CDSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILR 123
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV----- 190
I+ ++ HS +HRD+K N L GD + DFG++ GQ L+D
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGD---VKLADFGVA-----GQ-LTDTQIKRN 174
Query: 191 --VGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLD 247
VG+P+++APEV+ + Y + D+WS G+ L G PP S + + +
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP-----NSDLHPMRVLFLIP 229
Query: 248 FESDPW--PSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
S P S K+ + L +DPR R +A E+L H +I T
Sbjct: 230 KNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 275
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 78/314 (24%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD----DVWREIQIMHHLSEHPNVVQI-- 93
FG + H+ T A K K+L + + REI+I+ L +H NVV +
Sbjct: 31 FGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 84
Query: 94 ------------KGTYEDSVFVHLVMELC----AGGELFDRIVAKGHYSEREAAKLIKTI 137
KG+ ++LV + C AG L ++ K ++ E ++++ +
Sbjct: 85 ICRTKASPYNRCKGS------IYLVFDFCEHDLAG--LLSNVLVK--FTLSEIKRVMQML 134
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY------KPGQYLSDVV 191
++ + H ++HRD+K N L DG L DFGL+ + +P +Y + VV
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 192 GSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFE 249
+ +Y PE+LL + YGP ID+W AG I+ + + P TE I Q
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 250 SDPWPSISD----------------------------SAKDLIRKMLERDPRRRISAHEV 281
+ WP++ + A DLI K+L DP +RI + +
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 282 LCHPWIVDDTVAPD 295
L H + D + D
Sbjct: 311 LNHDFFWSDPMPSD 324
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS--EHPNVVQIKGTY 97
FG Y C T +A K + K+++ ++ E ++ +S + P +V + +
Sbjct: 201 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 260
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++L GG+L + G +SE + I+ +E H+ V++RDLKP
Sbjct: 261 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 320
Query: 158 NFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWS 214
N L D G + +D GL+ F K + S VG+ Y+APEVL K Y D +S
Sbjct: 321 NILLDEHG---HVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFS 375
Query: 215 AGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRR 274
G +L+ LL G PF + ++ +I + L + S S + L+ +L+RD R
Sbjct: 376 LGCMLFKLLRGHSPF-RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 434
Query: 275 RI 276
R+
Sbjct: 435 RL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS--EHPNVVQIKGTY 97
FG Y C T +A K + K+++ ++ E ++ +S + P +V + +
Sbjct: 202 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 261
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++L GG+L + G +SE + I+ +E H+ V++RDLKP
Sbjct: 262 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 158 NFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWS 214
N L D G + +D GL+ F K + S VG+ Y+APEVL K Y D +S
Sbjct: 322 NILLDEHG---HVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 215 AGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRR 274
G +L+ LL G PF + ++ +I + L + S S + L+ +L+RD R
Sbjct: 377 LGCMLFKLLRGHSPF-RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 435
Query: 275 RI 276
R+
Sbjct: 436 RL 437
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 132 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 189
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 190 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 249
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 250 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 310 ALEAMTHPYF 319
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 133 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 190
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 191 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 250
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 251 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 310
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 311 ALEAMTHPYF 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 132 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 189
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 190 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 249
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 250 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 310 ALEAMTHPYF 319
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 309 ALEAMTHPYF 318
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 78/314 (24%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYD----DVWREIQIMHHLSEHPNVVQI-- 93
FG + H+ T A K K+L + + REI+I+ L +H NVV +
Sbjct: 30 FGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 83
Query: 94 ------------KGTYEDSVFVHLVMELC----AGGELFDRIVAKGHYSEREAAKLIKTI 137
KG+ ++LV + C AG L ++ K ++ E ++++ +
Sbjct: 84 ICRTKASPYNRCKGS------IYLVFDFCEHDLAG--LLSNVLVK--FTLSEIKRVMQML 133
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY------KPGQYLSDVV 191
++ + H ++HRD+K N L DG L DFGL+ + +P +Y + VV
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 192 GSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFE 249
+ +Y PE+LL + YGP ID+W AG I+ + + P TE I Q
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 250 SDPWPSISD----------------------------SAKDLIRKMLERDPRRRISAHEV 281
+ WP++ + A DLI K+L DP +RI + +
Sbjct: 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309
Query: 282 LCHPWIVDDTVAPD 295
L H + D + D
Sbjct: 310 LNHDFFWSDPMPSD 323
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 71 YRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 11/244 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS--EHPNVVQIKGTY 97
FG Y C T +A K + K+++ ++ E ++ +S + P +V + +
Sbjct: 202 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 261
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++L GG+L + G +SE + I+ +E H+ V++RDLKP
Sbjct: 262 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 158 NFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWS 214
N L D G + +D GL+ F K + S VG+ Y+APEVL K Y D +S
Sbjct: 322 NILLDEHG---HVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 215 AGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRR 274
G +L+ LL G PF + ++ +I + L + S S + L+ +L+RD R
Sbjct: 377 LGCMLFKLLRGHSPF-RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 435
Query: 275 RISA 278
R+
Sbjct: 436 RLGC 439
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 11/244 (4%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLS--EHPNVVQIKGTY 97
FG Y C T +A K + K+++ ++ E ++ +S + P +V + +
Sbjct: 202 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 261
Query: 98 EDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+ +++L GG+L + G +SE + I+ +E H+ V++RDLKP
Sbjct: 262 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 158 NFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWS 214
N L D G + +D GL+ F K + S VG+ Y+APEVL K Y D +S
Sbjct: 322 NILLDEHG---HVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 215 AGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRR 274
G +L+ LL G PF + ++ +I + L + S S + L+ +L+RD R
Sbjct: 377 LGCMLFKLLRGHSPF-RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 435
Query: 275 RISA 278
R+
Sbjct: 436 RLGC 439
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 309 ALEAMTHPYF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 309 ALEAMTHPYF 318
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 71 YRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 75 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 131
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTADEM 186
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 305
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 306 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 337
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 309 ALEAMTHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 309 ALEAMTHPYF 318
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWA--ETESGIFK---------- 239
Y+ PE+L L+ Y +D+WS G + ++ PF+ + + K
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 240 QILQGKLDFESD-------------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ K E D PW +S A D + K+L D + R++
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 309 ALEAMTHPYF 318
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PFDQSFESR 330
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 75 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 131
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTADEM 186
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 305
Query: 278 AHEVLCHPWIVDDTVAPDKPL 298
A + L H + D+P+
Sbjct: 306 AAQALAHAYFAQYHDPDDEPV 326
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 70 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 126
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D++L DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLA--RHTDDEM 181
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 300
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 301 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 332
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 74 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 130
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D++L DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLA--RHTDDEM 185
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 304
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 305 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 336
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M + H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L + +V + + HS G++HRDLKP N + + DA L DFGL+ ++
Sbjct: 128 MSYLLYQMLVGI-KHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 38/190 (20%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I ++ ++ CHS G+MHRD+KP N + D + KL D+GL+ FY PG+ + V S
Sbjct: 152 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVAS 209
Query: 194 PYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWAETES--------------GI 237
Y+ PE+L L+ Y +D+WS G + ++ PF+ ++ G+
Sbjct: 210 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 269
Query: 238 FKQILQGKLDFESD-----------PWPS---------ISDSAKDLIRKMLERDPRRRIS 277
+ + +++ + PW +S A D + K+L D + R++
Sbjct: 270 NAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 329
Query: 278 AHEVLCHPWI 287
A E + HP+
Sbjct: 330 ALEAMTHPYF 339
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 109 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 165
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 166 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 221
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 282 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 341 VIDPAKRISVDDALQHPYI 359
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 80 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 136
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 191
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 310
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 311 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 342
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 71 YRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
+EI ++ + P V + G+Y + ++ME GG D ++ G E + A +++
Sbjct: 54 QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILR 111
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV-VGSP 194
I+ ++ HS +HRD+K N L G+ + DFG++ Q + VG+P
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTP 168
Query: 195 YYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+++APEV+ + Y + D+WS G+ L G PP +E K + L +++P
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF---LIPKNNP- 221
Query: 254 PSI----SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
P++ S K+ + L ++P R +A E+L H +I+ +
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 79 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 135
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 190
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 309
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 310 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 341
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 326 RLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGT 385
L+EE+I KE F + D D +G+I+ EL ++ +G E+E+ LM+ D+D N
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 386 IEYGEFIA-ATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
IE+ EF+A + L + E+ L+ AF FD++G G I+ EL+ G
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGL--GEVPLDEIVKEIDQDNDGRIDYGEF-ATMMR 466
AF+ FD+D +G I+ EL + GL E +++++ EID D + +I++ EF A M R
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
Query: 467 Q 467
Q
Sbjct: 75 Q 75
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
+EI ++ + P V + G+Y + ++ME GG D ++ G E + A +++
Sbjct: 74 QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILR 131
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV-VGSP 194
I+ ++ HS +HRD+K N L G+ + DFG++ Q + VG+P
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTP 188
Query: 195 YYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+++APEV+ + Y + D+WS G+ L G PP +E K + L +++P
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF---LIPKNNP- 241
Query: 254 PSI----SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
P++ S K+ + L ++P R +A E+L H +I+ +
Sbjct: 242 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 282
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 80 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 136
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 191
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 310
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 311 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 342
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 80 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 136
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 191
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 310
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 311 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 342
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDD-----VWREIQIMHHLSEHPNVVQIK 94
F T Y K TN A K I KL R + D REI+++ LS HPN++ +
Sbjct: 23 FATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLL 78
Query: 95 GTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC---HSLGVMH 151
+ + LV + E ++ K + + + ++ ++G H ++H
Sbjct: 79 DAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSDVVGSPYYVAPEVLL--KHYGP 208
RDLKP N L D +G L DFGL+ F P + V + +Y APE+L + YG
Sbjct: 136 RDLKPNNLLLDENG---VLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGV 192
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSI------------ 256
+D+W+ G IL LL VP +++ +I + + WP +
Sbjct: 193 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 252
Query: 257 ------------SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLS 304
D DLI+ + +P RI+A + L + + P L
Sbjct: 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP----GPTPGCQLP 308
Query: 305 RLKHFCAMNKLKKM---ALRVIAERLSEEEIGGL 335
R C + LK+ AL + +R E GGL
Sbjct: 309 RPN--CPVETLKEQSNPALAIKRKRTEALEQGGL 340
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 78 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 134
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 135 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 189
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 249
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 250 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 308
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 309 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 340
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 73 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 129
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 184
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 303
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 304 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 335
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 74 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 130
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 185
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 304
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 305 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 336
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 67 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 123
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 124 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 178
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 238
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 239 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 297
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 298 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 329
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PTDQSFESR 330
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 70 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 126
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 181
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 300
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 301 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 332
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 79 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 135
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLA--RHTDDEM 190
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 309
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 310 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 341
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL V +
Sbjct: 109 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC---QVIQMELDHE 164
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 221
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 282 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 341 VIDPAKRISVDDALQHPYI 359
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 65 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDD 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 176
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 296 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 326
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIVDDTVAPDKPL 298
A + L H + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 70 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 126
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 181
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 300
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 301 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 332
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 75 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 131
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 186
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 305
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 306 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 337
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 91 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 147
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 202
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 321
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 322 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 353
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 68 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 123
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 124 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 175
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
+ VG+ Y++PE L HY + D+WS G+ L + G P + + S ++L
Sbjct: 176 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
Query: 243 QGKLDFESDPWPS--ISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
++ PS S +D + K L ++P R +++ H +I
Sbjct: 236 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 282
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIVDDTVAPDKPL 298
A + L H + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 70 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 126
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 181
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 300
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 301 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 332
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 72 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 128
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 129 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 184
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 245 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 303
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 304 VIDPAKRISVDDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 72 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 128
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 129 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 184
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 245 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 303
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 304 VIDPAKRISVDDALQHPYI 322
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 87 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 143
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 198
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 259 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 317
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 318 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 349
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 86 EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER-EAAKLIKTIVSVVEGC 144
E N V+ + + + E C L+D I ++ +R E +L + I+ +
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 145 HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-------------PGQY--LSD 189
HS G++HR+LKP N D + + DFGL+ PG L+
Sbjct: 133 HSQGIIHRNLKPXNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 190 VVGSPYYVAPEVL--LKHYGPEIDVWSAGVILYILLSGVPPFWAETES-GIFKQILQGKL 246
+G+ YVA EVL HY +ID +S G+I + + PF E I K++ +
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKLRSVSI 246
Query: 247 DFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWI 287
+F D + K +IR +++ DP +R A +L W+
Sbjct: 247 EFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 69 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 125
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 180
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 300 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 69 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 125
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 180
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 300 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 73 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 129
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLA--RHTDDEM 184
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 303
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 304 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 335
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 67 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 123
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 124 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 178
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 238
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 239 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 297
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 298 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 328
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 74 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 130
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 185
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 305 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 335
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 88 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 144
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 199
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 260 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 318
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 319 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 350
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
+EI ++ + P V + G+Y + ++ME GG D ++ G E + A +++
Sbjct: 54 QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILR 111
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSP 194
I+ ++ HS +HRD+K N L G+ + DFG++ Q + VG+P
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTP 168
Query: 195 YYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+++APEV+ + Y + D+WS G+ L G PP +E K + L +++P
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF---LIPKNNP- 221
Query: 254 PSI----SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDD 290
P++ S K+ + L ++P R +A E+L H +I+ +
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 88 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 144
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 199
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 260 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 318
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 319 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 350
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 64 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHER 120
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 121 -MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 176
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 237 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 295
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 296 VIDPAKRISVDDALQHPYI 314
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 18/222 (8%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
+EI ++ + P V + G+Y + ++ME GG D ++ G E + A +++
Sbjct: 69 QEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILR 126
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD-VVGSP 194
I+ ++ HS +HRD+K N L G+ + DFG++ Q + VG+P
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTP 183
Query: 195 YYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW 253
+++APEV+ + Y + D+WS G+ L G PP +E K + L +++P
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF---LIPKNNP- 236
Query: 254 PSI----SDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
P++ S K+ + L ++P R +A E+L H +I+ +
Sbjct: 237 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 87 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 143
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 198
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 259 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 317
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 318 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 349
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 70 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 126
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 127 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 182
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 242
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 243 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 301
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 302 VIDPAKRISVDDALQHPYI 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 65 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 122 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 177
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 237
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 238 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 296
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 297 VIDPAKRISVDDALQHPYI 315
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 73 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 129
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLA--RHTDDEM 184
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 303
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 304 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 335
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 91 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 147
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 202
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 321
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 322 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 353
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 66 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 122
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 177
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 297 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 327
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 64 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 120
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 121 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 176
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 237 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 295
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 296 VIDPAKRISVDDALQHPYI 314
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 74 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 130
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 185
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 304
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 305 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 336
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQI------KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + T E+ V+LVMEL +++ ER
Sbjct: 65 YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHER 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 122 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 177
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 237
Query: 226 -VPPFWAETESGIFKQILQGKLDFESDPWPSI----------------SDSAKDLIRKML 268
P F + + + + ++ + + +P + + A+DL+ KML
Sbjct: 238 PCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 296
Query: 269 ERDPRRRISAHEVLCHPWI 287
DP +RIS + L HP+I
Sbjct: 297 VIDPAKRISVDDALQHPYI 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 66 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 122
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 177
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 297 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 327
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 65 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 176
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 237 TPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 296 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 326
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 74 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 130
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 185
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 246 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 304
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 305 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 336
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 65 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMA 176
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 296 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 326
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 65 YRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ ++
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEMT 176
Query: 189 DVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ--- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 244 -------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISA 278
K++F ++ + + A DL+ KML D +RI+A
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 279 HEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
+ L H + DD D P D + SR
Sbjct: 296 AQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 326
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 33/257 (12%)
Query: 64 KLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGEL--FDR--I 119
K+ + YDD E+QI+ + ++ + +G + V+++ E + FD
Sbjct: 80 KISIKSKYDDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF 138
Query: 120 VAKGHYSEREAAKLIKTIVSVVEGCHSL-----GVMHRDLKPENFLFDTDGDDAKLMATD 174
V +Y+ ++IK I+ V S + HRD+KP N L D +G ++ +D
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG---RVKLSD 195
Query: 175 FGLSVFYKPGQYLSDVVGSPYYVAPEVLLK---HYGPEIDVWSAGVILYILLSGVPPF-- 229
FG S Y + + G+ ++ PE + G ++D+WS G+ LY++ V PF
Sbjct: 196 FGESE-YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
Query: 230 ---WAETESGIFKQILQGKLDFESDPWP-----------SISDSAKDLIRKMLERDPRRR 275
E + I + ++ LD +P +S+ D ++ L ++P R
Sbjct: 255 KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314
Query: 276 ISAHEVLCHPWIVDDTV 292
I++ + L H W+ D +
Sbjct: 315 ITSEDALKHEWLADTNI 331
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 88 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 144
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DFGL+ +
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA--RHTDDEM 199
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 260 GTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 318
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 319 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 350
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M + H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMK-VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + DA L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + DA L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G+I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F +D++ GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
+ E ++E++K+ D++NDGRIDY EF M+ E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE 161
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G+I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F FD++ GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
+ E ++E++K+ D++NDGRIDY E+ M+ E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEWLEFMKGVE 161
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G+I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F FD++ GYI ++EL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
+ E ++E++K+ D++NDGRIDY EF M+ E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE 161
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 391 FIAATLHLNKMEREENLIAAFSFF---DRDGSGYITIDELQQACKEFGLGEVP--LDEIV 445
+ AA L + ++ E AAF F DGS I+ EL + + G P L E++
Sbjct: 5 YKAAVEQLTEEQKNE-FKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 446 KEIDQDNDGRIDYGEFATMMRQSEGGVGKSRT 477
E+D+D G +D+ EF MM +S K +T
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKT 93
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L D+GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDYGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G+I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F FD++ GYI ++EL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMR 466
+ E ++E++K+ D++NDGRIDY EF M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F FD++ GYI ++EL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
+ E ++E++K+ D++NDGRIDY EF M+ E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE 161
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 391 FIAATLHLNKMEREENLIAAFSFFDRDGS-GYITIDELQQACKEFGLGEVP--LDEIVKE 447
+ AA L + ++ E AAF F G I+ EL + + G P L E++ E
Sbjct: 5 YKAAVEQLTEEQKNE-FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDE 63
Query: 448 IDQDNDGRIDYGEFATMM 465
+D+D G +D+ EF MM
Sbjct: 64 VDEDGSGTVDFDEFLVMM 81
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 105/226 (46%), Gaps = 42/226 (18%)
Query: 40 FGTTYLCIHKTTNAHFACKSI--PKRKLLCREDYDDVWREIQIMHHLSEHPNVVQI---- 93
FG + +K + ++A K I P R+L RE V RE++ + L EHP +V+
Sbjct: 18 FGVVFEAKNKVDDCNYAIKRIRLPNREL-AREK---VMREVKALAKL-EHPGIVRYFNAW 72
Query: 94 --KGTYED------SVFVHLVMELCAGGELFDRIVAKGHYSEREAA---KLIKTIVSVVE 142
K T E V++++ M+LC L D + + ERE + + I VE
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 143 GCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL-----------SVFYKPGQYLSDV- 190
HS G+MHRDLKP N F D D K+ DFGL +V Y
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTMD-DVVKV--GDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 191 -VGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETE 234
VG+ Y++PE + Y ++D++S G+IL+ LL PF + E
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME 232
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 63/275 (22%)
Query: 76 REIQIMHHLSEHPNVVQI--------------KGTYEDSVFVHLVMELCAGGELFDRIVA 121
REI+I+ L +H N+V++ G+ + V++V E ++
Sbjct: 57 REIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLE 113
Query: 122 KGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY 181
+G E A + ++ ++ HS V+HRDLKP N +T+ D L DFGL+
Sbjct: 114 QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE--DLVLKIGDFGLARIM 171
Query: 182 KPGQ----YLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETES 235
P +LS+ + + +Y +P +LL +Y ID+W+AG I +L+G F E
Sbjct: 172 DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE- 230
Query: 236 GIFKQILQGKLDFESDP--------------------------------WPSISDSAKDL 263
+ Q +L ES P P IS A D
Sbjct: 231 -----LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDF 285
Query: 264 IRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPL 298
+ ++L P R++A E L HP++ + D+P+
Sbjct: 286 LEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 49 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 104
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 156
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPPFWAETESGIFK 239
+ VG+ Y++PE L HY + D+WS G+ L + G +PP A+ +S
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPM 216
Query: 240 QILQGKLDF-ESDPWPSISDSA-----KDLIRKMLERDPRRRISAHEVLCHPWI 287
I + LD+ ++P P + +D + K L ++P R +++ H +I
Sbjct: 217 AIFE-LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 29/180 (16%)
Query: 134 IKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGS 193
I + V HSLG+ HRD+KP+N L ++ + KL DFG + P + + S
Sbjct: 147 IYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKL--CDFGSAKKLIPSEPSVAXICS 204
Query: 194 PYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-------- 243
+Y APE++L Y P ID+WS G + L+ G P F ET +I+Q
Sbjct: 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE 264
Query: 244 ---------GKLDF---ESDPWPSI-----SDSAKDLIRKMLERDPRRRISAHEVLCHPW 286
++ F ++ W I A DL+ ++L +P RI+ +E + HP+
Sbjct: 265 QMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTY-- 97
+G Y H T A K + + ++ +++ +EI ++ S H N+ G +
Sbjct: 37 YGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92
Query: 98 ------EDSVFVHLVMELCAGGELFDRIV-AKGHYSERE-AAKLIKTIVSVVEGCHSLGV 149
+D ++ LVME C G + D I KG+ + E A + + I+ + H V
Sbjct: 93 KNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV 150
Query: 150 MHRDLKPENFLFDTDGDDAKLMATDFGLSV-FYKPGQYLSDVVGSPYYVAPEVLLKHYGP 208
+HRD+K +N L ++A++ DFG+S + + +G+PY++APEV+ P
Sbjct: 151 IHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 209 EI------DVWSAGVILYILLSGVPPFW-AETESGIFKQILQGKLDFESDPWPSISDSAK 261
+ D+WS G+ + G PP +F +S W S +
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQ 264
Query: 262 DLIRKMLERDPRRRISAHEVLCHPWIVDDTVAPDKPLDSAVLSRLKHFCAMNKLKK 317
I L ++ +R + +++ HP+I D+P + V +LK K K+
Sbjct: 265 SFIESCLVKNHSQRPATEQLMKHPFIR------DQPNERQVRIQLKDHIDRTKKKR 314
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 144 CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-PGQYLSDVVGSPYYVAPEVL 202
CH V+HRDLKP+N L + G+ L DFGL+ P + + V + +Y P++L
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 203 L--KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSI---- 256
L Y +ID+W G I Y + +G P F T I + + WP I
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 257 -----------------------SDSAKDLIRKMLERDPRRRISAHEVLCHPWIV 288
SD A DL+ K+L+ + R RISA + + HP+ +
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGA-DLLTKLLQFEGRNRISAEDAMKHPFFL 286
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L FGL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILGFGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G+I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F D++ GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
+ E ++E++K+ D++NDGRIDY EF M+ E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE 161
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 321 RVIAERLSEEEIGGLKELFKM-IDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAAD 379
+ E+L+EE+ K F + + E G+I+ +EL ++ +G E++ ++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 380 IDNNGTIEYGEFIAATLHL----NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
D +GT+++ EF+ + +K + EE L F FD++ GYI +DEL+ + G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG 125
Query: 436 --LGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
+ E ++E++K+ D++NDGRIDY E M+ E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEXLEFMKGVE 161
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G +L + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L DF L+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFYLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L D GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDAGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 35/231 (15%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 52 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 107
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 108 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 159
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
++ VG+ Y++PE L HY + D+WS G+ L + G P IF+
Sbjct: 160 DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFEL-- 214
Query: 243 QGKLDF-ESDPWPSISDSA-----KDLIRKMLERDPRRRISAHEVLCHPWI 287
LD+ ++P P + + +D + K L ++P R +++ H +I
Sbjct: 215 ---LDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 262
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L D GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDRGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
S F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 74 VWREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSE 127
+RE++++ H+ +H NV+ + + E+ V+LV L G + IV ++
Sbjct: 68 TYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 128 REAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
LI I+ ++ HS ++HRDLKP N + +D +L D GL+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDGGLA--RHTDDEM 179
Query: 188 SDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ-- 243
+ V + +Y APE++L HY +D+WS G I+ LL+G F K IL+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 244 --------------------------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
K++F ++ + + A DL+ KML D +RI+
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 278 AHEVLCHPWIV-----DDTVAPDKPLDSAVLSR 305
A + L H + DD D P D + SR
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSFESR 330
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P +V + G + +V++ MEL GG L I G E A + + +E H+
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 183
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP---GQYLSD---VVGSPYYVAPEV 201
++H D+K +N L +DG A L DFG ++ +P G+ L + G+ ++APEV
Sbjct: 184 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 202 LL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
++ K ++D+WS+ ++ +L+G P W + G + + + PS +
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLT 300
Query: 261 KDLIRKMLERDPRRRISAHEV 281
I++ L ++P R SA E+
Sbjct: 301 AQAIQEGLRKEPVHRASAMEL 321
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHP-----NVVQIK 94
FG + H A K + K R+ + EI+I+ HL + NV+ +
Sbjct: 110 FGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHML 165
Query: 95 GTYEDSVFVHLVMELCAGG--ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHR 152
+ + + EL + EL + +G +S K +I+ ++ H ++H
Sbjct: 166 ENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 153 DLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEID 211
DLKPEN L G + DFG S + Q + + S +Y APEV+L YG ID
Sbjct: 225 DLKPENILLKQQGRSG-IKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGARYGMPID 281
Query: 212 VWSAGVILYILLSGVPPFWAETE 234
+WS G IL LL+G P E E
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDE 304
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P +V + G + +V++ MEL GG L I G E A + + +E H+
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP---GQYLSD---VVGSPYYVAPEV 201
++H D+K +N L +DG A L DFG ++ +P G+ L + G+ ++APEV
Sbjct: 186 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 202 LL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
++ K ++D+WS+ ++ +L+G P W + G + + + PS +
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLT 302
Query: 261 KDLIRKMLERDPRRRISAHEV 281
I++ L ++P R SA E+
Sbjct: 303 AQAIQEGLRKEPVHRASAMEL 323
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 88 PNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL 147
P +V + G + +V++ MEL GG L I G E A + + +E H+
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 148 GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKP---GQYLSD---VVGSPYYVAPEV 201
++H D+K +N L +DG A L DFG ++ +P G+ L + G+ ++APEV
Sbjct: 170 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 202 LL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSA 260
++ K ++D+WS+ ++ +L+G P W + G + + + PS +
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLT 286
Query: 261 KDLIRKMLERDPRRRISAHEV 281
I++ L ++P R SA E+
Sbjct: 287 AQAIQEGLRKEPVHRASAMEL 307
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKG-HYSEREAAKLIK 135
E+ + +HP V+++ +E+ ++L ELC G L A G E + ++
Sbjct: 106 EVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLR 164
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY 195
+ + HS G++H D+KP N G + DFGL V G P
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 196 YVAPEVLLKHYGPEIDVWSAGV-ILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWP 254
Y+APE+L YG DV+S G+ IL + + P E ++Q+ QG L E
Sbjct: 222 YMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLPPEFT--A 275
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCHP 285
+S + ++ MLE DP+ R +A +L P
Sbjct: 276 GLSSELRSVLVMMLEPDPKLRATAEALLALP 306
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHP-----NVVQIK 94
FG + H A K + K R+ + EI+I+ HL + NV+ +
Sbjct: 110 FGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHML 165
Query: 95 GTYEDSVFVHLVMELCAGG--ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHR 152
+ + + EL + EL + +G +S K +I+ ++ H ++H
Sbjct: 166 ENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 153 DLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEID 211
DLKPEN L G + DFG S + Q + + S +Y APEV+L YG ID
Sbjct: 225 DLKPENILLKQQGRSG-IKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGARYGMPID 281
Query: 212 VWSAGVILYILLSGVPPFWAETE 234
+WS G IL LL+G P E E
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDE 304
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHP-----NVVQIK 94
FG + H A K + K R+ + EI+I+ HL + NV+ +
Sbjct: 110 FGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHML 165
Query: 95 GTYEDSVFVHLVMELCAGG--ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHR 152
+ + + EL + EL + +G +S K +I+ ++ H ++H
Sbjct: 166 ENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 153 DLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEID 211
DLKPEN L G + DFG S + Q + + S +Y APEV+L YG ID
Sbjct: 225 DLKPENILLKQQGRSG-IKVIDFGSSCYEH--QRVYXXIQSRFYRAPEVILGARYGMPID 281
Query: 212 VWSAGVILYILLSGVPPFWAETE 234
+WS G IL LL+G P E E
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDE 304
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 126/313 (40%), Gaps = 72/313 (23%)
Query: 40 FGTTYLCI-HKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL-SEHPN----VVQI 93
FG CI HK H A K + C + EIQ++ HL + PN VQ+
Sbjct: 27 FGKVVECIDHKAGGRHVAVKIVKNVDRYC----EAARSEIQVLEHLNTTDPNSTFRCVQM 82
Query: 94 KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVEGCHSLGVMH 151
+E + +V EL G +D I G R K+ I V HS + H
Sbjct: 83 LEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTH 141
Query: 152 RDLKPENFLF-DTDGDDA---------------KLMATDFGLSVFYKPGQYLSDVVGSPY 195
DLKPEN LF +D +A + DFG + + ++ S +V + +
Sbjct: 142 TDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLVSTRH 199
Query: 196 YVAPEVLLK-HYGPEIDVWSAGVIL---YILLSGVPPFWAETESGIFKQIL--------- 242
Y APEV+L + DVWS G IL Y+ + P ++ + ++IL
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ 259
Query: 243 ---------QGKLDFE--SDPWPSISDSAK-----------------DLIRKMLERDPRR 274
+LD++ S +S + K DLI+KMLE DP +
Sbjct: 260 KTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319
Query: 275 RISAHEVLCHPWI 287
RI+ E L HP+
Sbjct: 320 RITLREALKHPFF 332
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 46/311 (14%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y +G + T A K IP + RE++I+ H +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHF-K 111
Query: 87 HPNVVQIKGTYEDSV------FVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
H N++ IK +V V++V++L +L I + + + ++
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRG 170
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS--VFYKPGQ---YLSDVVGSPY 195
++ HS V+HRDLKP N L + ++ +L DFG++ + P + ++++ V + +
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 196 YVAPEVLLK--HYGPEIDVWSAG-----------------------VILYILLSGVPPFW 230
Y APE++L Y ID+WS G +I+ +L + P
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 231 AETESGIFKQILQGKLDFESDPW----PSISDSAKDLIRKMLERDPRRRISAHEVLCHPW 286
+ + +Q + PW P A L+ +ML +P RISA L HP+
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347
Query: 287 IVDDTVAPDKP 297
+ D+P
Sbjct: 348 LAKYHDPDDEP 358
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 53/262 (20%)
Query: 65 LLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL----VMELCAGGELFDRIV 120
LC+ V REI++++H HPN++ ++ +FVH + +L EL +
Sbjct: 71 FLCKR----VLREIRLLNHF-HHPNILGLR-----DIFVHFEEPAMHKLYLVTELMRTDL 120
Query: 121 AKGHYSER---EAAKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATD 174
A+ + +R + + ++ G H L GV+HRDL P N L D+ + D
Sbjct: 121 AQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDITICD 177
Query: 175 FGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAE 232
F L+ + V +Y APE+++ K + +D+WSAG ++ + + F
Sbjct: 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
Query: 233 TESGIFKQILQ--GKLDFE-----SDP-----------------W----PSISDSAKDLI 264
T +I++ G E S P W P+ A DLI
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI 297
Query: 265 RKMLERDPRRRISAHEVLCHPW 286
KMLE +P+RRIS + L HP+
Sbjct: 298 AKMLEFNPQRRISTEQALRHPY 319
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 53/262 (20%)
Query: 65 LLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHL----VMELCAGGELFDRIV 120
LC+ V REI++++H HPN++ ++ +FVH + +L EL +
Sbjct: 71 FLCKR----VLREIRLLNHF-HHPNILGLR-----DIFVHFEEPAMHKLYLVTELMRTDL 120
Query: 121 AKGHYSER---EAAKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATD 174
A+ + +R + + ++ G H L GV+HRDL P N L D+ + D
Sbjct: 121 AQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDITICD 177
Query: 175 FGLSVFYKPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAE 232
F L+ + V +Y APE+++ K + +D+WSAG ++ + + F
Sbjct: 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
Query: 233 TESGIFKQILQ--GKLDFE-----SDP-----------------W----PSISDSAKDLI 264
T +I++ G E S P W P+ A DLI
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI 297
Query: 265 RKMLERDPRRRISAHEVLCHPW 286
KMLE +P+RRIS + L HP+
Sbjct: 298 AKMLEFNPQRRISTEQALRHPY 319
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+ ++E F + D D +GTI +ELKV + +G + + EIK + D + G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 387 EYGEFIAA-TLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
+G+F+ T ++ + +E ++ AF FD D +G I+ L++ KE G L + L E
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQS 468
+ E D+D DG + EF + +++
Sbjct: 145 XIDEADRDGDGEVSEQEFLRIXKKT 169
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 62/280 (22%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 72 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 128
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 129 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 184
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 244
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 304
Query: 270 RDPRRRISAHEVLCHPWI---VDDTVA-------PDKPLD 299
D +RIS E L HP+I D + A PDK LD
Sbjct: 305 IDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLD 344
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 46/311 (14%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D Y +G + T A K IP + RE++I+ H +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHF-K 112
Query: 87 HPNVVQIKGTYEDSV------FVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSV 140
H N++ IK +V V++V++L +L I + + + ++
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRG 171
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS--VFYKPGQ---YLSDVVGSPY 195
++ HS V+HRDLKP N L + ++ +L DFG++ + P + ++++ V + +
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 196 YVAPEVLLK--HYGPEIDVWSAG-----------------------VILYILLSGVPPFW 230
Y APE++L Y ID+WS G +I+ +L + P
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 231 AETESGIFKQILQGKLDFESDPW----PSISDSAKDLIRKMLERDPRRRISAHEVLCHPW 286
+ + +Q + PW P A L+ +ML +P RISA L HP+
Sbjct: 289 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 348
Query: 287 IVDDTVAPDKP 297
+ D+P
Sbjct: 349 LAKYHDPDDEP 359
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 125/313 (39%), Gaps = 72/313 (23%)
Query: 40 FGTTYLCI-HKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHL-SEHPN----VVQI 93
FG CI HK H A K + C + EIQ++ HL + PN VQ+
Sbjct: 27 FGKVVECIDHKAGGRHVAVKIVKNVDRYC----EAARSEIQVLEHLNTTDPNSTFRCVQM 82
Query: 94 KGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVEGCHSLGVMH 151
+E + +V EL G +D I G R K+ I V HS + H
Sbjct: 83 LEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTH 141
Query: 152 RDLKPENFLF-DTDGDDA---------------KLMATDFGLSVFYKPGQYLSDVVGSPY 195
DLKPEN LF +D +A + DFG + + ++ S +V +
Sbjct: 142 TDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLVXXRH 199
Query: 196 YVAPEVLLK-HYGPEIDVWSAGVIL---YILLSGVPPFWAETESGIFKQIL--------- 242
Y APEV+L + DVWS G IL Y+ + P ++ + ++IL
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ 259
Query: 243 ---------QGKLDFE--SDPWPSISDSAK-----------------DLIRKMLERDPRR 274
+LD++ S +S + K DLI+KMLE DP +
Sbjct: 260 KTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319
Query: 275 RISAHEVLCHPWI 287
RI+ E L HP+
Sbjct: 320 RITLREALKHPFF 332
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 52/258 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 304 IDASKRISVDEALQHPYI 321
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV----FVHLVMELCAGGELFDRIVAKGHYSEREAA 131
RE Q L+ HP +V + T E ++VME G L D + +G + + A
Sbjct: 61 REAQNAAALN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 132 KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSD- 189
++I + H G++HRD+KP N + + K+M DFG++ G ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVM--DFGIARAIADSGNSVTQT 176
Query: 190 --VVGSPYYVAPEVLLKHYGPEI----DVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
V+G+ Y++PE + G + DV+S G +LY +L+G PPF ++ + Q ++
Sbjct: 177 AAVIGTAQYLSPE---QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 244 GKLDFESDPWP------SISDSAKDLIRKMLERDPRRR 275
DP P +S ++ K L ++P R
Sbjct: 234 ------EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
E + + RE+ IM +L+ HPN+V++ G + +VME G+L+ R++ K H +
Sbjct: 65 EKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 129 EAA-KLIKTIVSVVEGCHSLG--VMHRDLKPENFLFDTDGDDAKLMA--TDFGLSVFYKP 183
+L+ I +E + ++HRDL+ N + ++A + A DFGLS +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQS 179
Query: 184 GQYLSDVVGSPYYVAPEVL---LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQ 240
+S ++G+ ++APE + + Y + D +S +ILY +L+G G F +
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDE 230
Query: 241 ILQGKLDF-----ESDPWPSISDSAKDLIRKMLER----DPRRR 275
GK+ F E P+I + +R ++E DP++R
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 62/280 (22%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 73 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 129
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ +
Sbjct: 130 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMV 185
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVILYILLSGVPPF--------WAE------T 233
V + YY APEV+L Y +D+WS G I+ ++ G F W + T
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 245
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 246 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 305
Query: 270 RDPRRRISAHEVLCHPWI---VDDTVA-------PDKPLD 299
D +RIS E L HP+I D + A PDK LD
Sbjct: 306 IDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLD 345
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV----FVHLVMELCAGGELFDRIVAKGHYSEREAA 131
RE Q L+ HP +V + T E ++VME G L D + +G + + A
Sbjct: 61 REAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 132 KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSD- 189
++I + H G++HRD+KP N + + K+M DFG++ G ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVM--DFGIARAIADSGNSVTQT 176
Query: 190 --VVGSPYYVAPEVLLKHYGPEI----DVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
V+G+ Y++PE + G + DV+S G +LY +L+G PPF ++ + Q ++
Sbjct: 177 AAVIGTAQYLSPE---QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR 233
Query: 244 GKLDFESDPWP------SISDSAKDLIRKMLERDPRRR 275
DP P +S ++ K L ++P R
Sbjct: 234 ------EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV----FVHLVMELCAGGELFDRIVAKGHYSEREAA 131
RE Q L+ HP +V + T E ++VME G L D + +G + + A
Sbjct: 61 REAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 132 KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSD- 189
++I + H G++HRD+KP N + + K+M DFG++ G ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVM--DFGIARAIADSGNSVTQT 176
Query: 190 --VVGSPYYVAPEVLLKHYGPEI----DVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
V+G+ Y++PE + G + DV+S G +LY +L+G PPF ++ + Q ++
Sbjct: 177 AAVIGTAQYLSPE---QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 244 GKLDFESDPWP------SISDSAKDLIRKMLERDPRRR 275
DP P +S ++ K L ++P R
Sbjct: 234 ------EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV----FVHLVMELCAGGELFDRIVAKGHYSEREAA 131
RE Q L+ HP +V + T E ++VME G L D + +G + + A
Sbjct: 61 REAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 132 KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSD- 189
++I + H G++HRD+KP N + + K+M DFG++ G ++
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVM--DFGIARAIADSGNSVTQT 176
Query: 190 --VVGSPYYVAPEVLLKHYGPEI----DVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
V+G+ Y++PE + G + DV+S G +LY +L+G PPF ++ + Q ++
Sbjct: 177 AAVIGTAQYLSPE---QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 244 GKLDFESDPWP------SISDSAKDLIRKMLERDPRRR 275
DP P +S ++ K L ++P R
Sbjct: 234 ------EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV----FVHLVMELCAGGELFDRIVAKGHYSEREAA 131
RE Q L+ HP +V + T E ++VME G L D + +G + + A
Sbjct: 78 REAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 136
Query: 132 KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYLSD- 189
++I + H G++HRD+KP N + + K+M DFG++ G ++
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVM--DFGIARAIADSGNSVTQT 193
Query: 190 --VVGSPYYVAPEVLLKHYGPEI----DVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
V+G+ Y++PE + G + DV+S G +LY +L+G PPF ++ + Q ++
Sbjct: 194 AAVIGTAQYLSPE---QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 250
Query: 244 GKLDFESDPWP------SISDSAKDLIRKMLERDPRRR 275
DP P +S ++ K L ++P R
Sbjct: 251 ------EDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV----FVHLVMELCAGGELFDRIVAKGHYSEREAA 131
RE Q L+ HP +V + T E ++VME G L D + +G + + A
Sbjct: 61 REAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 132 KLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQYL--- 187
++I + H G++HRD+KP N L + DFG++ G +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATN---AVKVVDFGIARAIADSGNSVXQT 176
Query: 188 SDVVGSPYYVAPEVLLKHYGPEI----DVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
+ V+G+ Y++PE + G + DV+S G +LY +L+G PPF ++ + Q ++
Sbjct: 177 AAVIGTAQYLSPE---QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 244 GKLDFESDPWP------SISDSAKDLIRKMLERDPRRR 275
DP P +S ++ K L ++P R
Sbjct: 234 ------EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 42/252 (16%)
Query: 63 RKLLCREDYDD--VWREIQIMHHLSEHPNVVQIKGTYE---------DSVFVHLVMELCA 111
++LL E+ + + +E+ M LS HPN+VQ + F+ L+ ELC
Sbjct: 59 KRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL-LLTELCK 117
Query: 112 GG--ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG--VMHRDLKPENFLFDTDGDD 167
G E ++ ++G S K+ V+ H ++HRDLK EN L G
Sbjct: 118 GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT- 176
Query: 168 AKLMATDFG--LSVFYKPGQYLS-----------DVVGSPYYVAPEV--LLKHY--GPEI 210
+ DFG ++ + P S +P Y PE+ L ++ G +
Sbjct: 177 --IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 211 DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLER 270
D+W+ G ILY+L PF E G +I+ GK + P + LIR ML+
Sbjct: 235 DIWALGCILYLLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQV 288
Query: 271 DPRRRISAHEVL 282
+P R+S EV+
Sbjct: 289 NPEERLSIAEVV 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 68 REDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-------- 119
++D+ D E++++ L HPN++ + G E +++L +E G L D +
Sbjct: 56 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 115
Query: 120 -----VAKGHYSEREAAKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLM 171
+A S + +L+ V G L +HRDL N L G++
Sbjct: 116 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAK 172
Query: 172 ATDFGLSVFYKPGQ--YLSDVVGS--PYYVAPEVL-LKHYGPEIDVWSAGVILYILLS-G 225
DFGLS GQ Y+ +G ++A E L Y DVWS GV+L+ ++S G
Sbjct: 173 IADFGLS----RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 228
Query: 226 VPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
P+ T + +++++ QG + + + D DL+R+ P R S ++L
Sbjct: 229 GTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 68 REDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-------- 119
++D+ D E++++ L HPN++ + G E +++L +E G L D +
Sbjct: 66 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 125
Query: 120 -----VAKGHYSEREAAKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLM 171
+A S + +L+ V G L +HRDL N L G++
Sbjct: 126 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAK 182
Query: 172 ATDFGLSVFYKPGQ--YLSDVVGS--PYYVAPEVL-LKHYGPEIDVWSAGVILYILLS-G 225
DFGLS GQ Y+ +G ++A E L Y DVWS GV+L+ ++S G
Sbjct: 183 IADFGLS----RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 238
Query: 226 VPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
P+ T + +++++ QG + + + D DL+R+ P R S ++L
Sbjct: 239 GTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 24/179 (13%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L D+++ + E
Sbjct: 59 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEI- 115
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V+ G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 116 -LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 166
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPPFWAETESGIF 238
+ VG+ Y+APE L HY + D+WS G+ L L G +PP A+ IF
Sbjct: 167 DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGEL--FDRIVAKGHYSEREAAKLI 134
E IM EHPN+++++G +S+ V ++ E G L F R+ G ++ + ++
Sbjct: 65 EASIMGQF-EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGML 122
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ----YLSDV 190
+ I S + + +HRDL N L ++ + +DFGLS F + Y S +
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 191 VGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQGKL 246
G P + APE + + + D WS G++++ ++S G P+W + + I Q
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ--- 236
Query: 247 DFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
D+ P P S L+ ++D R +V+
Sbjct: 237 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 272
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
E + + RE+ IM +L+ HPN+V++ G + +VME G+L+ R++ K H +
Sbjct: 65 EKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 129 EAA-KLIKTIVSVVEGCHSLG--VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ 185
+L+ I +E + ++HRDL+ N + ++A + A S+ +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH 181
Query: 186 YLSDVVGSPYYVAPEVL---LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQIL 242
+S ++G+ ++APE + + Y + D +S +ILY +L+G G F +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYS 232
Query: 243 QGKLDF-----ESDPWPSISDSAKDLIRKMLER----DPRRR 275
GK+ F E P+I + +R ++E DP++R
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 62/280 (22%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ +
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMME 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSGVPPF--WAE------T 233
V + YY APEV+L Y +D+WS G I+ IL G W + T
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
Query: 234 ESGIFKQILQGKLD--FESDP----------WPSI------------SDSAKDLIRKMLE 269
F + LQ + E+ P +P + + A+DL+ KML
Sbjct: 244 PCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 270 RDPRRRISAHEVLCHPWI---VDDTVA-------PDKPLD 299
D +RIS E L HP+I D + A PDK LD
Sbjct: 304 IDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLD 343
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 65 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 121
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 122 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 177
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 237
Query: 226 -VPPFWAETESGI--------------FKQILQGKLDFESDPWPS--ISDSAKDLIRKML 268
P F + + + F+++ L F +D + + A+DL+ KML
Sbjct: 238 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL-FPADSEHNKLKASQARDLLSKML 296
Query: 269 ERDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 297 VIDASKRISVDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 54/259 (20%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 76 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 132
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ ++
Sbjct: 133 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 188
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 189 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 248
Query: 226 -VPPFWAETESGI--------------FKQILQGKLDFESDPWPS--ISDSAKDLIRKML 268
P F + + + F+++ L F +D + + A+DL+ KML
Sbjct: 249 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL-FPADSEHNKLKASQARDLLSKML 307
Query: 269 ERDPRRRISAHEVLCHPWI 287
D +RIS E L HP+I
Sbjct: 308 VIDASKRISVDEALQHPYI 326
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 31/224 (13%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
E + + RE+ IM +L+ HPN+V++ G + +VME G+L+ R++ K H +
Sbjct: 65 EKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 129 EAA-KLIKTIVSVVEGCHSLG--VMHRDLKPENFLFDTDGDDAKLMA--TDFGLSVFYKP 183
+L+ I +E + ++HRDL+ N + ++A + A DFG S +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--QQS 179
Query: 184 GQYLSDVVGSPYYVAPEVL---LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQ 240
+S ++G+ ++APE + + Y + D +S +ILY +L+G G F +
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDE 230
Query: 241 ILQGKLDF-----ESDPWPSISDSAKDLIRKMLER----DPRRR 275
GK+ F E P+I + +R ++E DP++R
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L EE+ + E F + D + G + + ELKV +K +G +L + EI L+D D + +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 387 EYGEF-IAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
+Y +F I + K + + + AF FD D +G I+I L++ KE G L + L
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQS 468
+++E D D DG I+ EF + S
Sbjct: 137 MIEEFDLDGDGEINENEFIAICTDS 161
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G+ +HK + A K I R + ++ + ++ ++ S+ P +VQ G
Sbjct: 35 YGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR 92
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYS-------EREAAKL-IKTIVSVVEGCHSLGVMH 151
+ MEL + FD+ K YS E K+ + T+ ++ +L ++H
Sbjct: 93 EGDCWICMELMSTS--FDKFY-KYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV-----VGSPYYVAPEVL---- 202
RD+KP N L D G+ + DFG+S GQ + + G Y+APE +
Sbjct: 150 RDIKPSNILLDRSGN---IKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 203 -LKHYGPEIDVWSAGVILYILLSGVPPF--WAETESGIFKQILQGKLDFESDPWPSISDS 259
+ Y DVWS G+ LY L +G P+ W + +F Q+ Q + DP P +S+S
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKW----NSVFDQLTQV---VKGDP-PQLSNS 253
Query: 260 AK--------DLIRKMLERDPRRRISAHEVLCHPWIV 288
+ + + L +D +R E+L HP+I+
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL 290
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 48 HKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVH--L 105
HK T FA K L D RE +++ L+ H N+V++ E++ H L
Sbjct: 30 HKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVL 86
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFD 162
+ME C G L+ + + ++ + + VV G + L G++HR++KP N +
Sbjct: 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM-R 145
Query: 163 TDGDDAKLM--ATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL---------LKHYGPEID 211
G+D + + TDFG + + + + G+ Y+ P++ K YG +D
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205
Query: 212 VWSAGVILYILLSGVPPF 229
+WS GV Y +G PF
Sbjct: 206 LWSIGVTFYHAATGSLPF 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 48 HKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVH--L 105
HK T FA K L D RE +++ L+ H N+V++ E++ H L
Sbjct: 30 HKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVL 86
Query: 106 VMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFD 162
+ME C G L+ + + ++ + + VV G + L G++HR++KP N +
Sbjct: 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM-R 145
Query: 163 TDGDDAKLM--ATDFGLSVFYKPGQYLSDVVGSPYYVAPEVL---------LKHYGPEID 211
G+D + + TDFG + + + + G+ Y+ P++ K YG +D
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205
Query: 212 VWSAGVILYILLSGVPPF 229
+WS GV Y +G PF
Sbjct: 206 LWSIGVTFYHAATGSLPF 223
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
D+ ++E Q M LS HP +V+ G +++V E + G L + + + H E +
Sbjct: 48 DEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPS 104
Query: 132 KLIKTIVSVVEG---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+L++ V EG S +HRDL N L D D + +DFG++ + QY+S
Sbjct: 105 QLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD---LCVKVSDFGMTRYVLDDQYVS 161
Query: 189 DVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQ 243
V G+ + + APEV Y + DVW+ G++++ + S G P+ T S + ++ Q
Sbjct: 162 SV-GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
Query: 244 GKLDFESDPWPSI-SDSAKDLIRKMLERDPRRRISAHEVL 282
G + P + SD+ ++ P +R + ++L
Sbjct: 221 GHRLYR----PHLASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREA 130
DD E ++M LS HP +VQ+ G + + LV E G L D + +G ++ A
Sbjct: 67 DDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---A 122
Query: 131 AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ + V EG L V+HRDL N L G++ + +DFG++ F QY
Sbjct: 123 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT 179
Query: 188 SDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
S G+ + + +PEV Y + DVWS GV+++ + S +
Sbjct: 180 SST-GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS------------------E 220
Query: 244 GKLDFESDPWPSISDSAKDLIRKMLERDPR-RRISAHEVLCHPWIVDDTVAPDKPLDSAV 302
GK+ +E+ S S+ +D+ PR ++++ H W ++P D
Sbjct: 221 GKIPYENR---SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPA 270
Query: 303 LSRL 306
SRL
Sbjct: 271 FSRL 274
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 68 REDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-------- 119
++D+ D E++++ L HPN++ + G E +++L +E G L D +
Sbjct: 63 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 122
Query: 120 -----VAKGHYSEREAAKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLM 171
+A S + +L+ V G L +HR+L N L G++
Sbjct: 123 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILV---GENYVAK 179
Query: 172 ATDFGLSVFYKPGQ--YLSDVVGS--PYYVAPEVL-LKHYGPEIDVWSAGVILYILLS-G 225
DFGLS GQ Y+ +G ++A E L Y DVWS GV+L+ ++S G
Sbjct: 180 IADFGLS----RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 235
Query: 226 VPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVL 282
P+ T + +++++ QG + + + D DL+R+ P R S ++L
Sbjct: 236 GTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 111 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 166
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 167 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 218
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPP 228
+ VG+ Y++PE L HY + D+WS G+ L + G +PP
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 76 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 131
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 132 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 183
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPP 228
+ VG+ Y++PE L HY + D+WS G+ L + G +PP
Sbjct: 184 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 64/281 (22%)
Query: 75 WREIQIMHHLSEHPNVVQIKGTY------EDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+RE+ +M ++ H N++ + + E+ V++VMEL +++ ER
Sbjct: 71 YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER 127
Query: 129 EAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLS 188
+ L+ ++ ++ HS G++HRDLKP N + + D L DFGL+ +
Sbjct: 128 -MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMME 183
Query: 189 DVVGSPYYVAPEVLLKH-YGPEIDVWSAGVIL------YILLSG---------------- 225
V + YY APEV+L Y +D+WS G I+ IL G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
Query: 226 -VPPFWAETESGI--------------FKQILQGKLDFESDPWPS--ISDSAKDLIRKML 268
P F + + + F+++ L F +D + + A+DL+ KML
Sbjct: 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL-FPADSEHNKLKASQARDLLSKML 302
Query: 269 ERDPRRRISAHEVLCHPWI---VDDTVA-------PDKPLD 299
D +RIS E L HP+I D + A PDK LD
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLD 343
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREA 130
+D E ++M LS HP +VQ+ G + + LV E G L D + +G ++ A
Sbjct: 47 EDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---A 102
Query: 131 AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ + V EG L V+HRDL N L G++ + +DFG++ F QY
Sbjct: 103 ETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT 159
Query: 188 SDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
S G+ + + +PEV Y + DVWS GV+++ + S +
Sbjct: 160 SST-GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS------------------E 200
Query: 244 GKLDFESDPWPSISDSAKDLIRKMLERDPR-RRISAHEVLCHPWIVDDTVAPDKPLDSAV 302
GK+ +E+ S S+ +D+ PR ++++ H W ++P D
Sbjct: 201 GKIPYENR---SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPA 250
Query: 303 LSRL 306
SRL
Sbjct: 251 FSRL 254
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 38/241 (15%)
Query: 68 REDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMEL---CAGGELFDRIVAKGH 124
+E+ + ++ ++ + P +VQ GT+ + V + MEL CA +L R+ +G
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAE-KLKKRM--QGP 120
Query: 125 YSEREAAKLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
ER K+ V++V+ + L GV+HRD+KP N L D G ++ DFG+S
Sbjct: 121 IPERILGKMT---VAIVKALYYLKEKHGVIHRDVKPSNILLDERG---QIKLCDFGISGR 174
Query: 181 YKPGQYLSDVVGSPYYVAPEVL------LKHYGPEIDVWSAGVILYILLSGVPPFW-AET 233
+ G Y+APE + Y DVWS G+ L L +G P+ +T
Sbjct: 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT 234
Query: 234 ESGIFKQILQ-------GKLDFESDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPW 286
+ + ++LQ G + F D + ++ L +D R+R +++L H +
Sbjct: 235 DFEVLTKVLQEEPPLLPGHMGFSGD--------FQSFVKDCLTKDHRKRPKYNKLLEHSF 286
Query: 287 I 287
I
Sbjct: 287 I 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC-- 144
HPN+V++ G + V LVME GG L++ + AA + + +G
Sbjct: 61 HPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 145 -HSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
HS+ ++HRDLKP N L G K+ DFG + + ++++ GS ++APE
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKI--CDFGTACDIQ--THMTNNKGSAAWMAPE 174
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW-PSISD 258
V +Y + DV+S G+IL+ +++ PF + G +I+ + P ++
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPK 232
Query: 259 SAKDLIRKMLERDPRRRISAHEVL 282
+ L+ + +DP +R S E++
Sbjct: 233 PIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC-- 144
HPN+V++ G + V LVME GG L++ + AA + + +G
Sbjct: 60 HPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 145 -HSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
HS+ ++HRDLKP N L G K+ DFG + + ++++ GS ++APE
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKI--CDFGTACDIQ--THMTNNKGSAAWMAPE 173
Query: 201 VLL-KHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPW-PSISD 258
V +Y + DV+S G+IL+ +++ PF + G +I+ + P ++
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPK 231
Query: 259 SAKDLIRKMLERDPRRRISAHEVL 282
+ L+ + +DP +R S E++
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREA 130
+D E ++M LS HP +VQ+ G + + LV E G L D + +G ++ A
Sbjct: 47 EDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---A 102
Query: 131 AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ + V EG L V+HRDL N L G++ + +DFG++ F QY
Sbjct: 103 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT 159
Query: 188 SDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
S G+ + + +PEV Y + DVWS GV+++ + S +
Sbjct: 160 SST-GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS------------------E 200
Query: 244 GKLDFESDPWPSISDSAKDLIRKMLERDPR-RRISAHEVLCHPWIVDDTVAPDKPLDSAV 302
GK+ +E+ S S+ +D+ PR ++++ H W ++P D
Sbjct: 201 GKIPYENR---SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPA 250
Query: 303 LSRL 306
SRL
Sbjct: 251 FSRL 254
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 326 RLSEEEIGGLKELFKMIDTDE-SGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
+LS ++ L+ F+ +T E SG ++ +++ + L+ +G Q +S I+ L+D D NG
Sbjct: 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNG 65
Query: 385 TIEYGEF--IAATL---HLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LG 437
I++ F I A +N + ++ L AF +D++G+GYI+ D +++ E L
Sbjct: 66 DIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLS 125
Query: 438 EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
LD ++ EID D G +D+ EF +M
Sbjct: 126 SEDLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 313 NKLKKMALRVIAERLSEEEIGG-LKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEI 371
+ K + R + E ++ E++ L+E F++ D + +G I+ + ++ L + L ++
Sbjct: 70 DSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
Query: 372 KALMDAADIDNNGTIEYGEFIAA 394
A++D D D +GT+++ EF+
Sbjct: 130 DAMIDEIDADGSGTVDFEEFMGV 152
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREA 130
+D E ++M LS HP +VQ+ G + + LV E G L D + +G ++ A
Sbjct: 45 EDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---A 100
Query: 131 AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ + V EG L V+HRDL N L G++ + +DFG++ F QY
Sbjct: 101 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT 157
Query: 188 SDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
S G+ + + +PEV Y + DVWS GV+++ + S +
Sbjct: 158 SST-GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS------------------E 198
Query: 244 GKLDFESDPWPSISDSAKDLIRKMLERDPR-RRISAHEVLCHPWIVDDTVAPDKPLDSAV 302
GK+ +E+ S S+ +D+ PR ++++ H W ++P D
Sbjct: 199 GKIPYENR---SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW-------KERPEDRPA 248
Query: 303 LSRL 306
SRL
Sbjct: 249 FSRL 252
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 312 MNKLKKMALRVIAER---LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLME 368
M K LR ++ + L EEI L+E F+ D D+ G I +L ++ +G E
Sbjct: 1 MGNCVKYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE 60
Query: 369 SEIKALMDAADIDNNGTIEYGEFIAAT-----LHLNKMEREENLIAAFSFFDRDGSGYIT 423
E+ L +++ G +++ +F+ M + L AF FD +G G I+
Sbjct: 61 MELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 120
Query: 424 IDELQQACKEF---GLGEVPLDEIVKEIDQDNDGRIDYGEFATMM 465
EL++A ++ +G ++EI++++D + DGR+D+ EF MM
Sbjct: 121 TSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGEL--FDRIVAKGHYSEREAAKLI 134
E IM EHPN+++++G +S+ V ++ E G L F R+ G ++ + ++
Sbjct: 67 EASIMGQF-EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGML 124
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK-----PGQYLSD 189
+ I S + + +HRDL N L ++ + +DFGLS F + P + S
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 190 VVGSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQGKL 246
P + APE + + + D WS G++++ ++S G P+W + + I Q
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ--- 238
Query: 247 DFESDPWPSISDSAKDLIRKMLERDPRRR 275
D+ P P S L+ ++D R
Sbjct: 239 DYRLPPPPDCPTSLHQLMLDCWQKDRNAR 267
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 49 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 104
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 156
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPP 228
+ VG+ Y++PE L HY + D+WS G+ L + G +PP
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 49 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 104
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 156
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPP 228
+ VG+ Y++PE L HY + D+WS G+ L + G +PP
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 49 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 104
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 156
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPP 228
+ VG+ Y++PE L HY + D+WS G+ L + G +PP
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREA 130
+D E ++M LS HP +VQ+ G + + LV E G L D + +G ++ A
Sbjct: 50 EDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---A 105
Query: 131 AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ + V EG L V+HRDL N L G++ + +DFG++ F QY
Sbjct: 106 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT 162
Query: 188 SDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQIL 242
S G+ + + +PEV Y + DVWS GV+++ + S G P+ + S + + I
Sbjct: 163 SST-GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 221
Query: 243 QG 244
G
Sbjct: 222 TG 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
+ + RE+Q++H + P +V G + + + ME GG L + G E+
Sbjct: 49 NQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--- 104
Query: 132 KLIKTIVSVVEGCHSL----GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L K ++V++G L +MHRD+KP N L ++ G+ + DFG+S GQ +
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLI 156
Query: 188 ----SDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSG---VPP 228
+ VG+ Y++PE L HY + D+WS G+ L + G +PP
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREA 130
+D E ++M LS HP +VQ+ G + + LV E G L D + +G ++ A
Sbjct: 48 EDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFA---A 103
Query: 131 AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYL 187
L+ + V EG L V+HRDL N L G++ + +DFG++ F QY
Sbjct: 104 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT 160
Query: 188 SDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQIL 242
S G+ + + +PEV Y + DVWS GV+++ + S G P+ + S + + I
Sbjct: 161 SST-GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 219
Query: 243 QG 244
G
Sbjct: 220 TG 221
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 332 IGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYGEF 391
I GL F+ +D D S ++ +E + GL ++G L ++E + + D + +GT++ EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 392 IAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQ-----QACKEFGLGEVPLDEIVK 446
+ A RE + AAF+ DR G G +T+D+L+ +A + GE DE+++
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 447 EI-----DQDNDGRIDYGEF 461
+ DG++ EF
Sbjct: 156 RFLDNFDSSEKDGQVTLAEF 175
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 330 EEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYG 389
+EI L + FK +D D SG+++ EE + L + + ++ ++D D D NG +++
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 72
Query: 390 EFIAATLHLN-KMEREENLIAAFSFFDRDGSGYITIDELQQACKEF---GLGEVPLDEIV 445
EFI + K ++E+ L AF +D D GYI+ EL Q K L + L +IV
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 132
Query: 446 KEI----DQDNDGRIDYGEFATMM 465
+ D+D DGRI + EF ++
Sbjct: 133 DKTIINADKDGDGRISFEEFCAVV 156
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 330 EEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYG 389
+EI L + FK +D D SG+++ EE + L + + ++ ++D D D NG +++
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 73
Query: 390 EFIAATLHLN-KMEREENLIAAFSFFDRDGSGYITIDELQQACKEF---GLGEVPLDEIV 445
EFI + K ++E+ L AF +D D GYI+ EL Q K L + L +IV
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133
Query: 446 KEI----DQDNDGRIDYGEFATMM 465
+ D+D DGRI + EF ++
Sbjct: 134 DKTIINADKDGDGRISFEEFCAVV 157
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREA 130
D+ E ++M +LS H +VQ+ G + ++ E A G L + + H + ++
Sbjct: 44 DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 102
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
++ K + +E S +HRDL N L + D + +DFGLS + +Y S
Sbjct: 103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSS- 158
Query: 191 VGSPY---YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
VGS + + PEVL+ + + D+W+ GV+++ + S G P+ T S + I QG
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 405 ENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEFA 462
E+L AF FD+DG G+IT+DEL++A G L + LD +++E D D DGR++Y EFA
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 463 TMMRQ 467
M+ Q
Sbjct: 66 RMLAQ 70
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 333 GGLKEL---FKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYG 389
GL++L F+ D D G IT +EL+ + +G L + E+ A++ AD+D +G + Y
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 390 EF 391
EF
Sbjct: 63 EF 64
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
+ +EI L + FK +D D SG+++ EE + L + + ++ ++D D D NG +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEV 56
Query: 387 EYGEFIAATLHLN-KMEREENLIAAFSFFDRDGSGYITIDELQQACKEF---GLGEVPLD 442
++ EFI + K ++E+ L AF +D D GYI+ EL Q K L + L
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 443 EIVKEI----DQDNDGRIDYGEFATMM 465
+IV + D+D DGRI + EF ++
Sbjct: 117 QIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREA 130
D+ E ++M +LS H +VQ+ G + ++ E A G L + + H + ++
Sbjct: 48 DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 106
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
++ K + +E S +HRDL N L + D + +DFGLS + +Y S
Sbjct: 107 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSS- 162
Query: 191 VGSPY---YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
VGS + + PEVL+ + + D+W+ GV+++ + S G P+ T S + I QG
Sbjct: 163 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 64 KLLCREDY-----DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDR 118
K+L +D+ ++ RE+ IM L HPN+V G + +V E + G L+
Sbjct: 66 KILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRL 124
Query: 119 IVAKGHYSEREAAKLIKTIVSVVEGCHSL-----GVMHRDLKPENFLFDTDGDDAKLMAT 173
+ G + + + + V +G + L ++HR+LK N L D +
Sbjct: 125 LHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK---KYTVKVC 181
Query: 174 DFGLSVFYKPGQYLS--DVVGSPYYVAPEVLLKHYGPE-IDVWSAGVILYILLSGVPPF 229
DFGLS K +LS G+P ++APEVL E DV+S GVIL+ L + P+
Sbjct: 182 DFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSV--FVHLVMELCAGGELFDRIVAKGHYSEREAAK- 132
REI ++ L +HPNV+ ++ + V L+ + A +L+ + K H + + K
Sbjct: 67 REIALLREL-KHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWH--IIKFHRASKANKKP 122
Query: 133 ------LIKTIV-SVVEGCHSL---GVMHRDLKPENFLFDTDGDD-AKLMATDFGLSVFY 181
++K+++ +++G H L V+HRDLKP N L +G + ++ D G + +
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 182 ----KPGQYLSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLSGVPPFWAETE 234
KP L VV + +Y APE+LL +HY ID+W+ G I LL+ P F E
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 330 EEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYG 389
+EI L + FK +D D SG+++ EE + L + + ++ ++D D D NG +++
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 58
Query: 390 EFIAATLHLN-KMEREENLIAAFSFFDRDGSGYITIDELQQACKEF---GLGEVPLDEIV 445
EFI + K ++E+ L AF +D D GYI+ EL Q K L + L +IV
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 446 KEI----DQDNDGRIDYGEFATMM 465
+ D+D DGRI + EF ++
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREA 130
D+ E ++M +LS H +VQ+ G + ++ E A G L + + H + ++
Sbjct: 64 DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
++ K + +E S +HRDL N L + D + +DFGLS + +Y S
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSS- 178
Query: 191 VGSPY---YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
VGS + + PEVL+ + + D+W+ GV+++ + S G P+ T S + I QG
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER 128
+ ++V +E ++ L +HPN++ ++G + LVME GG L +R+++
Sbjct: 48 QTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPD 105
Query: 129 EAAKLIKTIVSVVEGCHSL------GVMHRDLKPENFLF-----DTDGDDAKLMATDFGL 177
L+ V + G + L ++HRDLK N L + D + L TDFGL
Sbjct: 106 ---ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162
Query: 178 SVFYKPGQYLSDVVGSPYYVAPEVL-LKHYGPEIDVWSAGVILYILLSGVPPF 229
+ + +S G+ ++APEV+ + DVWS GV+L+ LL+G PF
Sbjct: 163 AREWHRTTKMS-AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREA 130
D+ E ++M +LS H +VQ+ G + ++ E A G L + + H + ++
Sbjct: 55 DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 113
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
++ K + +E S +HRDL N L + D + +DFGLS + +Y S
Sbjct: 114 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSS- 169
Query: 191 VGSPY---YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
VGS + + PEVL+ + + D+W+ GV+++ + S G P+ T S + I QG
Sbjct: 170 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 72 DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREA 130
D+ E ++M +LS H +VQ+ G + ++ E A G L + + H + ++
Sbjct: 49 DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 107
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
++ K + +E S +HRDL N L + D + +DFGLS + +Y S
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSS- 163
Query: 191 VGSPY---YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
VGS + + PEVL+ + + D+W+ GV+++ + S G P+ T S + I QG
Sbjct: 164 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 64 KLLCREDY-----DDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDR 118
K+L +D+ ++ RE+ IM L HPN+V G + +V E + G L+
Sbjct: 66 KILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRL 124
Query: 119 IVAKGHYSEREAAKLIKTIVSVVEGCHSL-----GVMHRDLKPENFLFDTDGDDAKLMAT 173
+ G + + + + V +G + L ++HRDLK N L D +
Sbjct: 125 LHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDK---KYTVKVC 181
Query: 174 DFGLSVFYKPGQYLSD--VVGSPYYVAPEVLLKHYGPE-IDVWSAGVILYILLSGVPPF 229
DFGLS K +L G+P ++APEVL E DV+S GVIL+ L + P+
Sbjct: 182 DFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 21/168 (12%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVA-KGHYSEREAAKLI 134
+E+++M L EHPNV++ G ++ + E GG L I + Y +
Sbjct: 56 KEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA 114
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY------------- 181
K I S + HS+ ++HRDL N L ++ ++ DFGL+
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 182 -KPGQYLS-DVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILLSGV 226
KP + VVG+PY++APE++ + Y ++DV+S G++L ++ V
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L EEI L+E F+ D D+ G I +L ++ +G E E+ L +++ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 387 EYGEFI--------AATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEF---G 435
++ +F+ A T + + + L AF FD +G G I+ EL++A ++
Sbjct: 65 DFDDFVELMGPKLLAETADMIGV---KELRDAFREFDTNGDGEISTSELREAMRKLLGHQ 121
Query: 436 LGEVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+G ++EI++++D + DGR+D+ EF MM
Sbjct: 122 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 318 MALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKR-VGSQLMESEIKALMD 376
M +++AE + L++ F+ DT+ G I+ EL+ +++ +G Q+ +I+ ++
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 132
Query: 377 AADIDNNGTIEYGEFI 392
D++ +G +++ EF+
Sbjct: 133 DVDLNGDGRVDFEEFV 148
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L EE+ + E F + D + G + + ELKV K +G +L + EI L+D D +
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 387 EYGEF-IAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
+Y +F I + K + + + AF FD D +G I+I L++ KE G L + L
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQS 468
++E D D DG I+ EF + S
Sbjct: 137 XIEEFDLDGDGEINENEFIAICTDS 161
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E+Q + NV+ +K + + V + M D + S +E + +
Sbjct: 69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLN 125
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL------------------- 177
+ ++ H G++HRD+KP NFL++ L+ DFGL
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALV--DFGLAQGTHDTKIELLKFVQSEA 183
Query: 178 ----------SVFYKPGQYLSDVVGSPYYVAPEVLLK--HYGPEIDVWSAGVILYILLSG 225
S+ Q ++ G+P + APEVL K + ID+WSAGVI LLSG
Sbjct: 184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243
Query: 226 VPPFWAETE 234
PF+ ++
Sbjct: 244 RYPFYKASD 252
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 329 EEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEY 388
++++ KE F++ D++ +G IT E L+ LK+ G ++ + + + AD NG I++
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 389 GEFIAATLHLNKMEREENLI-AAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIV 445
EF++ K E+++ AF FD +G+GYI LQ A G L E +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 446 KEIDQDNDGRIDYGEFATMM 465
I + G+I Y F M
Sbjct: 122 G-ITETEKGQIRYDNFINTM 140
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 107 MELCAGGELFDRIVAK-GHYSEREAA-KLIKTIVSVVEGCHSLGVMHRDLKPEN-FLFDT 163
ME C G L I + G ++ A +L + I V+ HS ++HRDLKP N FL DT
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 164 DGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE-VLLKHYGPEIDVWSAGVILYIL 222
++ DFGL K + G+ Y++PE + + YG E+D+++ G+IL L
Sbjct: 173 ----KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 223 LS------GVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRI 276
L F+ + GI I K K L++K+L + P R
Sbjct: 229 LHVCDTAFETSKFFTDLRDGIISDIFDKK--------------EKTLLQKLLSKKPEDRP 274
Query: 277 SAHEVL 282
+ E+L
Sbjct: 275 NTSEIL 280
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L EEI L+E F+ D D+ G I +L ++ +G E E+ L +++ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 387 EYGEFI--------AATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEF---G 435
++ +F+ A T + ++ L AF FD +G G I+ EL++A +
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVK---ELRDAFREFDTNGDGEISTSELREAMRALLGHQ 121
Query: 436 LGEVPLDEIVKEIDQDNDGRIDYGEFATMM 465
+G ++EI++++D + DGR+D+ EF MM
Sbjct: 122 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 318 MALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKR-VGSQLMESEIKALMD 376
M +++AE + L++ F+ DT+ G I+ EL+ ++ +G Q+ +I+ ++
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIR 132
Query: 377 AADIDNNGTIEYGEFI 392
D++ +G +++ EF+
Sbjct: 133 DVDLNGDGRVDFEEFV 148
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG+ + C+ + +A K K+ L D + RE+ L +H +VV+ + +
Sbjct: 24 FGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE 82
Query: 100 SVFVHLVMELCAGGELFDRIVAK----GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ + E C GG L D I ++ E E L+ + + HS+ ++H D+K
Sbjct: 83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK 142
Query: 156 PENFLF-----------DTDGDDAKLMATDFGLSVFYKPGQYLSDVV--GSPYYVAPEVL 202
P N + D DD F + + S V G ++A EVL
Sbjct: 143 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL 202
Query: 203 LKHYG--PEIDVWSAGVILYILLSGVPPF------WAETESGIFKQILQGKLDFESDPWP 254
++Y P+ D+++ + + + +G P W E G +I Q
Sbjct: 203 QENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ----------- 250
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCH 284
+S +L++ M+ DP RR SA ++ H
Sbjct: 251 VLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREA 130
D E IM +HPNV+ ++G S V ++ E G L D + + G ++ +
Sbjct: 80 DFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 137
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
+++ I + ++ + +HRDL N L ++ + +DFGLS ++L D
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNS---NLVCKVSDFGLS------RFLEDD 188
Query: 191 VGSPYY------------VAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESG 236
P Y APE + + + DVWS G++++ ++S G P+W T
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 248
Query: 237 IFKQILQ 243
+ I Q
Sbjct: 249 VINAIEQ 255
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG+ + C+ + +A K K+ L D + RE+ L +H +VV+ + +
Sbjct: 20 FGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE 78
Query: 100 SVFVHLVMELCAGGELFDRIVAK----GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ + E C GG L D I ++ E E L+ + + HS+ ++H D+K
Sbjct: 79 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK 138
Query: 156 PENFLF-----------DTDGDDAKLMATDFGLSVFYKPGQYLSDVV--GSPYYVAPEVL 202
P N + D DD F + + S V G ++A EVL
Sbjct: 139 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL 198
Query: 203 LKHYG--PEIDVWSAGVILYILLSGVPPF------WAETESGIFKQILQGKLDFESDPWP 254
++Y P+ D+++ + + + +G P W E G +I Q
Sbjct: 199 QENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLPRIPQ----------- 246
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCH 284
+S +L++ M+ DP RR SA ++ H
Sbjct: 247 VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG+ + C+ + +A K K+ L D + RE+ L +H +VV+ + +
Sbjct: 22 FGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE 80
Query: 100 SVFVHLVMELCAGGELFDRIVAK----GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ + E C GG L D I ++ E E L+ + + HS+ ++H D+K
Sbjct: 81 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK 140
Query: 156 PENFLF-----------DTDGDDAKLMATDFGLSVFYKPGQYLSDVV--GSPYYVAPEVL 202
P N + D DD F + + S V G ++A EVL
Sbjct: 141 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL 200
Query: 203 LKHYG--PEIDVWSAGVILYILLSGVPPF------WAETESGIFKQILQGKLDFESDPWP 254
++Y P+ D+++ + + + +G P W E G +I Q
Sbjct: 201 QENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ----------- 248
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCH 284
+S +L++ M+ DP RR SA ++ H
Sbjct: 249 VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG+ + C+ + +A K K+ L D + RE+ L +H +VV+ + +
Sbjct: 22 FGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE 80
Query: 100 SVFVHLVMELCAGGELFDRIVAK----GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLK 155
+ + E C GG L D I ++ E E L+ + + HS+ ++H D+K
Sbjct: 81 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK 140
Query: 156 PENFLF-----------DTDGDDAKLMATDFGLSVFYKPGQYLSDVV--GSPYYVAPEVL 202
P N + D DD F + + S V G ++A EVL
Sbjct: 141 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL 200
Query: 203 LKHYG--PEIDVWSAGVILYILLSGVPPF------WAETESGIFKQILQGKLDFESDPWP 254
++Y P+ D+++ + + + +G P W E G +I Q
Sbjct: 201 QENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ----------- 248
Query: 255 SISDSAKDLIRKMLERDPRRRISAHEVLCH 284
+S +L++ M+ DP RR SA ++ H
Sbjct: 249 VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREA 130
D E IM +HPN++ ++G S V +V E G L D + K G ++ +
Sbjct: 69 DFLGEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQL 126
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
+++ I + ++ +G +HRDL N L ++ + +DFGLS + L D
Sbjct: 127 VGMLRGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDD 177
Query: 191 VGSPY----------YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIF 238
+ Y + APE + + + DVWS G++++ ++S G P+W T +
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI 237
Query: 239 KQILQG 244
K + +G
Sbjct: 238 KAVEEG 243
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 51 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 109
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 110 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 165
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 226 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 261
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 52/269 (19%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE- 98
FG + H+ + K + + + + RE++ + L +H N+V G ++
Sbjct: 24 FGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKL-DHVNIVHYNGCWDG 75
Query: 99 ---------------DSVFVHLVMELCAGGELFDRIVAK-GHYSEREAA-KLIKTIVSVV 141
+ + + ME C G L I + G ++ A +L + I V
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 142 EGCHSLGVMHRDLKPEN-FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
+ HS +++RDLKP N FL DT ++ DFGL K G+ Y++PE
Sbjct: 136 DYIHSKKLINRDLKPSNIFLVDT----KQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPE 191
Query: 201 -VLLKHYGPEIDVWSAGVILYILLS------GVPPFWAETESGIFKQILQGKLDFESDPW 253
+ + YG E+D+++ G+IL LL F+ + GI I K
Sbjct: 192 QISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKK-------- 243
Query: 254 PSISDSAKDLIRKMLERDPRRRISAHEVL 282
K L++K+L + P R + E+L
Sbjct: 244 ------EKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 63 RKLLCRE--DYDDVWREIQIMHHLSEHPNVVQI-------KGTYEDSVFVHLVMELCAGG 113
+++LC E D ++ RE MH L HPN++++ +G ++ L++ G
Sbjct: 60 KRILCHEQQDREEAQREAD-MHRLFNHPNILRLVAYCLRERGAKHEAW---LLLPFFKRG 115
Query: 114 ELFD---RIVAKGHY-SEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAK 169
L++ R+ KG++ +E + L+ I +E H+ G HRDLKP N L GD+ +
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQ 172
Query: 170 LMATDFGLSVFYKPGQYLSDVVGSPY------YVAPEVLLKHYGPEI------------- 210
+ D G Q V GS + A + + PE+
Sbjct: 173 PVLMDLG-----SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERT 227
Query: 211 DVWSAGVILYILLSGVPPFWAETESG-IFKQILQGKLDFESDPWPSISDSAKDLIRKMLE 269
DVWS G +LY ++ G P+ + G +Q +L P S + L+ M+
Sbjct: 228 DVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQS--PRHSSALWQLLNSMMT 285
Query: 270 RDPRRR 275
DP +R
Sbjct: 286 VDPHQR 291
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 32/268 (11%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
F T Y + T A + RKL + + E + + L +HPN+V+ ++E
Sbjct: 39 FKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEXLKGL-QHPNIVRFYDSWES 96
Query: 100 SV----FVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVS----VVEGCHSLG--- 148
+V + LV EL G L Y +R IK + S +++G L
Sbjct: 97 TVKGKKCIVLVTELXTSGTL-------KTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 149 --VMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKHY 206
++HRDLK +N G + D GL+ K + V+G+P + APE + Y
Sbjct: 150 PPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 207 GPEIDVWSAG-VILYILLSGVPPFWAETESGIFKQILQG--KLDFESDPWPSISDSAKDL 263
+DV++ G L S P + + I++++ G F+ P + K++
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV----KEI 262
Query: 264 IRKMLERDPRRRISAHEVLCHPWIVDDT 291
I + ++ R S ++L H + ++T
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQEET 290
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 74 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 132
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 133 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 188
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 189 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 249 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 49 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 107
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 108 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 163
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 164 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 224 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 259
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM---EREENLIAAF 411
GTI++ EF+ T+ KM + EE + AF
Sbjct: 61 GTIDFPEFL--TMMARKMKDTDSEEEIREAF 89
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 48 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 106
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 107 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 162
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 163 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 223 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 258
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 46 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 104
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 105 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 160
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 161 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 221 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 46 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 104
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 105 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 160
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 161 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 221 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 21/164 (12%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
+I+ M S V Q++ + V++++ M+LC L D + + +RE +
Sbjct: 111 KIRRMDPFSTKNTVGQLQPS-SPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI 169
Query: 137 IVSV---VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL-----------SVFYK 182
+ + VE HS G+MHRDLKP N F D D K+ DFGL +V
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKV--GDFGLVTAMDQDEEEQTVLTP 226
Query: 183 PGQYLSDV--VGSPYYVAPEVLL-KHYGPEIDVWSAGVILYILL 223
Y + VG+ Y++PE + +Y ++D++S G+IL+ LL
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIV---AKGHYSEREAAK 132
+EI++M +H N+V++ G D + LV G L DR+ S K
Sbjct: 79 QEIKVMAK-CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 133 LIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSD 189
+ + + + H +HRD+K N L D + AK+ +DFGL S + S
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKI--SDFGLARASEKFAQTVMXSR 194
Query: 190 VVGSPYYVAPEVLLKHYGPEIDVWSAGVILYILLSGVP 227
+VG+ Y+APE L P+ D++S GV+L +++G+P
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 22/191 (11%)
Query: 62 KRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVA 121
+R LC E IM +HPNVV ++G V +V+E G L D +
Sbjct: 88 RRDFLC---------EASIMGQF-DHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLR 136
Query: 122 K--GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS- 178
K G ++ + +++ I + + +G +HRDL N L ++ + +DFGLS
Sbjct: 137 KHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSR 193
Query: 179 VFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAET 233
V + + G + APE + + + DVWS G++++ ++S G P+W +
Sbjct: 194 VIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
Query: 234 ESGIFKQILQG 244
+ K I +G
Sbjct: 254 NQDVIKAIEEG 264
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL + +
Sbjct: 43 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 101
Query: 123 GHYSEREAAKLIKT--IVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF 180
YS A+ ++ + + + S +HRD+ N L ++ D KL DFGLS +
Sbjct: 102 -KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSRY 157
Query: 181 YKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESG 236
+ Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 158 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
Query: 237 IFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 218 VIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 253
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSP 194
+ I S ++ +G +HRDL N L ++ + +DFGL G+ L D +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGL------GRVLEDDPEAA 204
Query: 195 Y----------YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQIL 242
Y + +PE + + + DVWS G++L+ ++S G P+W + + K +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 243 QG 244
+G
Sbjct: 265 EG 266
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGAVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM 401
GTI++ EF+ T+ KM
Sbjct: 61 GTIDFPEFL--TMMARKM 76
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM 401
GTI++ EF+ T+ KM
Sbjct: 61 GTIDFPEFL--TMMARKM 76
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM 401
GTI++ EF+ T+ KM
Sbjct: 61 GTIDFPEFL--TMMARKM 76
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 67 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGML 124
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIAATLHLNKM 401
GTI++ EF+ T+ KM
Sbjct: 61 GTIDFPEFL--TMMARKM 76
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 67 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 124
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL R +
Sbjct: 426 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL--RSFLQ 482
Query: 123 GHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV 179
+ A LI + + + S +HRD+ N L ++ D KL DFGLS
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSR 539
Query: 180 FYKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETES 235
+ + Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
Query: 236 GIFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 600 DVIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 84 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 141
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 142 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFIA 393
GTI++ EF+
Sbjct: 61 GTIDFPEFLT 70
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 384 GTIEYGEFIA 393
GTI++ EF+
Sbjct: 62 GTIDFPEFLT 71
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 398 LNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGR 455
+ + + EE LI AF FDRDG+G I+ EL+ G L + +DE+++E D D DG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 456 IDYGEFATMM 465
I+Y EF MM
Sbjct: 61 INYEEFVRMM 70
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 323 IAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDN 382
+ E+ SEEE L E FK+ D D +G I+ EL+ + +G +L + E+ ++ ADID
Sbjct: 1 MKEQDSEEE---LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 57
Query: 383 NGTIEYGEFI 392
+G I Y EF+
Sbjct: 58 DGHINYEEFV 67
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 94 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 151
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGLS + Y +
Sbjct: 152 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGEL--FDRIVAKGHYSEREA 130
D E IM +HPN+++++G +V E G L F R G ++ +
Sbjct: 96 DFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQL 153
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK--PGQYLS 188
+++ + + + LG +HRDL N L D+ + +DFGLS + P +
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 189 DVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESGIFKQILQG 244
G P + APE + + + DVWS GV+++ +L G P+W T + + +G
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGEL--FDRIVAKGHYSEREA 130
D E IM +HPN+++++G +V E G L F R G ++ +
Sbjct: 96 DFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQL 153
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK--PGQYLS 188
+++ + + + LG +HRDL N L D+ + +DFGLS + P +
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 189 DVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETESGIFKQILQG 244
G P + APE + + + DVWS GV+++ +L G P+W T + + +G
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 87 HPNVVQIKGTYEDS-----VFVHLVMELCAGGELFDRIVAKGH-YSEREAAKLIKTIVSV 140
HP++VQI E + ++VME GG+ R +KG EA + I+
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPA 194
Query: 141 VEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPE 200
+ HS+G+++ DLKPEN + + +L D G YL G+P + APE
Sbjct: 195 LSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAVSRINSFGYL---YGTPGFQAPE 247
Query: 201 VLLKHYGPEI--DVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISD 258
++ GP + D+++ G L L +P T +G + L E DP D
Sbjct: 248 IV--RTGPTVATDIYTVGRTLAALTLDLP-----TRNGRYVDGLP-----EDDPVLKTYD 295
Query: 259 SAKDLIRKMLERDPRRRISAHE 280
S L+R+ ++ DPR+R + E
Sbjct: 296 SYGRLLRRAIDPDPRQRFTTAE 317
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIV---AKGHYSEREAAK 132
+EI++M +H N+V++ G D + LV G L DR+ S K
Sbjct: 79 QEIKVMAK-CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 133 LIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSD 189
+ + + + H +HRD+K N L D + AK+ +DFGL S +
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKI--SDFGLARASEKFAQTVMXXR 194
Query: 190 VVGSPYYVAPEVLLKHYGPEIDVWSAGVILYILLSGVP 227
+VG+ Y+APE L P+ D++S GV+L +++G+P
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREAAKLI 134
E IM +HPN+++++G S V +V E G L D + K ++ + ++
Sbjct: 96 EASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGML 153
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYLSDVV 191
+ I S ++ +G +HRDL N L ++ + +DFGL+ + Y +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 192 GSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
P + +PE + + + DVWS G++L+ ++S G P+W + + K + +G
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREA 130
D E IM +HPNV+ ++G S V ++ E G L D + + G ++ +
Sbjct: 54 DFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 111
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDV 190
+++ I + ++ + +HR L N L ++ + +DFGLS ++L D
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNS---NLVCKVSDFGLS------RFLEDD 162
Query: 191 VGSPYY------------VAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESG 236
P Y APE + + + DVWS G++++ ++S G P+W T
Sbjct: 163 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 222
Query: 237 IFKQILQ 243
+ I Q
Sbjct: 223 VINAIEQ 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIV---AKGHYSEREAAK 132
+EI++M +H N+V++ G D + LV G L DR+ S K
Sbjct: 73 QEIKVMAK-CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 133 LIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSD 189
+ + + + H +HRD+K N L D + AK+ +DFGL S +
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKI--SDFGLARASEKFAQXVMXXR 188
Query: 190 VVGSPYYVAPEVLLKHYGPEIDVWSAGVILYILLSGVP 227
+VG+ Y+APE L P+ D++S GV+L +++G+P
Sbjct: 189 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL R +
Sbjct: 46 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL--RSFLQ 102
Query: 123 GHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV 179
+ A LI + + + S +HRD+ N L D KL DFGLS
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT-DCVKL--GDFGLSR 159
Query: 180 FYKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETES 235
+ + Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 236 GIFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 220 DVIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL R +
Sbjct: 426 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL--RSFLQ 482
Query: 123 GHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV 179
+ A LI + + + S +HRD+ N L D KL DFGLS
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT-DCVKL--GDFGLSR 539
Query: 180 FYKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETES 235
+ + Y G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
Query: 236 GIFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 600 DVIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
+ L+EE+I KE F + D D +G+I+ EL ++ +G E+E+ LM+ D+D N
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 384 GTIEYGEFIA 393
IE+ EF+A
Sbjct: 61 HQIEFSEFLA 70
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGL--GEVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
AF+ FD+D +G I+ EL + GL E +++++ EID D + +I++ EF +M +
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 385 TIEYGEFIAATLHLNKM 401
TI++ EF+ T+ KM
Sbjct: 62 TIDFPEFL--TMMARKM 76
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 384 GTIEYGEFIAATLHLNKM 401
GTI++ EF+ T+ KM
Sbjct: 61 GTIDFPEFL--TMMARKM 76
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D DG ID+ EF TMM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 335 LKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYGEFIAA 394
++E F++ D D G ++ EEL L+ +G +E+ + G + EF A
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKEFDLA 58
Query: 395 TLHL-------NKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIV 445
T E+ + ++ AF D++G+G I EL+Q G L ++E++
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 446 KEIDQDNDGRIDYGEFATMM 465
KE+ DG I+Y F M+
Sbjct: 119 KEVSVSGDGAINYESFVDML 138
Score = 37.7 bits (86), Expect = 0.015, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 330 EEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYG 389
E+ + + F+ +D + +GTI EL+ L +G L SE++ LM + +G I Y
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 390 EFI 392
F+
Sbjct: 133 SFV 135
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
RE + L E P+VV I E +++ L G +L + +G + A +++
Sbjct: 83 REARTAGRLQE-PHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVR 141
Query: 136 TIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQY--LSDVVGS 193
I S ++ H+ G HRD+KPEN L D D A L+ DFG++ + L + VG+
Sbjct: 142 QIGSALDAAHAAGATHRDVKPENILVSAD-DFAYLV--DFGIASATTDEKLTQLGNTVGT 198
Query: 194 PYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDP 252
YY APE + H D+++ +LY L+G PP+ + S I Q + S
Sbjct: 199 LYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQA-IPRPSTV 257
Query: 253 WPSISDSAKDLIRKMLERDPRRR 275
P I + +I + ++P R
Sbjct: 258 RPGIPVAFDAVIARGXAKNPEDR 280
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 86 EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIV---AKGHYSEREAAKLIKTIVSVVE 142
+H N+V++ G D + LV G L DR+ S K+ + + +
Sbjct: 79 QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 143 GCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQYLSDVVGSPYYVAP 199
H +HRD+K N L D + AK+ +DFGL S + S +VG+ Y AP
Sbjct: 139 FLHENHHIHRDIKSANILLD-EAFTAKI--SDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 200 EVLLKHYGPEIDVWSAGVILYILLSGVP 227
E L P+ D++S GV+L +++G+P
Sbjct: 196 EALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + + +V + C G L+ + H SE E KLI
Sbjct: 77 TRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTAR 131
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV---FYKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 26 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 84
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + A H + KL++ + +G LG +HRD
Sbjct: 85 SAGRRNLKLIMEYLPYGSLRDYLQA--HAERIDHIKLLQYTSQICKGMEYLGTKRYIHRD 142
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-HYGP 208
L N L + + ++ DFGL+ K + + SP ++ APE L + +
Sbjct: 143 LATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 209 EIDVWSAGVILYILLSGV 226
DVWS GV+LY L + +
Sbjct: 200 ASDVWSFGVVLYELFTYI 217
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 140/367 (38%), Gaps = 95/367 (25%)
Query: 9 GSTKPANTVLPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCR 68
G PA PY+ R Y F T +L N H A K + K+
Sbjct: 5 GGYHPAFKGEPYKDAR----YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVF------------------VHLVMELC 110
D EI+++ +++ N T EDS+ VH+VM
Sbjct: 61 AAED----EIKLLQRVNDADN------TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE 110
Query: 111 AGGELFDRIVAKGHYSER-----EAAKLIKTIVSVVEGCHS-LGVMHRDLKPENFLF--- 161
GE ++ K Y R ++ K ++ ++ H G++H D+KPEN L
Sbjct: 111 VLGENLLALIKK--YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV 168
Query: 162 DTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILY 220
D+ + ++ D G + +Y ++ ++ + + Y +PEVLL +G D+WS +++
Sbjct: 169 DSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF 226
Query: 221 ILLSG----------------------------VPPFWAE---------TESGIFKQILQ 243
L++G +P + G+ + I +
Sbjct: 227 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK 286
Query: 244 GKL----DFESDPWPSISDSAK---DLIRKMLERDPRRRISAHEVLCHPWIVD-----DT 291
K D ++ + D AK D + ML+ DPR+R A ++ HPW+ D +
Sbjct: 287 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346
Query: 292 VAPDKPL 298
PD+ L
Sbjct: 347 RVPDREL 353
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 140/367 (38%), Gaps = 95/367 (25%)
Query: 9 GSTKPANTVLPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCR 68
G PA PY+ R Y F T +L N H A K + K+
Sbjct: 5 GGFHPAFKGEPYKDAR----YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVF------------------VHLVMELC 110
D EI+++ +++ N T EDS+ VH+VM
Sbjct: 61 AAED----EIKLLQRVNDADN------TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE 110
Query: 111 AGGELFDRIVAKGHYSER-----EAAKLIKTIVSVVEGCHS-LGVMHRDLKPENFLF--- 161
GE ++ K Y R ++ K ++ ++ H G++H D+KPEN L
Sbjct: 111 VLGENLLALIKK--YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV 168
Query: 162 DTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLL-KHYGPEIDVWSAGVILY 220
D+ + ++ D G + +Y ++ ++ + + Y +PEVLL +G D+WS +++
Sbjct: 169 DSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF 226
Query: 221 ILLSG----------------------------VPPFWAE---------TESGIFKQILQ 243
L++G +P + G+ + I +
Sbjct: 227 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK 286
Query: 244 GKL----DFESDPWPSISDSAK---DLIRKMLERDPRRRISAHEVLCHPWIVD-----DT 291
K D ++ + D AK D + ML+ DPR+R A ++ HPW+ D +
Sbjct: 287 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346
Query: 292 VAPDKPL 298
PD+ L
Sbjct: 347 RVPDREL 353
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H SE E KLI
Sbjct: 65 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTAR 119
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + + N A KS R+ L + +E +I+ S HPN+V++ G
Sbjct: 127 FGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQ 183
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKL-IKTIVSVV-------EGCHSLGVMH 151
+++VMEL GG+ + E A+L +KT++ +V E S +H
Sbjct: 184 KQPIYIVMELVQGGDFLT-------FLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD--VVGSPY-YVAPEVL-LKHYG 207
RDL N L + L +DFG+S G Y + + P + APE L Y
Sbjct: 237 RDLAARNCLVT---EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 208 PEIDVWSAGVILYILLS-GVPPF 229
E DVWS G++L+ S G P+
Sbjct: 294 SESDVWSFGILLWETFSLGASPY 316
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 29/201 (14%)
Query: 103 VHLVMEL--CAGGELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
V + MEL + + + +++ KG E K+ +IV +E HS L V+HRD+KP N
Sbjct: 125 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVG-----------SPYYVAPEVLLKHYG 207
L + G ++ DFG+S YL D V +P + PE+ K Y
Sbjct: 185 VLINALG---QVKMCDFGIS------GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 208 PEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK--DLIR 265
+ D+WS G+ + L + F ++ F+Q+ Q ++ S P+ SA+ D
Sbjct: 236 VKSDIWSLGITMIEL--AILRFPYDSWGTPFQQLKQ-VVEEPSPQLPADKFSAEFVDFTS 292
Query: 266 KMLERDPRRRISAHEVLCHPW 286
+ L+++ + R + E++ HP+
Sbjct: 293 QCLKKNSKERPTYPELMQHPF 313
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 23 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 78
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSV-------FYK---PGQYLSDVVGSP-YYVAP 199
HRDL N L + ++ ++ DFGL+ F+K PG+ SP ++ AP
Sbjct: 137 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEFFKVKEPGE-------SPIFWYAP 186
Query: 200 EVLLK-HYGPEIDVWSAGVILYILLSGV 226
E L + + DVWS GV+LY L + +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 462 ATMM 465
MM
Sbjct: 68 VQMM 71
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G +
Sbjct: 7 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 388 YGEFI 392
Y EF+
Sbjct: 64 YEEFV 68
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H SE E KLI
Sbjct: 77 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HASETKFEMKKLIDIARQTAR 131
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV---FYKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 462 ATMM 465
MM
Sbjct: 67 VQMM 70
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G +
Sbjct: 6 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 388 YGEFI 392
Y EF+
Sbjct: 63 YEEFV 67
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 26 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 81
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 82 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + ++ ++ DFGL+ K + + SP ++ APE L +
Sbjct: 140 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 197 FSVASDVWSFGVVLYELFTYI 217
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 462 ATMM 465
MM
Sbjct: 64 VQMM 67
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G +
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 388 YGEFI 392
Y EF+
Sbjct: 60 YEEFV 64
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 462 ATMM 465
MM
Sbjct: 61 VQMM 64
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 329 EEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEY 388
EEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G + Y
Sbjct: 1 EEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 57
Query: 389 GEFI 392
EF+
Sbjct: 58 EEFV 61
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 67 CREDYDDVWREIQIMHHLS----EHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK 122
C+ D RE + L+ +HP++V++ G ++ V ++MELC GEL R +
Sbjct: 46 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL--RSFLQ 102
Query: 123 GHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV 179
+ A LI + + + S +HRD+ N L ++ D KL DFGLS
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKL--GDFGLSR 159
Query: 180 FYKPGQYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILY-ILLSGVPPFWAETES 235
+ + G P ++APE + + + DVW GV ++ IL+ GV PF +
Sbjct: 160 YMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 236 GIFKQILQGKLDFESDPW-PSISDSAKDLIRKMLERDPRRR 275
+ +I G E P P+ + L+ K DP RR
Sbjct: 220 DVIGRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 28 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 86
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + + H + KL++ + +G LG +HRD
Sbjct: 87 SAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRD 144
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-HYGP 208
L N L + ++ ++ DFGL+ K + + SP ++ APE L + +
Sbjct: 145 LATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 201
Query: 209 EIDVWSAGVILYILLSGV 226
DVWS GV+LY L + +
Sbjct: 202 ASDVWSFGVVLYELFTYI 219
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 462 ATMM 465
MM
Sbjct: 65 VQMM 68
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G +
Sbjct: 4 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 388 YGEFI 392
Y EF+
Sbjct: 61 YEEFV 65
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 325 ERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNG 384
++L+EE+I KE F + D D GTIT +EL ++ +G E+E++ +++ D D NG
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 385 TIEYGEFIAATLHLNK 400
TI++ EF+ + K
Sbjct: 62 TIDFPEFLTMMARIMK 77
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS +D+DG G IT EL + GL E L +++ E+D D +G ID+ EF TMM
Sbjct: 15 AFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 30 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 88
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + + H + KL++ + +G LG +HRD
Sbjct: 89 SAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRD 146
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-HYGP 208
L N L + ++ ++ DFGL+ K + + SP ++ APE L + +
Sbjct: 147 LATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 203
Query: 209 EIDVWSAGVILYILLSGV 226
DVWS GV+LY L + +
Sbjct: 204 ASDVWSFGVVLYELFTYI 221
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 29 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 84
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 85 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 142
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + ++ ++ DFGL+ K + + SP ++ APE L +
Sbjct: 143 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 200 FSVASDVWSFGVVLYELFTYI 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 54 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 112
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + + H + KL++ + +G LG +HRD
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRD 170
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-HYGP 208
L N L + ++ ++ DFGL+ K + + SP ++ APE L + +
Sbjct: 171 LATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 227
Query: 209 EIDVWSAGVILYILLSGV 226
DVWS GV+LY L + +
Sbjct: 228 ASDVWSFGVVLYELFTYI 245
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 462 ATMM 465
MM
Sbjct: 64 VQMM 67
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G +
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 388 YGEFI 392
Y EF+
Sbjct: 60 YEEFV 64
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 27 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 85
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + + H + KL++ + +G LG +HRD
Sbjct: 86 SAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRD 143
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-HYGP 208
L N L + + ++ DFGL+ K + + SP ++ APE L + +
Sbjct: 144 LATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 200
Query: 209 EIDVWSAGVILYILLSGV 226
DVWS GV+LY L + +
Sbjct: 201 ASDVWSFGVVLYELFTYI 218
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 405 ENLIAAFSFFDRDGSGYITIDELQQACKEFGL--GEVPLDEIVKEIDQDNDGRIDYGEFA 462
E + AF FDRDG+G+I+ EL A + G EV L+ I++ +D D DG++D+ EF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 463 TMM 465
T++
Sbjct: 96 TLL 98
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
+ E+E+ ++E FK+ D D +G I+ +EL ++ +G E E++ ++ D+D +G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 387 EYGEFIA 393
++ EF+
Sbjct: 90 DFEEFVT 96
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 23 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 81
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + + H + KL++ + +G LG +HRD
Sbjct: 82 SAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRD 139
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-HYGP 208
L N L + ++ ++ DFGL+ K + + SP ++ APE L + +
Sbjct: 140 LATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 209 EIDVWSAGVILYILLSGV 226
DVWS GV+LY L + +
Sbjct: 197 ASDVWSFGVVLYELFTYI 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 23 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 78
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + ++ ++ DFGL+ K + + SP ++ APE L +
Sbjct: 137 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 194 FSVASDVWSFGVVLYELFTYI 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREA 130
D E IM +HPN++ ++G V ++ E G L D + K G ++ +
Sbjct: 76 DFLSEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQL 133
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYL 187
+++ I S ++ + +HRDL N L ++ + +DFG+S + Y
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 188 SDVVGSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
+ P + APE + + + DVWS G++++ ++S G P+W + + K I +G
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 26 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 81
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L R + H + KL++ + +G LG +
Sbjct: 82 VCYSAGRRNLKLIMEFLPYGSL--REYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + + ++ DFGL+ K + + SP ++ APE L +
Sbjct: 140 HRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 197 FSVASDVWSFGVVLYELFTYI 217
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 302 VLSRLKHFCAMNKLKKMALRVIAERLS--EEEIGGLKELFKMIDTDESGTITFEELKVGL 359
VL+ +K + + ++ + + ++A LS I + ELF +DT+ +G+++ E+ L
Sbjct: 6 VLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVL 65
Query: 360 KRVGSQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGS 419
VG + + +I ++ A DI++ G I Y EF+A +E L AAF+ D+D
Sbjct: 66 ASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTF-LKAAFNKIDKDED 122
Query: 420 GYIT 423
GYI+
Sbjct: 123 GYIS 126
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 22 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 77
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 78 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 135
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + + ++ DFGL+ K + + SP ++ APE L +
Sbjct: 136 HRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 193 FSVASDVWSFGVVLYELFTYI 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 68 REDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKG-HYS 126
+ D +++ RE QIMH L ++P +V++ G + + LVME+ GG L +V K
Sbjct: 51 KADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIP 108
Query: 127 EREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS-VFYKPGQ 185
A+L+ + ++ +HRDL N L + AK+ +DFGLS
Sbjct: 109 VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL-VNRHYAKI--SDFGLSKALGADDS 165
Query: 186 YLSDVVGSPY---YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQ 240
Y + + + APE + + + DVWS GV ++ LS G P+ +
Sbjct: 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225
Query: 241 ILQGK 245
I QGK
Sbjct: 226 IEQGK 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 21 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 76
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 77 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 134
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + ++ ++ DFGL+ K + + SP ++ APE L +
Sbjct: 135 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 192 FSVASDVWSFGVVLYELFTYI 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 41 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 96
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 97 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + ++ ++ DFGL+ K + + SP ++ APE L +
Sbjct: 155 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 212 FSVASDVWSFGVVLYELFTYI 232
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A++L++E+I KE F + D D G IT +EL ++ +G E+E++ +++ D D N
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 384 GTIEYGEFI 392
GTI++ EF+
Sbjct: 61 GTIDFPEFL 69
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMM 465
AFS FD+DG G IT EL + G E L +++ E+D D +G ID+ EF +M
Sbjct: 15 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ +C + T A K + E D REI+I+ L +H N+V+ KG
Sbjct: 41 FGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG 96
Query: 96 TYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---M 150
+ + L+ME G L D + + H + KL++ + +G LG +
Sbjct: 97 VCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 151 HRDLKPENFLFDTDGDDAKLMATDFGLSVFY---KPGQYLSDVVGSP-YYVAPEVLLK-H 205
HRDL N L + ++ ++ DFGL+ K + + SP ++ APE L +
Sbjct: 155 HRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 206 YGPEIDVWSAGVILYILLSGV 226
+ DVWS GV+LY L + +
Sbjct: 212 FSVASDVWSFGVVLYELFTYI 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 24 FGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 78
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+++ E G L D R + S + I S +E +HRDL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS G + G+ + + APE L + + DVW
Sbjct: 139 NCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 251
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 252 SDRPSFAEI 260
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREA 130
D E IM +HPN++ ++G V ++ E G L D + K G ++ +
Sbjct: 61 DFLSEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQL 118
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYL 187
+++ I S ++ + +HRDL N L ++ + +DFG+S + Y
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 188 SDVVGSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
+ P + APE + + + DVWS G++++ ++S G P+W + + K I +G
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 103 VHLVMEL--CAGGELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPEN 158
V + MEL + + + +++ KG E K+ +IV +E HS L V+HRD+KP N
Sbjct: 81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 140
Query: 159 FLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVG----------SPYYVAPEVLLKHYGP 208
L + G ++ DFG+S G + DV +P + PE+ K Y
Sbjct: 141 VLINALG---QVKMCDFGIS-----GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSV 192
Query: 209 EIDVWSAGVILYILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK--DLIRK 266
+ D+WS G+ + L + F ++ F+Q+ Q ++ S P+ SA+ D +
Sbjct: 193 KSDIWSLGITMIEL--AILRFPYDSWGTPFQQLKQ-VVEEPSPQLPADKFSAEFVDFTSQ 249
Query: 267 MLERDPRRRISAHEVLCHPW 286
L+++ + R + E++ HP+
Sbjct: 250 CLKKNSKERPTYPELMQHPF 269
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK--GHYSEREA 130
D E IM +HPN++ ++G V ++ E G L D + K G ++ +
Sbjct: 55 DFLSEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQL 112
Query: 131 AKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYK---PGQYL 187
+++ I S ++ + +HRDL N L ++ + +DFG+S + Y
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 188 SDVVGSPY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG 244
+ P + APE + + + DVWS G++++ ++S G P+W + + K I +G
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 31/205 (15%)
Query: 40 FGTTYLCIHKTTNAHFA-CKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYE 98
FG+ +C + + ++ K + E D REI+I+ L +H N+V+ KG
Sbjct: 24 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCY 82
Query: 99 DS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGV---MHRD 153
+ + L+ME G L D + + H + KL++ + +G LG +HR+
Sbjct: 83 SAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRN 140
Query: 154 LKPENFLFDTDGDDAKLMATDFGLSV-------FYK---PGQYLSDVVGSP-YYVAPEVL 202
L N L + ++ ++ DFGL+ +YK PG+ SP ++ APE L
Sbjct: 141 LATRNILVE---NENRVKIGDFGLTKVLPQDKEYYKVKEPGE-------SPIFWYAPESL 190
Query: 203 LK-HYGPEIDVWSAGVILYILLSGV 226
+ + DVWS GV+LY L + +
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYI 215
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+ ++E F + DTD SGTI +ELKV ++ +G + + EIK ++ D D +GTI
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 387 EYGEFIAATLHLNKM 401
++ EF+ T+ KM
Sbjct: 84 DFEEFL--TMMTAKM 96
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 402 EREENLIAAFSFFDRDGSGYITIDELQQACKEFGL--GEVPLDEIVKEIDQDNDGRIDYG 459
E+++ + AF FD DGSG I EL+ A + G + + +++ EID+D G ID+
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 460 EFATMM 465
EF TMM
Sbjct: 87 EFLTMM 92
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 361 RVG-SQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGS 419
RVG ++ + EI+ D D D +GTI+ E A L ++E + S D+DGS
Sbjct: 21 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 80
Query: 420 GYITIDEL 427
G I +E
Sbjct: 81 GTIDFEEF 88
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
++++E G L D R + S + I S +E +HRDL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS Y + G+ + + APE L + + DVW
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 253
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 254 SDRPSFAEI 262
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 89 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 143
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 88 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 142
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
++++E G L D R + S + I S +E +HRDL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS Y + G+ + + APE L + + DVW
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 253
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 254 SDRPSFAEI 262
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + + +V + C G L+ + H E E KLI +
Sbjct: 61 TRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 115
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 78
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
++++E G L D R + S + I S +E +HRDL
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS G + G+ + + APE L + + DVW
Sbjct: 139 NCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 251
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 252 SDRPSFAEI 260
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH- 205
L ++H DLKPEN L + + + DFG S + GQ + + S +Y +PEVLL
Sbjct: 159 LSIIHCDLKPENILL-CNPKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 215
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
Y ID+WS G IL + +G P F E +I++
Sbjct: 216 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 253
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 78
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+++ E G L D R + S + I S +E +HRDL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS G + G+ + + APE L + + DVW
Sbjct: 139 NCLV---GENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 251
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 252 SDRPSFAEI 260
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH- 205
L ++H DLKPEN L + + + DFG S + GQ + + S +Y +PEVLL
Sbjct: 178 LSIIHCDLKPENILL-CNPKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 234
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
Y ID+WS G IL + +G P F E +I++
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A+ LSEE+I KE F + D D G IT EEL ++ + E E++ ++ D D N
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 384 GTIEYGEFIA 393
GTIE+ EF++
Sbjct: 61 GTIEFDEFLS 70
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
AF FD+DG G IT++EL + E L +++ E+D D +G I++ EF ++M +
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
++++E G L D + + + E A L+ I S +E +HRDL
Sbjct: 86 EPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 145 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 257
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 258 PSDRPSFAEI 267
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
A+ LSEE+I KE F + D D G IT EEL ++ + E E++ ++ D D N
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 384 GTIEYGEFIA 393
GTIE+ EF++
Sbjct: 61 GTIEFDEFLS 70
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLG--EVPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
AF FD+DG G IT++EL + E L +++ E+D D +G I++ EF ++M +
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+++ E G L D R + S + I S +E +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS Y + G+ + + APE L + + DVW
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 253
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 254 SDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 85
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+++ E G L D R + S + I S +E +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS Y + G+ + + APE L + + DVW
Sbjct: 146 NCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 202 AFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 258
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 259 SDRPSFAEI 267
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 66 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 120
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 66 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 120
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 63 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 117
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 61 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 115
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 89 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 143
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV---FYKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+++ E G L D R + S + I S +E +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS Y + G+ + + APE L + + DVW
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 253
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 254 SDRPSFAEI 262
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 81 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 135
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV---FYKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 136 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 142 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 254
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 255 PSDRPSFAEI 264
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 147 LGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYYVAPEVLLKH- 205
L ++H DLKPEN L A + DFG S + GQ + + S +Y +PEVLL
Sbjct: 178 LSIIHCDLKPENILLCNPKRXA-IKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 234
Query: 206 YGPEIDVWSAGVILYILLSGVPPFWAETESGIFKQILQ 243
Y ID+WS G IL + +G P F E +I++
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 145 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 257
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 258 PSDRPSFAEI 267
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 405 ENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEFA 462
E ++ AF FD D SG ITI +L++ KE G L E L E++ E D+++D ID EF
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFI 68
Query: 463 TMMRQS 468
+M+++
Sbjct: 69 RIMKKT 74
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 324 AERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNN 383
ER S EEI LK F++ D D SGTIT ++L+ K +G L E E++ ++ AD +++
Sbjct: 3 GERDSREEI--LK-AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD 59
Query: 384 GTIEYGEFI 392
I+ EFI
Sbjct: 60 NEIDEDEFI 68
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 82 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 141 RNCLV---GENHLVKVADFGLSRLMTGDTYTAP-AGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 253
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 254 PSDRPSFAEI 263
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 39 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 93
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 94 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 152
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 153 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 209 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 265
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 266 PSDRPSFAEI 275
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 68 REDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKG-HYS 126
+ D +++ RE QIMH L ++P +V++ G + + LVME+ GG L +V K
Sbjct: 377 KADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIP 434
Query: 127 EREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS--VFYKPG 184
A+L+ + ++ +HR+L N L + AK+ +DFGLS +
Sbjct: 435 VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL-VNRHYAKI--SDFGLSKALGADDS 491
Query: 185 QYLSDVVGS-PY-YVAPEVL-LKHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQ 240
Y + G P + APE + + + DVWS GV ++ LS G P+ +
Sbjct: 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551
Query: 241 ILQGK 245
I QGK
Sbjct: 552 IEQGK 556
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 142 RNCLV---GENHLVKVADFGLSRLMTGDTYTAP-AGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 254
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 255 PSDRPSFAEI 264
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 26/203 (12%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
FG + + N A KS R+ L + +E +I+ S HPN+V++ G
Sbjct: 127 FGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQ 183
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKL-IKTIVSVV-------EGCHSLGVMH 151
+++VMEL GG+ + E A+L +KT++ +V E S +H
Sbjct: 184 KQPIYIVMELVQGGDFLT-------FLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 152 RDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSD--VVGSPY-YVAPEVL-LKHYG 207
RDL N L + L +DFG+S G + + P + APE L Y
Sbjct: 237 RDLAARNCLVT---EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 208 PEIDVWSAGVILYILLS-GVPPF 229
E DVWS G++L+ S G P+
Sbjct: 294 SESDVWSFGILLWETFSLGASPY 316
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 82
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 142 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 254
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 255 PSDRPSFAEI 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 145 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 257
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 258 PSDRPSFAEI 267
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L AF FD+D +GYI+ EL+ G L + +++++KE D D DG+++Y EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 462 ATMM 465
MM
Sbjct: 68 VKMM 71
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EEE LKE FK+ D D++G I+ EL+ + +G +L + E++ ++ AD+D +G +
Sbjct: 7 AEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 388 YGEFIAATL 396
Y EF+ +
Sbjct: 64 YEEFVKMMM 72
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 81
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
++++E G L D + + + E A L+ I S +E +HRDL
Sbjct: 82 EPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS G + G+ + + APE L + + DV
Sbjct: 141 RNCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 253
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 254 PSDRPSFAEI 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 30 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 84
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 85 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 143
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 144 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 200 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 256
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 257 PSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 140 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 252
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 253 PSDRPSFAEI 262
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 31/203 (15%)
Query: 40 FGTTYLC----IHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKG 95
FG+ LC + T A A K + + D REIQI+ L +V+ +G
Sbjct: 20 FGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD-FIVKYRG 75
Query: 96 TY--EDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLG---VM 150
+ LVME G L D + + H + +A++L+ + +G LG +
Sbjct: 76 VSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSRRCV 133
Query: 151 HRDLKPENFLFDT-------DGDDAKLMATDFGLSVFYKPGQYLSDVVGSP-YYVAPEVL 202
HRDL N L ++ D AKL+ D V +PGQ SP ++ APE L
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ-------SPIFWYAPESL 186
Query: 203 LKH-YGPEIDVWSAGVILYILLS 224
+ + + DVWS GV+LY L +
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSER--EAAKLIKTIVSVVE 142
+ H N++ G Y + +V + C G L+ + H E E KLI +
Sbjct: 61 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQ 115
Query: 143 G---CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSV---FYKPGQYLSDVVGSPYY 196
G H+ ++HRDLK N +D + DFGL+ + + GS +
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 197 VAPEVLLKH----YGPEIDVWSAGVILYILLSGVPPF 229
+APEV+ Y + DV++ G++LY L++G P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKT 136
E++IM HL +H N+V + G V ++ E C G+L + + K E + A I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 137 IVS-----------VVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMATDFGLS--VF 180
+ V +G L +HRD+ N L T+G AK+ DFGL+ +
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKI--GDFGLARDIM 215
Query: 181 YKPGQYLSDVVGSPY-YVAPEVLLKH-YGPEIDVWSAGVILYILLS-GVPPF 229
+ P ++APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 140 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 252
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 253 PSDRPSFAEI 262
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 338 LFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI---EYGEFIAA 394
LFK +D + G++++EE+K + E ++ + A DID NG I E+ +F AA
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 395 TLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFGLGEVPLDEIVKEIDQDNDG 454
+ + + L + D DG G +T +E+ K+FG +V +D+I+K D + DG
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKV-VDQIMK-ADANGDG 122
Query: 455 RIDYGEF 461
I EF
Sbjct: 123 YITLEEF 129
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 312 MNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEI 371
+ + K A V + LS+E++G LK L+K++D D G +T EE+ K+ G + + +I
Sbjct: 55 LAEFTKFAAAVKEQDLSDEKVG-LKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQI 113
Query: 372 KALMDAADIDNNGTIEYGEFIAATL 396
AD + +G I EF+A L
Sbjct: 114 M----KADANGDGYITLEEFLAFNL 134
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 372 KALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQ-- 429
+AL D + +G++ Y E A ++ E+ L F D DG+G I + E +
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 430 -ACKEFGLGE--VPLDEIVKEIDQDNDGRIDYGEFATMMRQ 467
A KE L + V L + K +D D DG++ E T ++
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKK 103
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 85
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS G + G+ + + APE L + + DV
Sbjct: 145 RNCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 257
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 258 PSDRPSFAEI 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI--------------VAK 122
E++IM HL +H N+V + G V ++ E C G+L + + +A
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 123 GHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS--VF 180
S R+ + + S +HRD+ N L T+G AK+ DFGL+ +
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKI--GDFGLARDIM 215
Query: 181 YKPGQYLSDVVGSPY-YVAPEVLLKH-YGPEIDVWSAGVILYILLS-GVPPF 229
+ P ++APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF FD+DG+GYI+ +L+ G L + +DE+++E D D DG+++Y +F
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 462 ATMM 465
MM
Sbjct: 66 VQMM 69
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ +L+ + +G +L + E+ ++ ADID +G +
Sbjct: 5 SEEEI---REAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 388 YGEFI 392
Y +F+
Sbjct: 62 YEDFV 66
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L AF FD+D +GYI+ EL+ G L + +++++KE D D DG+++Y EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 462 ATMM 465
MM
Sbjct: 63 VKMM 66
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 335 LKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYGEFIAA 394
LKE FK+ D D++G I+ EL+ + +G +L + E++ ++ AD+D +G + Y EF+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Query: 395 TL 396
+
Sbjct: 66 MM 67
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 60/223 (26%)
Query: 137 IVSVVEGCHSLGVMHRDLKPENFLF-----------DTDGDDAKLMAT-----DFGLSVF 180
+ V+ H + H DLKPEN LF + D+ + +T DFG + F
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 181 YKPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETES---G 236
++ S +V + +Y APEV+L+ + DVWS G I++ G F
Sbjct: 206 --DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 237 IFKQIL------------------QGKLDFESDPWPS--ISDSAK--------------- 261
+ ++IL +G+LD++ + + ++ K
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 262 --DLIRKMLERDPRRRISAHEVLCHPWIVD-DTVAPDKPLDSA 301
DLI MLE +P +R++ E L HP+ P+K DS+
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSS 366
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGS---QLMESEIKALMDAADIDNN 383
LS+ +K++F+ ID D+SG + +ELK L++ S +L ESE K+LMDAAD D +
Sbjct: 35 LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94
Query: 384 GTIEYGEF 391
G I EF
Sbjct: 95 GKIGADEF 102
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 411 FSFFDRDGSGYITIDELQQACKEFG-----LGEVPLDEIVKEIDQDNDGRIDYGEFATMM 465
F F D D SGY+ DEL+ ++F L E ++ D D DG+I EF M+
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTY--EDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D REIQI+ L +V+ +G + LVME G L D + + H + +A
Sbjct: 70 DFQREIQILKALHSD-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDA 126
Query: 131 AKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMATDFGLS--------- 178
++L+ + +G LG +HRDL N L +++ A + DFGL+
Sbjct: 127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDY 183
Query: 179 -VFYKPGQYLSDVVGSP-YYVAPEVLLKH-YGPEIDVWSAGVILYILLS 224
V +PGQ SP ++ APE L + + + DVWS GV+LY L +
Sbjct: 184 YVVREPGQ-------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTY--EDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D REIQI+ L +V+ +G + LVME G L D + + H + +A
Sbjct: 57 DFQREIQILKALHSD-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDA 113
Query: 131 AKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDT-------DGDDAKLMATDFGLSVF 180
++L+ + +G LG +HRDL N L ++ D AKL+ D V
Sbjct: 114 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 181 YKPGQYLSDVVGSP-YYVAPEVLLKH-YGPEIDVWSAGVILYILLS 224
+PGQ SP ++ APE L + + + DVWS GV+LY L +
Sbjct: 174 REPGQ-------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 73 DVWREIQIMHHLSEHPNVVQIKGTY--EDSVFVHLVMELCAGGELFDRIVAKGHYSEREA 130
D REIQI+ L +V+ +G + LVME G L D + + H + +A
Sbjct: 58 DFQREIQILKALHSD-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDA 114
Query: 131 AKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDT-------DGDDAKLMATDFGLSVF 180
++L+ + +G LG +HRDL N L ++ D AKL+ D V
Sbjct: 115 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 181 YKPGQYLSDVVGSP-YYVAPEVLLKH-YGPEIDVWSAGVILYILLS 224
+PGQ SP ++ APE L + + + DVWS GV+LY L +
Sbjct: 175 REPGQ-------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 85 SEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRI-VAKGHYSEREAAKLIKTIVSVVEG 143
+ H N++ G Y + +V + C G L+ + V + + + + + ++
Sbjct: 89 TRHVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 144 CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVF---YKPGQYLSDVVGSPYYVAPE 200
H+ ++HRD+K N +F +G K+ DFGL+ + Q + GS ++APE
Sbjct: 148 LHAKNIIHRDMKSNN-IFLHEGLTVKI--GDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 201 VL-LKHYGP---EIDVWSAGVILYILLSGVPPF 229
V+ ++ P + DV+S G++LY L++G P+
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 65/211 (30%)
Query: 144 CHSLGVMHR------DLKPENFLF----------------DTDGDDAKLMATDFGLSVFY 181
CH+L +H DLKPEN LF + + + DFG + F
Sbjct: 165 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 223
Query: 182 KPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESG---I 237
++ + +V + +Y PEV+L+ + DVWS G IL+ G F +
Sbjct: 224 -DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 282
Query: 238 FKQIL------------------QGKLDFESD------------PWPS--ISDSAK---- 261
++IL +G L ++ + P S + DS +
Sbjct: 283 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL 342
Query: 262 -DLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
DL+R+MLE DP +RI+ E L HP+ T
Sbjct: 343 FDLMRRMLEFDPAQRITLAEALLHPFFAGLT 373
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L F FD++ GYI +DEL+ + G + E ++E++K+ D++NDGRIDY EF
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 462 ATMMRQSE 469
M+ E
Sbjct: 65 LEFMKGVE 72
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEE L +LF+M D + G I +ELK+ L+ G + E +I+ LM D +N+G I+
Sbjct: 4 SEEE---LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 388 YGEFI 392
Y EF+
Sbjct: 61 YDEFL 65
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE + AF D+DG+GYI+ EL+ G L + +DE+++E D D DG+++Y EF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 462 ATMM 465
MM
Sbjct: 88 VQMM 91
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ ++ ADID +G +
Sbjct: 27 SEEEI---REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 83
Query: 388 YGEFI 392
Y EF+
Sbjct: 84 YEEFV 88
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 65/211 (30%)
Query: 144 CHSLGVMHR------DLKPENFLF----------------DTDGDDAKLMATDFGLSVFY 181
CH+L +H DLKPEN LF + + + DFG + F
Sbjct: 142 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 200
Query: 182 KPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESG---I 237
++ + +V + +Y PEV+L+ + DVWS G IL+ G F +
Sbjct: 201 -DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 259
Query: 238 FKQIL------------------QGKLDFESD------------PWPS--ISDSAK---- 261
++IL +G L ++ + P S + DS +
Sbjct: 260 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL 319
Query: 262 -DLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
DL+R+MLE DP +RI+ E L HP+ T
Sbjct: 320 FDLMRRMLEFDPAQRITLAEALLHPFFAGLT 350
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 25/187 (13%)
Query: 114 ELFDRIVAKGH-YSEREAAKLIKTIVSVVEGCHS-LGVMHRDLKPENFLFDTDGDDAKLM 171
+ + +++ KG E K+ +IV +E HS L V+HRD+KP N L + G ++
Sbjct: 121 KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG---QVK 177
Query: 172 ATDFGLSVFYKPGQYLSDVVG----------SPYYVAPEVLLKHYGPEIDVWSAGVILYI 221
DFG+S G + DV +P + PE+ K Y + D+WS G+
Sbjct: 178 XCDFGIS-----GYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIE 232
Query: 222 LLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAK--DLIRKMLERDPRRRISAH 279
L + F ++ F+Q+ Q ++ S P+ SA+ D + L+++ + R +
Sbjct: 233 L--AILRFPYDSWGTPFQQLKQ-VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYP 289
Query: 280 EVLCHPW 286
E+ HP+
Sbjct: 290 ELXQHPF 296
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 65/211 (30%)
Query: 144 CHSLGVMHR------DLKPENFLF----------------DTDGDDAKLMATDFGLSVFY 181
CH+L +H DLKPEN LF + + + DFG + F
Sbjct: 133 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 191
Query: 182 KPGQYLSDVVGSPYYVAPEVLLK-HYGPEIDVWSAGVILYILLSGVPPFWAETESG---I 237
++ + +V + +Y PEV+L+ + DVWS G IL+ G F +
Sbjct: 192 -DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250
Query: 238 FKQIL------------------QGKLDFESD------------PWPS--ISDSAK---- 261
++IL +G L ++ + P S + DS +
Sbjct: 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL 310
Query: 262 -DLIRKMLERDPRRRISAHEVLCHPWIVDDT 291
DL+R+MLE DP +RI+ E L HP+ T
Sbjct: 311 FDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEE L +LF+M D + G I EELK+ L+ G + E +I+ LM D +N+G I+
Sbjct: 3 SEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 59
Query: 388 YGEFI 392
Y EF+
Sbjct: 60 YDEFL 64
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L F FD++ GYI ++EL+ + G + E ++E++K+ D++NDGRIDY EF
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 462 ATMMRQSE 469
M+ E
Sbjct: 64 LEFMKGVE 71
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 233 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 287
Query: 100 SVFVHLVMELCAGGELFD--RIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPE 157
+++ E G L D R + S + I S +E +HR+L
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 347
Query: 158 NFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDVW 213
N L G++ + DFGLS Y + G+ + + APE L + + DVW
Sbjct: 348 NCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 214 SAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDP 272
+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +P
Sbjct: 404 AFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWNP 460
Query: 273 RRRISAHEV 281
R S E+
Sbjct: 461 SDRPSFAEI 469
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 93/240 (38%), Gaps = 60/240 (25%)
Query: 27 DHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSE 86
D+Y +G YL K T + A K + R D + REI I++ L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRLK- 83
Query: 87 HPNVVQIKGTYEDSVFVHLVMELCAGGEL--FDRIVAKGHYSEREAAKLIKTIVSVVEG- 143
S ++ + +L +L FD + ++ + KL KT + + E
Sbjct: 84 -------------SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEH 130
Query: 144 --------------CHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFY-------- 181
H G++HRDLKP N L + D + DFGL+
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLARTINSEKDTNI 187
Query: 182 --------KPGQY-------LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLS 224
+PG + L+ V + +Y APE++L ++Y ID+WS G I LL+
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 253 WPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
+PSISD +L+ ML+ +P +RI+ + L HP++ D
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEE L +LF+M D + G I EELK+ L+ G + E +I+ LM D +N+G I+
Sbjct: 5 SEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 388 YGEFI 392
Y EF+
Sbjct: 62 YDEFL 66
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L F FD++ GYI ++EL+ + G + E ++E++K+ D++NDGRIDY EF
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 462 ATMMRQSE 469
M+ E
Sbjct: 66 LEFMKGVE 73
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 230 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 284
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HR+L
Sbjct: 285 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAA 343
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 344 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 400 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 456
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 457 PSDRPSFAEI 466
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 336 KELFKMIDTDESGTITFEELKVGLKRVG----SQLMESEIKA---LMDAADIDNNGTIEY 388
K++F + D G I + L L+ +G +QL++ I A L DA+ + +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 389 GEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVK 446
E L + E+ + AF FD++ +G +++ +L+ G L + +DE++K
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 447 EIDQDNDGRIDYGEF 461
++ D++G IDY +F
Sbjct: 127 GVEVDSNGEIDYKKF 141
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 287 IVDDTVAPDKPLDSAVLSRLKHFCAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDE 346
+V D + D L A L + ++ + L + +E+ + + F++ D +
Sbjct: 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFV----KAFQVFDKES 96
Query: 347 SGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIEYGEFIAATL 396
+G ++ +L+ L +G +L ++E+ L+ ++D+NG I+Y +FI L
Sbjct: 97 TGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L AF FD+D +G+I+ EL+ G L + +DE+++E D D DG+I+Y EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 462 ATMM 465
+M
Sbjct: 63 VKVM 66
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEE LKE F++ D D++G I+ EL+ + +G +L + E+ ++ AD+D +G I
Sbjct: 2 SEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 58
Query: 388 YGEFIAATL 396
Y EF+ +
Sbjct: 59 YEEFVKVMM 67
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 386 IEYGEFIAA-TLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLD 442
+ +G+F+ T +++ + +E ++ AF FD D +G I+ L++ KE G L + L
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 443 EIVKEIDQDNDGRIDYGEFATMMRQS 468
E++ E D+D DG + EF +M+++
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMKKT 86
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 320 LRVIAERLSEEEIGG-LKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAA 378
L V+ +++SE++ + + FK+ D DE+G I+F+ LK K +G L + E++ ++D A
Sbjct: 7 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 66
Query: 379 DIDNNGTIEYGEFI 392
D D +G + EF+
Sbjct: 67 DRDGDGEVSEQEFL 80
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 32/154 (20%)
Query: 330 EEIGGLKELFKMIDTD--ESGTITFEELKVGL--KRVGSQLMESEIKALMDAADIDNNGT 385
EE+ L ELFK + + + G I EE ++ L R L I D D+ NG
Sbjct: 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRI---FDVFDVKRNGV 90
Query: 386 IEYGEFI--------AATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQAC------ 431
IE+GEF+ +A +H E + AF +D +G+I +EL++
Sbjct: 91 IEFGEFVRSLGVFHPSAPVH-------EKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 432 KEFGLG----EVPLDEIVKEIDQDNDGRIDYGEF 461
E L EV +D+ + D+ NDG+ID E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHY-------SERE 129
E++IM HL +H N+V + G V ++ E C G+L + + K E
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 130 AAKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMATDFGLS--VFYKPG 184
L+ V +G L +HRD+ N L T+G AK+ DFGL+ +
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKI--GDFGLARDIMNDSN 215
Query: 185 QYLSDVVGSPY-YVAPEVLLKH-YGPEIDVWSAGVILYILLS-GVPPF 229
+ P ++APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 272 YGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 326
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
+++ E G L D + + + E A L+ I S +E +HR+L
Sbjct: 327 EPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAA 385
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVL-LKHYGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + DV
Sbjct: 386 RNCLV---GENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 213 WSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERD 271
W+ GV+L+ I G+ P+ S +++ + + D+ + + +L+R + +
Sbjct: 442 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRACWQWN 498
Query: 272 PRRRISAHEV 281
P R S E+
Sbjct: 499 PSDRPSFAEI 508
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 326 RLSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGT 385
+LS+ ++ LKE F MID D G I E+LK +G + E+ A++ N T
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFT 68
Query: 386 ---IEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG 435
+GE ++ T + E+ L AFS FD DG G+I D L+ + G
Sbjct: 69 AFLTLFGEKVSGT------DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EEE L +LF+M D + G I EELK+ L+ G + E +I+ LM D +N+G I+
Sbjct: 13 TEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 388 YGEFI 392
Y EF+
Sbjct: 70 YDEFL 74
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRIDYGEF 461
EE L F FD++ GYI ++EL+ + G + E ++E++K+ D++NDGRIDY EF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 462 ATMMRQSE 469
M+ E
Sbjct: 74 LEFMKGVE 81
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHY-------SERE 129
E++IM HL +H N+V + G V ++ E C G+L + + K E
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 130 AAKLIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMATDFGLS--VFYKPG 184
L+ V +G L +HRD+ N L T+G AK+ DFGL+ +
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKI--GDFGLARDIMNDSN 207
Query: 185 QYLSDVVGSPY-YVAPEVLLKH-YGPEIDVWSAGVILYILLS-GVPPF 229
+ P ++APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 77 EIQIMHHLSEHPNVVQIKGT-YEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
E +M L H N+VQ+ G E+ +++V E A G L D + ++G S L+K
Sbjct: 236 EASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLK 293
Query: 136 TIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVG 192
+ V E L +HRDL N L D + AK+ +DFGL+ K D
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSED-NVAKV--SDFGLT---KEASSTQDTGK 347
Query: 193 SPY-YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPFWAETESGIFKQILQG-KLDF 248
P + APE L K + + DVWS G++L+ + S G P+ + ++ +G K+D
Sbjct: 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA 407
Query: 249 ESDPWPSISDSAKD 262
P++ D K+
Sbjct: 408 PDGCPPAVYDVMKN 421
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
LSEE+ +KE F + DT+++G+I + ELKV ++ +G + + EI LM+ D + NG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 387 EYGEFI 392
+ +F+
Sbjct: 61 GFDDFL 66
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 364 SQLMESEIKALMDAADIDNNGTIEYGEFIAATLHLNKMEREENLIAAFSFFDRDGSGYIT 423
S+ + EIK D D + G+I+Y E A L ++ ++ + +DR+G+GYI
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 424 IDEL 427
D+
Sbjct: 62 FDDF 65
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 41/235 (17%)
Query: 24 RLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHH 83
++ D+Y +G YL K N + A K + R D + REI I++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILREITILNR 83
Query: 84 LSE------HPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTI 137
L H ++ D +++ V+E+ A +L +E+ ++ +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYI--VLEI-ADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 138 VSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLS------------------- 178
+ + H G++HRDLKP N L + D + DFGL+
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLLN---QDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 179 VFYKPGQY-------LSDVVGSPYYVAPEVLL--KHYGPEIDVWSAGVILYILLS 224
+PG + L+ V + +Y APE++L ++Y ID+WS G I LL+
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 250 SDPWPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVD 289
S + SIS DL+ ML + ++RI+ + L HP++ D
Sbjct: 333 SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 32/154 (20%)
Query: 330 EEIGGLKELFKMIDTD--ESGTITFEELKVGL--KRVGSQLMESEIKALMDAADIDNNGT 385
EE+ L ELFK + + + G I EE ++ L R L I D D+ NG
Sbjct: 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRI---FDVFDVKRNGV 90
Query: 386 IEYGEFI--------AATLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQAC------ 431
IE+GEF+ +A +H E + AF +D +G+I +EL++
Sbjct: 91 IEFGEFVRSLGVFHPSAPVH-------EKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 432 KEFGLG----EVPLDEIVKEIDQDNDGRIDYGEF 461
E L EV +D+ + D+ NDG+ID E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
+EEE L +LF+M D + G I EELK+ L+ G + E +I+ LM D +N+G I+
Sbjct: 8 TEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 388 YGEFI 392
Y EF+
Sbjct: 65 YDEFL 69
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 404 EENLIAAFSFFDRDGSGYITIDELQ---QACKEFGLGEVPLDEIVKEIDQDNDGRIDYGE 460
EE L F FD++ GYI ++EL+ QA E + E ++E++K+ D++NDGRIDY E
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGE-TITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 461 FATMMRQSE 469
F M+ E
Sbjct: 68 FLEFMKGVE 76
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 77 EIQIMHHLSEHPNVVQIKGT-YEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
E +M L H N+VQ+ G E+ +++V E A G L D + ++G S L+K
Sbjct: 64 EASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLK 121
Query: 136 TIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVG 192
+ V E L +HRDL N L D + AK+ +DFGL+ K D
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSED-NVAKV--SDFGLT---KEASSTQDTGK 175
Query: 193 SPY-YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPF 229
P + APE L K + + DVWS G++L+ + S G P+
Sbjct: 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 40 FGTTYLCIHKTTNAHFACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYED 99
+G Y+ + K + A K++ + + + ++ +E +M + +HPN+VQ+ G
Sbjct: 45 YGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTL 99
Query: 100 SVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLI---KTIVSVVEGCHSLGVMHRDLKP 156
++V E G L D + + + E A L+ I S +E +HRDL
Sbjct: 100 EPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAA 158
Query: 157 ENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLLKH-YGPEIDV 212
N L G++ + DFGLS Y + G+ + + APE L + + + DV
Sbjct: 159 RNCLV---GENHVVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 213 WSAGVILY-ILLSGVPPF 229
W+ GV+L+ I G+ P+
Sbjct: 215 WAFGVLLWEIATYGMSPY 232
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 48/263 (18%)
Query: 3 KQSSGSGSTKP-ANTVLPYQTPRLRDHYXXXXXXXXXXFGTTYLCIHKTTNAHFACKSIP 61
+Q S+KP A+ P+ ++ D Y +G K A K I
Sbjct: 28 QQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI- 86
Query: 62 KRKLLCREDYDD---VWREIQIMHHLSEHPNVVQ-----IKGTYEDSVFVHLVMELCAGG 113
L ED D + REI I++ L+ H +VV+ I E +++V+E+ A
Sbjct: 87 ---LRVFEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVLEI-ADS 141
Query: 114 ELFDRIVAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMAT 173
+ + +E L+ ++ V+ HS G++HRDLKP N L + D +
Sbjct: 142 DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVC 198
Query: 174 DFGL--SVFYKPG--------------------------QYLSDVVGSPYYVAPEVLL-- 203
DFGL +V Y + L+ V + +Y APE++L
Sbjct: 199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ 258
Query: 204 KHYGPEIDVWSAGVILYILLSGV 226
++Y IDVWS G I LL+ +
Sbjct: 259 ENYTEAIDVWSIGCIFAELLNMI 281
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 253 WPSISDSAKDLIRKMLERDPRRRISAHEVLCHPWIVDDTVA 293
+P+ S A L+++ML +P +RI+ +E L HP+ + +A
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 49/256 (19%)
Query: 56 ACKSIPKRKLLCREDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGEL 115
A K++ L R+D+ RE +++ +L +H ++V+ G D + +V E G+L
Sbjct: 49 AVKALKDPTLAARKDFQ---REAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
Query: 116 --FDRI--------------VAKGHYSEREAAKLIKTIVSVVEGCHSLGVMHRDLKPENF 159
F R AKG + + I S + S +HRDL N
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNC 164
Query: 160 LFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVGSPYY------------VAPE-VLLKHY 206
L G + + DFG+S DV + YY + PE ++ + +
Sbjct: 165 LV---GANLLVKIGDFGMS---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF 212
Query: 207 GPEIDVWSAGVILY-ILLSGVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIR 265
E DVWS GVIL+ I G P++ + + + + I QG++ P D++
Sbjct: 213 TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---EVYDVML 269
Query: 266 KMLERDPRRRISAHEV 281
+R+P++R++ E+
Sbjct: 270 GCWQREPQQRLNIKEI 285
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 77 EIQIMHHLSEHPNVVQIKGT-YEDSVFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIK 135
E +M L H N+VQ+ G E+ +++V E A G L D + ++G S L+K
Sbjct: 49 EASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLK 106
Query: 136 TIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVVG 192
+ V E L +HRDL N L D + AK+ +DFGL+ K D
Sbjct: 107 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSED-NVAKV--SDFGLT---KEASSTQDTGK 160
Query: 193 SPY-YVAPEVLL-KHYGPEIDVWSAGVILYILLS-GVPPF 229
P + APE L K + + DVWS G++L+ + S G P+
Sbjct: 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 60 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 119
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 120 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 176
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 236
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 237 PYPGVPVEELFKLLKEG 253
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
+ +I KE F MID + G I E+L L +G + ++ +M A G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPI 56
Query: 387 EYGEFIAA-TLHLNKMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDE 443
+ F+ LN + E+ + AF+ FD + SG+I D L++ G + +DE
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 444 IVKEIDQDNDGRIDYGEFATMMRQ 467
+ +E D G +Y EF +++
Sbjct: 117 MYREAPIDKKGNFNYVEFTRILKH 140
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 410 AFSFFDRDGSGYITIDELQQACKEFGLGEVPLDEIVKEIDQDNDGRIDYGEFATMMRQSE 469
AF+ D++ G+I ++L +G+ P DE ++ + + G I++ F TM +
Sbjct: 12 AFNMIDQNRDGFIDKEDLHDMLA--SMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKL 69
Query: 470 GGVGKSRTMRNSL 482
G +RN+
Sbjct: 70 NGTDPEDVIRNAF 82
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 64 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 123
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 180
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 181 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 240
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 241 PYPGVPVEELFKLLKEG 257
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 67 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 126
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 183
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 184 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 243
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 244 PYPGVPVEELFKLLKEG 260
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 75 WR-EIQIMHHLSEHPNVVQIKGTYEDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAA 131
W+ EI I+ L H ++++ KG ED+ + LVME G L D Y R +
Sbjct: 80 WKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSI 131
Query: 132 KLIKTIVSVVEGC------HSLGVMHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQ 185
L + ++ + C H+ +HRDL N L D +D + DFGL+ G
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAVPEGH 188
Query: 186 YLSDVV---GSP-YYVAPEVLLKH-YGPEIDVWSAGVILYILLS 224
V SP ++ APE L ++ + DVWS GV LY LL+
Sbjct: 189 EXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 191
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 252 PYPGVPVEELFKLLKEG 268
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLE 134
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 191
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 252 PYPGVPVEELFKLLKEG 268
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 34/162 (20%)
Query: 336 KELFKMIDTDESGTITFEEL----------KVGLKRVGSQLMESEIKALMDAADIDNNGT 385
K +F +D + +G IT +E+ K+G +Q + ++A +D
Sbjct: 26 KFMFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKE 85
Query: 386 IEYGEFIAATLHLNK------MEREENLI-----AAFSFFDRDGSGYITIDELQQACKEF 434
+E+ F+ L K + +++LI A F FD+DGSG I++DE K +
Sbjct: 86 VEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEW----KTY 141
Query: 435 G--LGEVPLDE----IVKEIDQDNDGRIDYGEFATMMRQSEG 470
G G P DE K D DN G++D E M RQ G
Sbjct: 142 GGISGICPSDEDAEKTFKHCDLDNSGKLDVDE---MTRQHLG 180
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK-----------GHY 125
E++IM HL +H N+V + G V ++ E C G+L + + K H
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 126 SEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMATDFGLS-- 178
E + + L+ V +G L +HRD+ N L T+G AK+ DFGL+
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKI--GDFGLARD 215
Query: 179 VFYKPGQYLSDVVGSPY-YVAPEVLLKH-YGPEIDVWSAGVILYILLS-GVPPF 229
+ + P ++APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 68 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 127
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 128 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 184
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 185 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 244
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 245 PYPGVPVEELFKLLKEG 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 116 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 175
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 176 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 232
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 293 PYPGVPVEELFKLLKEG 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 69 EDYDDVWREIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAK------ 122
+D D+ E+++M + +H N++ + G +++++E + G L + + A+
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 123 -----GHYSEREAAK--LIKTIVSVVEGCHSLG---VMHRDLKPENFLFDTDGDDAKLMA 172
H E + + L+ V G L +HRDL N L +D +
Sbjct: 135 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKI 191
Query: 173 TDFGLSVFYKPGQYLSDVVGSPY---YVAPEVLL-KHYGPEIDVWSAGVILY-ILLSGVP 227
DFGL+ Y ++APE L + Y + DVWS GV+L+ I G
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 228 PFWAETESGIFKQILQG 244
P+ +FK + +G
Sbjct: 252 PYPGVPVEELFKLLKEG 268
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 369 SEIKALMDAADIDNNGTIEYGEFIAATLHLNKM---EREENLIAAFSFFDRDGSGYITID 425
+E++ +++ D D NGTI++ EF+ T+ KM + EE + AF FD+DG+GYI+
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 58
Query: 426 ELQQACKEFG 435
EL+ G
Sbjct: 59 ELRHVMTNLG 68
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 441 LDEIVKEIDQDNDGRIDYGEFATMM 465
L +++ E+D D +G ID+ EF TMM
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMM 27
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 400 KMEREENLIAAFSFFDRDGSGYITIDELQQACKEFG--LGEVPLDEIVKEIDQDNDGRID 457
K + EE L F FD++ G+I I+EL + + G + E +++++K+ D++NDGRID
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 64
Query: 458 YGEFATMM 465
+ EF MM
Sbjct: 65 FDEFLKMM 72
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 328 SEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTIE 387
SEEE L F++ D + G I EEL L+ G ++E +I+ LM +D +N+G I+
Sbjct: 8 SEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 64
Query: 388 YGEFI 392
+ EF+
Sbjct: 65 FDEFL 69
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGS---QLMESEIKALMDAADIDNN 383
LS+ +K++F+ ID D+SG + EELK L++ S +L ESE K+LM AAD D +
Sbjct: 36 LSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
Query: 384 GTIEYGEF 391
G I EF
Sbjct: 96 GKIGAEEF 103
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 411 FSFFDRDGSGYITIDELQQACKEFGLGEVPLDE-----IVKEIDQDNDGRIDYGEFATMM 465
F F D D SGY+ +EL+ ++F G L E ++ D D DG+I EF M+
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 402 EREENLIAAFSFFDRDGSGYITIDELQQACKEFGL--GEVPLDEIVKEIDQDNDGRIDYG 459
E+++ + AF FD DG+G I + EL+ A + G + + +++ EID++ G++++G
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 460 EFATMMRQ 467
+F T+M Q
Sbjct: 88 DFLTVMTQ 95
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 327 LSEEEIGGLKELFKMIDTDESGTITFEELKVGLKRVGSQLMESEIKALMDAADIDNNGTI 386
L+EE+ ++E F + D D +GTI +ELKV ++ +G + + EIK ++ D + G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 387 EYGEFIAATLHLNKM 401
+G+F+ T+ KM
Sbjct: 85 NFGDFL--TVMTQKM 97
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 26/200 (13%)
Query: 40 FGTTYL-CIHKTTNAHFACKSIPKRKLLCREDYDDVWR-EIQIMHHLSEHPNVVQIKGTY 97
FG L C T + ++ K C + W+ EI I+ L H ++++ KG
Sbjct: 27 FGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY-HEHIIKYKGCC 85
Query: 98 EDS--VFVHLVMELCAGGELFDRIVAKGHYSEREAAKLIKTIVSVVEGC------HSLGV 149
ED + LVME G L D Y R + L + ++ + C HS
Sbjct: 86 EDQGEKSLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 150 MHRDLKPENFLFDTDGDDAKLMATDFGLSVFYKPGQYLSDVV---GSP-YYVAPEVLLKH 205
+HR+L N L D +D + DFGL+ G V SP ++ APE L ++
Sbjct: 139 IHRNLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 206 -YGPEIDVWSAGVILYILLS 224
+ DVWS GV LY LL+
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 76 REIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIV-AKGHYSEREAAKLI 134
RE+ + + + H NVV G + ++ LC G L+ + AK + ++
Sbjct: 78 REV-MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA 136
Query: 135 KTIVSVVEGCHSLGVMHRDLKPENFLFDTDGDDAKLMATDFGL---SVFYKPGQY---LS 188
+ IV + H+ G++H+DLK +N + D+ K++ TDFGL S + G+ L
Sbjct: 137 QEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLR 192
Query: 189 DVVGSPYYVAPEVLLKHYGPEI-----------DVWSAGVILYILLSGVPPFWAETESGI 237
G ++APE+ ++ P+ DV++ G I Y L + PF + I
Sbjct: 193 IQNGWLCHLAPEI-IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251
Query: 238 FKQILQG 244
Q+ G
Sbjct: 252 IWQMGTG 258
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 51/238 (21%)
Query: 77 EIQIMHHLSEHPNVVQIKGTYEDSVFVHLVMELCAGGELFDRIVAKGH-YSEREA----- 130
E+++M L H N+V + G S ++L+ E C G+L + + +K +SE E
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 131 --------------AKLIKTIVSVVEGCHSL---GVMHRDLKPENFLFDTDGDDAKLMAT 173
L+ V +G L +HRDL N L T G K+
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKI--C 214
Query: 174 DFGLSVFYKPGQYLSDVVGSPYYV------------APEVLLKH-YGPEIDVWSAGVILY 220
DFGL+ D++ YV APE L + Y + DVWS G++L+
Sbjct: 215 DFGLA---------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 221 ILLS-GVPPFWAETESGIFKQILQGKLDFESDPWPSISDSAKDLIRKMLERDPRRRIS 277
+ S GV P+ F +++Q F+ D ++ +++ D R+R S
Sbjct: 266 EIFSLGVNPYPGIPVDANFYKLIQN--GFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,468,284
Number of Sequences: 62578
Number of extensions: 672169
Number of successful extensions: 5888
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 1869
Number of HSP's gapped (non-prelim): 1955
length of query: 500
length of database: 14,973,337
effective HSP length: 103
effective length of query: 397
effective length of database: 8,527,803
effective search space: 3385537791
effective search space used: 3385537791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)